data_7WII # _entry.id 7WII # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7WII pdb_00007wii 10.2210/pdb7wii/pdb WWPDB D_1300026767 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7WII _pdbx_database_status.recvd_initial_deposition_date 2022-01-03 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Xu, L.' 1 0000-0003-1584-2772 'Fang, X.' 2 0000-0001-9432-9736 'Xiao, Y.' 3 0000-0003-2518-9594 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 51 _citation.language ? _citation.page_first 952 _citation.page_last 965 _citation.title 'Structural insights into translation regulation by the THF-II riboswitch.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkac1257 _citation.pdbx_database_id_PubMed 36620887 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Xu, L.' 1 ? primary 'Xiao, Y.' 2 ? primary 'Zhang, J.' 3 ? primary 'Fang, X.' 4 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 7WII _cell.details ? _cell.formula_units_Z ? _cell.length_a 66.605 _cell.length_a_esd ? _cell.length_b 66.605 _cell.length_b_esd ? _cell.length_c 93.060 _cell.length_c_esd ? _cell.volume 357525.765 _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 7WII _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ;P 31 2" ; _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RNA (50-MER)' 16287.591 1 ? ? ? ? 2 non-polymer syn '2-AMINO-7,8-DIHYDRO-6-(1,2,3-TRIHYDROXYPROPYL)-4(1H)-PTERIDINONE' 255.231 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(GTP)GCGUGGUCCGUUCAACUCGUUCCUCGAAAGAGGAACUACGGGAGACGCC' _entity_poly.pdbx_seq_one_letter_code_can GGCGUGGUCCGUUCAACUCGUUCCUCGAAAGAGGAACUACGGGAGACGCC _entity_poly.pdbx_strand_id V _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GTP n 1 2 G n 1 3 C n 1 4 G n 1 5 U n 1 6 G n 1 7 G n 1 8 U n 1 9 C n 1 10 C n 1 11 G n 1 12 U n 1 13 U n 1 14 C n 1 15 A n 1 16 A n 1 17 C n 1 18 U n 1 19 C n 1 20 G n 1 21 U n 1 22 U n 1 23 C n 1 24 C n 1 25 U n 1 26 C n 1 27 G n 1 28 A n 1 29 A n 1 30 A n 1 31 G n 1 32 A n 1 33 G n 1 34 G n 1 35 A n 1 36 A n 1 37 C n 1 38 U n 1 39 A n 1 40 C n 1 41 G n 1 42 G n 1 43 G n 1 44 A n 1 45 G n 1 46 A n 1 47 C n 1 48 G n 1 49 C n 1 50 C n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 50 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mesorhizobium loti' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 381 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'in vitro transcription vector pT7-TP(deltai)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 905931 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 7WII _struct_ref.pdbx_db_accession 7WII _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7WII _struct_ref_seq.pdbx_strand_id V _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 50 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 7WII _struct_ref_seq.db_align_beg 6 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 56 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 6 _struct_ref_seq.pdbx_auth_seq_align_end 56 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 NPR non-polymer . '2-AMINO-7,8-DIHYDRO-6-(1,2,3-TRIHYDROXYPROPYL)-4(1H)-PTERIDINONE' 7,8-DIHYDRONEOPTERIN 'C9 H13 N5 O4' 255.231 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7WII _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.68 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 66.54 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100mM sodium citrate pH6.5, 1.5-2.5M Ammonium Sulfate' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 291 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-07-22 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL19U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL19U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate 88.67 _reflns.entry_id 7WII _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.75 _reflns.d_resolution_low 50.00 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 6580 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 9.3 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.0 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.033 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.095 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 111627 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.975 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.092 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 2.75 2.80 ? ? ? ? ? ? 624 ? ? ? ? ? ? ? ? ? ? ? 10.3 0.960 ? ? ? ? ? 1 1 ? ? ? 100.0 ? 0.927 ? ? ? ? ? ? ? ? ? 2.80 2.85 ? ? ? ? ? ? 585 ? ? ? ? ? ? ? ? ? ? ? 10.5 1.000 ? ? ? ? ? 2 1 ? ? ? 100.0 ? 0.869 ? ? ? ? ? ? ? ? ? 2.85 2.90 ? ? ? ? ? ? 615 ? ? ? ? ? ? ? ? ? ? ? 10.4 1.123 ? ? ? ? ? 3 1 ? ? ? 100.0 ? 0.641 ? ? ? ? ? ? ? ? ? 2.90 2.96 ? ? ? ? ? ? 581 ? ? ? ? ? ? ? ? ? ? ? 10.2 1.233 ? ? ? ? ? 4 1 ? ? ? 100.0 ? 0.429 ? ? ? ? ? ? ? ? ? 2.96 3.03 ? ? ? ? ? ? 627 ? ? ? ? ? ? ? ? ? ? ? 9.9 1.183 ? ? ? ? ? 5 1 ? ? ? 100.0 ? 0.287 ? ? ? ? ? ? ? ? ? 3.03 3.10 ? ? ? ? ? ? 579 ? ? ? ? ? ? ? ? ? ? ? 9.3 1.184 ? ? ? ? ? 6 1 ? ? ? 100.0 ? 0.219 ? ? ? ? ? ? ? ? ? 3.10 3.17 ? ? ? ? ? ? 611 ? ? ? ? ? ? ? ? ? ? ? 9.4 1.242 ? ? ? ? ? 7 1 ? ? ? 100.0 ? 0.200 ? ? ? ? ? ? ? ? ? 3.17 3.26 ? ? ? ? ? ? 596 ? ? ? ? ? ? ? ? ? ? ? 9.7 1.272 ? ? ? ? ? 8 1 ? ? ? 100.0 ? 0.171 ? ? ? ? ? ? ? ? ? 3.26 3.36 ? ? ? ? ? ? 601 ? ? ? ? ? ? ? ? ? ? ? 9.6 1.135 ? ? ? ? ? 9 1 ? ? ? 100.0 ? 0.136 ? ? ? ? ? ? ? ? ? 3.36 3.46 ? ? ? ? ? ? 612 ? ? ? ? ? ? ? ? ? ? ? 9.7 1.178 ? ? ? ? ? 10 1 ? ? ? 100.0 ? 0.139 ? ? ? ? ? ? ? ? ? 3.46 3.59 ? ? ? ? ? ? 591 ? ? ? ? ? ? ? ? ? ? ? 9.6 1.167 ? ? ? ? ? 11 1 ? ? ? 100.0 ? 0.141 ? ? ? ? ? ? ? ? ? 3.59 3.73 ? ? ? ? ? ? 600 ? ? ? ? ? ? ? ? ? ? ? 9.1 1.110 ? ? ? ? ? 12 1 ? ? ? 100.0 ? 0.115 ? ? ? ? ? ? ? ? ? 3.73 3.90 ? ? ? ? ? ? 608 ? ? ? ? ? ? ? ? ? ? ? 8.6 1.137 ? ? ? ? ? 13 1 ? ? ? 100.0 ? 0.109 ? ? ? ? ? ? ? ? ? 3.90 4.11 ? ? ? ? ? ? 601 ? ? ? ? ? ? ? ? ? ? ? 8.2 1.040 ? ? ? ? ? 14 1 ? ? ? 100.0 ? 0.104 ? ? ? ? ? ? ? ? ? 4.11 4.36 ? ? ? ? ? ? 600 ? ? ? ? ? ? ? ? ? ? ? 8.2 0.885 ? ? ? ? ? 15 1 ? ? ? 100.0 ? 0.096 ? ? ? ? ? ? ? ? ? 4.36 4.70 ? ? ? ? ? ? 595 ? ? ? ? ? ? ? ? ? ? ? 8.7 0.827 ? ? ? ? ? 16 1 ? ? ? 100.0 ? 0.093 ? ? ? ? ? ? ? ? ? 4.70 5.17 ? ? ? ? ? ? 606 ? ? ? ? ? ? ? ? ? ? ? 8.6 1.106 ? ? ? ? ? 17 1 ? ? ? 99.8 ? 0.090 ? ? ? ? ? ? ? ? ? 5.17 5.92 ? ? ? ? ? ? 598 ? ? ? ? ? ? ? ? ? ? ? 8.1 0.971 ? ? ? ? ? 18 1 ? ? ? 100.0 ? 0.082 ? ? ? ? ? ? ? ? ? 5.92 7.46 ? ? ? ? ? ? 611 ? ? ? ? ? ? ? ? ? ? ? 8.7 1.147 ? ? ? ? ? 19 1 ? ? ? 100.0 ? 0.080 ? ? ? ? ? ? ? ? ? 7.46 50.00 ? ? ? ? ? ? 614 ? ? ? ? ? ? ? ? ? ? ? 8.3 0.934 ? ? ? ? ? 20 1 ? ? ? 99.8 ? 0.068 ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 98.52 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7WII _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.75 _refine.ls_d_res_low 33.30 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 6473 _refine.ls_number_reflns_R_free 641 _refine.ls_number_reflns_R_work 5832 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.73 _refine.ls_percent_reflns_R_free 9.90 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2061 _refine.ls_R_factor_R_free 0.2376 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2029 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 7WI9 _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 37.4707 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2973 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.75 _refine_hist.d_res_low 33.30 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1097 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1079 _refine_hist.pdbx_number_atoms_ligand 18 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0009 ? 1224 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.3646 ? 1907 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0184 ? 254 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0011 ? 51 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 11.6563 ? 616 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.75 2.96 . . 127 1099 96.16 . . . . 0.4245 . . . . . . . . . . . 0.3711 'X-RAY DIFFRACTION' 2.96 3.26 . . 126 1140 98.52 . . . . 0.2656 . . . . . . . . . . . 0.3004 'X-RAY DIFFRACTION' 3.26 3.73 . . 123 1164 99.69 . . . . 0.2355 . . . . . . . . . . . 0.2656 'X-RAY DIFFRACTION' 3.73 4.69 . . 129 1178 99.69 . . . . 0.2194 . . . . . . . . . . . 0.2462 'X-RAY DIFFRACTION' 4.70 33.30 . . 136 1251 99.64 . . . . 0.1597 . . . . . . . . . . . 0.2044 # _struct.entry_id 7WII _struct.title 'The THF-II riboswitch bound to NPR' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7WII _struct_keywords.text 'THF-II riboswitch, NPR, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GTP 1 "O3'" ? ? ? 1_555 A G 2 P ? ? V GTP 6 V G 7 1_555 ? ? ? ? ? ? ? 1.599 ? ? hydrog1 hydrog ? ? A GTP 1 N1 ? ? ? 1_555 A C 50 N3 ? ? V GTP 6 V C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A GTP 1 N2 ? ? ? 1_555 A C 50 O2 ? ? V GTP 6 V C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A GTP 1 O6 ? ? ? 1_555 A C 50 N4 ? ? V GTP 6 V C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 49 N3 ? ? V G 7 V C 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 49 O2 ? ? V G 7 V C 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 49 N4 ? ? V G 7 V C 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 48 N1 ? ? V C 8 V G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 48 O6 ? ? V C 8 V G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 48 N2 ? ? V C 8 V G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 N1 ? ? ? 1_555 A C 47 N3 ? ? V G 9 V C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 4 N2 ? ? ? 1_555 A C 47 O2 ? ? V G 9 V C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 4 O6 ? ? ? 1_555 A C 47 N4 ? ? V G 9 V C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A U 5 N3 ? ? ? 1_555 A A 46 N1 ? ? V U 10 V A 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A U 5 O4 ? ? ? 1_555 A A 46 N6 ? ? V U 10 V A 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 6 N7 ? ? ? 1_555 A G 45 N2 ? ? V G 11 V G 51 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A G 6 O6 ? ? ? 1_555 A G 45 N1 ? ? V G 11 V G 51 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A G 7 N1 ? ? ? 1_555 A A 44 N1 ? ? V G 12 V A 50 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog18 hydrog ? ? A G 7 O6 ? ? ? 1_555 A A 44 N6 ? ? V G 12 V A 50 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog19 hydrog ? ? A U 8 N3 ? ? ? 1_555 A G 43 O6 ? ? V U 13 V G 49 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog20 hydrog ? ? A U 8 O2 ? ? ? 1_555 A G 43 N1 ? ? V U 13 V G 49 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog21 hydrog ? ? A C 9 N3 ? ? ? 1_555 A G 42 N1 ? ? V C 14 V G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 9 N4 ? ? ? 1_555 A G 42 O6 ? ? V C 14 V G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A C 9 O2 ? ? ? 1_555 A G 42 N2 ? ? V C 14 V G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A C 10 N3 ? ? ? 1_555 A G 41 N1 ? ? V C 15 V G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C 10 N4 ? ? ? 1_555 A G 41 O6 ? ? V C 15 V G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A C 10 O2 ? ? ? 1_555 A G 41 N2 ? ? V C 15 V G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 11 N1 ? ? ? 1_555 A C 40 N3 ? ? V G 16 V C 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 11 N2 ? ? ? 1_555 A C 40 O2 ? ? V G 16 V C 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 11 O6 ? ? ? 1_555 A C 40 N4 ? ? V G 16 V C 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A U 12 O2 ? ? ? 1_555 A A 15 N6 ? ? V U 17 V A 20 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog31 hydrog ? ? A U 12 N3 ? ? ? 1_555 A A 39 N1 ? ? V U 17 V A 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A U 12 O4 ? ? ? 1_555 A A 39 N6 ? ? V U 17 V A 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A A 15 N6 ? ? ? 1_555 A C 40 O2 ? ? V A 20 V C 46 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog34 hydrog ? ? A A 16 N6 ? ? ? 1_555 A A 39 N3 ? ? V A 21 V A 45 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog35 hydrog ? ? A G 20 N1 ? ? ? 1_555 A C 37 N3 ? ? V G 25 V C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 20 N2 ? ? ? 1_555 A C 37 O2 ? ? V G 25 V C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A G 20 O6 ? ? ? 1_555 A C 37 N4 ? ? V G 25 V C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A U 21 N3 ? ? ? 1_555 A A 36 N1 ? ? V U 26 V A 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A U 21 O4 ? ? ? 1_555 A A 36 N6 ? ? V U 26 V A 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A U 22 N3 ? ? ? 1_555 A A 35 N1 ? ? V U 27 V A 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A U 22 O4 ? ? ? 1_555 A A 35 N6 ? ? V U 27 V A 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A C 23 N3 ? ? ? 1_555 A G 34 N1 ? ? V C 28 V G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A C 23 N4 ? ? ? 1_555 A G 34 O6 ? ? V C 28 V G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A C 23 O2 ? ? ? 1_555 A G 34 N2 ? ? V C 28 V G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A C 24 N3 ? ? ? 1_555 A G 33 N1 ? ? V C 29 V G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A C 24 N4 ? ? ? 1_555 A G 33 O6 ? ? V C 29 V G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A C 24 O2 ? ? ? 1_555 A G 33 N2 ? ? V C 29 V G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A U 25 N3 ? ? ? 1_555 A A 32 N1 ? ? V U 30 V A 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A U 25 O4 ? ? ? 1_555 A A 32 N6 ? ? V U 30 V A 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A C 26 N3 ? ? ? 1_555 A G 31 N1 ? ? V C 31 V G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A C 26 N4 ? ? ? 1_555 A G 31 O6 ? ? V C 31 V G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A C 26 O2 ? ? ? 1_555 A G 31 N2 ? ? V C 31 V G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A G 27 N2 ? ? ? 1_555 A A 30 N7 ? ? V G 32 V A 35 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _atom_sites.entry_id 7WII _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.015014 _atom_sites.fract_transf_matrix[1][2] 0.008668 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017337 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010746 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GTP 1 6 6 GTP GTP V . n A 1 2 G 2 7 7 G G V . n A 1 3 C 3 8 8 C C V . n A 1 4 G 4 9 9 G G V . n A 1 5 U 5 10 10 U U V . n A 1 6 G 6 11 11 G G V . n A 1 7 G 7 12 12 G G V . n A 1 8 U 8 13 13 U U V . n A 1 9 C 9 14 14 C C V . n A 1 10 C 10 15 15 C C V . n A 1 11 G 11 16 16 G G V . n A 1 12 U 12 17 17 U U V . n A 1 13 U 13 18 18 U U V . n A 1 14 C 14 19 19 C C V . n A 1 15 A 15 20 20 A A V . n A 1 16 A 16 21 21 A A V . n A 1 17 C 17 22 22 C C V . n A 1 18 U 18 23 23 U U V . n A 1 19 C 19 24 24 C C V . n A 1 20 G 20 25 25 G G V . n A 1 21 U 21 26 26 U U V . n A 1 22 U 22 27 27 U U V . n A 1 23 C 23 28 28 C C V . n A 1 24 C 24 29 29 C C V . n A 1 25 U 25 30 30 U U V . n A 1 26 C 26 31 31 C C V . n A 1 27 G 27 32 32 G G V . n A 1 28 A 28 33 33 A A V . n A 1 29 A 29 34 34 A A V . n A 1 30 A 30 35 35 A A V . n A 1 31 G 31 37 37 G G V . n A 1 32 A 32 38 38 A A V . n A 1 33 G 33 39 39 G G V . n A 1 34 G 34 40 40 G G V . n A 1 35 A 35 41 41 A A V . n A 1 36 A 36 42 42 A A V . n A 1 37 C 37 43 43 C C V . n A 1 38 U 38 44 44 U U V . n A 1 39 A 39 45 45 A A V . n A 1 40 C 40 46 46 C C V . n A 1 41 G 41 47 47 G G V . n A 1 42 G 42 48 48 G G V . n A 1 43 G 43 49 49 G G V . n A 1 44 A 44 50 50 A A V . n A 1 45 G 45 51 51 G G V . n A 1 46 A 46 52 52 A A V . n A 1 47 C 47 53 53 C C V . n A 1 48 G 48 54 54 G G V . n A 1 49 C 49 55 55 C C V . n A 1 50 C 50 56 56 C C V . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email fangxy@mail.tsinghua.edu.cn _pdbx_contact_author.name_first Xianyang _pdbx_contact_author.name_last Fang _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-9432-9736 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id NPR _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 101 _pdbx_nonpoly_scheme.auth_seq_num 101 _pdbx_nonpoly_scheme.pdb_mon_id NPR _pdbx_nonpoly_scheme.auth_mon_id NPR _pdbx_nonpoly_scheme.pdb_strand_id V _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 750 ? 1 MORE -2 ? 1 'SSA (A^2)' 9030 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-01-18 2 'Structure model' 1 1 2023-02-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation_author.identifier_ORCID' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17.1_3660 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? AutoSol ? ? ? . 5 # _pdbx_entry_details.entry_id 7WII _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag N _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 0 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id V _pdbx_unobs_or_zero_occ_atoms.auth_comp_id NPR _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 101 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id C17 _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id B _pdbx_unobs_or_zero_occ_atoms.label_comp_id NPR _pdbx_unobs_or_zero_occ_atoms.label_seq_id ? _pdbx_unobs_or_zero_occ_atoms.label_atom_id C17 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 7WII 'double helix' 7WII 'a-form double helix' 7WII 'hairpin loop' 7WII tetraloop 7WII 'mismatched base pair' 7WII 'internal loop' 7WII 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A GTP 1 1_555 A C 50 1_555 -1.222 -0.144 0.310 -3.478 -11.401 2.372 1 V_GTP6:C56_V V 6 ? V 56 ? 19 1 1 A G 2 1_555 A C 49 1_555 -1.088 -0.202 0.084 -2.651 -9.597 5.072 2 V_G7:C55_V V 7 ? V 55 ? 19 1 1 A C 3 1_555 A G 48 1_555 -0.138 0.008 -0.090 3.595 -7.164 3.832 3 V_C8:G54_V V 8 ? V 54 ? 19 1 1 A G 4 1_555 A C 47 1_555 -0.415 -0.159 0.181 -2.758 -11.080 7.140 4 V_G9:C53_V V 9 ? V 53 ? 19 1 1 A U 5 1_555 A A 46 1_555 0.357 0.013 0.341 -1.504 -10.835 7.647 5 V_U10:A52_V V 10 ? V 52 ? 20 1 1 A G 6 1_555 A G 45 1_555 -2.082 -3.693 -0.235 17.719 -4.202 82.980 6 V_G11:G51_V V 11 ? V 51 ? 6 3 1 A G 7 1_555 A A 44 1_555 -0.126 1.409 -0.395 9.304 -5.741 -5.541 7 V_G12:A50_V V 12 ? V 50 ? 8 1 1 A U 8 1_555 A G 43 1_555 2.636 -0.550 0.265 2.360 -10.767 3.870 8 V_U13:G49_V V 13 ? V 49 ? 28 1 1 A C 9 1_555 A G 42 1_555 0.331 -0.166 -0.126 8.883 -11.543 -1.013 9 V_C14:G48_V V 14 ? V 48 ? 19 1 1 A C 10 1_555 A G 41 1_555 0.240 -0.224 0.093 3.345 -7.217 4.909 10 V_C15:G47_V V 15 ? V 47 ? 19 1 1 A G 11 1_555 A C 40 1_555 0.163 -0.061 -0.009 -8.338 -15.757 -2.336 11 V_G16:C46_V V 16 ? V 46 ? 19 1 1 A U 12 1_555 A A 39 1_555 0.315 0.164 -0.102 7.025 -1.638 1.300 12 V_U17:A45_V V 17 ? V 45 ? 20 1 1 A G 20 1_555 A C 37 1_555 -0.979 -0.214 0.462 -0.510 -12.444 2.081 13 V_G25:C43_V V 25 ? V 43 ? 19 1 1 A U 21 1_555 A A 36 1_555 0.115 -0.339 0.280 -2.319 -13.889 -0.224 14 V_U26:A42_V V 26 ? V 42 ? 20 1 1 A U 22 1_555 A A 35 1_555 -0.141 -0.411 0.004 1.583 -6.290 0.304 15 V_U27:A41_V V 27 ? V 41 ? 20 1 1 A C 23 1_555 A G 34 1_555 0.758 -0.492 0.125 7.566 -7.740 -4.410 16 V_C28:G40_V V 28 ? V 40 ? 19 1 1 A C 24 1_555 A G 33 1_555 0.565 0.022 -0.001 5.013 -5.936 7.096 17 V_C29:G39_V V 29 ? V 39 ? 19 1 1 A U 25 1_555 A A 32 1_555 -0.392 -0.184 0.006 6.158 -5.206 1.022 18 V_U30:A38_V V 30 ? V 38 ? 20 1 1 A C 26 1_555 A G 31 1_555 0.615 -0.061 0.009 4.349 5.073 3.847 19 V_C31:G37_V V 31 ? V 37 ? 19 1 1 A G 27 1_555 A A 30 1_555 6.943 -5.060 1.363 16.517 3.527 -10.735 20 V_G32:A35_V V 32 ? V 35 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A GTP 1 1_555 A C 50 1_555 A G 2 1_555 A C 49 1_555 0.061 -2.016 3.240 -1.980 0.989 30.956 -3.955 -0.487 3.166 1.851 3.704 31.033 1 VV_GTP6G7:C55C56_VV V 6 ? V 56 ? V 7 ? V 55 ? 1 A G 2 1_555 A C 49 1_555 A C 3 1_555 A G 48 1_555 -0.380 -1.698 3.074 -0.117 1.844 35.251 -3.054 0.610 2.985 3.043 0.193 35.298 2 VV_G7C8:G54C55_VV V 7 ? V 55 ? V 8 ? V 54 ? 1 A C 3 1_555 A G 48 1_555 A G 4 1_555 A C 47 1_555 0.119 -1.638 3.240 -0.679 8.937 29.645 -4.660 -0.344 2.643 16.983 1.291 30.941 3 VV_C8G9:C53G54_VV V 8 ? V 54 ? V 9 ? V 53 ? 1 A G 4 1_555 A C 47 1_555 A U 5 1_555 A A 46 1_555 0.296 -1.285 3.172 0.158 8.116 35.249 -3.134 -0.456 2.817 13.187 -0.257 36.143 4 VV_G9U10:A52C53_VV V 9 ? V 53 ? V 10 ? V 52 ? 1 A U 5 1_555 A A 46 1_555 A G 6 1_555 A G 45 1_555 0.084 -2.958 -0.967 -166.395 28.879 166.754 -1.469 0.015 -1.028 14.446 83.234 178.720 5 VV_U10G11:G51A52_VV V 10 ? V 52 ? V 11 ? V 51 ? 1 A G 6 1_555 A G 45 1_555 A G 7 1_555 A A 44 1_555 -0.243 -3.480 -2.422 135.849 -98.932 115.573 -2.039 -0.285 -1.069 -50.004 -68.663 173.641 6 VV_G11G12:A50G51_VV V 11 ? V 51 ? V 12 ? V 50 ? 1 A G 7 1_555 A A 44 1_555 A U 8 1_555 A G 43 1_555 0.123 -1.556 3.443 -4.597 7.808 42.918 -2.836 -0.607 3.099 10.531 6.200 43.819 7 VV_G12U13:G49A50_VV V 12 ? V 50 ? V 13 ? V 49 ? 1 A U 8 1_555 A G 43 1_555 A C 9 1_555 A G 42 1_555 -0.140 -1.821 2.762 3.909 7.331 26.910 -5.068 0.993 2.159 15.296 -8.157 28.140 8 VV_U13C14:G48G49_VV V 13 ? V 49 ? V 14 ? V 48 ? 1 A C 9 1_555 A G 42 1_555 A C 10 1_555 A G 41 1_555 -0.529 -2.416 3.301 -4.529 7.242 25.946 -6.791 0.076 2.597 15.599 9.755 27.292 9 VV_C14C15:G47G48_VV V 14 ? V 48 ? V 15 ? V 47 ? 1 A C 10 1_555 A G 41 1_555 A G 11 1_555 A C 40 1_555 -0.122 -2.245 3.474 1.519 12.373 33.256 -5.401 0.410 2.498 20.735 -2.545 35.453 10 VV_C15G16:C46G47_VV V 15 ? V 47 ? V 16 ? V 46 ? 1 A G 11 1_555 A C 40 1_555 A U 12 1_555 A A 39 1_555 0.101 -1.391 3.102 2.426 1.695 27.538 -3.291 0.339 3.011 3.547 -5.079 27.694 11 VV_G16U17:A45C46_VV V 16 ? V 46 ? V 17 ? V 45 ? 1 A G 20 1_555 A C 37 1_555 A U 21 1_555 A A 36 1_555 -0.359 -1.320 3.267 1.594 3.322 38.546 -2.391 0.732 3.130 5.018 -2.407 38.715 12 VV_G25U26:A42C43_VV V 25 ? V 43 ? V 26 ? V 42 ? 1 A U 21 1_555 A A 36 1_555 A U 22 1_555 A A 35 1_555 0.041 -1.516 3.076 1.478 6.507 30.194 -3.972 0.179 2.697 12.303 -2.795 30.906 13 VV_U26U27:A41A42_VV V 26 ? V 42 ? V 27 ? V 41 ? 1 A U 22 1_555 A A 35 1_555 A C 23 1_555 A G 34 1_555 0.138 -1.753 3.163 -2.320 2.595 36.380 -3.135 -0.523 3.021 4.144 3.706 36.541 14 VV_U27C28:G40A41_VV V 27 ? V 41 ? V 28 ? V 40 ? 1 A C 23 1_555 A G 34 1_555 A C 24 1_555 A G 33 1_555 -0.060 -2.121 3.264 -0.585 1.141 25.574 -5.104 -0.027 3.168 2.575 1.320 25.605 15 VV_C28C29:G39G40_VV V 28 ? V 40 ? V 29 ? V 39 ? 1 A C 24 1_555 A G 33 1_555 A U 25 1_555 A A 32 1_555 -0.547 -2.001 3.196 -1.823 4.690 27.386 -5.206 0.731 2.850 9.801 3.809 27.836 16 VV_C29U30:A38G39_VV V 29 ? V 39 ? V 30 ? V 38 ? 1 A U 25 1_555 A A 32 1_555 A C 26 1_555 A G 31 1_555 0.144 -1.908 3.293 -0.459 8.462 35.611 -4.138 -0.289 2.780 13.600 0.737 36.573 17 VV_U30C31:G37A38_VV V 30 ? V 38 ? V 31 ? V 37 ? 1 A C 26 1_555 A G 31 1_555 A G 27 1_555 A A 30 1_555 -1.774 -1.076 2.762 -4.127 11.149 51.987 -1.793 1.761 2.620 12.532 4.639 53.236 18 VV_C31G32:A35G37_VV V 31 ? V 37 ? V 32 ? V 35 ? # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id NPR _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id NPR _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name '2-AMINO-7,8-DIHYDRO-6-(1,2,3-TRIHYDROXYPROPYL)-4(1H)-PTERIDINONE' _pdbx_entity_nonpoly.comp_id NPR # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 7WI9 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #