data_7WO7 # _entry.id 7WO7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7WO7 pdb_00007wo7 10.2210/pdb7wo7/pdb WWPDB D_1300027115 ? ? EMDB EMD-32641 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-07-20 2 'Structure model' 1 1 2022-08-17 3 'Structure model' 1 2 2022-09-07 4 'Structure model' 1 3 2022-09-14 5 'Structure model' 1 4 2024-11-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' citation_author 5 4 'Structure model' citation 6 4 'Structure model' citation_author 7 5 'Structure model' chem_comp_atom 8 5 'Structure model' chem_comp_bond 9 5 'Structure model' em_admin 10 5 'Structure model' pdbx_entry_details 11 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.page_first' 2 2 'Structure model' '_citation.page_last' 3 2 'Structure model' '_citation.pdbx_database_id_PubMed' 4 2 'Structure model' '_citation.title' 5 2 'Structure model' '_citation_author.identifier_ORCID' 6 3 'Structure model' '_citation.journal_volume' 7 3 'Structure model' '_citation.page_first' 8 3 'Structure model' '_citation.page_last' 9 3 'Structure model' '_citation_author.identifier_ORCID' 10 4 'Structure model' '_citation.page_first' 11 4 'Structure model' '_citation.page_last' 12 4 'Structure model' '_citation_author.identifier_ORCID' 13 5 'Structure model' '_em_admin.last_update' 14 5 'Structure model' '_pdbx_entry_details.has_protein_modification' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7WO7 _pdbx_database_status.recvd_initial_deposition_date 2022-01-20 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'S-mAb15 NRAb2 local-refined map' _pdbx_database_related.db_id EMD-32641 _pdbx_database_related.content_type 'associated EM volume' # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 3 ZhenguoChen@fudan.edu.cn ZhenGuo Chen ? 'principal investigator/group leader' 0000-0003-4748-9299 4 llsun@fudan.edu.cn Lei Sun ? 'principal investigator/group leader' 0000-0001-8741-0202 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Zhan, W.Q.' 1 ? 'Zhang, X.' 2 ? 'Chen, Z.G.' 3 ? 'Sun, L.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Virol. _citation.journal_id_ASTM JOVIAM _citation.journal_id_CSD 0825 _citation.journal_id_ISSN 1098-5514 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 96 _citation.language ? _citation.page_first e0048022 _citation.page_last e0048022 _citation.title ;Structural Study of SARS-CoV-2 Antibodies Identifies a Broad-Spectrum Antibody That Neutralizes the Omicron Variant by Disassembling the Spike Trimer. ; _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1128/jvi.00480-22 _citation.pdbx_database_id_PubMed 35924918 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhan, W.' 1 ? primary 'Tian, X.' 2 ? primary 'Zhang, X.' 3 ? primary 'Xing, S.' 4 ? primary 'Song, W.' 5 ? primary 'Liu, Q.' 6 ? primary 'Hao, A.' 7 ? primary 'Hu, Y.' 8 ? primary 'Zhang, M.' 9 ? primary 'Ying, T.' 10 0000-0002-9597-2843 primary 'Chen, Z.' 11 ? primary 'Lan, F.' 12 ? primary 'Sun, L.' 13 0000-0001-8741-0202 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'mAb15 VH' 24194.086 1 ? ? ? ? 2 polymer man 'mAb15 VL' 23315.426 1 ? ? ? ? 3 polymer man 'Spike protein S1' 21772.391 1 ? ? ? ? 4 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;EVQLVQSGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANINQDGGEKYYVDSVKGRFTISRDNAKNSLF LQMNSVRAEDTAVYFCARVWYYYGPRDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT ; ;EVQLVQSGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANINQDGGEKYYVDSVKGRFTISRDNAKNSLF LQMNSVRAEDTAVYFCARVWYYYGPRDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT ; A ? 2 'polypeptide(L)' no no ;DIVMTQPHSVSESPGKTVTISCTRSSGSIASNYVQWYQQRPGSSPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISG LKTEDEADYYCQSYDGSNHNVVFGGGTELTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSP VKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS ; ;DIVMTQPHSVSESPGKTVTISCTRSSGSIASNYVQWYQQRPGSSPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISG LKTEDEADYYCQSYDGSNHNVVFGGGTELTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSP VKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS ; B ? 3 'polypeptide(L)' no no ;NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQ SYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP ; ;NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQ SYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP ; C ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-beta-D-glucopyranose _pdbx_entity_nonpoly.comp_id NAG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 VAL n 1 3 GLN n 1 4 LEU n 1 5 VAL n 1 6 GLN n 1 7 SER n 1 8 GLY n 1 9 GLY n 1 10 GLY n 1 11 LEU n 1 12 VAL n 1 13 GLN n 1 14 PRO n 1 15 GLY n 1 16 GLY n 1 17 SER n 1 18 LEU n 1 19 ARG n 1 20 LEU n 1 21 SER n 1 22 CYS n 1 23 ALA n 1 24 ALA n 1 25 SER n 1 26 GLY n 1 27 PHE n 1 28 THR n 1 29 PHE n 1 30 SER n 1 31 SER n 1 32 TYR n 1 33 TRP n 1 34 MET n 1 35 SER n 1 36 TRP n 1 37 VAL n 1 38 ARG n 1 39 GLN n 1 40 ALA n 1 41 PRO n 1 42 GLY n 1 43 LYS n 1 44 GLY n 1 45 LEU n 1 46 GLU n 1 47 TRP n 1 48 VAL n 1 49 ALA n 1 50 ASN n 1 51 ILE n 1 52 ASN n 1 53 GLN n 1 54 ASP n 1 55 GLY n 1 56 GLY n 1 57 GLU n 1 58 LYS n 1 59 TYR n 1 60 TYR n 1 61 VAL n 1 62 ASP n 1 63 SER n 1 64 VAL n 1 65 LYS n 1 66 GLY n 1 67 ARG n 1 68 PHE n 1 69 THR n 1 70 ILE n 1 71 SER n 1 72 ARG n 1 73 ASP n 1 74 ASN n 1 75 ALA n 1 76 LYS n 1 77 ASN n 1 78 SER n 1 79 LEU n 1 80 PHE n 1 81 LEU n 1 82 GLN n 1 83 MET n 1 84 ASN n 1 85 SER n 1 86 VAL n 1 87 ARG n 1 88 ALA n 1 89 GLU n 1 90 ASP n 1 91 THR n 1 92 ALA n 1 93 VAL n 1 94 TYR n 1 95 PHE n 1 96 CYS n 1 97 ALA n 1 98 ARG n 1 99 VAL n 1 100 TRP n 1 101 TYR n 1 102 TYR n 1 103 TYR n 1 104 GLY n 1 105 PRO n 1 106 ARG n 1 107 ASP n 1 108 TYR n 1 109 TRP n 1 110 GLY n 1 111 GLN n 1 112 GLY n 1 113 THR n 1 114 LEU n 1 115 VAL n 1 116 THR n 1 117 VAL n 1 118 SER n 1 119 SER n 1 120 ALA n 1 121 SER n 1 122 THR n 1 123 LYS n 1 124 GLY n 1 125 PRO n 1 126 SER n 1 127 VAL n 1 128 PHE n 1 129 PRO n 1 130 LEU n 1 131 ALA n 1 132 PRO n 1 133 SER n 1 134 SER n 1 135 LYS n 1 136 SER n 1 137 THR n 1 138 SER n 1 139 GLY n 1 140 GLY n 1 141 THR n 1 142 ALA n 1 143 ALA n 1 144 LEU n 1 145 GLY n 1 146 CYS n 1 147 LEU n 1 148 VAL n 1 149 LYS n 1 150 ASP n 1 151 TYR n 1 152 PHE n 1 153 PRO n 1 154 GLU n 1 155 PRO n 1 156 VAL n 1 157 THR n 1 158 VAL n 1 159 SER n 1 160 TRP n 1 161 ASN n 1 162 SER n 1 163 GLY n 1 164 ALA n 1 165 LEU n 1 166 THR n 1 167 SER n 1 168 GLY n 1 169 VAL n 1 170 HIS n 1 171 THR n 1 172 PHE n 1 173 PRO n 1 174 ALA n 1 175 VAL n 1 176 LEU n 1 177 GLN n 1 178 SER n 1 179 SER n 1 180 GLY n 1 181 LEU n 1 182 TYR n 1 183 SER n 1 184 LEU n 1 185 SER n 1 186 SER n 1 187 VAL n 1 188 VAL n 1 189 THR n 1 190 VAL n 1 191 PRO n 1 192 SER n 1 193 SER n 1 194 SER n 1 195 LEU n 1 196 GLY n 1 197 THR n 1 198 GLN n 1 199 THR n 1 200 TYR n 1 201 ILE n 1 202 CYS n 1 203 ASN n 1 204 VAL n 1 205 ASN n 1 206 HIS n 1 207 LYS n 1 208 PRO n 1 209 SER n 1 210 ASN n 1 211 THR n 1 212 LYS n 1 213 VAL n 1 214 ASP n 1 215 LYS n 1 216 ARG n 1 217 VAL n 1 218 GLU n 1 219 PRO n 1 220 LYS n 1 221 SER n 1 222 CYS n 1 223 ASP n 1 224 LYS n 1 225 THR n 2 1 ASP n 2 2 ILE n 2 3 VAL n 2 4 MET n 2 5 THR n 2 6 GLN n 2 7 PRO n 2 8 HIS n 2 9 SER n 2 10 VAL n 2 11 SER n 2 12 GLU n 2 13 SER n 2 14 PRO n 2 15 GLY n 2 16 LYS n 2 17 THR n 2 18 VAL n 2 19 THR n 2 20 ILE n 2 21 SER n 2 22 CYS n 2 23 THR n 2 24 ARG n 2 25 SER n 2 26 SER n 2 27 GLY n 2 28 SER n 2 29 ILE n 2 30 ALA n 2 31 SER n 2 32 ASN n 2 33 TYR n 2 34 VAL n 2 35 GLN n 2 36 TRP n 2 37 TYR n 2 38 GLN n 2 39 GLN n 2 40 ARG n 2 41 PRO n 2 42 GLY n 2 43 SER n 2 44 SER n 2 45 PRO n 2 46 THR n 2 47 THR n 2 48 VAL n 2 49 ILE n 2 50 TYR n 2 51 GLU n 2 52 ASP n 2 53 ASN n 2 54 GLN n 2 55 ARG n 2 56 PRO n 2 57 SER n 2 58 GLY n 2 59 VAL n 2 60 PRO n 2 61 ASP n 2 62 ARG n 2 63 PHE n 2 64 SER n 2 65 GLY n 2 66 SER n 2 67 ILE n 2 68 ASP n 2 69 SER n 2 70 SER n 2 71 SER n 2 72 ASN n 2 73 SER n 2 74 ALA n 2 75 SER n 2 76 LEU n 2 77 THR n 2 78 ILE n 2 79 SER n 2 80 GLY n 2 81 LEU n 2 82 LYS n 2 83 THR n 2 84 GLU n 2 85 ASP n 2 86 GLU n 2 87 ALA n 2 88 ASP n 2 89 TYR n 2 90 TYR n 2 91 CYS n 2 92 GLN n 2 93 SER n 2 94 TYR n 2 95 ASP n 2 96 GLY n 2 97 SER n 2 98 ASN n 2 99 HIS n 2 100 ASN n 2 101 VAL n 2 102 VAL n 2 103 PHE n 2 104 GLY n 2 105 GLY n 2 106 GLY n 2 107 THR n 2 108 GLU n 2 109 LEU n 2 110 THR n 2 111 VAL n 2 112 LEU n 2 113 SER n 2 114 GLN n 2 115 PRO n 2 116 LYS n 2 117 ALA n 2 118 ALA n 2 119 PRO n 2 120 SER n 2 121 VAL n 2 122 THR n 2 123 LEU n 2 124 PHE n 2 125 PRO n 2 126 PRO n 2 127 SER n 2 128 SER n 2 129 GLU n 2 130 GLU n 2 131 LEU n 2 132 GLN n 2 133 ALA n 2 134 ASN n 2 135 LYS n 2 136 ALA n 2 137 THR n 2 138 LEU n 2 139 VAL n 2 140 CYS n 2 141 LEU n 2 142 ILE n 2 143 SER n 2 144 ASP n 2 145 PHE n 2 146 TYR n 2 147 PRO n 2 148 GLY n 2 149 ALA n 2 150 VAL n 2 151 THR n 2 152 VAL n 2 153 ALA n 2 154 TRP n 2 155 LYS n 2 156 ALA n 2 157 ASP n 2 158 SER n 2 159 SER n 2 160 PRO n 2 161 VAL n 2 162 LYS n 2 163 ALA n 2 164 GLY n 2 165 VAL n 2 166 GLU n 2 167 THR n 2 168 THR n 2 169 THR n 2 170 PRO n 2 171 SER n 2 172 LYS n 2 173 GLN n 2 174 SER n 2 175 ASN n 2 176 ASN n 2 177 LYS n 2 178 TYR n 2 179 ALA n 2 180 ALA n 2 181 SER n 2 182 SER n 2 183 TYR n 2 184 LEU n 2 185 SER n 2 186 LEU n 2 187 THR n 2 188 PRO n 2 189 GLU n 2 190 GLN n 2 191 TRP n 2 192 LYS n 2 193 SER n 2 194 HIS n 2 195 ARG n 2 196 SER n 2 197 TYR n 2 198 SER n 2 199 CYS n 2 200 GLN n 2 201 VAL n 2 202 THR n 2 203 HIS n 2 204 GLU n 2 205 GLY n 2 206 SER n 2 207 THR n 2 208 VAL n 2 209 GLU n 2 210 LYS n 2 211 THR n 2 212 VAL n 2 213 ALA n 2 214 PRO n 2 215 THR n 2 216 GLU n 2 217 CYS n 2 218 SER n 3 1 ASN n 3 2 LEU n 3 3 CYS n 3 4 PRO n 3 5 PHE n 3 6 GLY n 3 7 GLU n 3 8 VAL n 3 9 PHE n 3 10 ASN n 3 11 ALA n 3 12 THR n 3 13 ARG n 3 14 PHE n 3 15 ALA n 3 16 SER n 3 17 VAL n 3 18 TYR n 3 19 ALA n 3 20 TRP n 3 21 ASN n 3 22 ARG n 3 23 LYS n 3 24 ARG n 3 25 ILE n 3 26 SER n 3 27 ASN n 3 28 CYS n 3 29 VAL n 3 30 ALA n 3 31 ASP n 3 32 TYR n 3 33 SER n 3 34 VAL n 3 35 LEU n 3 36 TYR n 3 37 ASN n 3 38 SER n 3 39 ALA n 3 40 SER n 3 41 PHE n 3 42 SER n 3 43 THR n 3 44 PHE n 3 45 LYS n 3 46 CYS n 3 47 TYR n 3 48 GLY n 3 49 VAL n 3 50 SER n 3 51 PRO n 3 52 THR n 3 53 LYS n 3 54 LEU n 3 55 ASN n 3 56 ASP n 3 57 LEU n 3 58 CYS n 3 59 PHE n 3 60 THR n 3 61 ASN n 3 62 VAL n 3 63 TYR n 3 64 ALA n 3 65 ASP n 3 66 SER n 3 67 PHE n 3 68 VAL n 3 69 ILE n 3 70 ARG n 3 71 GLY n 3 72 ASP n 3 73 GLU n 3 74 VAL n 3 75 ARG n 3 76 GLN n 3 77 ILE n 3 78 ALA n 3 79 PRO n 3 80 GLY n 3 81 GLN n 3 82 THR n 3 83 GLY n 3 84 LYS n 3 85 ILE n 3 86 ALA n 3 87 ASP n 3 88 TYR n 3 89 ASN n 3 90 TYR n 3 91 LYS n 3 92 LEU n 3 93 PRO n 3 94 ASP n 3 95 ASP n 3 96 PHE n 3 97 THR n 3 98 GLY n 3 99 CYS n 3 100 VAL n 3 101 ILE n 3 102 ALA n 3 103 TRP n 3 104 ASN n 3 105 SER n 3 106 ASN n 3 107 ASN n 3 108 LEU n 3 109 ASP n 3 110 SER n 3 111 LYS n 3 112 VAL n 3 113 GLY n 3 114 GLY n 3 115 ASN n 3 116 TYR n 3 117 ASN n 3 118 TYR n 3 119 LEU n 3 120 TYR n 3 121 ARG n 3 122 LEU n 3 123 PHE n 3 124 ARG n 3 125 LYS n 3 126 SER n 3 127 ASN n 3 128 LEU n 3 129 LYS n 3 130 PRO n 3 131 PHE n 3 132 GLU n 3 133 ARG n 3 134 ASP n 3 135 ILE n 3 136 SER n 3 137 THR n 3 138 GLU n 3 139 ILE n 3 140 TYR n 3 141 GLN n 3 142 ALA n 3 143 GLY n 3 144 SER n 3 145 THR n 3 146 PRO n 3 147 CYS n 3 148 ASN n 3 149 GLY n 3 150 VAL n 3 151 GLU n 3 152 GLY n 3 153 PHE n 3 154 ASN n 3 155 CYS n 3 156 TYR n 3 157 PHE n 3 158 PRO n 3 159 LEU n 3 160 GLN n 3 161 SER n 3 162 TYR n 3 163 GLY n 3 164 PHE n 3 165 GLN n 3 166 PRO n 3 167 THR n 3 168 ASN n 3 169 GLY n 3 170 VAL n 3 171 GLY n 3 172 TYR n 3 173 GLN n 3 174 PRO n 3 175 TYR n 3 176 ARG n 3 177 VAL n 3 178 VAL n 3 179 VAL n 3 180 LEU n 3 181 SER n 3 182 PHE n 3 183 GLU n 3 184 LEU n 3 185 LEU n 3 186 HIS n 3 187 ALA n 3 188 PRO n 3 189 ALA n 3 190 THR n 3 191 VAL n 3 192 CYS n 3 193 GLY n 3 194 PRO n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 225 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 218 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 194 ? ? 'S, 2' ? ? ? ? ? ? 'Severe acute respiratory syndrome coronavirus 2' 2697049 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 1 1 GLU GLU A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 GLN 6 6 6 GLN GLN A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 GLN 13 13 13 GLN GLN A . n A 1 14 PRO 14 14 14 PRO PRO A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 ARG 19 19 19 ARG ARG A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 CYS 22 22 22 CYS CYS A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 TRP 33 33 33 TRP TRP A . n A 1 34 MET 34 34 34 MET MET A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 TRP 36 36 36 TRP TRP A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 ARG 38 38 38 ARG ARG A . n A 1 39 GLN 39 39 39 GLN GLN A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 TRP 47 47 47 TRP TRP A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 ASN 50 50 50 ASN ASN A . n A 1 51 ILE 51 51 51 ILE ILE A . n A 1 52 ASN 52 52 52 ASN ASN A . n A 1 53 GLN 53 53 53 GLN GLN A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 TYR 60 60 60 TYR TYR A . n A 1 61 VAL 61 61 61 VAL VAL A . n A 1 62 ASP 62 62 62 ASP ASP A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 ARG 67 67 67 ARG ARG A . n A 1 68 PHE 68 68 68 PHE PHE A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 ILE 70 70 70 ILE ILE A . n A 1 71 SER 71 71 71 SER SER A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 ASP 73 73 73 ASP ASP A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 ASN 77 77 77 ASN ASN A . n A 1 78 SER 78 78 78 SER SER A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 PHE 80 80 80 PHE PHE A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 GLN 82 82 82 GLN GLN A . n A 1 83 MET 83 83 83 MET MET A . n A 1 84 ASN 84 84 84 ASN ASN A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 TYR 94 94 94 TYR TYR A . n A 1 95 PHE 95 95 95 PHE PHE A . n A 1 96 CYS 96 96 96 CYS CYS A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 VAL 99 99 99 VAL VAL A . n A 1 100 TRP 100 100 100 TRP TRP A . n A 1 101 TYR 101 101 101 TYR TYR A . n A 1 102 TYR 102 102 102 TYR TYR A . n A 1 103 TYR 103 103 103 TYR TYR A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 PRO 105 105 105 PRO PRO A . n A 1 106 ARG 106 106 106 ARG ARG A . n A 1 107 ASP 107 107 107 ASP ASP A . n A 1 108 TYR 108 108 108 TYR TYR A . n A 1 109 TRP 109 109 109 TRP TRP A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 GLN 111 111 111 GLN GLN A . n A 1 112 GLY 112 112 112 GLY GLY A . n A 1 113 THR 113 113 113 THR THR A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 THR 116 116 116 THR THR A . n A 1 117 VAL 117 117 117 VAL VAL A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 SER 119 119 119 SER SER A . n A 1 120 ALA 120 120 120 ALA ALA A . n A 1 121 SER 121 121 121 SER SER A . n A 1 122 THR 122 122 122 THR THR A . n A 1 123 LYS 123 123 123 LYS LYS A . n A 1 124 GLY 124 124 124 GLY GLY A . n A 1 125 PRO 125 125 125 PRO PRO A . n A 1 126 SER 126 126 126 SER SER A . n A 1 127 VAL 127 127 127 VAL VAL A . n A 1 128 PHE 128 128 128 PHE PHE A . n A 1 129 PRO 129 129 129 PRO PRO A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 PRO 132 132 132 PRO PRO A . n A 1 133 SER 133 133 133 SER SER A . n A 1 134 SER 134 134 134 SER SER A . n A 1 135 LYS 135 135 135 LYS LYS A . n A 1 136 SER 136 136 136 SER SER A . n A 1 137 THR 137 137 137 THR THR A . n A 1 138 SER 138 138 138 SER SER A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 GLY 140 140 140 GLY GLY A . n A 1 141 THR 141 141 141 THR THR A . n A 1 142 ALA 142 142 142 ALA ALA A . n A 1 143 ALA 143 143 143 ALA ALA A . n A 1 144 LEU 144 144 144 LEU LEU A . n A 1 145 GLY 145 145 145 GLY GLY A . n A 1 146 CYS 146 146 146 CYS CYS A . n A 1 147 LEU 147 147 147 LEU LEU A . n A 1 148 VAL 148 148 148 VAL VAL A . n A 1 149 LYS 149 149 149 LYS LYS A . n A 1 150 ASP 150 150 150 ASP ASP A . n A 1 151 TYR 151 151 151 TYR TYR A . n A 1 152 PHE 152 152 152 PHE PHE A . n A 1 153 PRO 153 153 153 PRO PRO A . n A 1 154 GLU 154 154 154 GLU GLU A . n A 1 155 PRO 155 155 155 PRO PRO A . n A 1 156 VAL 156 156 156 VAL VAL A . n A 1 157 THR 157 157 157 THR THR A . n A 1 158 VAL 158 158 158 VAL VAL A . n A 1 159 SER 159 159 159 SER SER A . n A 1 160 TRP 160 160 160 TRP TRP A . n A 1 161 ASN 161 161 161 ASN ASN A . n A 1 162 SER 162 162 162 SER SER A . n A 1 163 GLY 163 163 163 GLY GLY A . n A 1 164 ALA 164 164 164 ALA ALA A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 THR 166 166 166 THR THR A . n A 1 167 SER 167 167 167 SER SER A . n A 1 168 GLY 168 168 168 GLY GLY A . n A 1 169 VAL 169 169 169 VAL VAL A . n A 1 170 HIS 170 170 170 HIS HIS A . n A 1 171 THR 171 171 171 THR THR A . n A 1 172 PHE 172 172 172 PHE PHE A . n A 1 173 PRO 173 173 173 PRO PRO A . n A 1 174 ALA 174 174 174 ALA ALA A . n A 1 175 VAL 175 175 175 VAL VAL A . n A 1 176 LEU 176 176 176 LEU LEU A . n A 1 177 GLN 177 177 177 GLN GLN A . n A 1 178 SER 178 178 178 SER SER A . n A 1 179 SER 179 179 179 SER SER A . n A 1 180 GLY 180 180 180 GLY GLY A . n A 1 181 LEU 181 181 181 LEU LEU A . n A 1 182 TYR 182 182 182 TYR TYR A . n A 1 183 SER 183 183 183 SER SER A . n A 1 184 LEU 184 184 184 LEU LEU A . n A 1 185 SER 185 185 185 SER SER A . n A 1 186 SER 186 186 186 SER SER A . n A 1 187 VAL 187 187 187 VAL VAL A . n A 1 188 VAL 188 188 188 VAL VAL A . n A 1 189 THR 189 189 189 THR THR A . n A 1 190 VAL 190 190 190 VAL VAL A . n A 1 191 PRO 191 191 191 PRO PRO A . n A 1 192 SER 192 192 192 SER SER A . n A 1 193 SER 193 193 193 SER SER A . n A 1 194 SER 194 194 194 SER SER A . n A 1 195 LEU 195 195 195 LEU LEU A . n A 1 196 GLY 196 196 196 GLY GLY A . n A 1 197 THR 197 197 197 THR THR A . n A 1 198 GLN 198 198 198 GLN GLN A . n A 1 199 THR 199 199 199 THR THR A . n A 1 200 TYR 200 200 200 TYR TYR A . n A 1 201 ILE 201 201 201 ILE ILE A . n A 1 202 CYS 202 202 202 CYS CYS A . n A 1 203 ASN 203 203 203 ASN ASN A . n A 1 204 VAL 204 204 204 VAL VAL A . n A 1 205 ASN 205 205 205 ASN ASN A . n A 1 206 HIS 206 206 206 HIS HIS A . n A 1 207 LYS 207 207 207 LYS LYS A . n A 1 208 PRO 208 208 208 PRO PRO A . n A 1 209 SER 209 209 209 SER SER A . n A 1 210 ASN 210 210 210 ASN ASN A . n A 1 211 THR 211 211 211 THR THR A . n A 1 212 LYS 212 212 212 LYS LYS A . n A 1 213 VAL 213 213 213 VAL VAL A . n A 1 214 ASP 214 214 214 ASP ASP A . n A 1 215 LYS 215 215 215 LYS LYS A . n A 1 216 ARG 216 216 216 ARG ARG A . n A 1 217 VAL 217 217 217 VAL VAL A . n A 1 218 GLU 218 218 218 GLU GLU A . n A 1 219 PRO 219 219 219 PRO PRO A . n A 1 220 LYS 220 220 220 LYS LYS A . n A 1 221 SER 221 221 221 SER SER A . n A 1 222 CYS 222 222 222 CYS CYS A . n A 1 223 ASP 223 223 223 ASP ASP A . n A 1 224 LYS 224 224 224 LYS LYS A . n A 1 225 THR 225 225 225 THR THR A . n B 2 1 ASP 1 1 ? ? ? B . n B 2 2 ILE 2 2 2 ILE ILE B . n B 2 3 VAL 3 3 3 VAL VAL B . n B 2 4 MET 4 4 4 MET MET B . n B 2 5 THR 5 5 5 THR THR B . n B 2 6 GLN 6 6 6 GLN GLN B . n B 2 7 PRO 7 7 7 PRO PRO B . n B 2 8 HIS 8 8 8 HIS HIS B . n B 2 9 SER 9 9 9 SER SER B . n B 2 10 VAL 10 10 10 VAL VAL B . n B 2 11 SER 11 11 11 SER SER B . n B 2 12 GLU 12 12 12 GLU GLU B . n B 2 13 SER 13 13 13 SER SER B . n B 2 14 PRO 14 14 14 PRO PRO B . n B 2 15 GLY 15 15 15 GLY GLY B . n B 2 16 LYS 16 16 16 LYS LYS B . n B 2 17 THR 17 17 17 THR THR B . n B 2 18 VAL 18 18 18 VAL VAL B . n B 2 19 THR 19 19 19 THR THR B . n B 2 20 ILE 20 20 20 ILE ILE B . n B 2 21 SER 21 21 21 SER SER B . n B 2 22 CYS 22 22 22 CYS CYS B . n B 2 23 THR 23 23 23 THR THR B . n B 2 24 ARG 24 24 24 ARG ARG B . n B 2 25 SER 25 25 25 SER SER B . n B 2 26 SER 26 26 26 SER SER B . n B 2 27 GLY 27 27 27 GLY GLY B . n B 2 28 SER 28 28 28 SER SER B . n B 2 29 ILE 29 29 29 ILE ILE B . n B 2 30 ALA 30 30 30 ALA ALA B . n B 2 31 SER 31 31 31 SER SER B . n B 2 32 ASN 32 32 32 ASN ASN B . n B 2 33 TYR 33 33 33 TYR TYR B . n B 2 34 VAL 34 34 34 VAL VAL B . n B 2 35 GLN 35 35 35 GLN GLN B . n B 2 36 TRP 36 36 36 TRP TRP B . n B 2 37 TYR 37 37 37 TYR TYR B . n B 2 38 GLN 38 38 38 GLN GLN B . n B 2 39 GLN 39 39 39 GLN GLN B . n B 2 40 ARG 40 40 40 ARG ARG B . n B 2 41 PRO 41 41 41 PRO PRO B . n B 2 42 GLY 42 42 42 GLY GLY B . n B 2 43 SER 43 43 43 SER SER B . n B 2 44 SER 44 44 44 SER SER B . n B 2 45 PRO 45 45 45 PRO PRO B . n B 2 46 THR 46 46 46 THR THR B . n B 2 47 THR 47 47 47 THR THR B . n B 2 48 VAL 48 48 48 VAL VAL B . n B 2 49 ILE 49 49 49 ILE ILE B . n B 2 50 TYR 50 50 50 TYR TYR B . n B 2 51 GLU 51 51 51 GLU GLU B . n B 2 52 ASP 52 52 52 ASP ASP B . n B 2 53 ASN 53 53 53 ASN ASN B . n B 2 54 GLN 54 54 54 GLN GLN B . n B 2 55 ARG 55 55 55 ARG ARG B . n B 2 56 PRO 56 56 56 PRO PRO B . n B 2 57 SER 57 57 57 SER SER B . n B 2 58 GLY 58 58 58 GLY GLY B . n B 2 59 VAL 59 59 59 VAL VAL B . n B 2 60 PRO 60 60 60 PRO PRO B . n B 2 61 ASP 61 61 61 ASP ASP B . n B 2 62 ARG 62 62 62 ARG ARG B . n B 2 63 PHE 63 63 63 PHE PHE B . n B 2 64 SER 64 64 64 SER SER B . n B 2 65 GLY 65 65 65 GLY GLY B . n B 2 66 SER 66 66 66 SER SER B . n B 2 67 ILE 67 67 67 ILE ILE B . n B 2 68 ASP 68 68 68 ASP ASP B . n B 2 69 SER 69 69 69 SER SER B . n B 2 70 SER 70 70 70 SER SER B . n B 2 71 SER 71 71 71 SER SER B . n B 2 72 ASN 72 72 72 ASN ASN B . n B 2 73 SER 73 73 73 SER SER B . n B 2 74 ALA 74 74 74 ALA ALA B . n B 2 75 SER 75 75 75 SER SER B . n B 2 76 LEU 76 76 76 LEU LEU B . n B 2 77 THR 77 77 77 THR THR B . n B 2 78 ILE 78 78 78 ILE ILE B . n B 2 79 SER 79 79 79 SER SER B . n B 2 80 GLY 80 80 80 GLY GLY B . n B 2 81 LEU 81 81 81 LEU LEU B . n B 2 82 LYS 82 82 82 LYS LYS B . n B 2 83 THR 83 83 83 THR THR B . n B 2 84 GLU 84 84 84 GLU GLU B . n B 2 85 ASP 85 85 85 ASP ASP B . n B 2 86 GLU 86 86 86 GLU GLU B . n B 2 87 ALA 87 87 87 ALA ALA B . n B 2 88 ASP 88 88 88 ASP ASP B . n B 2 89 TYR 89 89 89 TYR TYR B . n B 2 90 TYR 90 90 90 TYR TYR B . n B 2 91 CYS 91 91 91 CYS CYS B . n B 2 92 GLN 92 92 92 GLN GLN B . n B 2 93 SER 93 93 93 SER SER B . n B 2 94 TYR 94 94 94 TYR TYR B . n B 2 95 ASP 95 95 95 ASP ASP B . n B 2 96 GLY 96 96 96 GLY GLY B . n B 2 97 SER 97 97 97 SER SER B . n B 2 98 ASN 98 98 98 ASN ASN B . n B 2 99 HIS 99 99 99 HIS HIS B . n B 2 100 ASN 100 100 100 ASN ASN B . n B 2 101 VAL 101 101 101 VAL VAL B . n B 2 102 VAL 102 102 102 VAL VAL B . n B 2 103 PHE 103 103 103 PHE PHE B . n B 2 104 GLY 104 104 104 GLY GLY B . n B 2 105 GLY 105 105 105 GLY GLY B . n B 2 106 GLY 106 106 106 GLY GLY B . n B 2 107 THR 107 107 107 THR THR B . n B 2 108 GLU 108 108 108 GLU GLU B . n B 2 109 LEU 109 109 109 LEU LEU B . n B 2 110 THR 110 110 110 THR THR B . n B 2 111 VAL 111 111 111 VAL VAL B . n B 2 112 LEU 112 112 112 LEU LEU B . n B 2 113 SER 113 113 113 SER SER B . n B 2 114 GLN 114 114 114 GLN GLN B . n B 2 115 PRO 115 115 115 PRO PRO B . n B 2 116 LYS 116 116 116 LYS LYS B . n B 2 117 ALA 117 117 117 ALA ALA B . n B 2 118 ALA 118 118 118 ALA ALA B . n B 2 119 PRO 119 119 119 PRO PRO B . n B 2 120 SER 120 120 120 SER SER B . n B 2 121 VAL 121 121 121 VAL VAL B . n B 2 122 THR 122 122 122 THR THR B . n B 2 123 LEU 123 123 123 LEU LEU B . n B 2 124 PHE 124 124 124 PHE PHE B . n B 2 125 PRO 125 125 125 PRO PRO B . n B 2 126 PRO 126 126 126 PRO PRO B . n B 2 127 SER 127 127 127 SER SER B . n B 2 128 SER 128 128 128 SER SER B . n B 2 129 GLU 129 129 129 GLU GLU B . n B 2 130 GLU 130 130 130 GLU GLU B . n B 2 131 LEU 131 131 131 LEU LEU B . n B 2 132 GLN 132 132 132 GLN GLN B . n B 2 133 ALA 133 133 133 ALA ALA B . n B 2 134 ASN 134 134 134 ASN ASN B . n B 2 135 LYS 135 135 135 LYS LYS B . n B 2 136 ALA 136 136 136 ALA ALA B . n B 2 137 THR 137 137 137 THR THR B . n B 2 138 LEU 138 138 138 LEU LEU B . n B 2 139 VAL 139 139 139 VAL VAL B . n B 2 140 CYS 140 140 140 CYS CYS B . n B 2 141 LEU 141 141 141 LEU LEU B . n B 2 142 ILE 142 142 142 ILE ILE B . n B 2 143 SER 143 143 143 SER SER B . n B 2 144 ASP 144 144 144 ASP ASP B . n B 2 145 PHE 145 145 145 PHE PHE B . n B 2 146 TYR 146 146 146 TYR TYR B . n B 2 147 PRO 147 147 147 PRO PRO B . n B 2 148 GLY 148 148 148 GLY GLY B . n B 2 149 ALA 149 149 149 ALA ALA B . n B 2 150 VAL 150 150 150 VAL VAL B . n B 2 151 THR 151 151 151 THR THR B . n B 2 152 VAL 152 152 152 VAL VAL B . n B 2 153 ALA 153 153 153 ALA ALA B . n B 2 154 TRP 154 154 154 TRP TRP B . n B 2 155 LYS 155 155 155 LYS LYS B . n B 2 156 ALA 156 156 156 ALA ALA B . n B 2 157 ASP 157 157 157 ASP ASP B . n B 2 158 SER 158 158 158 SER SER B . n B 2 159 SER 159 159 159 SER SER B . n B 2 160 PRO 160 160 160 PRO PRO B . n B 2 161 VAL 161 161 161 VAL VAL B . n B 2 162 LYS 162 162 162 LYS LYS B . n B 2 163 ALA 163 163 163 ALA ALA B . n B 2 164 GLY 164 164 164 GLY GLY B . n B 2 165 VAL 165 165 165 VAL VAL B . n B 2 166 GLU 166 166 166 GLU GLU B . n B 2 167 THR 167 167 167 THR THR B . n B 2 168 THR 168 168 168 THR THR B . n B 2 169 THR 169 169 169 THR THR B . n B 2 170 PRO 170 170 170 PRO PRO B . n B 2 171 SER 171 171 171 SER SER B . n B 2 172 LYS 172 172 172 LYS LYS B . n B 2 173 GLN 173 173 173 GLN GLN B . n B 2 174 SER 174 174 174 SER SER B . n B 2 175 ASN 175 175 175 ASN ASN B . n B 2 176 ASN 176 176 176 ASN ASN B . n B 2 177 LYS 177 177 177 LYS LYS B . n B 2 178 TYR 178 178 178 TYR TYR B . n B 2 179 ALA 179 179 179 ALA ALA B . n B 2 180 ALA 180 180 180 ALA ALA B . n B 2 181 SER 181 181 181 SER SER B . n B 2 182 SER 182 182 182 SER SER B . n B 2 183 TYR 183 183 183 TYR TYR B . n B 2 184 LEU 184 184 184 LEU LEU B . n B 2 185 SER 185 185 185 SER SER B . n B 2 186 LEU 186 186 186 LEU LEU B . n B 2 187 THR 187 187 187 THR THR B . n B 2 188 PRO 188 188 188 PRO PRO B . n B 2 189 GLU 189 189 189 GLU GLU B . n B 2 190 GLN 190 190 190 GLN GLN B . n B 2 191 TRP 191 191 191 TRP TRP B . n B 2 192 LYS 192 192 192 LYS LYS B . n B 2 193 SER 193 193 193 SER SER B . n B 2 194 HIS 194 194 194 HIS HIS B . n B 2 195 ARG 195 195 195 ARG ARG B . n B 2 196 SER 196 196 196 SER SER B . n B 2 197 TYR 197 197 197 TYR TYR B . n B 2 198 SER 198 198 198 SER SER B . n B 2 199 CYS 199 199 199 CYS CYS B . n B 2 200 GLN 200 200 200 GLN GLN B . n B 2 201 VAL 201 201 201 VAL VAL B . n B 2 202 THR 202 202 202 THR THR B . n B 2 203 HIS 203 203 203 HIS HIS B . n B 2 204 GLU 204 204 204 GLU GLU B . n B 2 205 GLY 205 205 205 GLY GLY B . n B 2 206 SER 206 206 206 SER SER B . n B 2 207 THR 207 207 207 THR THR B . n B 2 208 VAL 208 208 208 VAL VAL B . n B 2 209 GLU 209 209 209 GLU GLU B . n B 2 210 LYS 210 210 210 LYS LYS B . n B 2 211 THR 211 211 211 THR THR B . n B 2 212 VAL 212 212 212 VAL VAL B . n B 2 213 ALA 213 213 213 ALA ALA B . n B 2 214 PRO 214 214 214 PRO PRO B . n B 2 215 THR 215 215 215 THR THR B . n B 2 216 GLU 216 216 216 GLU GLU B . n B 2 217 CYS 217 217 ? ? ? B . n B 2 218 SER 218 218 ? ? ? B . n C 3 1 ASN 1 334 334 ASN ASN C . n C 3 2 LEU 2 335 335 LEU LEU C . n C 3 3 CYS 3 336 336 CYS CYS C . n C 3 4 PRO 4 337 337 PRO PRO C . n C 3 5 PHE 5 338 338 PHE PHE C . n C 3 6 GLY 6 339 339 GLY GLY C . n C 3 7 GLU 7 340 340 GLU GLU C . n C 3 8 VAL 8 341 341 VAL VAL C . n C 3 9 PHE 9 342 342 PHE PHE C . n C 3 10 ASN 10 343 343 ASN ASN C . n C 3 11 ALA 11 344 344 ALA ALA C . n C 3 12 THR 12 345 345 THR THR C . n C 3 13 ARG 13 346 346 ARG ARG C . n C 3 14 PHE 14 347 347 PHE PHE C . n C 3 15 ALA 15 348 348 ALA ALA C . n C 3 16 SER 16 349 349 SER SER C . n C 3 17 VAL 17 350 350 VAL VAL C . n C 3 18 TYR 18 351 351 TYR TYR C . n C 3 19 ALA 19 352 352 ALA ALA C . n C 3 20 TRP 20 353 353 TRP TRP C . n C 3 21 ASN 21 354 354 ASN ASN C . n C 3 22 ARG 22 355 355 ARG ARG C . n C 3 23 LYS 23 356 356 LYS LYS C . n C 3 24 ARG 24 357 357 ARG ARG C . n C 3 25 ILE 25 358 358 ILE ILE C . n C 3 26 SER 26 359 359 SER SER C . n C 3 27 ASN 27 360 360 ASN ASN C . n C 3 28 CYS 28 361 361 CYS CYS C . n C 3 29 VAL 29 362 362 VAL VAL C . n C 3 30 ALA 30 363 363 ALA ALA C . n C 3 31 ASP 31 364 364 ASP ASP C . n C 3 32 TYR 32 365 365 TYR TYR C . n C 3 33 SER 33 366 366 SER SER C . n C 3 34 VAL 34 367 367 VAL VAL C . n C 3 35 LEU 35 368 368 LEU LEU C . n C 3 36 TYR 36 369 369 TYR TYR C . n C 3 37 ASN 37 370 370 ASN ASN C . n C 3 38 SER 38 371 371 SER SER C . n C 3 39 ALA 39 372 372 ALA ALA C . n C 3 40 SER 40 373 373 SER SER C . n C 3 41 PHE 41 374 374 PHE PHE C . n C 3 42 SER 42 375 375 SER SER C . n C 3 43 THR 43 376 376 THR THR C . n C 3 44 PHE 44 377 377 PHE PHE C . n C 3 45 LYS 45 378 378 LYS LYS C . n C 3 46 CYS 46 379 379 CYS CYS C . n C 3 47 TYR 47 380 380 TYR TYR C . n C 3 48 GLY 48 381 381 GLY GLY C . n C 3 49 VAL 49 382 382 VAL VAL C . n C 3 50 SER 50 383 383 SER SER C . n C 3 51 PRO 51 384 384 PRO PRO C . n C 3 52 THR 52 385 385 THR THR C . n C 3 53 LYS 53 386 386 LYS LYS C . n C 3 54 LEU 54 387 387 LEU LEU C . n C 3 55 ASN 55 388 388 ASN ASN C . n C 3 56 ASP 56 389 389 ASP ASP C . n C 3 57 LEU 57 390 390 LEU LEU C . n C 3 58 CYS 58 391 391 CYS CYS C . n C 3 59 PHE 59 392 392 PHE PHE C . n C 3 60 THR 60 393 393 THR THR C . n C 3 61 ASN 61 394 394 ASN ASN C . n C 3 62 VAL 62 395 395 VAL VAL C . n C 3 63 TYR 63 396 396 TYR TYR C . n C 3 64 ALA 64 397 397 ALA ALA C . n C 3 65 ASP 65 398 398 ASP ASP C . n C 3 66 SER 66 399 399 SER SER C . n C 3 67 PHE 67 400 400 PHE PHE C . n C 3 68 VAL 68 401 401 VAL VAL C . n C 3 69 ILE 69 402 402 ILE ILE C . n C 3 70 ARG 70 403 403 ARG ARG C . n C 3 71 GLY 71 404 404 GLY GLY C . n C 3 72 ASP 72 405 405 ASP ASP C . n C 3 73 GLU 73 406 406 GLU GLU C . n C 3 74 VAL 74 407 407 VAL VAL C . n C 3 75 ARG 75 408 408 ARG ARG C . n C 3 76 GLN 76 409 409 GLN GLN C . n C 3 77 ILE 77 410 410 ILE ILE C . n C 3 78 ALA 78 411 411 ALA ALA C . n C 3 79 PRO 79 412 412 PRO PRO C . n C 3 80 GLY 80 413 413 GLY GLY C . n C 3 81 GLN 81 414 414 GLN GLN C . n C 3 82 THR 82 415 415 THR THR C . n C 3 83 GLY 83 416 416 GLY GLY C . n C 3 84 LYS 84 417 417 LYS LYS C . n C 3 85 ILE 85 418 418 ILE ILE C . n C 3 86 ALA 86 419 419 ALA ALA C . n C 3 87 ASP 87 420 420 ASP ASP C . n C 3 88 TYR 88 421 421 TYR TYR C . n C 3 89 ASN 89 422 422 ASN ASN C . n C 3 90 TYR 90 423 423 TYR TYR C . n C 3 91 LYS 91 424 424 LYS LYS C . n C 3 92 LEU 92 425 425 LEU LEU C . n C 3 93 PRO 93 426 426 PRO PRO C . n C 3 94 ASP 94 427 427 ASP ASP C . n C 3 95 ASP 95 428 428 ASP ASP C . n C 3 96 PHE 96 429 429 PHE PHE C . n C 3 97 THR 97 430 430 THR THR C . n C 3 98 GLY 98 431 431 GLY GLY C . n C 3 99 CYS 99 432 432 CYS CYS C . n C 3 100 VAL 100 433 433 VAL VAL C . n C 3 101 ILE 101 434 434 ILE ILE C . n C 3 102 ALA 102 435 435 ALA ALA C . n C 3 103 TRP 103 436 436 TRP TRP C . n C 3 104 ASN 104 437 437 ASN ASN C . n C 3 105 SER 105 438 438 SER SER C . n C 3 106 ASN 106 439 439 ASN ASN C . n C 3 107 ASN 107 440 440 ASN ASN C . n C 3 108 LEU 108 441 441 LEU LEU C . n C 3 109 ASP 109 442 442 ASP ASP C . n C 3 110 SER 110 443 443 SER SER C . n C 3 111 LYS 111 444 444 LYS LYS C . n C 3 112 VAL 112 445 445 VAL VAL C . n C 3 113 GLY 113 446 446 GLY GLY C . n C 3 114 GLY 114 447 447 GLY GLY C . n C 3 115 ASN 115 448 448 ASN ASN C . n C 3 116 TYR 116 449 449 TYR TYR C . n C 3 117 ASN 117 450 450 ASN ASN C . n C 3 118 TYR 118 451 451 TYR TYR C . n C 3 119 LEU 119 452 452 LEU LEU C . n C 3 120 TYR 120 453 453 TYR TYR C . n C 3 121 ARG 121 454 454 ARG ARG C . n C 3 122 LEU 122 455 455 LEU LEU C . n C 3 123 PHE 123 456 456 PHE PHE C . n C 3 124 ARG 124 457 457 ARG ARG C . n C 3 125 LYS 125 458 458 LYS LYS C . n C 3 126 SER 126 459 459 SER SER C . n C 3 127 ASN 127 460 460 ASN ASN C . n C 3 128 LEU 128 461 461 LEU LEU C . n C 3 129 LYS 129 462 462 LYS LYS C . n C 3 130 PRO 130 463 463 PRO PRO C . n C 3 131 PHE 131 464 464 PHE PHE C . n C 3 132 GLU 132 465 465 GLU GLU C . n C 3 133 ARG 133 466 466 ARG ARG C . n C 3 134 ASP 134 467 467 ASP ASP C . n C 3 135 ILE 135 468 468 ILE ILE C . n C 3 136 SER 136 469 469 SER SER C . n C 3 137 THR 137 470 470 THR THR C . n C 3 138 GLU 138 471 471 GLU GLU C . n C 3 139 ILE 139 472 472 ILE ILE C . n C 3 140 TYR 140 473 473 TYR TYR C . n C 3 141 GLN 141 474 474 GLN GLN C . n C 3 142 ALA 142 475 475 ALA ALA C . n C 3 143 GLY 143 476 476 GLY GLY C . n C 3 144 SER 144 477 477 SER SER C . n C 3 145 THR 145 478 478 THR THR C . n C 3 146 PRO 146 479 479 PRO PRO C . n C 3 147 CYS 147 480 480 CYS CYS C . n C 3 148 ASN 148 481 481 ASN ASN C . n C 3 149 GLY 149 482 482 GLY GLY C . n C 3 150 VAL 150 483 483 VAL VAL C . n C 3 151 GLU 151 484 484 GLU GLU C . n C 3 152 GLY 152 485 485 GLY GLY C . n C 3 153 PHE 153 486 486 PHE PHE C . n C 3 154 ASN 154 487 487 ASN ASN C . n C 3 155 CYS 155 488 488 CYS CYS C . n C 3 156 TYR 156 489 489 TYR TYR C . n C 3 157 PHE 157 490 490 PHE PHE C . n C 3 158 PRO 158 491 491 PRO PRO C . n C 3 159 LEU 159 492 492 LEU LEU C . n C 3 160 GLN 160 493 493 GLN GLN C . n C 3 161 SER 161 494 494 SER SER C . n C 3 162 TYR 162 495 495 TYR TYR C . n C 3 163 GLY 163 496 496 GLY GLY C . n C 3 164 PHE 164 497 497 PHE PHE C . n C 3 165 GLN 165 498 498 GLN GLN C . n C 3 166 PRO 166 499 499 PRO PRO C . n C 3 167 THR 167 500 500 THR THR C . n C 3 168 ASN 168 501 501 ASN ASN C . n C 3 169 GLY 169 502 502 GLY GLY C . n C 3 170 VAL 170 503 503 VAL VAL C . n C 3 171 GLY 171 504 504 GLY GLY C . n C 3 172 TYR 172 505 505 TYR TYR C . n C 3 173 GLN 173 506 506 GLN GLN C . n C 3 174 PRO 174 507 507 PRO PRO C . n C 3 175 TYR 175 508 508 TYR TYR C . n C 3 176 ARG 176 509 509 ARG ARG C . n C 3 177 VAL 177 510 510 VAL VAL C . n C 3 178 VAL 178 511 511 VAL VAL C . n C 3 179 VAL 179 512 512 VAL VAL C . n C 3 180 LEU 180 513 513 LEU LEU C . n C 3 181 SER 181 514 514 SER SER C . n C 3 182 PHE 182 515 515 PHE PHE C . n C 3 183 GLU 183 516 516 GLU GLU C . n C 3 184 LEU 184 517 517 LEU LEU C . n C 3 185 LEU 185 518 518 LEU LEU C . n C 3 186 HIS 186 519 519 HIS HIS C . n C 3 187 ALA 187 520 520 ALA ALA C . n C 3 188 PRO 188 521 521 PRO PRO C . n C 3 189 ALA 189 522 522 ALA ALA C . n C 3 190 THR 190 523 523 THR THR C . n C 3 191 VAL 191 524 524 VAL VAL C . n C 3 192 CYS 192 525 525 CYS CYS C . n C 3 193 GLY 193 526 526 GLY GLY C . n C 3 194 PRO 194 527 527 PRO PRO C . n # _pdbx_nonpoly_scheme.asym_id D _pdbx_nonpoly_scheme.entity_id 4 _pdbx_nonpoly_scheme.mon_id NAG _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 601 _pdbx_nonpoly_scheme.auth_seq_num 528 _pdbx_nonpoly_scheme.pdb_mon_id NAG _pdbx_nonpoly_scheme.auth_mon_id NAG _pdbx_nonpoly_scheme.pdb_strand_id C _pdbx_nonpoly_scheme.pdb_ins_code . # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name PHENIX _software.os ? _software.os_version ? _software.type ? _software.version 1.17.1_3660: _software.pdbx_ordinal 1 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7WO7 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WO7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7WO7 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 7WO7 _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.002 ? 4999 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 1.079 ? 6817 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 16.706 ? 1776 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.040 ? 750 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.004 ? 885 ? f_plane_restr ? ? # _struct.entry_id 7WO7 _struct.title 'Locally refined region of SARS-CoV-2 Spike in complex with IgG 553-15' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7WO7 _struct_keywords.text 'SARS-COV-2, Spike, Antibody, Viral protein' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 7WO7 7WO7 ? 1 ? 1 2 PDB 7WO7 7WO7 ? 2 ? 1 3 UNP SPIKE_SARS2 P0DTC2 ? 3 ;NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQ SYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP ; 334 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7WO7 A 1 ? 225 ? 7WO7 1 ? 225 ? 1 225 2 2 7WO7 B 1 ? 218 ? 7WO7 1 ? 218 ? 1 218 3 3 7WO7 C 1 ? 194 ? P0DTC2 334 ? 527 ? 334 527 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 62 ? LYS A 65 ? ASP A 62 LYS A 65 5 ? 4 HELX_P HELX_P2 AA2 ARG A 87 ? THR A 91 ? ARG A 87 THR A 91 5 ? 5 HELX_P HELX_P3 AA3 LYS B 82 ? GLU B 86 ? LYS B 82 GLU B 86 5 ? 5 HELX_P HELX_P4 AA4 ASP C 31 ? LEU C 35 ? ASP C 364 LEU C 368 5 ? 5 HELX_P HELX_P5 AA5 SER C 50 ? LEU C 54 ? SER C 383 LEU C 387 5 ? 5 HELX_P HELX_P6 AA6 ASP C 72 ? ILE C 77 ? ASP C 405 ILE C 410 5 ? 6 HELX_P HELX_P7 AA7 GLY C 169 ? TYR C 172 ? GLY C 502 TYR C 505 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 96 SG ? ? A CYS 22 A CYS 96 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf2 disulf ? ? A CYS 146 SG ? ? ? 1_555 A CYS 202 SG ? ? A CYS 146 A CYS 202 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf3 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 91 SG ? ? B CYS 22 B CYS 91 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf4 disulf ? ? B CYS 140 SG ? ? ? 1_555 B CYS 199 SG ? ? B CYS 140 B CYS 199 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf5 disulf ? ? C CYS 3 SG ? ? ? 1_555 C CYS 28 SG ? ? C CYS 336 C CYS 361 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf6 disulf ? ? C CYS 46 SG ? ? ? 1_555 C CYS 99 SG ? ? C CYS 379 C CYS 432 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf7 disulf ? ? C CYS 58 SG ? ? ? 1_555 C CYS 192 SG ? ? C CYS 391 C CYS 525 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf8 disulf ? ? C CYS 147 SG ? ? ? 1_555 C CYS 155 SG ? ? C CYS 480 C CYS 488 1_555 ? ? ? ? ? ? ? 2.031 ? ? covale1 covale one ? C ASN 10 ND2 ? ? ? 1_555 D NAG . C1 ? ? C ASN 343 C NAG 601 1_555 ? ? ? ? ? ? ? 1.440 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG D . ? ASN C 10 ? NAG C 601 ? 1_555 ASN C 343 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 CYS A 22 ? CYS A 96 ? CYS A 22 ? 1_555 CYS A 96 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS A 146 ? CYS A 202 ? CYS A 146 ? 1_555 CYS A 202 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS B 22 ? CYS B 91 ? CYS B 22 ? 1_555 CYS B 91 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS B 140 ? CYS B 199 ? CYS B 140 ? 1_555 CYS B 199 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS C 3 ? CYS C 28 ? CYS C 336 ? 1_555 CYS C 361 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 CYS C 46 ? CYS C 99 ? CYS C 379 ? 1_555 CYS C 432 ? 1_555 SG SG . . . None 'Disulfide bridge' 8 CYS C 58 ? CYS C 192 ? CYS C 391 ? 1_555 CYS C 525 ? 1_555 SG SG . . . None 'Disulfide bridge' 9 CYS C 147 ? CYS C 155 ? CYS C 480 ? 1_555 CYS C 488 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 6 ? AA3 ? 5 ? AA4 ? 4 ? AA5 ? 2 ? AA6 ? 2 ? AA7 ? 5 ? AA8 ? 4 ? AA9 ? 2 ? AB1 ? 2 ? AB2 ? 5 ? AB3 ? 2 ? AB4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel AA6 1 2 ? anti-parallel AA7 1 2 ? parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel AA7 4 5 ? anti-parallel AA8 1 2 ? parallel AA8 2 3 ? anti-parallel AA8 3 4 ? anti-parallel AA9 1 2 ? anti-parallel AB1 1 2 ? anti-parallel AB2 1 2 ? anti-parallel AB2 2 3 ? anti-parallel AB2 3 4 ? anti-parallel AB2 4 5 ? anti-parallel AB3 1 2 ? anti-parallel AB4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 3 ? SER A 7 ? GLN A 3 SER A 7 AA1 2 ARG A 19 ? SER A 25 ? ARG A 19 SER A 25 AA1 3 SER A 78 ? MET A 83 ? SER A 78 MET A 83 AA1 4 PHE A 68 ? ARG A 72 ? PHE A 68 ARG A 72 AA2 1 GLY A 10 ? LEU A 11 ? GLY A 10 LEU A 11 AA2 2 THR A 113 ? THR A 116 ? THR A 113 THR A 116 AA2 3 ALA A 92 ? TYR A 94 ? ALA A 92 TYR A 94 AA2 4 TRP A 33 ? GLN A 39 ? TRP A 33 GLN A 39 AA2 5 LEU A 45 ? ILE A 51 ? LEU A 45 ILE A 51 AA2 6 LYS A 58 ? TYR A 60 ? LYS A 58 TYR A 60 AA3 1 GLY A 10 ? LEU A 11 ? GLY A 10 LEU A 11 AA3 2 THR A 113 ? THR A 116 ? THR A 113 THR A 116 AA3 3 ALA A 92 ? TYR A 94 ? ALA A 92 TYR A 94 AA3 4 TRP A 33 ? GLN A 39 ? TRP A 33 GLN A 39 AA3 5 ALA A 97 ? VAL A 99 ? ALA A 97 VAL A 99 AA4 1 VAL A 127 ? PRO A 129 ? VAL A 127 PRO A 129 AA4 2 LEU A 144 ? VAL A 148 ? LEU A 144 VAL A 148 AA4 3 LEU A 184 ? VAL A 188 ? LEU A 184 VAL A 188 AA4 4 VAL A 169 ? PHE A 172 ? VAL A 169 PHE A 172 AA5 1 ILE A 201 ? CYS A 202 ? ILE A 201 CYS A 202 AA5 2 LYS A 215 ? ARG A 216 ? LYS A 215 ARG A 216 AA6 1 MET B 4 ? THR B 5 ? MET B 4 THR B 5 AA6 2 THR B 23 ? ARG B 24 ? THR B 23 ARG B 24 AA7 1 SER B 9 ? GLU B 12 ? SER B 9 GLU B 12 AA7 2 THR B 107 ? VAL B 111 ? THR B 107 VAL B 111 AA7 3 ASP B 88 ? TYR B 94 ? ASP B 88 TYR B 94 AA7 4 VAL B 34 ? GLN B 39 ? VAL B 34 GLN B 39 AA7 5 THR B 46 ? ILE B 49 ? THR B 46 ILE B 49 AA8 1 SER B 9 ? GLU B 12 ? SER B 9 GLU B 12 AA8 2 THR B 107 ? VAL B 111 ? THR B 107 VAL B 111 AA8 3 ASP B 88 ? TYR B 94 ? ASP B 88 TYR B 94 AA8 4 VAL B 101 ? PHE B 103 ? VAL B 101 PHE B 103 AA9 1 VAL B 18 ? ILE B 20 ? VAL B 18 ILE B 20 AA9 2 LEU B 76 ? ILE B 78 ? LEU B 76 ILE B 78 AB1 1 TYR B 197 ? CYS B 199 ? TYR B 197 CYS B 199 AB1 2 LYS B 210 ? VAL B 212 ? LYS B 210 VAL B 212 AB2 1 ASN C 21 ? ARG C 22 ? ASN C 354 ARG C 355 AB2 2 VAL C 62 ? ARG C 70 ? VAL C 395 ARG C 403 AB2 3 PRO C 174 ? PHE C 182 ? PRO C 507 PHE C 515 AB2 4 CYS C 99 ? ASN C 104 ? CYS C 432 ASN C 437 AB2 5 THR C 43 ? CYS C 46 ? THR C 376 CYS C 379 AB3 1 LEU C 119 ? ARG C 121 ? LEU C 452 ARG C 454 AB3 2 LEU C 159 ? SER C 161 ? LEU C 492 SER C 494 AB4 1 TYR C 140 ? GLN C 141 ? TYR C 473 GLN C 474 AB4 2 CYS C 155 ? TYR C 156 ? CYS C 488 TYR C 489 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N SER A 7 ? N SER A 7 O SER A 21 ? O SER A 21 AA1 2 3 N CYS A 22 ? N CYS A 22 O LEU A 79 ? O LEU A 79 AA1 3 4 O PHE A 80 ? O PHE A 80 N SER A 71 ? N SER A 71 AA2 1 2 N GLY A 10 ? N GLY A 10 O THR A 116 ? O THR A 116 AA2 2 3 O VAL A 115 ? O VAL A 115 N ALA A 92 ? N ALA A 92 AA2 3 4 O VAL A 93 ? O VAL A 93 N GLN A 39 ? N GLN A 39 AA2 4 5 N MET A 34 ? N MET A 34 O ILE A 51 ? O ILE A 51 AA2 5 6 N ASN A 50 ? N ASN A 50 O TYR A 59 ? O TYR A 59 AA3 1 2 N GLY A 10 ? N GLY A 10 O THR A 116 ? O THR A 116 AA3 2 3 O VAL A 115 ? O VAL A 115 N ALA A 92 ? N ALA A 92 AA3 3 4 O VAL A 93 ? O VAL A 93 N GLN A 39 ? N GLN A 39 AA3 4 5 N TRP A 33 ? N TRP A 33 O VAL A 99 ? O VAL A 99 AA4 1 2 N PHE A 128 ? N PHE A 128 O LEU A 147 ? O LEU A 147 AA4 2 3 N VAL A 148 ? N VAL A 148 O LEU A 184 ? O LEU A 184 AA4 3 4 O VAL A 187 ? O VAL A 187 N HIS A 170 ? N HIS A 170 AA5 1 2 N CYS A 202 ? N CYS A 202 O LYS A 215 ? O LYS A 215 AA6 1 2 N THR B 5 ? N THR B 5 O THR B 23 ? O THR B 23 AA7 1 2 N VAL B 10 ? N VAL B 10 O THR B 110 ? O THR B 110 AA7 2 3 O THR B 107 ? O THR B 107 N TYR B 89 ? N TYR B 89 AA7 3 4 O TYR B 90 ? O TYR B 90 N TYR B 37 ? N TYR B 37 AA7 4 5 N GLN B 38 ? N GLN B 38 O THR B 46 ? O THR B 46 AA8 1 2 N VAL B 10 ? N VAL B 10 O THR B 110 ? O THR B 110 AA8 2 3 O THR B 107 ? O THR B 107 N TYR B 89 ? N TYR B 89 AA8 3 4 N SER B 93 ? N SER B 93 O VAL B 102 ? O VAL B 102 AA9 1 2 N VAL B 18 ? N VAL B 18 O ILE B 78 ? O ILE B 78 AB1 1 2 N TYR B 197 ? N TYR B 197 O VAL B 212 ? O VAL B 212 AB2 1 2 N ASN C 21 ? N ASN C 354 O SER C 66 ? O SER C 399 AB2 2 3 N ILE C 69 ? N ILE C 402 O TYR C 175 ? O TYR C 508 AB2 3 4 O VAL C 178 ? O VAL C 511 N ILE C 101 ? N ILE C 434 AB2 4 5 O VAL C 100 ? O VAL C 433 N LYS C 45 ? N LYS C 378 AB3 1 2 N TYR C 120 ? N TYR C 453 O GLN C 160 ? O GLN C 493 AB4 1 2 N TYR C 140 ? N TYR C 473 O TYR C 156 ? O TYR C 489 # _pdbx_entry_details.entry_id 7WO7 _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 LYS _pdbx_validate_close_contact.auth_seq_id_1 155 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OG _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 SER _pdbx_validate_close_contact.auth_seq_id_2 198 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.16 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 48 ? ? -120.98 -62.21 2 1 TYR A 103 ? ? -92.01 50.30 3 1 SER A 119 ? ? -98.97 -143.94 4 1 ALA A 120 ? ? 70.76 159.65 5 1 ALA A 131 ? ? 52.88 74.30 6 1 SER A 133 ? ? -120.55 -53.80 7 1 SER A 178 ? ? -104.81 -65.15 8 1 THR A 211 ? ? -92.90 54.76 9 1 ASP A 223 ? ? -82.99 -71.06 10 1 ASN B 32 ? ? -122.65 -168.83 11 1 ASP B 52 ? ? 67.51 -4.95 12 1 PRO B 126 ? ? -68.31 -176.98 13 1 ASN B 134 ? ? -161.65 98.53 14 1 ALA B 156 ? ? -81.95 48.63 15 1 ASP B 157 ? ? 67.32 -7.79 16 1 SER B 158 ? ? -140.44 -4.97 17 1 ASN B 175 ? ? -92.26 52.47 18 1 SER C 383 ? ? 53.91 77.58 19 1 LYS C 386 ? ? -98.25 58.75 20 1 SER C 399 ? ? -160.58 116.73 21 1 ALA C 411 ? ? -171.28 149.11 22 1 ALA C 419 ? ? -132.05 -36.56 23 1 ASP C 427 ? ? -91.75 47.84 24 1 PHE C 429 ? ? 39.12 64.29 25 1 SER C 459 ? ? -162.78 -169.27 26 1 PRO C 499 ? ? -82.13 43.07 # _em_3d_fitting.entry_id 7WO7 _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol ? _em_3d_fitting.ref_space ? _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 7WO7 _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 199441 _em_3d_reconstruction.resolution 3.80 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 8.0 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name 'Spike with mAb15' _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.entity_id_list '1, 2, 3' _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_imaging.id 1 _em_imaging.entry_id 7WO7 _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen ? _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max 2500 _em_imaging.nominal_defocus_min 1200 _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature ? _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity ? _em_vitrification.instrument ? _em_vitrification.entry_id 7WO7 _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 7WO7 _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B ASP 1 ? B ASP 1 2 1 Y 1 B CYS 217 ? B CYS 217 3 1 Y 1 B SER 218 ? B SER 218 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 NAG C1 C N R 247 NAG C2 C N R 248 NAG C3 C N R 249 NAG C4 C N S 250 NAG C5 C N R 251 NAG C6 C N N 252 NAG C7 C N N 253 NAG C8 C N N 254 NAG N2 N N N 255 NAG O1 O N N 256 NAG O3 O N N 257 NAG O4 O N N 258 NAG O5 O N N 259 NAG O6 O N N 260 NAG O7 O N N 261 NAG H1 H N N 262 NAG H2 H N N 263 NAG H3 H N N 264 NAG H4 H N N 265 NAG H5 H N N 266 NAG H61 H N N 267 NAG H62 H N N 268 NAG H81 H N N 269 NAG H82 H N N 270 NAG H83 H N N 271 NAG HN2 H N N 272 NAG HO1 H N N 273 NAG HO3 H N N 274 NAG HO4 H N N 275 NAG HO6 H N N 276 PHE N N N N 277 PHE CA C N S 278 PHE C C N N 279 PHE O O N N 280 PHE CB C N N 281 PHE CG C Y N 282 PHE CD1 C Y N 283 PHE CD2 C Y N 284 PHE CE1 C Y N 285 PHE CE2 C Y N 286 PHE CZ C Y N 287 PHE OXT O N N 288 PHE H H N N 289 PHE H2 H N N 290 PHE HA H N N 291 PHE HB2 H N N 292 PHE HB3 H N N 293 PHE HD1 H N N 294 PHE HD2 H N N 295 PHE HE1 H N N 296 PHE HE2 H N N 297 PHE HZ H N N 298 PHE HXT H N N 299 PRO N N N N 300 PRO CA C N S 301 PRO C C N N 302 PRO O O N N 303 PRO CB C N N 304 PRO CG C N N 305 PRO CD C N N 306 PRO OXT O N N 307 PRO H H N N 308 PRO HA H N N 309 PRO HB2 H N N 310 PRO HB3 H N N 311 PRO HG2 H N N 312 PRO HG3 H N N 313 PRO HD2 H N N 314 PRO HD3 H N N 315 PRO HXT H N N 316 SER N N N N 317 SER CA C N S 318 SER C C N N 319 SER O O N N 320 SER CB C N N 321 SER OG O N N 322 SER OXT O N N 323 SER H H N N 324 SER H2 H N N 325 SER HA H N N 326 SER HB2 H N N 327 SER HB3 H N N 328 SER HG H N N 329 SER HXT H N N 330 THR N N N N 331 THR CA C N S 332 THR C C N N 333 THR O O N N 334 THR CB C N R 335 THR OG1 O N N 336 THR CG2 C N N 337 THR OXT O N N 338 THR H H N N 339 THR H2 H N N 340 THR HA H N N 341 THR HB H N N 342 THR HG1 H N N 343 THR HG21 H N N 344 THR HG22 H N N 345 THR HG23 H N N 346 THR HXT H N N 347 TRP N N N N 348 TRP CA C N S 349 TRP C C N N 350 TRP O O N N 351 TRP CB C N N 352 TRP CG C Y N 353 TRP CD1 C Y N 354 TRP CD2 C Y N 355 TRP NE1 N Y N 356 TRP CE2 C Y N 357 TRP CE3 C Y N 358 TRP CZ2 C Y N 359 TRP CZ3 C Y N 360 TRP CH2 C Y N 361 TRP OXT O N N 362 TRP H H N N 363 TRP H2 H N N 364 TRP HA H N N 365 TRP HB2 H N N 366 TRP HB3 H N N 367 TRP HD1 H N N 368 TRP HE1 H N N 369 TRP HE3 H N N 370 TRP HZ2 H N N 371 TRP HZ3 H N N 372 TRP HH2 H N N 373 TRP HXT H N N 374 TYR N N N N 375 TYR CA C N S 376 TYR C C N N 377 TYR O O N N 378 TYR CB C N N 379 TYR CG C Y N 380 TYR CD1 C Y N 381 TYR CD2 C Y N 382 TYR CE1 C Y N 383 TYR CE2 C Y N 384 TYR CZ C Y N 385 TYR OH O N N 386 TYR OXT O N N 387 TYR H H N N 388 TYR H2 H N N 389 TYR HA H N N 390 TYR HB2 H N N 391 TYR HB3 H N N 392 TYR HD1 H N N 393 TYR HD2 H N N 394 TYR HE1 H N N 395 TYR HE2 H N N 396 TYR HH H N N 397 TYR HXT H N N 398 VAL N N N N 399 VAL CA C N S 400 VAL C C N N 401 VAL O O N N 402 VAL CB C N N 403 VAL CG1 C N N 404 VAL CG2 C N N 405 VAL OXT O N N 406 VAL H H N N 407 VAL H2 H N N 408 VAL HA H N N 409 VAL HB H N N 410 VAL HG11 H N N 411 VAL HG12 H N N 412 VAL HG13 H N N 413 VAL HG21 H N N 414 VAL HG22 H N N 415 VAL HG23 H N N 416 VAL HXT H N N 417 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 NAG C1 C2 sing N N 235 NAG C1 O1 sing N N 236 NAG C1 O5 sing N N 237 NAG C1 H1 sing N N 238 NAG C2 C3 sing N N 239 NAG C2 N2 sing N N 240 NAG C2 H2 sing N N 241 NAG C3 C4 sing N N 242 NAG C3 O3 sing N N 243 NAG C3 H3 sing N N 244 NAG C4 C5 sing N N 245 NAG C4 O4 sing N N 246 NAG C4 H4 sing N N 247 NAG C5 C6 sing N N 248 NAG C5 O5 sing N N 249 NAG C5 H5 sing N N 250 NAG C6 O6 sing N N 251 NAG C6 H61 sing N N 252 NAG C6 H62 sing N N 253 NAG C7 C8 sing N N 254 NAG C7 N2 sing N N 255 NAG C7 O7 doub N N 256 NAG C8 H81 sing N N 257 NAG C8 H82 sing N N 258 NAG C8 H83 sing N N 259 NAG N2 HN2 sing N N 260 NAG O1 HO1 sing N N 261 NAG O3 HO3 sing N N 262 NAG O4 HO4 sing N N 263 NAG O6 HO6 sing N N 264 PHE N CA sing N N 265 PHE N H sing N N 266 PHE N H2 sing N N 267 PHE CA C sing N N 268 PHE CA CB sing N N 269 PHE CA HA sing N N 270 PHE C O doub N N 271 PHE C OXT sing N N 272 PHE CB CG sing N N 273 PHE CB HB2 sing N N 274 PHE CB HB3 sing N N 275 PHE CG CD1 doub Y N 276 PHE CG CD2 sing Y N 277 PHE CD1 CE1 sing Y N 278 PHE CD1 HD1 sing N N 279 PHE CD2 CE2 doub Y N 280 PHE CD2 HD2 sing N N 281 PHE CE1 CZ doub Y N 282 PHE CE1 HE1 sing N N 283 PHE CE2 CZ sing Y N 284 PHE CE2 HE2 sing N N 285 PHE CZ HZ sing N N 286 PHE OXT HXT sing N N 287 PRO N CA sing N N 288 PRO N CD sing N N 289 PRO N H sing N N 290 PRO CA C sing N N 291 PRO CA CB sing N N 292 PRO CA HA sing N N 293 PRO C O doub N N 294 PRO C OXT sing N N 295 PRO CB CG sing N N 296 PRO CB HB2 sing N N 297 PRO CB HB3 sing N N 298 PRO CG CD sing N N 299 PRO CG HG2 sing N N 300 PRO CG HG3 sing N N 301 PRO CD HD2 sing N N 302 PRO CD HD3 sing N N 303 PRO OXT HXT sing N N 304 SER N CA sing N N 305 SER N H sing N N 306 SER N H2 sing N N 307 SER CA C sing N N 308 SER CA CB sing N N 309 SER CA HA sing N N 310 SER C O doub N N 311 SER C OXT sing N N 312 SER CB OG sing N N 313 SER CB HB2 sing N N 314 SER CB HB3 sing N N 315 SER OG HG sing N N 316 SER OXT HXT sing N N 317 THR N CA sing N N 318 THR N H sing N N 319 THR N H2 sing N N 320 THR CA C sing N N 321 THR CA CB sing N N 322 THR CA HA sing N N 323 THR C O doub N N 324 THR C OXT sing N N 325 THR CB OG1 sing N N 326 THR CB CG2 sing N N 327 THR CB HB sing N N 328 THR OG1 HG1 sing N N 329 THR CG2 HG21 sing N N 330 THR CG2 HG22 sing N N 331 THR CG2 HG23 sing N N 332 THR OXT HXT sing N N 333 TRP N CA sing N N 334 TRP N H sing N N 335 TRP N H2 sing N N 336 TRP CA C sing N N 337 TRP CA CB sing N N 338 TRP CA HA sing N N 339 TRP C O doub N N 340 TRP C OXT sing N N 341 TRP CB CG sing N N 342 TRP CB HB2 sing N N 343 TRP CB HB3 sing N N 344 TRP CG CD1 doub Y N 345 TRP CG CD2 sing Y N 346 TRP CD1 NE1 sing Y N 347 TRP CD1 HD1 sing N N 348 TRP CD2 CE2 doub Y N 349 TRP CD2 CE3 sing Y N 350 TRP NE1 CE2 sing Y N 351 TRP NE1 HE1 sing N N 352 TRP CE2 CZ2 sing Y N 353 TRP CE3 CZ3 doub Y N 354 TRP CE3 HE3 sing N N 355 TRP CZ2 CH2 doub Y N 356 TRP CZ2 HZ2 sing N N 357 TRP CZ3 CH2 sing Y N 358 TRP CZ3 HZ3 sing N N 359 TRP CH2 HH2 sing N N 360 TRP OXT HXT sing N N 361 TYR N CA sing N N 362 TYR N H sing N N 363 TYR N H2 sing N N 364 TYR CA C sing N N 365 TYR CA CB sing N N 366 TYR CA HA sing N N 367 TYR C O doub N N 368 TYR C OXT sing N N 369 TYR CB CG sing N N 370 TYR CB HB2 sing N N 371 TYR CB HB3 sing N N 372 TYR CG CD1 doub Y N 373 TYR CG CD2 sing Y N 374 TYR CD1 CE1 sing Y N 375 TYR CD1 HD1 sing N N 376 TYR CD2 CE2 doub Y N 377 TYR CD2 HD2 sing N N 378 TYR CE1 CZ doub Y N 379 TYR CE1 HE1 sing N N 380 TYR CE2 CZ sing Y N 381 TYR CE2 HE2 sing N N 382 TYR CZ OH sing N N 383 TYR OH HH sing N N 384 TYR OXT HXT sing N N 385 VAL N CA sing N N 386 VAL N H sing N N 387 VAL N H2 sing N N 388 VAL CA C sing N N 389 VAL CA CB sing N N 390 VAL CA HA sing N N 391 VAL C O doub N N 392 VAL C OXT sing N N 393 VAL CB CG1 sing N N 394 VAL CB CG2 sing N N 395 VAL CB HB sing N N 396 VAL CG1 HG11 sing N N 397 VAL CG1 HG12 sing N N 398 VAL CG1 HG13 sing N N 399 VAL CG2 HG21 sing N N 400 VAL CG2 HG22 sing N N 401 VAL CG2 HG23 sing N N 402 VAL OXT HXT sing N N 403 # _em_admin.entry_id 7WO7 _em_admin.current_status REL _em_admin.deposition_date 2022-01-20 _em_admin.deposition_site PDBJ _em_admin.last_update 2024-11-13 _em_admin.map_release_date 2022-07-20 _em_admin.title 'Locally refined region of SARS-CoV-2 Spike in complex with IgG 553-15' # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 2697049 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Severe acute respiratory syndrome coronavirus 2' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 61 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? _em_image_recording.avg_electron_dose_per_subtomogram ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' ? ? ? 1 ? ? 2 'IMAGE ACQUISITION' ? ? ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? ? ? 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? ? ? ? ? ? 8 'MODEL REFINEMENT' ? ? ? ? ? ? 9 OTHER ? ? ? ? ? ? 10 'INITIAL EULER ASSIGNMENT' ? ? ? 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? ? ? 1 ? ? 12 CLASSIFICATION ? ? ? 1 ? ? 13 RECONSTRUCTION ? ? ? 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Ministry of Science and Technology (MoST, China)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 2021YFC2302500 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 7WO7 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_