data_7WRO # _entry.id 7WRO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.359 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7WRO pdb_00007wro 10.2210/pdb7wro/pdb WWPDB D_1300027302 ? ? EMDB EMD-32734 ? ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'local structure of BD55-3372 and delta spike' _pdbx_database_related.db_id EMD-32734 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7WRO _pdbx_database_status.recvd_initial_deposition_date 2022-01-27 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _audit_author.name 'Liu, P.L.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nature _citation.journal_id_ASTM NATUAS _citation.journal_id_CSD 0006 _citation.journal_id_ISSN 1476-4687 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 608 _citation.language ? _citation.page_first 593 _citation.page_last 602 _citation.title 'BA.2.12.1, BA.4 and BA.5 escape antibodies elicited by Omicron infection.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41586-022-04980-y _citation.pdbx_database_id_PubMed 35714668 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cao, Y.' 1 ? primary 'Yisimayi, A.' 2 ? primary 'Jian, F.' 3 ? primary 'Song, W.' 4 ? primary 'Xiao, T.' 5 ? primary 'Wang, L.' 6 ? primary 'Du, S.' 7 ? primary 'Wang, J.' 8 ? primary 'Li, Q.' 9 ? primary 'Chen, X.' 10 ? primary 'Yu, Y.' 11 ? primary 'Wang, P.' 12 ? primary 'Zhang, Z.' 13 ? primary 'Liu, P.' 14 ? primary 'An, R.' 15 ? primary 'Hao, X.' 16 ? primary 'Wang, Y.' 17 ? primary 'Wang, J.' 18 ? primary 'Feng, R.' 19 ? primary 'Sun, H.' 20 ? primary 'Zhao, L.' 21 ? primary 'Zhang, W.' 22 ? primary 'Zhao, D.' 23 ? primary 'Zheng, J.' 24 ? primary 'Yu, L.' 25 ? primary 'Li, C.' 26 ? primary 'Zhang, N.' 27 ? primary 'Wang, R.' 28 ? primary 'Niu, X.' 29 ? primary 'Yang, S.' 30 ? primary 'Song, X.' 31 ? primary 'Chai, Y.' 32 ? primary 'Hu, Y.' 33 ? primary 'Shi, Y.' 34 ? primary 'Zheng, L.' 35 ? primary 'Li, Z.' 36 ? primary 'Gu, Q.' 37 ? primary 'Shao, F.' 38 ? primary 'Huang, W.' 39 ? primary 'Jin, R.' 40 ? primary 'Shen, Z.' 41 ? primary 'Wang, Y.' 42 ? primary 'Wang, X.' 43 ? primary 'Xiao, J.' 44 ? primary 'Xie, X.S.' 45 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7WRO _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WRO _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 3372H 13028.431 1 ? ? ? ? 2 polymer man 3372L 11353.436 1 ? ? ? ? 3 polymer man 'Spike protein S1' 20783.223 1 ? ? RBD ? # _entity_name_com.entity_id 3 _entity_name_com.name 'S glycoprotein,E2,Peplomer protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;EVHLVESGGGLVKPGGSLRLSCAASGFTFSNYAMNWVRQAPGKGLQWVSSITGSSSFIFYADSVKGRFTIVRDNAQNSLY LQMNSLRDEDTAVYYCARERDDYDTRLDWGQGTLVTVS ; ;EVHLVESGGGLVKPGGSLRLSCAASGFTFSNYAMNWVRQAPGKGLQWVSSITGSSSFIFYADSVKGRFTIVRDNAQNSLY LQMNSLRDEDTAVYYCARERDDYDTRLDWGQGTLVTVS ; H ? 2 'polypeptide(L)' no no ;PMLTQPPSVSGAPGQTVTISCVGSSSNIGAGYEVHWYQQLPGTAPKRLLSGNSDRPSGVPDRFSGSKSGTSASLAITGLQ ADDEADYYCQSYDSSLSLSAVVFGGGTKLTV ; ;PMLTQPPSVSGAPGQTVTISCVGSSSNIGAGYEVHWYQQLPGTAPKRLLSGNSDRPSGVPDRFSGSKSGTSASLAITGLQ ADDEADYYCQSYDSSLSLSAVVFGGGTKLTV ; L ? 3 'polypeptide(L)' no no ;NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYRYRLFRKSNLKPFERDISTEIYQAGSKPCNGVEGFNCYFPLQ SYGFQPTNGVGYQPYRVVVLSFE ; ;NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYRYRLFRKSNLKPFERDISTEIYQAGSKPCNGVEGFNCYFPLQ SYGFQPTNGVGYQPYRVVVLSFE ; R ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 VAL n 1 3 HIS n 1 4 LEU n 1 5 VAL n 1 6 GLU n 1 7 SER n 1 8 GLY n 1 9 GLY n 1 10 GLY n 1 11 LEU n 1 12 VAL n 1 13 LYS n 1 14 PRO n 1 15 GLY n 1 16 GLY n 1 17 SER n 1 18 LEU n 1 19 ARG n 1 20 LEU n 1 21 SER n 1 22 CYS n 1 23 ALA n 1 24 ALA n 1 25 SER n 1 26 GLY n 1 27 PHE n 1 28 THR n 1 29 PHE n 1 30 SER n 1 31 ASN n 1 32 TYR n 1 33 ALA n 1 34 MET n 1 35 ASN n 1 36 TRP n 1 37 VAL n 1 38 ARG n 1 39 GLN n 1 40 ALA n 1 41 PRO n 1 42 GLY n 1 43 LYS n 1 44 GLY n 1 45 LEU n 1 46 GLN n 1 47 TRP n 1 48 VAL n 1 49 SER n 1 50 SER n 1 51 ILE n 1 52 THR n 1 53 GLY n 1 54 SER n 1 55 SER n 1 56 SER n 1 57 PHE n 1 58 ILE n 1 59 PHE n 1 60 TYR n 1 61 ALA n 1 62 ASP n 1 63 SER n 1 64 VAL n 1 65 LYS n 1 66 GLY n 1 67 ARG n 1 68 PHE n 1 69 THR n 1 70 ILE n 1 71 VAL n 1 72 ARG n 1 73 ASP n 1 74 ASN n 1 75 ALA n 1 76 GLN n 1 77 ASN n 1 78 SER n 1 79 LEU n 1 80 TYR n 1 81 LEU n 1 82 GLN n 1 83 MET n 1 84 ASN n 1 85 SER n 1 86 LEU n 1 87 ARG n 1 88 ASP n 1 89 GLU n 1 90 ASP n 1 91 THR n 1 92 ALA n 1 93 VAL n 1 94 TYR n 1 95 TYR n 1 96 CYS n 1 97 ALA n 1 98 ARG n 1 99 GLU n 1 100 ARG n 1 101 ASP n 1 102 ASP n 1 103 TYR n 1 104 ASP n 1 105 THR n 1 106 ARG n 1 107 LEU n 1 108 ASP n 1 109 TRP n 1 110 GLY n 1 111 GLN n 1 112 GLY n 1 113 THR n 1 114 LEU n 1 115 VAL n 1 116 THR n 1 117 VAL n 1 118 SER n 2 1 PRO n 2 2 MET n 2 3 LEU n 2 4 THR n 2 5 GLN n 2 6 PRO n 2 7 PRO n 2 8 SER n 2 9 VAL n 2 10 SER n 2 11 GLY n 2 12 ALA n 2 13 PRO n 2 14 GLY n 2 15 GLN n 2 16 THR n 2 17 VAL n 2 18 THR n 2 19 ILE n 2 20 SER n 2 21 CYS n 2 22 VAL n 2 23 GLY n 2 24 SER n 2 25 SER n 2 26 SER n 2 27 ASN n 2 28 ILE n 2 29 GLY n 2 30 ALA n 2 31 GLY n 2 32 TYR n 2 33 GLU n 2 34 VAL n 2 35 HIS n 2 36 TRP n 2 37 TYR n 2 38 GLN n 2 39 GLN n 2 40 LEU n 2 41 PRO n 2 42 GLY n 2 43 THR n 2 44 ALA n 2 45 PRO n 2 46 LYS n 2 47 ARG n 2 48 LEU n 2 49 LEU n 2 50 SER n 2 51 GLY n 2 52 ASN n 2 53 SER n 2 54 ASP n 2 55 ARG n 2 56 PRO n 2 57 SER n 2 58 GLY n 2 59 VAL n 2 60 PRO n 2 61 ASP n 2 62 ARG n 2 63 PHE n 2 64 SER n 2 65 GLY n 2 66 SER n 2 67 LYS n 2 68 SER n 2 69 GLY n 2 70 THR n 2 71 SER n 2 72 ALA n 2 73 SER n 2 74 LEU n 2 75 ALA n 2 76 ILE n 2 77 THR n 2 78 GLY n 2 79 LEU n 2 80 GLN n 2 81 ALA n 2 82 ASP n 2 83 ASP n 2 84 GLU n 2 85 ALA n 2 86 ASP n 2 87 TYR n 2 88 TYR n 2 89 CYS n 2 90 GLN n 2 91 SER n 2 92 TYR n 2 93 ASP n 2 94 SER n 2 95 SER n 2 96 LEU n 2 97 SER n 2 98 LEU n 2 99 SER n 2 100 ALA n 2 101 VAL n 2 102 VAL n 2 103 PHE n 2 104 GLY n 2 105 GLY n 2 106 GLY n 2 107 THR n 2 108 LYS n 2 109 LEU n 2 110 THR n 2 111 VAL n 3 1 ASN n 3 2 LEU n 3 3 CYS n 3 4 PRO n 3 5 PHE n 3 6 GLY n 3 7 GLU n 3 8 VAL n 3 9 PHE n 3 10 ASN n 3 11 ALA n 3 12 THR n 3 13 ARG n 3 14 PHE n 3 15 ALA n 3 16 SER n 3 17 VAL n 3 18 TYR n 3 19 ALA n 3 20 TRP n 3 21 ASN n 3 22 ARG n 3 23 LYS n 3 24 ARG n 3 25 ILE n 3 26 SER n 3 27 ASN n 3 28 CYS n 3 29 VAL n 3 30 ALA n 3 31 ASP n 3 32 TYR n 3 33 SER n 3 34 VAL n 3 35 LEU n 3 36 TYR n 3 37 ASN n 3 38 SER n 3 39 ALA n 3 40 SER n 3 41 PHE n 3 42 SER n 3 43 THR n 3 44 PHE n 3 45 LYS n 3 46 CYS n 3 47 TYR n 3 48 GLY n 3 49 VAL n 3 50 SER n 3 51 PRO n 3 52 THR n 3 53 LYS n 3 54 LEU n 3 55 ASN n 3 56 ASP n 3 57 LEU n 3 58 CYS n 3 59 PHE n 3 60 THR n 3 61 ASN n 3 62 VAL n 3 63 TYR n 3 64 ALA n 3 65 ASP n 3 66 SER n 3 67 PHE n 3 68 VAL n 3 69 ILE n 3 70 ARG n 3 71 GLY n 3 72 ASP n 3 73 GLU n 3 74 VAL n 3 75 ARG n 3 76 GLN n 3 77 ILE n 3 78 ALA n 3 79 PRO n 3 80 GLY n 3 81 GLN n 3 82 THR n 3 83 GLY n 3 84 LYS n 3 85 ILE n 3 86 ALA n 3 87 ASP n 3 88 TYR n 3 89 ASN n 3 90 TYR n 3 91 LYS n 3 92 LEU n 3 93 PRO n 3 94 ASP n 3 95 ASP n 3 96 PHE n 3 97 THR n 3 98 GLY n 3 99 CYS n 3 100 VAL n 3 101 ILE n 3 102 ALA n 3 103 TRP n 3 104 ASN n 3 105 SER n 3 106 ASN n 3 107 ASN n 3 108 LEU n 3 109 ASP n 3 110 SER n 3 111 LYS n 3 112 VAL n 3 113 GLY n 3 114 GLY n 3 115 ASN n 3 116 TYR n 3 117 ASN n 3 118 TYR n 3 119 ARG n 3 120 TYR n 3 121 ARG n 3 122 LEU n 3 123 PHE n 3 124 ARG n 3 125 LYS n 3 126 SER n 3 127 ASN n 3 128 LEU n 3 129 LYS n 3 130 PRO n 3 131 PHE n 3 132 GLU n 3 133 ARG n 3 134 ASP n 3 135 ILE n 3 136 SER n 3 137 THR n 3 138 GLU n 3 139 ILE n 3 140 TYR n 3 141 GLN n 3 142 ALA n 3 143 GLY n 3 144 SER n 3 145 LYS n 3 146 PRO n 3 147 CYS n 3 148 ASN n 3 149 GLY n 3 150 VAL n 3 151 GLU n 3 152 GLY n 3 153 PHE n 3 154 ASN n 3 155 CYS n 3 156 TYR n 3 157 PHE n 3 158 PRO n 3 159 LEU n 3 160 GLN n 3 161 SER n 3 162 TYR n 3 163 GLY n 3 164 PHE n 3 165 GLN n 3 166 PRO n 3 167 THR n 3 168 ASN n 3 169 GLY n 3 170 VAL n 3 171 GLY n 3 172 TYR n 3 173 GLN n 3 174 PRO n 3 175 TYR n 3 176 ARG n 3 177 VAL n 3 178 VAL n 3 179 VAL n 3 180 LEU n 3 181 SER n 3 182 PHE n 3 183 GLU n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 118 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 111 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 183 2019-nCoV,SARS-CoV-2 ? 'S, 2' ? ? ? ? ? ? 'Severe acute respiratory syndrome coronavirus' 2901879 delta ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 7WRO 7WRO ? 1 ? 1 2 PDB 7WRO 7WRO ? 2 ? 1 3 UNP SPIKE_SARS2 P0DTC2 ? 3 ;NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQ SYGFQPTNGVGYQPYRVVVLSFE ; 334 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7WRO H 1 ? 118 ? 7WRO 20 ? 137 ? 20 137 2 2 7WRO L 1 ? 111 ? 7WRO 21 ? 131 ? 21 131 3 3 7WRO R 1 ? 183 ? P0DTC2 334 ? 516 ? 334 516 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 3 7WRO ARG R 119 ? UNP P0DTC2 LEU 452 variant 452 1 3 7WRO LYS R 145 ? UNP P0DTC2 THR 478 variant 478 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7WRO _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7WRO _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high . _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.008 ? 3256 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 1.071 ? 4420 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 24.795 ? 456 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.067 ? 470 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.008 ? 579 ? f_plane_restr ? ? # _struct.entry_id 7WRO _struct.title 'Local structure of BD55-3372 and delta spike' _struct.pdbx_structure_determination_methodology ? _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7WRO _struct_keywords.text 'complex, sars-cov-2, VIRAL PROTEIN, VIRAL PROTEIN-IMMUNE SYSTEM complex' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN/IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 62 ? LYS A 65 ? ASP H 81 LYS H 84 5 ? 4 HELX_P HELX_P2 AA2 ARG A 87 ? THR A 91 ? ARG H 106 THR H 110 5 ? 5 HELX_P HELX_P3 AA3 TYR C 32 ? ASN C 37 ? TYR R 365 ASN R 370 1 ? 6 HELX_P HELX_P4 AA4 SER C 50 ? LEU C 57 ? SER R 383 LEU R 390 5 ? 8 HELX_P HELX_P5 AA5 GLY C 71 ? ARG C 75 ? GLY R 404 ARG R 408 5 ? 5 HELX_P HELX_P6 AA6 LYS C 84 ? ASN C 89 ? LYS R 417 ASN R 422 1 ? 6 HELX_P HELX_P7 AA7 SER C 105 ? SER C 110 ? SER R 438 SER R 443 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 96 SG ? ? H CYS 41 H CYS 115 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf2 disulf ? ? B CYS 21 SG ? ? ? 1_555 B CYS 89 SG ? ? L CYS 41 L CYS 109 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf3 disulf ? ? C CYS 3 SG ? ? ? 1_555 C CYS 28 SG ? ? R CYS 336 R CYS 361 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf4 disulf ? ? C CYS 46 SG ? ? ? 1_555 C CYS 99 SG ? ? R CYS 379 R CYS 432 1_555 ? ? ? ? ? ? ? 2.049 ? ? disulf5 disulf ? ? C CYS 147 SG ? ? ? 1_555 C CYS 155 SG ? ? R CYS 480 R CYS 488 1_555 ? ? ? ? ? ? ? 2.034 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 5 ? AA3 ? 2 ? AA4 ? 4 ? AA5 ? 2 ? AA6 ? 2 ? AA7 ? 3 ? AA8 ? 2 ? AA9 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel AA6 1 2 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA8 1 2 ? anti-parallel AA9 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 HIS A 3 ? SER A 7 ? HIS H 22 SER H 26 AA1 2 SER A 17 ? SER A 25 ? SER H 36 SER H 44 AA1 3 SER A 78 ? ASN A 84 ? SER H 97 ASN H 103 AA1 4 THR A 69 ? ASP A 73 ? THR H 88 ASP H 92 AA2 1 ILE A 58 ? TYR A 60 ? ILE H 77 TYR H 79 AA2 2 LEU A 45 ? ILE A 51 ? LEU H 64 ILE H 70 AA2 3 MET A 34 ? GLN A 39 ? MET H 53 GLN H 58 AA2 4 ALA A 92 ? ARG A 98 ? ALA H 111 ARG H 117 AA2 5 THR A 113 ? VAL A 115 ? THR H 132 VAL H 134 AA3 1 THR B 16 ? VAL B 17 ? THR L 36 VAL L 37 AA3 2 ILE B 76 ? THR B 77 ? ILE L 96 THR L 97 AA4 1 LYS B 46 ? ARG B 47 ? LYS L 66 ARG L 67 AA4 2 TYR B 37 ? GLN B 39 ? TYR L 57 GLN L 59 AA4 3 ALA B 85 ? TYR B 88 ? ALA L 105 TYR L 108 AA4 4 THR B 107 ? LEU B 109 ? THR L 127 LEU L 129 AA5 1 SER B 66 ? SER B 68 ? SER L 86 SER L 88 AA5 2 SER B 71 ? SER B 73 ? SER L 91 SER L 93 AA6 1 GLN B 90 ? ASP B 93 ? GLN L 110 ASP L 113 AA6 2 ALA B 100 ? PHE B 103 ? ALA L 120 PHE L 123 AA7 1 TYR C 63 ? ILE C 69 ? TYR R 396 ILE R 402 AA7 2 TYR C 175 ? SER C 181 ? TYR R 508 SER R 514 AA7 3 VAL C 100 ? ASN C 104 ? VAL R 433 ASN R 437 AA8 1 ARG C 119 ? ARG C 121 ? ARG R 452 ARG R 454 AA8 2 LEU C 159 ? SER C 161 ? LEU R 492 SER R 494 AA9 1 TYR C 140 ? GLN C 141 ? TYR R 473 GLN R 474 AA9 2 CYS C 155 ? TYR C 156 ? CYS R 488 TYR R 489 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 5 ? N VAL H 24 O ALA A 23 ? O ALA H 42 AA1 2 3 N LEU A 18 ? N LEU H 37 O MET A 83 ? O MET H 102 AA1 3 4 O TYR A 80 ? O TYR H 99 N VAL A 71 ? N VAL H 90 AA2 1 2 O PHE A 59 ? O PHE H 78 N SER A 50 ? N SER H 69 AA2 2 3 O ILE A 51 ? O ILE H 70 N MET A 34 ? N MET H 53 AA2 3 4 N ASN A 35 ? N ASN H 54 O ALA A 97 ? O ALA H 116 AA2 4 5 N ALA A 92 ? N ALA H 111 O VAL A 115 ? O VAL H 134 AA3 1 2 N VAL B 17 ? N VAL L 37 O ILE B 76 ? O ILE L 96 AA4 1 2 O LYS B 46 ? O LYS L 66 N GLN B 38 ? N GLN L 58 AA4 2 3 N GLN B 39 ? N GLN L 59 O ASP B 86 ? O ASP L 106 AA4 3 4 N TYR B 87 ? N TYR L 107 O THR B 107 ? O THR L 127 AA5 1 2 N SER B 68 ? N SER L 88 O SER B 71 ? O SER L 91 AA6 1 2 N ASP B 93 ? N ASP L 113 O ALA B 100 ? O ALA L 120 AA7 1 2 N ILE C 69 ? N ILE R 402 O TYR C 175 ? O TYR R 508 AA7 2 3 O ARG C 176 ? O ARG R 509 N TRP C 103 ? N TRP R 436 AA8 1 2 N TYR C 120 ? N TYR R 453 O GLN C 160 ? O GLN R 493 AA9 1 2 N TYR C 140 ? N TYR R 473 O TYR C 156 ? O TYR R 489 # _atom_sites.entry_id 7WRO _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 20 20 GLU GLU H . n A 1 2 VAL 2 21 21 VAL VAL H . n A 1 3 HIS 3 22 22 HIS HIS H . n A 1 4 LEU 4 23 23 LEU LEU H . n A 1 5 VAL 5 24 24 VAL VAL H . n A 1 6 GLU 6 25 25 GLU GLU H . n A 1 7 SER 7 26 26 SER SER H . n A 1 8 GLY 8 27 27 GLY GLY H . n A 1 9 GLY 9 28 28 GLY GLY H . n A 1 10 GLY 10 29 29 GLY GLY H . n A 1 11 LEU 11 30 30 LEU LEU H . n A 1 12 VAL 12 31 31 VAL VAL H . n A 1 13 LYS 13 32 32 LYS LYS H . n A 1 14 PRO 14 33 33 PRO PRO H . n A 1 15 GLY 15 34 34 GLY GLY H . n A 1 16 GLY 16 35 35 GLY GLY H . n A 1 17 SER 17 36 36 SER SER H . n A 1 18 LEU 18 37 37 LEU LEU H . n A 1 19 ARG 19 38 38 ARG ARG H . n A 1 20 LEU 20 39 39 LEU LEU H . n A 1 21 SER 21 40 40 SER SER H . n A 1 22 CYS 22 41 41 CYS CYS H . n A 1 23 ALA 23 42 42 ALA ALA H . n A 1 24 ALA 24 43 43 ALA ALA H . n A 1 25 SER 25 44 44 SER SER H . n A 1 26 GLY 26 45 45 GLY GLY H . n A 1 27 PHE 27 46 46 PHE PHE H . n A 1 28 THR 28 47 47 THR THR H . n A 1 29 PHE 29 48 48 PHE PHE H . n A 1 30 SER 30 49 49 SER SER H . n A 1 31 ASN 31 50 50 ASN ASN H . n A 1 32 TYR 32 51 51 TYR TYR H . n A 1 33 ALA 33 52 52 ALA ALA H . n A 1 34 MET 34 53 53 MET MET H . n A 1 35 ASN 35 54 54 ASN ASN H . n A 1 36 TRP 36 55 55 TRP TRP H . n A 1 37 VAL 37 56 56 VAL VAL H . n A 1 38 ARG 38 57 57 ARG ARG H . n A 1 39 GLN 39 58 58 GLN GLN H . n A 1 40 ALA 40 59 59 ALA ALA H . n A 1 41 PRO 41 60 60 PRO PRO H . n A 1 42 GLY 42 61 61 GLY GLY H . n A 1 43 LYS 43 62 62 LYS LYS H . n A 1 44 GLY 44 63 63 GLY GLY H . n A 1 45 LEU 45 64 64 LEU LEU H . n A 1 46 GLN 46 65 65 GLN GLN H . n A 1 47 TRP 47 66 66 TRP TRP H . n A 1 48 VAL 48 67 67 VAL VAL H . n A 1 49 SER 49 68 68 SER SER H . n A 1 50 SER 50 69 69 SER SER H . n A 1 51 ILE 51 70 70 ILE ILE H . n A 1 52 THR 52 71 71 THR THR H . n A 1 53 GLY 53 72 72 GLY GLY H . n A 1 54 SER 54 73 73 SER SER H . n A 1 55 SER 55 74 74 SER SER H . n A 1 56 SER 56 75 75 SER SER H . n A 1 57 PHE 57 76 76 PHE PHE H . n A 1 58 ILE 58 77 77 ILE ILE H . n A 1 59 PHE 59 78 78 PHE PHE H . n A 1 60 TYR 60 79 79 TYR TYR H . n A 1 61 ALA 61 80 80 ALA ALA H . n A 1 62 ASP 62 81 81 ASP ASP H . n A 1 63 SER 63 82 82 SER SER H . n A 1 64 VAL 64 83 83 VAL VAL H . n A 1 65 LYS 65 84 84 LYS LYS H . n A 1 66 GLY 66 85 85 GLY GLY H . n A 1 67 ARG 67 86 86 ARG ARG H . n A 1 68 PHE 68 87 87 PHE PHE H . n A 1 69 THR 69 88 88 THR THR H . n A 1 70 ILE 70 89 89 ILE ILE H . n A 1 71 VAL 71 90 90 VAL VAL H . n A 1 72 ARG 72 91 91 ARG ARG H . n A 1 73 ASP 73 92 92 ASP ASP H . n A 1 74 ASN 74 93 93 ASN ASN H . n A 1 75 ALA 75 94 94 ALA ALA H . n A 1 76 GLN 76 95 95 GLN GLN H . n A 1 77 ASN 77 96 96 ASN ASN H . n A 1 78 SER 78 97 97 SER SER H . n A 1 79 LEU 79 98 98 LEU LEU H . n A 1 80 TYR 80 99 99 TYR TYR H . n A 1 81 LEU 81 100 100 LEU LEU H . n A 1 82 GLN 82 101 101 GLN GLN H . n A 1 83 MET 83 102 102 MET MET H . n A 1 84 ASN 84 103 103 ASN ASN H . n A 1 85 SER 85 104 104 SER SER H . n A 1 86 LEU 86 105 105 LEU LEU H . n A 1 87 ARG 87 106 106 ARG ARG H . n A 1 88 ASP 88 107 107 ASP ASP H . n A 1 89 GLU 89 108 108 GLU GLU H . n A 1 90 ASP 90 109 109 ASP ASP H . n A 1 91 THR 91 110 110 THR THR H . n A 1 92 ALA 92 111 111 ALA ALA H . n A 1 93 VAL 93 112 112 VAL VAL H . n A 1 94 TYR 94 113 113 TYR TYR H . n A 1 95 TYR 95 114 114 TYR TYR H . n A 1 96 CYS 96 115 115 CYS CYS H . n A 1 97 ALA 97 116 116 ALA ALA H . n A 1 98 ARG 98 117 117 ARG ARG H . n A 1 99 GLU 99 118 118 GLU GLU H . n A 1 100 ARG 100 119 119 ARG ARG H . n A 1 101 ASP 101 120 120 ASP ASP H . n A 1 102 ASP 102 121 121 ASP ASP H . n A 1 103 TYR 103 122 122 TYR TYR H . n A 1 104 ASP 104 123 123 ASP ASP H . n A 1 105 THR 105 124 124 THR THR H . n A 1 106 ARG 106 125 125 ARG ARG H . n A 1 107 LEU 107 126 126 LEU LEU H . n A 1 108 ASP 108 127 127 ASP ASP H . n A 1 109 TRP 109 128 128 TRP TRP H . n A 1 110 GLY 110 129 129 GLY GLY H . n A 1 111 GLN 111 130 130 GLN GLN H . n A 1 112 GLY 112 131 131 GLY GLY H . n A 1 113 THR 113 132 132 THR THR H . n A 1 114 LEU 114 133 133 LEU LEU H . n A 1 115 VAL 115 134 134 VAL VAL H . n A 1 116 THR 116 135 135 THR THR H . n A 1 117 VAL 117 136 136 VAL VAL H . n A 1 118 SER 118 137 137 SER SER H . n B 2 1 PRO 1 21 21 PRO PRO L . n B 2 2 MET 2 22 22 MET MET L . n B 2 3 LEU 3 23 23 LEU LEU L . n B 2 4 THR 4 24 24 THR THR L . n B 2 5 GLN 5 25 25 GLN GLN L . n B 2 6 PRO 6 26 26 PRO PRO L . n B 2 7 PRO 7 27 27 PRO PRO L . n B 2 8 SER 8 28 28 SER SER L . n B 2 9 VAL 9 29 29 VAL VAL L . n B 2 10 SER 10 30 30 SER SER L . n B 2 11 GLY 11 31 31 GLY GLY L . n B 2 12 ALA 12 32 32 ALA ALA L . n B 2 13 PRO 13 33 33 PRO PRO L . n B 2 14 GLY 14 34 34 GLY GLY L . n B 2 15 GLN 15 35 35 GLN GLN L . n B 2 16 THR 16 36 36 THR THR L . n B 2 17 VAL 17 37 37 VAL VAL L . n B 2 18 THR 18 38 38 THR THR L . n B 2 19 ILE 19 39 39 ILE ILE L . n B 2 20 SER 20 40 40 SER SER L . n B 2 21 CYS 21 41 41 CYS CYS L . n B 2 22 VAL 22 42 42 VAL VAL L . n B 2 23 GLY 23 43 43 GLY GLY L . n B 2 24 SER 24 44 44 SER SER L . n B 2 25 SER 25 45 45 SER SER L . n B 2 26 SER 26 46 46 SER SER L . n B 2 27 ASN 27 47 47 ASN ASN L . n B 2 28 ILE 28 48 48 ILE ILE L . n B 2 29 GLY 29 49 49 GLY GLY L . n B 2 30 ALA 30 50 50 ALA ALA L . n B 2 31 GLY 31 51 51 GLY GLY L . n B 2 32 TYR 32 52 52 TYR TYR L . n B 2 33 GLU 33 53 53 GLU GLU L . n B 2 34 VAL 34 54 54 VAL VAL L . n B 2 35 HIS 35 55 55 HIS HIS L . n B 2 36 TRP 36 56 56 TRP TRP L . n B 2 37 TYR 37 57 57 TYR TYR L . n B 2 38 GLN 38 58 58 GLN GLN L . n B 2 39 GLN 39 59 59 GLN GLN L . n B 2 40 LEU 40 60 60 LEU LEU L . n B 2 41 PRO 41 61 61 PRO PRO L . n B 2 42 GLY 42 62 62 GLY GLY L . n B 2 43 THR 43 63 63 THR THR L . n B 2 44 ALA 44 64 64 ALA ALA L . n B 2 45 PRO 45 65 65 PRO PRO L . n B 2 46 LYS 46 66 66 LYS LYS L . n B 2 47 ARG 47 67 67 ARG ARG L . n B 2 48 LEU 48 68 68 LEU LEU L . n B 2 49 LEU 49 69 69 LEU LEU L . n B 2 50 SER 50 70 70 SER SER L . n B 2 51 GLY 51 71 71 GLY GLY L . n B 2 52 ASN 52 72 72 ASN ASN L . n B 2 53 SER 53 73 73 SER SER L . n B 2 54 ASP 54 74 74 ASP ASP L . n B 2 55 ARG 55 75 75 ARG ARG L . n B 2 56 PRO 56 76 76 PRO PRO L . n B 2 57 SER 57 77 77 SER SER L . n B 2 58 GLY 58 78 78 GLY GLY L . n B 2 59 VAL 59 79 79 VAL VAL L . n B 2 60 PRO 60 80 80 PRO PRO L . n B 2 61 ASP 61 81 81 ASP ASP L . n B 2 62 ARG 62 82 82 ARG ARG L . n B 2 63 PHE 63 83 83 PHE PHE L . n B 2 64 SER 64 84 84 SER SER L . n B 2 65 GLY 65 85 85 GLY GLY L . n B 2 66 SER 66 86 86 SER SER L . n B 2 67 LYS 67 87 87 LYS LYS L . n B 2 68 SER 68 88 88 SER SER L . n B 2 69 GLY 69 89 89 GLY GLY L . n B 2 70 THR 70 90 90 THR THR L . n B 2 71 SER 71 91 91 SER SER L . n B 2 72 ALA 72 92 92 ALA ALA L . n B 2 73 SER 73 93 93 SER SER L . n B 2 74 LEU 74 94 94 LEU LEU L . n B 2 75 ALA 75 95 95 ALA ALA L . n B 2 76 ILE 76 96 96 ILE ILE L . n B 2 77 THR 77 97 97 THR THR L . n B 2 78 GLY 78 98 98 GLY GLY L . n B 2 79 LEU 79 99 99 LEU LEU L . n B 2 80 GLN 80 100 100 GLN GLN L . n B 2 81 ALA 81 101 101 ALA ALA L . n B 2 82 ASP 82 102 102 ASP ASP L . n B 2 83 ASP 83 103 103 ASP ASP L . n B 2 84 GLU 84 104 104 GLU GLU L . n B 2 85 ALA 85 105 105 ALA ALA L . n B 2 86 ASP 86 106 106 ASP ASP L . n B 2 87 TYR 87 107 107 TYR TYR L . n B 2 88 TYR 88 108 108 TYR TYR L . n B 2 89 CYS 89 109 109 CYS CYS L . n B 2 90 GLN 90 110 110 GLN GLN L . n B 2 91 SER 91 111 111 SER SER L . n B 2 92 TYR 92 112 112 TYR TYR L . n B 2 93 ASP 93 113 113 ASP ASP L . n B 2 94 SER 94 114 114 SER SER L . n B 2 95 SER 95 115 115 SER SER L . n B 2 96 LEU 96 116 116 LEU LEU L . n B 2 97 SER 97 117 117 SER SER L . n B 2 98 LEU 98 118 118 LEU LEU L . n B 2 99 SER 99 119 119 SER SER L . n B 2 100 ALA 100 120 120 ALA ALA L . n B 2 101 VAL 101 121 121 VAL VAL L . n B 2 102 VAL 102 122 122 VAL VAL L . n B 2 103 PHE 103 123 123 PHE PHE L . n B 2 104 GLY 104 124 124 GLY GLY L . n B 2 105 GLY 105 125 125 GLY GLY L . n B 2 106 GLY 106 126 126 GLY GLY L . n B 2 107 THR 107 127 127 THR THR L . n B 2 108 LYS 108 128 128 LYS LYS L . n B 2 109 LEU 109 129 129 LEU LEU L . n B 2 110 THR 110 130 130 THR THR L . n B 2 111 VAL 111 131 131 VAL VAL L . n C 3 1 ASN 1 334 334 ASN ASN R . n C 3 2 LEU 2 335 335 LEU LEU R . n C 3 3 CYS 3 336 336 CYS CYS R . n C 3 4 PRO 4 337 337 PRO PRO R . n C 3 5 PHE 5 338 338 PHE PHE R . n C 3 6 GLY 6 339 339 GLY GLY R . n C 3 7 GLU 7 340 340 GLU GLU R . n C 3 8 VAL 8 341 341 VAL VAL R . n C 3 9 PHE 9 342 342 PHE PHE R . n C 3 10 ASN 10 343 343 ASN ASN R . n C 3 11 ALA 11 344 344 ALA ALA R . n C 3 12 THR 12 345 345 THR THR R . n C 3 13 ARG 13 346 346 ARG ARG R . n C 3 14 PHE 14 347 347 PHE PHE R . n C 3 15 ALA 15 348 348 ALA ALA R . n C 3 16 SER 16 349 349 SER SER R . n C 3 17 VAL 17 350 350 VAL VAL R . n C 3 18 TYR 18 351 351 TYR TYR R . n C 3 19 ALA 19 352 352 ALA ALA R . n C 3 20 TRP 20 353 353 TRP TRP R . n C 3 21 ASN 21 354 354 ASN ASN R . n C 3 22 ARG 22 355 355 ARG ARG R . n C 3 23 LYS 23 356 356 LYS LYS R . n C 3 24 ARG 24 357 357 ARG ARG R . n C 3 25 ILE 25 358 358 ILE ILE R . n C 3 26 SER 26 359 359 SER SER R . n C 3 27 ASN 27 360 360 ASN ASN R . n C 3 28 CYS 28 361 361 CYS CYS R . n C 3 29 VAL 29 362 362 VAL VAL R . n C 3 30 ALA 30 363 363 ALA ALA R . n C 3 31 ASP 31 364 364 ASP ASP R . n C 3 32 TYR 32 365 365 TYR TYR R . n C 3 33 SER 33 366 366 SER SER R . n C 3 34 VAL 34 367 367 VAL VAL R . n C 3 35 LEU 35 368 368 LEU LEU R . n C 3 36 TYR 36 369 369 TYR TYR R . n C 3 37 ASN 37 370 370 ASN ASN R . n C 3 38 SER 38 371 371 SER SER R . n C 3 39 ALA 39 372 372 ALA ALA R . n C 3 40 SER 40 373 373 SER SER R . n C 3 41 PHE 41 374 374 PHE PHE R . n C 3 42 SER 42 375 375 SER SER R . n C 3 43 THR 43 376 376 THR THR R . n C 3 44 PHE 44 377 377 PHE PHE R . n C 3 45 LYS 45 378 378 LYS LYS R . n C 3 46 CYS 46 379 379 CYS CYS R . n C 3 47 TYR 47 380 380 TYR TYR R . n C 3 48 GLY 48 381 381 GLY GLY R . n C 3 49 VAL 49 382 382 VAL VAL R . n C 3 50 SER 50 383 383 SER SER R . n C 3 51 PRO 51 384 384 PRO PRO R . n C 3 52 THR 52 385 385 THR THR R . n C 3 53 LYS 53 386 386 LYS LYS R . n C 3 54 LEU 54 387 387 LEU LEU R . n C 3 55 ASN 55 388 388 ASN ASN R . n C 3 56 ASP 56 389 389 ASP ASP R . n C 3 57 LEU 57 390 390 LEU LEU R . n C 3 58 CYS 58 391 391 CYS CYS R . n C 3 59 PHE 59 392 392 PHE PHE R . n C 3 60 THR 60 393 393 THR THR R . n C 3 61 ASN 61 394 394 ASN ASN R . n C 3 62 VAL 62 395 395 VAL VAL R . n C 3 63 TYR 63 396 396 TYR TYR R . n C 3 64 ALA 64 397 397 ALA ALA R . n C 3 65 ASP 65 398 398 ASP ASP R . n C 3 66 SER 66 399 399 SER SER R . n C 3 67 PHE 67 400 400 PHE PHE R . n C 3 68 VAL 68 401 401 VAL VAL R . n C 3 69 ILE 69 402 402 ILE ILE R . n C 3 70 ARG 70 403 403 ARG ARG R . n C 3 71 GLY 71 404 404 GLY GLY R . n C 3 72 ASP 72 405 405 ASP ASP R . n C 3 73 GLU 73 406 406 GLU GLU R . n C 3 74 VAL 74 407 407 VAL VAL R . n C 3 75 ARG 75 408 408 ARG ARG R . n C 3 76 GLN 76 409 409 GLN GLN R . n C 3 77 ILE 77 410 410 ILE ILE R . n C 3 78 ALA 78 411 411 ALA ALA R . n C 3 79 PRO 79 412 412 PRO PRO R . n C 3 80 GLY 80 413 413 GLY GLY R . n C 3 81 GLN 81 414 414 GLN GLN R . n C 3 82 THR 82 415 415 THR THR R . n C 3 83 GLY 83 416 416 GLY GLY R . n C 3 84 LYS 84 417 417 LYS LYS R . n C 3 85 ILE 85 418 418 ILE ILE R . n C 3 86 ALA 86 419 419 ALA ALA R . n C 3 87 ASP 87 420 420 ASP ASP R . n C 3 88 TYR 88 421 421 TYR TYR R . n C 3 89 ASN 89 422 422 ASN ASN R . n C 3 90 TYR 90 423 423 TYR TYR R . n C 3 91 LYS 91 424 424 LYS LYS R . n C 3 92 LEU 92 425 425 LEU LEU R . n C 3 93 PRO 93 426 426 PRO PRO R . n C 3 94 ASP 94 427 427 ASP ASP R . n C 3 95 ASP 95 428 428 ASP ASP R . n C 3 96 PHE 96 429 429 PHE PHE R . n C 3 97 THR 97 430 430 THR THR R . n C 3 98 GLY 98 431 431 GLY GLY R . n C 3 99 CYS 99 432 432 CYS CYS R . n C 3 100 VAL 100 433 433 VAL VAL R . n C 3 101 ILE 101 434 434 ILE ILE R . n C 3 102 ALA 102 435 435 ALA ALA R . n C 3 103 TRP 103 436 436 TRP TRP R . n C 3 104 ASN 104 437 437 ASN ASN R . n C 3 105 SER 105 438 438 SER SER R . n C 3 106 ASN 106 439 439 ASN ASN R . n C 3 107 ASN 107 440 440 ASN ASN R . n C 3 108 LEU 108 441 441 LEU LEU R . n C 3 109 ASP 109 442 442 ASP ASP R . n C 3 110 SER 110 443 443 SER SER R . n C 3 111 LYS 111 444 444 LYS LYS R . n C 3 112 VAL 112 445 445 VAL VAL R . n C 3 113 GLY 113 446 446 GLY GLY R . n C 3 114 GLY 114 447 447 GLY GLY R . n C 3 115 ASN 115 448 448 ASN ASN R . n C 3 116 TYR 116 449 449 TYR TYR R . n C 3 117 ASN 117 450 450 ASN ASN R . n C 3 118 TYR 118 451 451 TYR TYR R . n C 3 119 ARG 119 452 452 ARG ARG R . n C 3 120 TYR 120 453 453 TYR TYR R . n C 3 121 ARG 121 454 454 ARG ARG R . n C 3 122 LEU 122 455 455 LEU LEU R . n C 3 123 PHE 123 456 456 PHE PHE R . n C 3 124 ARG 124 457 457 ARG ARG R . n C 3 125 LYS 125 458 458 LYS LYS R . n C 3 126 SER 126 459 459 SER SER R . n C 3 127 ASN 127 460 460 ASN ASN R . n C 3 128 LEU 128 461 461 LEU LEU R . n C 3 129 LYS 129 462 462 LYS LYS R . n C 3 130 PRO 130 463 463 PRO PRO R . n C 3 131 PHE 131 464 464 PHE PHE R . n C 3 132 GLU 132 465 465 GLU GLU R . n C 3 133 ARG 133 466 466 ARG ARG R . n C 3 134 ASP 134 467 467 ASP ASP R . n C 3 135 ILE 135 468 468 ILE ILE R . n C 3 136 SER 136 469 469 SER SER R . n C 3 137 THR 137 470 470 THR THR R . n C 3 138 GLU 138 471 471 GLU GLU R . n C 3 139 ILE 139 472 472 ILE ILE R . n C 3 140 TYR 140 473 473 TYR TYR R . n C 3 141 GLN 141 474 474 GLN GLN R . n C 3 142 ALA 142 475 475 ALA ALA R . n C 3 143 GLY 143 476 476 GLY GLY R . n C 3 144 SER 144 477 477 SER SER R . n C 3 145 LYS 145 478 478 LYS LYS R . n C 3 146 PRO 146 479 479 PRO PRO R . n C 3 147 CYS 147 480 480 CYS CYS R . n C 3 148 ASN 148 481 481 ASN ASN R . n C 3 149 GLY 149 482 482 GLY GLY R . n C 3 150 VAL 150 483 483 VAL VAL R . n C 3 151 GLU 151 484 484 GLU GLU R . n C 3 152 GLY 152 485 485 GLY GLY R . n C 3 153 PHE 153 486 486 PHE PHE R . n C 3 154 ASN 154 487 487 ASN ASN R . n C 3 155 CYS 155 488 488 CYS CYS R . n C 3 156 TYR 156 489 489 TYR TYR R . n C 3 157 PHE 157 490 490 PHE PHE R . n C 3 158 PRO 158 491 491 PRO PRO R . n C 3 159 LEU 159 492 492 LEU LEU R . n C 3 160 GLN 160 493 493 GLN GLN R . n C 3 161 SER 161 494 494 SER SER R . n C 3 162 TYR 162 495 495 TYR TYR R . n C 3 163 GLY 163 496 496 GLY GLY R . n C 3 164 PHE 164 497 497 PHE PHE R . n C 3 165 GLN 165 498 498 GLN GLN R . n C 3 166 PRO 166 499 499 PRO PRO R . n C 3 167 THR 167 500 500 THR THR R . n C 3 168 ASN 168 501 501 ASN ASN R . n C 3 169 GLY 169 502 502 GLY GLY R . n C 3 170 VAL 170 503 503 VAL VAL R . n C 3 171 GLY 171 504 504 GLY GLY R . n C 3 172 TYR 172 505 505 TYR TYR R . n C 3 173 GLN 173 506 506 GLN GLN R . n C 3 174 PRO 174 507 507 PRO PRO R . n C 3 175 TYR 175 508 508 TYR TYR R . n C 3 176 ARG 176 509 509 ARG ARG R . n C 3 177 VAL 177 510 510 VAL VAL R . n C 3 178 VAL 178 511 511 VAL VAL R . n C 3 179 VAL 179 512 512 VAL VAL R . n C 3 180 LEU 180 513 513 LEU LEU R . n C 3 181 SER 181 514 514 SER SER R . n C 3 182 PHE 182 515 515 PHE PHE R . n C 3 183 GLU 183 516 516 GLU GLU R . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email liupulan1995@163.com _pdbx_contact_author.name_first Pulan _pdbx_contact_author.name_last Liu _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-0046-6997 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-06-22 2 'Structure model' 1 1 2022-07-13 3 'Structure model' 1 2 2022-08-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 3 'Structure model' '_citation.journal_volume' 11 3 'Structure model' '_citation.page_first' 12 3 'Structure model' '_citation.page_last' 13 3 'Structure model' '_citation_author.identifier_ORCID' # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name PHENIX _software.os ? _software.os_version ? _software.type ? _software.version 1.18.2_3874: _software.pdbx_ordinal 1 # _em_3d_fitting.entry_id 7WRO _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol ? _em_3d_fitting.ref_space ? _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 7WRO _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 343297 _em_3d_reconstruction.resolution 3.4 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 7.2 _em_buffer.specimen_id 1 _em_buffer.name ? # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.details _em_entity_assembly.name _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.entity_id_list _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details 1 0 ? 'local structure of BD55-3372 and delta RBD' RECOMBINANT COMPLEX '1, 2, 3' ? ? 2 1 ? BD55-3372 RECOMBINANT COMPLEX '1, 2' ? ? 3 1 ? 'delta RBD' RECOMBINANT COMPLEX 3 ? ? # _em_imaging.id 1 _em_imaging.entry_id 7WRO _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen ? _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max 5000 _em_imaging.nominal_defocus_min 1200 _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature ? _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity ? _em_vitrification.instrument ? _em_vitrification.entry_id 7WRO _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 7WRO _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE H ARG 57 ? ? CZ H ARG 57 ? ? NH1 H ARG 57 ? ? 123.34 120.30 3.04 0.50 N 2 1 CA R LEU 368 ? ? CB R LEU 368 ? ? CG R LEU 368 ? ? 129.56 115.30 14.26 2.30 N 3 1 CA R CYS 379 ? ? CB R CYS 379 ? ? SG R CYS 379 ? ? 125.41 114.20 11.21 1.10 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP H 123 ? ? 52.59 16.45 2 1 SER L 70 ? ? -140.08 -151.04 3 1 SER L 73 ? ? -142.46 28.35 4 1 ASP L 103 ? ? -95.29 55.91 5 1 SER L 111 ? ? -152.25 -158.96 6 1 GLU R 406 ? ? -85.25 45.24 7 1 PHE R 515 ? ? -119.30 -166.38 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 GLY _pdbx_validate_peptide_omega.auth_asym_id_1 L _pdbx_validate_peptide_omega.auth_seq_id_1 71 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 ASN _pdbx_validate_peptide_omega.auth_asym_id_2 L _pdbx_validate_peptide_omega.auth_seq_id_2 72 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -148.67 # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # loop_ _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue 1 2 ? ? 9606 ? ? 'Homo sapiens' ? ? 2 3 ? ? 2901879 ? ? 'Severe acute respiratory syndrome coronavirus' ? ? # loop_ _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain 1 2 ? 9606 'Homo sapiens' ? ? 2 3 ? 9606 'Homo sapiens' ? ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 58 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? _em_image_recording.avg_electron_dose_per_subtomogram ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'CRYSTALLOGRAPHY MERGING' ? ? ? 1 1 1 2 'IMAGE ACQUISITION' ? ? ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? ? ? 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? ? ? ? ? ? 8 'MODEL REFINEMENT' ? ? ? ? ? ? 9 OTHER ? ? ? ? ? ? 10 'INITIAL EULER ASSIGNMENT' ? ? ? 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? ? ? 1 ? ? 12 CLASSIFICATION ? ? ? 1 ? ? 13 RECONSTRUCTION ? ? ? 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'National Science Foundation (NSF, China)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #