data_7WS7 # _entry.id 7WS7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.358 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7WS7 pdb_00007ws7 10.2210/pdb7ws7/pdb WWPDB D_1300027347 ? ? EMDB EMD-32749 ? ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Structures of Omicron Spike complexes illuminate broad-spectrum neutralizing antibody development' _pdbx_database_related.db_id EMD-32749 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7WS7 _pdbx_database_status.recvd_initial_deposition_date 2022-01-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Guo, H.' 1 0000-0001-5213-9600 'Gao, Y.' 2 0000-0002-0364-6427 'Ji, X.' 3 0000-0002-0801-8825 'Yang, H.' 4 0000-0002-1875-3268 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Cell Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2211-1247 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 39 _citation.language ? _citation.page_first 110770 _citation.page_last 110770 _citation.title 'Structures of Omicron spike complexes and implications for neutralizing antibody development.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.celrep.2022.110770 _citation.pdbx_database_id_PubMed 35477022 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Guo, H.' 1 ? primary 'Gao, Y.' 2 ? primary 'Li, T.' 3 ? primary 'Li, T.' 4 ? primary 'Lu, Y.' 5 ? primary 'Zheng, L.' 6 ? primary 'Liu, Y.' 7 ? primary 'Yang, T.' 8 ? primary 'Luo, F.' 9 ? primary 'Song, S.' 10 ? primary 'Wang, W.' 11 ? primary 'Yang, X.' 12 ? primary 'Nguyen, H.C.' 13 ? primary 'Zhang, H.' 14 ? primary 'Huang, A.' 15 ? primary 'Jin, A.' 16 ? primary 'Yang, H.' 17 ? primary 'Rao, Z.' 18 ? primary 'Ji, X.' 19 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7WS7 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WS7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Spike protein S1' 23059.967 1 ? ? RBD ? 2 polymer man '510A5 light chain' 11680.938 2 ? ? ? ? 3 polymer man '510A5 heavy chain' 13744.181 2 ? ? ? ? 4 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'S glycoprotein,E2,Peplomer protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;IVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGD EVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEG FNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKS ; ;IVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGD EVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEG FNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKS ; B ? 2 'polypeptide(L)' no no ;DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQP EDFATYYCQQSYSTPPYTFGQGTKLEIK ; ;DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQP EDFATYYCQQSYSTPPYTFGQGTKLEIK ; F,J ? 3 'polypeptide(L)' no no ;EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLY LQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSSAS ; ;EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLY LQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSSAS ; G,K ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 VAL n 1 3 ARG n 1 4 PHE n 1 5 PRO n 1 6 ASN n 1 7 ILE n 1 8 THR n 1 9 ASN n 1 10 LEU n 1 11 CYS n 1 12 PRO n 1 13 PHE n 1 14 GLY n 1 15 GLU n 1 16 VAL n 1 17 PHE n 1 18 ASN n 1 19 ALA n 1 20 THR n 1 21 ARG n 1 22 PHE n 1 23 ALA n 1 24 SER n 1 25 VAL n 1 26 TYR n 1 27 ALA n 1 28 TRP n 1 29 ASN n 1 30 ARG n 1 31 LYS n 1 32 ARG n 1 33 ILE n 1 34 SER n 1 35 ASN n 1 36 CYS n 1 37 VAL n 1 38 ALA n 1 39 ASP n 1 40 TYR n 1 41 SER n 1 42 VAL n 1 43 LEU n 1 44 TYR n 1 45 ASN n 1 46 SER n 1 47 ALA n 1 48 SER n 1 49 PHE n 1 50 SER n 1 51 THR n 1 52 PHE n 1 53 LYS n 1 54 CYS n 1 55 TYR n 1 56 GLY n 1 57 VAL n 1 58 SER n 1 59 PRO n 1 60 THR n 1 61 LYS n 1 62 LEU n 1 63 ASN n 1 64 ASP n 1 65 LEU n 1 66 CYS n 1 67 PHE n 1 68 THR n 1 69 ASN n 1 70 VAL n 1 71 TYR n 1 72 ALA n 1 73 ASP n 1 74 SER n 1 75 PHE n 1 76 VAL n 1 77 ILE n 1 78 ARG n 1 79 GLY n 1 80 ASP n 1 81 GLU n 1 82 VAL n 1 83 ARG n 1 84 GLN n 1 85 ILE n 1 86 ALA n 1 87 PRO n 1 88 GLY n 1 89 GLN n 1 90 THR n 1 91 GLY n 1 92 LYS n 1 93 ILE n 1 94 ALA n 1 95 ASP n 1 96 TYR n 1 97 ASN n 1 98 TYR n 1 99 LYS n 1 100 LEU n 1 101 PRO n 1 102 ASP n 1 103 ASP n 1 104 PHE n 1 105 THR n 1 106 GLY n 1 107 CYS n 1 108 VAL n 1 109 ILE n 1 110 ALA n 1 111 TRP n 1 112 ASN n 1 113 SER n 1 114 ASN n 1 115 ASN n 1 116 LEU n 1 117 ASP n 1 118 SER n 1 119 LYS n 1 120 VAL n 1 121 GLY n 1 122 GLY n 1 123 ASN n 1 124 TYR n 1 125 ASN n 1 126 TYR n 1 127 LEU n 1 128 TYR n 1 129 ARG n 1 130 LEU n 1 131 PHE n 1 132 ARG n 1 133 LYS n 1 134 SER n 1 135 ASN n 1 136 LEU n 1 137 LYS n 1 138 PRO n 1 139 PHE n 1 140 GLU n 1 141 ARG n 1 142 ASP n 1 143 ILE n 1 144 SER n 1 145 THR n 1 146 GLU n 1 147 ILE n 1 148 TYR n 1 149 GLN n 1 150 ALA n 1 151 GLY n 1 152 SER n 1 153 THR n 1 154 PRO n 1 155 CYS n 1 156 ASN n 1 157 GLY n 1 158 VAL n 1 159 GLU n 1 160 GLY n 1 161 PHE n 1 162 ASN n 1 163 CYS n 1 164 TYR n 1 165 PHE n 1 166 PRO n 1 167 LEU n 1 168 GLN n 1 169 SER n 1 170 TYR n 1 171 GLY n 1 172 PHE n 1 173 GLN n 1 174 PRO n 1 175 THR n 1 176 ASN n 1 177 GLY n 1 178 VAL n 1 179 GLY n 1 180 TYR n 1 181 GLN n 1 182 PRO n 1 183 TYR n 1 184 ARG n 1 185 VAL n 1 186 VAL n 1 187 VAL n 1 188 LEU n 1 189 SER n 1 190 PHE n 1 191 GLU n 1 192 LEU n 1 193 LEU n 1 194 HIS n 1 195 ALA n 1 196 PRO n 1 197 ALA n 1 198 THR n 1 199 VAL n 1 200 CYS n 1 201 GLY n 1 202 PRO n 1 203 LYS n 1 204 LYS n 1 205 SER n 2 1 ASP n 2 2 ILE n 2 3 GLN n 2 4 MET n 2 5 THR n 2 6 GLN n 2 7 SER n 2 8 PRO n 2 9 SER n 2 10 SER n 2 11 LEU n 2 12 SER n 2 13 ALA n 2 14 SER n 2 15 VAL n 2 16 GLY n 2 17 ASP n 2 18 ARG n 2 19 VAL n 2 20 THR n 2 21 ILE n 2 22 THR n 2 23 CYS n 2 24 ARG n 2 25 ALA n 2 26 SER n 2 27 GLN n 2 28 SER n 2 29 ILE n 2 30 SER n 2 31 SER n 2 32 TYR n 2 33 LEU n 2 34 ASN n 2 35 TRP n 2 36 PHE n 2 37 GLN n 2 38 HIS n 2 39 LYS n 2 40 PRO n 2 41 GLY n 2 42 LYS n 2 43 ALA n 2 44 PRO n 2 45 LYS n 2 46 LEU n 2 47 LEU n 2 48 ILE n 2 49 TYR n 2 50 GLY n 2 51 ALA n 2 52 SER n 2 53 SER n 2 54 LEU n 2 55 GLN n 2 56 SER n 2 57 GLY n 2 58 VAL n 2 59 PRO n 2 60 SER n 2 61 ARG n 2 62 PHE n 2 63 SER n 2 64 GLY n 2 65 SER n 2 66 GLY n 2 67 SER n 2 68 GLY n 2 69 THR n 2 70 ASP n 2 71 PHE n 2 72 THR n 2 73 LEU n 2 74 THR n 2 75 ILE n 2 76 SER n 2 77 SER n 2 78 LEU n 2 79 GLN n 2 80 PRO n 2 81 GLU n 2 82 ASP n 2 83 PHE n 2 84 ALA n 2 85 THR n 2 86 TYR n 2 87 TYR n 2 88 CYS n 2 89 GLN n 2 90 GLN n 2 91 SER n 2 92 TYR n 2 93 SER n 2 94 THR n 2 95 PRO n 2 96 PRO n 2 97 TYR n 2 98 THR n 2 99 PHE n 2 100 GLY n 2 101 GLN n 2 102 GLY n 2 103 THR n 2 104 LYS n 2 105 LEU n 2 106 GLU n 2 107 ILE n 2 108 LYS n 3 1 GLU n 3 2 VAL n 3 3 GLN n 3 4 LEU n 3 5 VAL n 3 6 GLU n 3 7 SER n 3 8 GLY n 3 9 GLY n 3 10 GLY n 3 11 LEU n 3 12 VAL n 3 13 GLN n 3 14 PRO n 3 15 GLY n 3 16 ARG n 3 17 SER n 3 18 LEU n 3 19 ARG n 3 20 LEU n 3 21 SER n 3 22 CYS n 3 23 ALA n 3 24 ALA n 3 25 SER n 3 26 GLY n 3 27 PHE n 3 28 THR n 3 29 PHE n 3 30 ASP n 3 31 ASP n 3 32 TYR n 3 33 ALA n 3 34 MET n 3 35 HIS n 3 36 TRP n 3 37 VAL n 3 38 ARG n 3 39 GLN n 3 40 ALA n 3 41 PRO n 3 42 GLY n 3 43 LYS n 3 44 GLY n 3 45 LEU n 3 46 GLU n 3 47 TRP n 3 48 VAL n 3 49 SER n 3 50 GLY n 3 51 ILE n 3 52 SER n 3 53 TRP n 3 54 ASN n 3 55 SER n 3 56 ASP n 3 57 SER n 3 58 ILE n 3 59 ASP n 3 60 TYR n 3 61 ALA n 3 62 ASP n 3 63 SER n 3 64 VAL n 3 65 LYS n 3 66 GLY n 3 67 ARG n 3 68 PHE n 3 69 THR n 3 70 ILE n 3 71 SER n 3 72 ARG n 3 73 ASP n 3 74 ASN n 3 75 ALA n 3 76 LYS n 3 77 ASN n 3 78 SER n 3 79 LEU n 3 80 TYR n 3 81 LEU n 3 82 GLN n 3 83 MET n 3 84 ASN n 3 85 SER n 3 86 LEU n 3 87 ARG n 3 88 ALA n 3 89 GLU n 3 90 ASP n 3 91 THR n 3 92 ALA n 3 93 LEU n 3 94 TYR n 3 95 TYR n 3 96 CYS n 3 97 ALA n 3 98 LYS n 3 99 ASP n 3 100 ARG n 3 101 GLY n 3 102 TYR n 3 103 GLU n 3 104 ILE n 3 105 LEU n 3 106 THR n 3 107 PRO n 3 108 ALA n 3 109 SER n 3 110 PHE n 3 111 ASP n 3 112 TYR n 3 113 TRP n 3 114 GLY n 3 115 GLN n 3 116 GLY n 3 117 THR n 3 118 LEU n 3 119 VAL n 3 120 THR n 3 121 VAL n 3 122 SER n 3 123 SER n 3 124 ALA n 3 125 SER n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 205 ? ? 'S, 2' ? ? ? ? ? ? 'Severe acute respiratory syndrome coronavirus 2' 2697049 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 108 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 125 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP SPIKE_SARS2 P0DTC2 ? 1 ;IVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGD EVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEG FNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKS ; 326 2 PDB 7WS7 7WS7 ? 2 ? 1 3 PDB 7WS7 7WS7 ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7WS7 B 1 ? 205 ? P0DTC2 326 ? 530 ? 326 530 2 2 7WS7 F 1 ? 108 ? 7WS7 1 ? 108 ? 1 108 3 3 7WS7 G 1 ? 125 ? 7WS7 1 ? 125 ? 1 125 4 2 7WS7 J 1 ? 108 ? 7WS7 1 ? 108 ? 1 108 5 3 7WS7 K 1 ? 125 ? 7WS7 1 ? 125 ? 1 125 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7WS7 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 7WS7 _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.003 ? 6899 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.553 ? 9378 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 4.650 ? 956 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.044 ? 1005 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.004 ? 1219 ? f_plane_restr ? ? # _struct.entry_id 7WS7 _struct.title 'Structures of Omicron Spike complexes illuminate broad-spectrum neutralizing antibody development' _struct.pdbx_structure_determination_methodology ? _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7WS7 _struct_keywords.text 'COVID-19, spike glycoprotein, virus, VIRAL PROTEIN, antibody, VIRAL PROTEIN-IMMUNE SYSTEM complex' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN/IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 2 ? E N N 3 ? F N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 12 ? ASN A 18 ? PRO B 337 ASN B 343 1 ? 7 HELX_P HELX_P2 AA2 SER A 24 ? TRP A 28 ? SER B 349 TRP B 353 5 ? 5 HELX_P HELX_P3 AA3 TYR A 40 ? SER A 46 ? TYR B 365 SER B 371 1 ? 7 HELX_P HELX_P4 AA4 SER A 58 ? LEU A 62 ? SER B 383 LEU B 387 5 ? 5 HELX_P HELX_P5 AA5 GLU A 81 ? ILE A 85 ? GLU B 406 ILE B 410 5 ? 5 HELX_P HELX_P6 AA6 GLY A 91 ? ASN A 97 ? GLY B 416 ASN B 422 1 ? 7 HELX_P HELX_P7 AA7 GLY A 177 ? GLN A 181 ? GLY B 502 GLN B 506 5 ? 5 HELX_P HELX_P8 AA8 ASP C 62 ? LYS C 65 ? ASP G 62 LYS G 65 5 ? 4 HELX_P HELX_P9 AA9 THR E 28 ? TYR E 32 ? THR K 28 TYR K 32 5 ? 5 HELX_P HELX_P10 AB1 ASP E 62 ? LYS E 65 ? ASP K 62 LYS K 65 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 11 SG ? ? ? 1_555 A CYS 36 SG ? ? B CYS 336 B CYS 361 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf2 disulf ? ? A CYS 54 SG ? ? ? 1_555 A CYS 107 SG ? ? B CYS 379 B CYS 432 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf3 disulf ? ? A CYS 155 SG ? ? ? 1_555 A CYS 163 SG ? ? B CYS 480 B CYS 488 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf4 disulf ? ? B CYS 23 SG ? ? ? 1_555 B CYS 88 SG ? ? F CYS 23 F CYS 88 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf5 disulf ? ? C CYS 22 SG ? ? ? 1_555 C CYS 96 SG ? ? G CYS 22 G CYS 96 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf6 disulf ? ? D CYS 23 SG ? ? ? 1_555 D CYS 88 SG ? ? J CYS 23 J CYS 88 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf7 disulf ? ? E CYS 22 SG ? ? ? 1_555 E CYS 96 SG ? ? K CYS 22 K CYS 96 1_555 ? ? ? ? ? ? ? 2.033 ? ? covale1 covale one ? A ASN 18 ND2 ? ? ? 1_555 F NAG . C1 ? ? B ASN 343 O NAG 1 1_555 ? ? ? ? ? ? ? 1.441 ? N-Glycosylation covale2 covale both ? F NAG . O4 ? ? ? 1_555 F NAG . C1 ? ? O NAG 1 O NAG 2 1_555 ? ? ? ? ? ? ? 1.444 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 2 ? AA3 ? 2 ? AA4 ? 4 ? AA5 ? 2 ? AA6 ? 5 ? AA7 ? 4 ? AA8 ? 2 ? AA9 ? 5 ? AB1 ? 2 ? AB2 ? 4 ? AB3 ? 2 ? AB4 ? 5 ? AB5 ? 4 ? AB6 ? 2 ? AB7 ? 5 ? AB8 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA6 4 5 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel AA8 1 2 ? parallel AA9 1 2 ? anti-parallel AA9 2 3 ? anti-parallel AA9 3 4 ? anti-parallel AA9 4 5 ? anti-parallel AB1 1 2 ? anti-parallel AB2 1 2 ? anti-parallel AB2 2 3 ? anti-parallel AB2 3 4 ? anti-parallel AB3 1 2 ? parallel AB4 1 2 ? anti-parallel AB4 2 3 ? anti-parallel AB4 3 4 ? anti-parallel AB4 4 5 ? anti-parallel AB5 1 2 ? anti-parallel AB5 2 3 ? anti-parallel AB5 3 4 ? anti-parallel AB6 1 2 ? parallel AB7 1 2 ? anti-parallel AB7 2 3 ? anti-parallel AB7 3 4 ? anti-parallel AB7 4 5 ? anti-parallel AB8 1 2 ? anti-parallel AB8 2 3 ? anti-parallel AB8 3 4 ? anti-parallel AB8 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASN A 29 ? ILE A 33 ? ASN B 354 ILE B 358 AA1 2 ASN A 69 ? ILE A 77 ? ASN B 394 ILE B 402 AA1 3 TYR A 183 ? GLU A 191 ? TYR B 508 GLU B 516 AA1 4 GLY A 106 ? ASN A 112 ? GLY B 431 ASN B 437 AA1 5 THR A 51 ? TYR A 55 ? THR B 376 TYR B 380 AA2 1 LEU A 127 ? ARG A 129 ? LEU B 452 ARG B 454 AA2 2 LEU A 167 ? SER A 169 ? LEU B 492 SER B 494 AA3 1 TYR A 148 ? GLN A 149 ? TYR B 473 GLN B 474 AA3 2 CYS A 163 ? TYR A 164 ? CYS B 488 TYR B 489 AA4 1 MET B 4 ? GLN B 6 ? MET F 4 GLN F 6 AA4 2 VAL B 19 ? ALA B 25 ? VAL F 19 ALA F 25 AA4 3 ASP B 70 ? ILE B 75 ? ASP F 70 ILE F 75 AA4 4 PHE B 62 ? SER B 67 ? PHE F 62 SER F 67 AA5 1 SER B 10 ? ALA B 13 ? SER F 10 ALA F 13 AA5 2 LYS B 104 ? ILE B 107 ? LYS F 104 ILE F 107 AA6 1 SER B 53 ? LEU B 54 ? SER F 53 LEU F 54 AA6 2 LYS B 45 ? TYR B 49 ? LYS F 45 TYR F 49 AA6 3 LEU B 33 ? HIS B 38 ? LEU F 33 HIS F 38 AA6 4 THR B 85 ? GLN B 90 ? THR F 85 GLN F 90 AA6 5 THR B 98 ? PHE B 99 ? THR F 98 PHE F 99 AA7 1 LEU C 4 ? SER C 7 ? LEU G 4 SER G 7 AA7 2 LEU C 18 ? ALA C 24 ? LEU G 18 ALA G 24 AA7 3 SER C 78 ? MET C 83 ? SER G 78 MET G 83 AA7 4 PHE C 68 ? ASP C 73 ? PHE G 68 ASP G 73 AA8 1 LEU C 11 ? VAL C 12 ? LEU G 11 VAL G 12 AA8 2 THR C 120 ? VAL C 121 ? THR G 120 VAL G 121 AA9 1 ILE C 58 ? TYR C 60 ? ILE G 58 TYR G 60 AA9 2 LEU C 45 ? ILE C 51 ? LEU G 45 ILE G 51 AA9 3 MET C 34 ? GLN C 39 ? MET G 34 GLN G 39 AA9 4 LEU C 93 ? TYR C 95 ? LEU G 93 TYR G 95 AA9 5 THR C 117 ? LEU C 118 ? THR G 117 LEU G 118 AB1 1 LYS C 98 ? ASP C 99 ? LYS G 98 ASP G 99 AB1 2 PHE C 110 ? TYR C 112 ? PHE G 110 TYR G 112 AB2 1 MET D 4 ? GLN D 6 ? MET J 4 GLN J 6 AB2 2 VAL D 19 ? ALA D 25 ? VAL J 19 ALA J 25 AB2 3 ASP D 70 ? ILE D 75 ? ASP J 70 ILE J 75 AB2 4 PHE D 62 ? SER D 67 ? PHE J 62 SER J 67 AB3 1 SER D 10 ? ALA D 13 ? SER J 10 ALA J 13 AB3 2 LYS D 104 ? ILE D 107 ? LYS J 104 ILE J 107 AB4 1 SER D 53 ? LEU D 54 ? SER J 53 LEU J 54 AB4 2 LYS D 45 ? TYR D 49 ? LYS J 45 TYR J 49 AB4 3 LEU D 33 ? HIS D 38 ? LEU J 33 HIS J 38 AB4 4 THR D 85 ? GLN D 90 ? THR J 85 GLN J 90 AB4 5 THR D 98 ? PHE D 99 ? THR J 98 PHE J 99 AB5 1 LEU E 4 ? GLU E 6 ? LEU K 4 GLU K 6 AB5 2 LEU E 18 ? ALA E 24 ? LEU K 18 ALA K 24 AB5 3 SER E 78 ? MET E 83 ? SER K 78 MET K 83 AB5 4 PHE E 68 ? ILE E 70 ? PHE K 68 ILE K 70 AB6 1 LEU E 11 ? VAL E 12 ? LEU K 11 VAL K 12 AB6 2 THR E 120 ? VAL E 121 ? THR K 120 VAL K 121 AB7 1 ILE E 58 ? TYR E 60 ? ILE K 58 TYR K 60 AB7 2 LEU E 45 ? ILE E 51 ? LEU K 45 ILE K 51 AB7 3 MET E 34 ? GLN E 39 ? MET K 34 GLN K 39 AB7 4 LEU E 93 ? ASP E 99 ? LEU K 93 ASP K 99 AB7 5 PHE E 110 ? TYR E 112 ? PHE K 110 TYR K 112 AB8 1 ILE E 58 ? TYR E 60 ? ILE K 58 TYR K 60 AB8 2 LEU E 45 ? ILE E 51 ? LEU K 45 ILE K 51 AB8 3 MET E 34 ? GLN E 39 ? MET K 34 GLN K 39 AB8 4 LEU E 93 ? ASP E 99 ? LEU K 93 ASP K 99 AB8 5 THR E 117 ? LEU E 118 ? THR K 117 LEU K 118 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 33 ? N ILE B 358 O VAL A 70 ? O VAL B 395 AA1 2 3 N ILE A 77 ? N ILE B 402 O TYR A 183 ? O TYR B 508 AA1 3 4 O VAL A 186 ? O VAL B 511 N ILE A 109 ? N ILE B 434 AA1 4 5 O GLY A 106 ? O GLY B 431 N TYR A 55 ? N TYR B 380 AA2 1 2 N TYR A 128 ? N TYR B 453 O GLN A 168 ? O GLN B 493 AA3 1 2 N TYR A 148 ? N TYR B 473 O TYR A 164 ? O TYR B 489 AA4 1 2 N THR B 5 ? N THR F 5 O ARG B 24 ? O ARG F 24 AA4 2 3 N ILE B 21 ? N ILE F 21 O LEU B 73 ? O LEU F 73 AA4 3 4 O THR B 74 ? O THR F 74 N SER B 63 ? N SER F 63 AA5 1 2 N LEU B 11 ? N LEU F 11 O GLU B 106 ? O GLU F 106 AA6 1 2 O SER B 53 ? O SER F 53 N TYR B 49 ? N TYR F 49 AA6 2 3 O LYS B 45 ? O LYS F 45 N GLN B 37 ? N GLN F 37 AA6 3 4 N ASN B 34 ? N ASN F 34 O GLN B 89 ? O GLN F 89 AA6 4 5 N GLN B 90 ? N GLN F 90 O THR B 98 ? O THR F 98 AA7 1 2 N VAL C 5 ? N VAL G 5 O ALA C 23 ? O ALA G 23 AA7 2 3 N LEU C 18 ? N LEU G 18 O MET C 83 ? O MET G 83 AA7 3 4 O GLN C 82 ? O GLN G 82 N THR C 69 ? N THR G 69 AA8 1 2 N VAL C 12 ? N VAL G 12 O THR C 120 ? O THR G 120 AA9 1 2 O ASP C 59 ? O ASP G 59 N GLY C 50 ? N GLY G 50 AA9 2 3 O GLU C 46 ? O GLU G 46 N ARG C 38 ? N ARG G 38 AA9 3 4 N GLN C 39 ? N GLN G 39 O LEU C 93 ? O LEU G 93 AA9 4 5 N TYR C 94 ? N TYR G 94 O THR C 117 ? O THR G 117 AB1 1 2 N LYS C 98 ? N LYS G 98 O ASP C 111 ? O ASP G 111 AB2 1 2 N THR D 5 ? N THR J 5 O ARG D 24 ? O ARG J 24 AB2 2 3 N ILE D 21 ? N ILE J 21 O LEU D 73 ? O LEU J 73 AB2 3 4 O THR D 72 ? O THR J 72 N SER D 65 ? N SER J 65 AB3 1 2 N LEU D 11 ? N LEU J 11 O GLU D 106 ? O GLU J 106 AB4 1 2 O SER D 53 ? O SER J 53 N TYR D 49 ? N TYR J 49 AB4 2 3 O LEU D 47 ? O LEU J 47 N TRP D 35 ? N TRP J 35 AB4 3 4 N HIS D 38 ? N HIS J 38 O THR D 85 ? O THR J 85 AB4 4 5 N GLN D 90 ? N GLN J 90 O THR D 98 ? O THR J 98 AB5 1 2 N VAL E 5 ? N VAL K 5 O ALA E 23 ? O ALA K 23 AB5 2 3 N LEU E 18 ? N LEU K 18 O MET E 83 ? O MET K 83 AB5 3 4 O GLN E 82 ? O GLN K 82 N THR E 69 ? N THR K 69 AB6 1 2 N VAL E 12 ? N VAL K 12 O THR E 120 ? O THR K 120 AB7 1 2 O ASP E 59 ? O ASP K 59 N GLY E 50 ? N GLY K 50 AB7 2 3 O GLU E 46 ? O GLU K 46 N ARG E 38 ? N ARG K 38 AB7 3 4 N GLN E 39 ? N GLN K 39 O LEU E 93 ? O LEU K 93 AB7 4 5 N LYS E 98 ? N LYS K 98 O TYR E 112 ? O TYR K 112 AB8 1 2 O ASP E 59 ? O ASP K 59 N GLY E 50 ? N GLY K 50 AB8 2 3 O GLU E 46 ? O GLU K 46 N ARG E 38 ? N ARG K 38 AB8 3 4 N GLN E 39 ? N GLN K 39 O LEU E 93 ? O LEU K 93 AB8 4 5 N TYR E 94 ? N TYR K 94 O THR E 117 ? O THR K 117 # _atom_sites.entry_id 7WS7 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 326 326 ILE ILE B . n A 1 2 VAL 2 327 327 VAL VAL B . n A 1 3 ARG 3 328 328 ARG ARG B . n A 1 4 PHE 4 329 329 PHE PHE B . n A 1 5 PRO 5 330 330 PRO PRO B . n A 1 6 ASN 6 331 331 ASN ASN B . n A 1 7 ILE 7 332 332 ILE ILE B . n A 1 8 THR 8 333 333 THR THR B . n A 1 9 ASN 9 334 334 ASN ASN B . n A 1 10 LEU 10 335 335 LEU LEU B . n A 1 11 CYS 11 336 336 CYS CYS B . n A 1 12 PRO 12 337 337 PRO PRO B . n A 1 13 PHE 13 338 338 PHE PHE B . n A 1 14 GLY 14 339 339 GLY GLY B . n A 1 15 GLU 15 340 340 GLU GLU B . n A 1 16 VAL 16 341 341 VAL VAL B . n A 1 17 PHE 17 342 342 PHE PHE B . n A 1 18 ASN 18 343 343 ASN ASN B . n A 1 19 ALA 19 344 344 ALA ALA B . n A 1 20 THR 20 345 345 THR THR B . n A 1 21 ARG 21 346 346 ARG ARG B . n A 1 22 PHE 22 347 347 PHE PHE B . n A 1 23 ALA 23 348 348 ALA ALA B . n A 1 24 SER 24 349 349 SER SER B . n A 1 25 VAL 25 350 350 VAL VAL B . n A 1 26 TYR 26 351 351 TYR TYR B . n A 1 27 ALA 27 352 352 ALA ALA B . n A 1 28 TRP 28 353 353 TRP TRP B . n A 1 29 ASN 29 354 354 ASN ASN B . n A 1 30 ARG 30 355 355 ARG ARG B . n A 1 31 LYS 31 356 356 LYS LYS B . n A 1 32 ARG 32 357 357 ARG ARG B . n A 1 33 ILE 33 358 358 ILE ILE B . n A 1 34 SER 34 359 359 SER SER B . n A 1 35 ASN 35 360 360 ASN ASN B . n A 1 36 CYS 36 361 361 CYS CYS B . n A 1 37 VAL 37 362 362 VAL VAL B . n A 1 38 ALA 38 363 363 ALA ALA B . n A 1 39 ASP 39 364 364 ASP ASP B . n A 1 40 TYR 40 365 365 TYR TYR B . n A 1 41 SER 41 366 366 SER SER B . n A 1 42 VAL 42 367 367 VAL VAL B . n A 1 43 LEU 43 368 368 LEU LEU B . n A 1 44 TYR 44 369 369 TYR TYR B . n A 1 45 ASN 45 370 370 ASN ASN B . n A 1 46 SER 46 371 371 SER SER B . n A 1 47 ALA 47 372 372 ALA ALA B . n A 1 48 SER 48 373 373 SER SER B . n A 1 49 PHE 49 374 374 PHE PHE B . n A 1 50 SER 50 375 375 SER SER B . n A 1 51 THR 51 376 376 THR THR B . n A 1 52 PHE 52 377 377 PHE PHE B . n A 1 53 LYS 53 378 378 LYS LYS B . n A 1 54 CYS 54 379 379 CYS CYS B . n A 1 55 TYR 55 380 380 TYR TYR B . n A 1 56 GLY 56 381 381 GLY GLY B . n A 1 57 VAL 57 382 382 VAL VAL B . n A 1 58 SER 58 383 383 SER SER B . n A 1 59 PRO 59 384 384 PRO PRO B . n A 1 60 THR 60 385 385 THR THR B . n A 1 61 LYS 61 386 386 LYS LYS B . n A 1 62 LEU 62 387 387 LEU LEU B . n A 1 63 ASN 63 388 388 ASN ASN B . n A 1 64 ASP 64 389 389 ASP ASP B . n A 1 65 LEU 65 390 390 LEU LEU B . n A 1 66 CYS 66 391 391 CYS CYS B . n A 1 67 PHE 67 392 392 PHE PHE B . n A 1 68 THR 68 393 393 THR THR B . n A 1 69 ASN 69 394 394 ASN ASN B . n A 1 70 VAL 70 395 395 VAL VAL B . n A 1 71 TYR 71 396 396 TYR TYR B . n A 1 72 ALA 72 397 397 ALA ALA B . n A 1 73 ASP 73 398 398 ASP ASP B . n A 1 74 SER 74 399 399 SER SER B . n A 1 75 PHE 75 400 400 PHE PHE B . n A 1 76 VAL 76 401 401 VAL VAL B . n A 1 77 ILE 77 402 402 ILE ILE B . n A 1 78 ARG 78 403 403 ARG ARG B . n A 1 79 GLY 79 404 404 GLY GLY B . n A 1 80 ASP 80 405 405 ASP ASP B . n A 1 81 GLU 81 406 406 GLU GLU B . n A 1 82 VAL 82 407 407 VAL VAL B . n A 1 83 ARG 83 408 408 ARG ARG B . n A 1 84 GLN 84 409 409 GLN GLN B . n A 1 85 ILE 85 410 410 ILE ILE B . n A 1 86 ALA 86 411 411 ALA ALA B . n A 1 87 PRO 87 412 412 PRO PRO B . n A 1 88 GLY 88 413 413 GLY GLY B . n A 1 89 GLN 89 414 414 GLN GLN B . n A 1 90 THR 90 415 415 THR THR B . n A 1 91 GLY 91 416 416 GLY GLY B . n A 1 92 LYS 92 417 417 LYS LYS B . n A 1 93 ILE 93 418 418 ILE ILE B . n A 1 94 ALA 94 419 419 ALA ALA B . n A 1 95 ASP 95 420 420 ASP ASP B . n A 1 96 TYR 96 421 421 TYR TYR B . n A 1 97 ASN 97 422 422 ASN ASN B . n A 1 98 TYR 98 423 423 TYR TYR B . n A 1 99 LYS 99 424 424 LYS LYS B . n A 1 100 LEU 100 425 425 LEU LEU B . n A 1 101 PRO 101 426 426 PRO PRO B . n A 1 102 ASP 102 427 427 ASP ASP B . n A 1 103 ASP 103 428 428 ASP ASP B . n A 1 104 PHE 104 429 429 PHE PHE B . n A 1 105 THR 105 430 430 THR THR B . n A 1 106 GLY 106 431 431 GLY GLY B . n A 1 107 CYS 107 432 432 CYS CYS B . n A 1 108 VAL 108 433 433 VAL VAL B . n A 1 109 ILE 109 434 434 ILE ILE B . n A 1 110 ALA 110 435 435 ALA ALA B . n A 1 111 TRP 111 436 436 TRP TRP B . n A 1 112 ASN 112 437 437 ASN ASN B . n A 1 113 SER 113 438 438 SER SER B . n A 1 114 ASN 114 439 439 ASN ASN B . n A 1 115 ASN 115 440 440 ASN ASN B . n A 1 116 LEU 116 441 441 LEU LEU B . n A 1 117 ASP 117 442 442 ASP ASP B . n A 1 118 SER 118 443 443 SER SER B . n A 1 119 LYS 119 444 444 LYS LYS B . n A 1 120 VAL 120 445 445 VAL VAL B . n A 1 121 GLY 121 446 446 GLY GLY B . n A 1 122 GLY 122 447 447 GLY GLY B . n A 1 123 ASN 123 448 448 ASN ASN B . n A 1 124 TYR 124 449 449 TYR TYR B . n A 1 125 ASN 125 450 450 ASN ASN B . n A 1 126 TYR 126 451 451 TYR TYR B . n A 1 127 LEU 127 452 452 LEU LEU B . n A 1 128 TYR 128 453 453 TYR TYR B . n A 1 129 ARG 129 454 454 ARG ARG B . n A 1 130 LEU 130 455 455 LEU LEU B . n A 1 131 PHE 131 456 456 PHE PHE B . n A 1 132 ARG 132 457 457 ARG ARG B . n A 1 133 LYS 133 458 458 LYS LYS B . n A 1 134 SER 134 459 459 SER SER B . n A 1 135 ASN 135 460 460 ASN ASN B . n A 1 136 LEU 136 461 461 LEU LEU B . n A 1 137 LYS 137 462 462 LYS LYS B . n A 1 138 PRO 138 463 463 PRO PRO B . n A 1 139 PHE 139 464 464 PHE PHE B . n A 1 140 GLU 140 465 465 GLU GLU B . n A 1 141 ARG 141 466 466 ARG ARG B . n A 1 142 ASP 142 467 467 ASP ASP B . n A 1 143 ILE 143 468 468 ILE ILE B . n A 1 144 SER 144 469 469 SER SER B . n A 1 145 THR 145 470 470 THR THR B . n A 1 146 GLU 146 471 471 GLU GLU B . n A 1 147 ILE 147 472 472 ILE ILE B . n A 1 148 TYR 148 473 473 TYR TYR B . n A 1 149 GLN 149 474 474 GLN GLN B . n A 1 150 ALA 150 475 475 ALA ALA B . n A 1 151 GLY 151 476 476 GLY GLY B . n A 1 152 SER 152 477 477 SER SER B . n A 1 153 THR 153 478 478 THR THR B . n A 1 154 PRO 154 479 479 PRO PRO B . n A 1 155 CYS 155 480 480 CYS CYS B . n A 1 156 ASN 156 481 481 ASN ASN B . n A 1 157 GLY 157 482 482 GLY GLY B . n A 1 158 VAL 158 483 483 VAL VAL B . n A 1 159 GLU 159 484 484 GLU GLU B . n A 1 160 GLY 160 485 485 GLY GLY B . n A 1 161 PHE 161 486 486 PHE PHE B . n A 1 162 ASN 162 487 487 ASN ASN B . n A 1 163 CYS 163 488 488 CYS CYS B . n A 1 164 TYR 164 489 489 TYR TYR B . n A 1 165 PHE 165 490 490 PHE PHE B . n A 1 166 PRO 166 491 491 PRO PRO B . n A 1 167 LEU 167 492 492 LEU LEU B . n A 1 168 GLN 168 493 493 GLN GLN B . n A 1 169 SER 169 494 494 SER SER B . n A 1 170 TYR 170 495 495 TYR TYR B . n A 1 171 GLY 171 496 496 GLY GLY B . n A 1 172 PHE 172 497 497 PHE PHE B . n A 1 173 GLN 173 498 498 GLN GLN B . n A 1 174 PRO 174 499 499 PRO PRO B . n A 1 175 THR 175 500 500 THR THR B . n A 1 176 ASN 176 501 501 ASN ASN B . n A 1 177 GLY 177 502 502 GLY GLY B . n A 1 178 VAL 178 503 503 VAL VAL B . n A 1 179 GLY 179 504 504 GLY GLY B . n A 1 180 TYR 180 505 505 TYR TYR B . n A 1 181 GLN 181 506 506 GLN GLN B . n A 1 182 PRO 182 507 507 PRO PRO B . n A 1 183 TYR 183 508 508 TYR TYR B . n A 1 184 ARG 184 509 509 ARG ARG B . n A 1 185 VAL 185 510 510 VAL VAL B . n A 1 186 VAL 186 511 511 VAL VAL B . n A 1 187 VAL 187 512 512 VAL VAL B . n A 1 188 LEU 188 513 513 LEU LEU B . n A 1 189 SER 189 514 514 SER SER B . n A 1 190 PHE 190 515 515 PHE PHE B . n A 1 191 GLU 191 516 516 GLU GLU B . n A 1 192 LEU 192 517 517 LEU LEU B . n A 1 193 LEU 193 518 518 LEU LEU B . n A 1 194 HIS 194 519 519 HIS HIS B . n A 1 195 ALA 195 520 520 ALA ALA B . n A 1 196 PRO 196 521 521 PRO PRO B . n A 1 197 ALA 197 522 522 ALA ALA B . n A 1 198 THR 198 523 523 THR THR B . n A 1 199 VAL 199 524 524 VAL VAL B . n A 1 200 CYS 200 525 525 CYS CYS B . n A 1 201 GLY 201 526 526 GLY GLY B . n A 1 202 PRO 202 527 527 PRO PRO B . n A 1 203 LYS 203 528 528 LYS LYS B . n A 1 204 LYS 204 529 529 LYS LYS B . n A 1 205 SER 205 530 530 SER SER B . n B 2 1 ASP 1 1 1 ASP ASP F . n B 2 2 ILE 2 2 2 ILE ILE F . n B 2 3 GLN 3 3 3 GLN GLN F . n B 2 4 MET 4 4 4 MET MET F . n B 2 5 THR 5 5 5 THR THR F . n B 2 6 GLN 6 6 6 GLN GLN F . n B 2 7 SER 7 7 7 SER SER F . n B 2 8 PRO 8 8 8 PRO PRO F . n B 2 9 SER 9 9 9 SER SER F . n B 2 10 SER 10 10 10 SER SER F . n B 2 11 LEU 11 11 11 LEU LEU F . n B 2 12 SER 12 12 12 SER SER F . n B 2 13 ALA 13 13 13 ALA ALA F . n B 2 14 SER 14 14 14 SER SER F . n B 2 15 VAL 15 15 15 VAL VAL F . n B 2 16 GLY 16 16 16 GLY GLY F . n B 2 17 ASP 17 17 17 ASP ASP F . n B 2 18 ARG 18 18 18 ARG ARG F . n B 2 19 VAL 19 19 19 VAL VAL F . n B 2 20 THR 20 20 20 THR THR F . n B 2 21 ILE 21 21 21 ILE ILE F . n B 2 22 THR 22 22 22 THR THR F . n B 2 23 CYS 23 23 23 CYS CYS F . n B 2 24 ARG 24 24 24 ARG ARG F . n B 2 25 ALA 25 25 25 ALA ALA F . n B 2 26 SER 26 26 26 SER SER F . n B 2 27 GLN 27 27 27 GLN GLN F . n B 2 28 SER 28 28 28 SER SER F . n B 2 29 ILE 29 29 29 ILE ILE F . n B 2 30 SER 30 30 30 SER SER F . n B 2 31 SER 31 31 31 SER SER F . n B 2 32 TYR 32 32 32 TYR TYR F . n B 2 33 LEU 33 33 33 LEU LEU F . n B 2 34 ASN 34 34 34 ASN ASN F . n B 2 35 TRP 35 35 35 TRP TRP F . n B 2 36 PHE 36 36 36 PHE PHE F . n B 2 37 GLN 37 37 37 GLN GLN F . n B 2 38 HIS 38 38 38 HIS HIS F . n B 2 39 LYS 39 39 39 LYS LYS F . n B 2 40 PRO 40 40 40 PRO PRO F . n B 2 41 GLY 41 41 41 GLY GLY F . n B 2 42 LYS 42 42 42 LYS LYS F . n B 2 43 ALA 43 43 43 ALA ALA F . n B 2 44 PRO 44 44 44 PRO PRO F . n B 2 45 LYS 45 45 45 LYS LYS F . n B 2 46 LEU 46 46 46 LEU LEU F . n B 2 47 LEU 47 47 47 LEU LEU F . n B 2 48 ILE 48 48 48 ILE ILE F . n B 2 49 TYR 49 49 49 TYR TYR F . n B 2 50 GLY 50 50 50 GLY GLY F . n B 2 51 ALA 51 51 51 ALA ALA F . n B 2 52 SER 52 52 52 SER SER F . n B 2 53 SER 53 53 53 SER SER F . n B 2 54 LEU 54 54 54 LEU LEU F . n B 2 55 GLN 55 55 55 GLN GLN F . n B 2 56 SER 56 56 56 SER SER F . n B 2 57 GLY 57 57 57 GLY GLY F . n B 2 58 VAL 58 58 58 VAL VAL F . n B 2 59 PRO 59 59 59 PRO PRO F . n B 2 60 SER 60 60 60 SER SER F . n B 2 61 ARG 61 61 61 ARG ARG F . n B 2 62 PHE 62 62 62 PHE PHE F . n B 2 63 SER 63 63 63 SER SER F . n B 2 64 GLY 64 64 64 GLY GLY F . n B 2 65 SER 65 65 65 SER SER F . n B 2 66 GLY 66 66 66 GLY GLY F . n B 2 67 SER 67 67 67 SER SER F . n B 2 68 GLY 68 68 68 GLY GLY F . n B 2 69 THR 69 69 69 THR THR F . n B 2 70 ASP 70 70 70 ASP ASP F . n B 2 71 PHE 71 71 71 PHE PHE F . n B 2 72 THR 72 72 72 THR THR F . n B 2 73 LEU 73 73 73 LEU LEU F . n B 2 74 THR 74 74 74 THR THR F . n B 2 75 ILE 75 75 75 ILE ILE F . n B 2 76 SER 76 76 76 SER SER F . n B 2 77 SER 77 77 77 SER SER F . n B 2 78 LEU 78 78 78 LEU LEU F . n B 2 79 GLN 79 79 79 GLN GLN F . n B 2 80 PRO 80 80 80 PRO PRO F . n B 2 81 GLU 81 81 81 GLU GLU F . n B 2 82 ASP 82 82 82 ASP ASP F . n B 2 83 PHE 83 83 83 PHE PHE F . n B 2 84 ALA 84 84 84 ALA ALA F . n B 2 85 THR 85 85 85 THR THR F . n B 2 86 TYR 86 86 86 TYR TYR F . n B 2 87 TYR 87 87 87 TYR TYR F . n B 2 88 CYS 88 88 88 CYS CYS F . n B 2 89 GLN 89 89 89 GLN GLN F . n B 2 90 GLN 90 90 90 GLN GLN F . n B 2 91 SER 91 91 91 SER SER F . n B 2 92 TYR 92 92 92 TYR TYR F . n B 2 93 SER 93 93 93 SER SER F . n B 2 94 THR 94 94 94 THR THR F . n B 2 95 PRO 95 95 95 PRO PRO F . n B 2 96 PRO 96 96 96 PRO PRO F . n B 2 97 TYR 97 97 97 TYR TYR F . n B 2 98 THR 98 98 98 THR THR F . n B 2 99 PHE 99 99 99 PHE PHE F . n B 2 100 GLY 100 100 100 GLY GLY F . n B 2 101 GLN 101 101 101 GLN GLN F . n B 2 102 GLY 102 102 102 GLY GLY F . n B 2 103 THR 103 103 103 THR THR F . n B 2 104 LYS 104 104 104 LYS LYS F . n B 2 105 LEU 105 105 105 LEU LEU F . n B 2 106 GLU 106 106 106 GLU GLU F . n B 2 107 ILE 107 107 107 ILE ILE F . n B 2 108 LYS 108 108 108 LYS LYS F . n C 3 1 GLU 1 1 1 GLU GLU G . n C 3 2 VAL 2 2 2 VAL VAL G . n C 3 3 GLN 3 3 3 GLN GLN G . n C 3 4 LEU 4 4 4 LEU LEU G . n C 3 5 VAL 5 5 5 VAL VAL G . n C 3 6 GLU 6 6 6 GLU GLU G . n C 3 7 SER 7 7 7 SER SER G . n C 3 8 GLY 8 8 8 GLY GLY G . n C 3 9 GLY 9 9 9 GLY GLY G . n C 3 10 GLY 10 10 10 GLY GLY G . n C 3 11 LEU 11 11 11 LEU LEU G . n C 3 12 VAL 12 12 12 VAL VAL G . n C 3 13 GLN 13 13 13 GLN GLN G . n C 3 14 PRO 14 14 14 PRO PRO G . n C 3 15 GLY 15 15 15 GLY GLY G . n C 3 16 ARG 16 16 16 ARG ARG G . n C 3 17 SER 17 17 17 SER SER G . n C 3 18 LEU 18 18 18 LEU LEU G . n C 3 19 ARG 19 19 19 ARG ARG G . n C 3 20 LEU 20 20 20 LEU LEU G . n C 3 21 SER 21 21 21 SER SER G . n C 3 22 CYS 22 22 22 CYS CYS G . n C 3 23 ALA 23 23 23 ALA ALA G . n C 3 24 ALA 24 24 24 ALA ALA G . n C 3 25 SER 25 25 25 SER SER G . n C 3 26 GLY 26 26 26 GLY GLY G . n C 3 27 PHE 27 27 27 PHE PHE G . n C 3 28 THR 28 28 28 THR THR G . n C 3 29 PHE 29 29 29 PHE PHE G . n C 3 30 ASP 30 30 30 ASP ASP G . n C 3 31 ASP 31 31 31 ASP ASP G . n C 3 32 TYR 32 32 32 TYR TYR G . n C 3 33 ALA 33 33 33 ALA ALA G . n C 3 34 MET 34 34 34 MET MET G . n C 3 35 HIS 35 35 35 HIS HIS G . n C 3 36 TRP 36 36 36 TRP TRP G . n C 3 37 VAL 37 37 37 VAL VAL G . n C 3 38 ARG 38 38 38 ARG ARG G . n C 3 39 GLN 39 39 39 GLN GLN G . n C 3 40 ALA 40 40 40 ALA ALA G . n C 3 41 PRO 41 41 41 PRO PRO G . n C 3 42 GLY 42 42 42 GLY GLY G . n C 3 43 LYS 43 43 43 LYS LYS G . n C 3 44 GLY 44 44 44 GLY GLY G . n C 3 45 LEU 45 45 45 LEU LEU G . n C 3 46 GLU 46 46 46 GLU GLU G . n C 3 47 TRP 47 47 47 TRP TRP G . n C 3 48 VAL 48 48 48 VAL VAL G . n C 3 49 SER 49 49 49 SER SER G . n C 3 50 GLY 50 50 50 GLY GLY G . n C 3 51 ILE 51 51 51 ILE ILE G . n C 3 52 SER 52 52 52 SER SER G . n C 3 53 TRP 53 53 53 TRP TRP G . n C 3 54 ASN 54 54 54 ASN ASN G . n C 3 55 SER 55 55 55 SER SER G . n C 3 56 ASP 56 56 56 ASP ASP G . n C 3 57 SER 57 57 57 SER SER G . n C 3 58 ILE 58 58 58 ILE ILE G . n C 3 59 ASP 59 59 59 ASP ASP G . n C 3 60 TYR 60 60 60 TYR TYR G . n C 3 61 ALA 61 61 61 ALA ALA G . n C 3 62 ASP 62 62 62 ASP ASP G . n C 3 63 SER 63 63 63 SER SER G . n C 3 64 VAL 64 64 64 VAL VAL G . n C 3 65 LYS 65 65 65 LYS LYS G . n C 3 66 GLY 66 66 66 GLY GLY G . n C 3 67 ARG 67 67 67 ARG ARG G . n C 3 68 PHE 68 68 68 PHE PHE G . n C 3 69 THR 69 69 69 THR THR G . n C 3 70 ILE 70 70 70 ILE ILE G . n C 3 71 SER 71 71 71 SER SER G . n C 3 72 ARG 72 72 72 ARG ARG G . n C 3 73 ASP 73 73 73 ASP ASP G . n C 3 74 ASN 74 74 74 ASN ASN G . n C 3 75 ALA 75 75 75 ALA ALA G . n C 3 76 LYS 76 76 76 LYS LYS G . n C 3 77 ASN 77 77 77 ASN ASN G . n C 3 78 SER 78 78 78 SER SER G . n C 3 79 LEU 79 79 79 LEU LEU G . n C 3 80 TYR 80 80 80 TYR TYR G . n C 3 81 LEU 81 81 81 LEU LEU G . n C 3 82 GLN 82 82 82 GLN GLN G . n C 3 83 MET 83 83 83 MET MET G . n C 3 84 ASN 84 84 84 ASN ASN G . n C 3 85 SER 85 85 85 SER SER G . n C 3 86 LEU 86 86 86 LEU LEU G . n C 3 87 ARG 87 87 87 ARG ARG G . n C 3 88 ALA 88 88 88 ALA ALA G . n C 3 89 GLU 89 89 89 GLU GLU G . n C 3 90 ASP 90 90 90 ASP ASP G . n C 3 91 THR 91 91 91 THR THR G . n C 3 92 ALA 92 92 92 ALA ALA G . n C 3 93 LEU 93 93 93 LEU LEU G . n C 3 94 TYR 94 94 94 TYR TYR G . n C 3 95 TYR 95 95 95 TYR TYR G . n C 3 96 CYS 96 96 96 CYS CYS G . n C 3 97 ALA 97 97 97 ALA ALA G . n C 3 98 LYS 98 98 98 LYS LYS G . n C 3 99 ASP 99 99 99 ASP ASP G . n C 3 100 ARG 100 100 100 ARG ARG G . n C 3 101 GLY 101 101 101 GLY GLY G . n C 3 102 TYR 102 102 102 TYR TYR G . n C 3 103 GLU 103 103 103 GLU GLU G . n C 3 104 ILE 104 104 104 ILE ILE G . n C 3 105 LEU 105 105 105 LEU LEU G . n C 3 106 THR 106 106 106 THR THR G . n C 3 107 PRO 107 107 107 PRO PRO G . n C 3 108 ALA 108 108 108 ALA ALA G . n C 3 109 SER 109 109 109 SER SER G . n C 3 110 PHE 110 110 110 PHE PHE G . n C 3 111 ASP 111 111 111 ASP ASP G . n C 3 112 TYR 112 112 112 TYR TYR G . n C 3 113 TRP 113 113 113 TRP TRP G . n C 3 114 GLY 114 114 114 GLY GLY G . n C 3 115 GLN 115 115 115 GLN GLN G . n C 3 116 GLY 116 116 116 GLY GLY G . n C 3 117 THR 117 117 117 THR THR G . n C 3 118 LEU 118 118 118 LEU LEU G . n C 3 119 VAL 119 119 119 VAL VAL G . n C 3 120 THR 120 120 120 THR THR G . n C 3 121 VAL 121 121 121 VAL VAL G . n C 3 122 SER 122 122 122 SER SER G . n C 3 123 SER 123 123 123 SER SER G . n C 3 124 ALA 124 124 124 ALA ALA G . n C 3 125 SER 125 125 125 SER SER G . n D 2 1 ASP 1 1 1 ASP ASP J . n D 2 2 ILE 2 2 2 ILE ILE J . n D 2 3 GLN 3 3 3 GLN GLN J . n D 2 4 MET 4 4 4 MET MET J . n D 2 5 THR 5 5 5 THR THR J . n D 2 6 GLN 6 6 6 GLN GLN J . n D 2 7 SER 7 7 7 SER SER J . n D 2 8 PRO 8 8 8 PRO PRO J . n D 2 9 SER 9 9 9 SER SER J . n D 2 10 SER 10 10 10 SER SER J . n D 2 11 LEU 11 11 11 LEU LEU J . n D 2 12 SER 12 12 12 SER SER J . n D 2 13 ALA 13 13 13 ALA ALA J . n D 2 14 SER 14 14 14 SER SER J . n D 2 15 VAL 15 15 15 VAL VAL J . n D 2 16 GLY 16 16 16 GLY GLY J . n D 2 17 ASP 17 17 17 ASP ASP J . n D 2 18 ARG 18 18 18 ARG ARG J . n D 2 19 VAL 19 19 19 VAL VAL J . n D 2 20 THR 20 20 20 THR THR J . n D 2 21 ILE 21 21 21 ILE ILE J . n D 2 22 THR 22 22 22 THR THR J . n D 2 23 CYS 23 23 23 CYS CYS J . n D 2 24 ARG 24 24 24 ARG ARG J . n D 2 25 ALA 25 25 25 ALA ALA J . n D 2 26 SER 26 26 26 SER SER J . n D 2 27 GLN 27 27 27 GLN GLN J . n D 2 28 SER 28 28 28 SER SER J . n D 2 29 ILE 29 29 29 ILE ILE J . n D 2 30 SER 30 30 30 SER SER J . n D 2 31 SER 31 31 31 SER SER J . n D 2 32 TYR 32 32 32 TYR TYR J . n D 2 33 LEU 33 33 33 LEU LEU J . n D 2 34 ASN 34 34 34 ASN ASN J . n D 2 35 TRP 35 35 35 TRP TRP J . n D 2 36 PHE 36 36 36 PHE PHE J . n D 2 37 GLN 37 37 37 GLN GLN J . n D 2 38 HIS 38 38 38 HIS HIS J . n D 2 39 LYS 39 39 39 LYS LYS J . n D 2 40 PRO 40 40 40 PRO PRO J . n D 2 41 GLY 41 41 41 GLY GLY J . n D 2 42 LYS 42 42 42 LYS LYS J . n D 2 43 ALA 43 43 43 ALA ALA J . n D 2 44 PRO 44 44 44 PRO PRO J . n D 2 45 LYS 45 45 45 LYS LYS J . n D 2 46 LEU 46 46 46 LEU LEU J . n D 2 47 LEU 47 47 47 LEU LEU J . n D 2 48 ILE 48 48 48 ILE ILE J . n D 2 49 TYR 49 49 49 TYR TYR J . n D 2 50 GLY 50 50 50 GLY GLY J . n D 2 51 ALA 51 51 51 ALA ALA J . n D 2 52 SER 52 52 52 SER SER J . n D 2 53 SER 53 53 53 SER SER J . n D 2 54 LEU 54 54 54 LEU LEU J . n D 2 55 GLN 55 55 55 GLN GLN J . n D 2 56 SER 56 56 56 SER SER J . n D 2 57 GLY 57 57 57 GLY GLY J . n D 2 58 VAL 58 58 58 VAL VAL J . n D 2 59 PRO 59 59 59 PRO PRO J . n D 2 60 SER 60 60 60 SER SER J . n D 2 61 ARG 61 61 61 ARG ARG J . n D 2 62 PHE 62 62 62 PHE PHE J . n D 2 63 SER 63 63 63 SER SER J . n D 2 64 GLY 64 64 64 GLY GLY J . n D 2 65 SER 65 65 65 SER SER J . n D 2 66 GLY 66 66 66 GLY GLY J . n D 2 67 SER 67 67 67 SER SER J . n D 2 68 GLY 68 68 68 GLY GLY J . n D 2 69 THR 69 69 69 THR THR J . n D 2 70 ASP 70 70 70 ASP ASP J . n D 2 71 PHE 71 71 71 PHE PHE J . n D 2 72 THR 72 72 72 THR THR J . n D 2 73 LEU 73 73 73 LEU LEU J . n D 2 74 THR 74 74 74 THR THR J . n D 2 75 ILE 75 75 75 ILE ILE J . n D 2 76 SER 76 76 76 SER SER J . n D 2 77 SER 77 77 77 SER SER J . n D 2 78 LEU 78 78 78 LEU LEU J . n D 2 79 GLN 79 79 79 GLN GLN J . n D 2 80 PRO 80 80 80 PRO PRO J . n D 2 81 GLU 81 81 81 GLU GLU J . n D 2 82 ASP 82 82 82 ASP ASP J . n D 2 83 PHE 83 83 83 PHE PHE J . n D 2 84 ALA 84 84 84 ALA ALA J . n D 2 85 THR 85 85 85 THR THR J . n D 2 86 TYR 86 86 86 TYR TYR J . n D 2 87 TYR 87 87 87 TYR TYR J . n D 2 88 CYS 88 88 88 CYS CYS J . n D 2 89 GLN 89 89 89 GLN GLN J . n D 2 90 GLN 90 90 90 GLN GLN J . n D 2 91 SER 91 91 91 SER SER J . n D 2 92 TYR 92 92 92 TYR TYR J . n D 2 93 SER 93 93 93 SER SER J . n D 2 94 THR 94 94 94 THR THR J . n D 2 95 PRO 95 95 95 PRO PRO J . n D 2 96 PRO 96 96 96 PRO PRO J . n D 2 97 TYR 97 97 97 TYR TYR J . n D 2 98 THR 98 98 98 THR THR J . n D 2 99 PHE 99 99 99 PHE PHE J . n D 2 100 GLY 100 100 100 GLY GLY J . n D 2 101 GLN 101 101 101 GLN GLN J . n D 2 102 GLY 102 102 102 GLY GLY J . n D 2 103 THR 103 103 103 THR THR J . n D 2 104 LYS 104 104 104 LYS LYS J . n D 2 105 LEU 105 105 105 LEU LEU J . n D 2 106 GLU 106 106 106 GLU GLU J . n D 2 107 ILE 107 107 107 ILE ILE J . n D 2 108 LYS 108 108 108 LYS LYS J . n E 3 1 GLU 1 1 1 GLU GLU K . n E 3 2 VAL 2 2 2 VAL VAL K . n E 3 3 GLN 3 3 3 GLN GLN K . n E 3 4 LEU 4 4 4 LEU LEU K . n E 3 5 VAL 5 5 5 VAL VAL K . n E 3 6 GLU 6 6 6 GLU GLU K . n E 3 7 SER 7 7 7 SER SER K . n E 3 8 GLY 8 8 8 GLY GLY K . n E 3 9 GLY 9 9 9 GLY GLY K . n E 3 10 GLY 10 10 10 GLY GLY K . n E 3 11 LEU 11 11 11 LEU LEU K . n E 3 12 VAL 12 12 12 VAL VAL K . n E 3 13 GLN 13 13 13 GLN GLN K . n E 3 14 PRO 14 14 14 PRO PRO K . n E 3 15 GLY 15 15 15 GLY GLY K . n E 3 16 ARG 16 16 16 ARG ARG K . n E 3 17 SER 17 17 17 SER SER K . n E 3 18 LEU 18 18 18 LEU LEU K . n E 3 19 ARG 19 19 19 ARG ARG K . n E 3 20 LEU 20 20 20 LEU LEU K . n E 3 21 SER 21 21 21 SER SER K . n E 3 22 CYS 22 22 22 CYS CYS K . n E 3 23 ALA 23 23 23 ALA ALA K . n E 3 24 ALA 24 24 24 ALA ALA K . n E 3 25 SER 25 25 25 SER SER K . n E 3 26 GLY 26 26 26 GLY GLY K . n E 3 27 PHE 27 27 27 PHE PHE K . n E 3 28 THR 28 28 28 THR THR K . n E 3 29 PHE 29 29 29 PHE PHE K . n E 3 30 ASP 30 30 30 ASP ASP K . n E 3 31 ASP 31 31 31 ASP ASP K . n E 3 32 TYR 32 32 32 TYR TYR K . n E 3 33 ALA 33 33 33 ALA ALA K . n E 3 34 MET 34 34 34 MET MET K . n E 3 35 HIS 35 35 35 HIS HIS K . n E 3 36 TRP 36 36 36 TRP TRP K . n E 3 37 VAL 37 37 37 VAL VAL K . n E 3 38 ARG 38 38 38 ARG ARG K . n E 3 39 GLN 39 39 39 GLN GLN K . n E 3 40 ALA 40 40 40 ALA ALA K . n E 3 41 PRO 41 41 41 PRO PRO K . n E 3 42 GLY 42 42 42 GLY GLY K . n E 3 43 LYS 43 43 43 LYS LYS K . n E 3 44 GLY 44 44 44 GLY GLY K . n E 3 45 LEU 45 45 45 LEU LEU K . n E 3 46 GLU 46 46 46 GLU GLU K . n E 3 47 TRP 47 47 47 TRP TRP K . n E 3 48 VAL 48 48 48 VAL VAL K . n E 3 49 SER 49 49 49 SER SER K . n E 3 50 GLY 50 50 50 GLY GLY K . n E 3 51 ILE 51 51 51 ILE ILE K . n E 3 52 SER 52 52 52 SER SER K . n E 3 53 TRP 53 53 53 TRP TRP K . n E 3 54 ASN 54 54 54 ASN ASN K . n E 3 55 SER 55 55 55 SER SER K . n E 3 56 ASP 56 56 56 ASP ASP K . n E 3 57 SER 57 57 57 SER SER K . n E 3 58 ILE 58 58 58 ILE ILE K . n E 3 59 ASP 59 59 59 ASP ASP K . n E 3 60 TYR 60 60 60 TYR TYR K . n E 3 61 ALA 61 61 61 ALA ALA K . n E 3 62 ASP 62 62 62 ASP ASP K . n E 3 63 SER 63 63 63 SER SER K . n E 3 64 VAL 64 64 64 VAL VAL K . n E 3 65 LYS 65 65 65 LYS LYS K . n E 3 66 GLY 66 66 66 GLY GLY K . n E 3 67 ARG 67 67 67 ARG ARG K . n E 3 68 PHE 68 68 68 PHE PHE K . n E 3 69 THR 69 69 69 THR THR K . n E 3 70 ILE 70 70 70 ILE ILE K . n E 3 71 SER 71 71 71 SER SER K . n E 3 72 ARG 72 72 72 ARG ARG K . n E 3 73 ASP 73 73 73 ASP ASP K . n E 3 74 ASN 74 74 74 ASN ASN K . n E 3 75 ALA 75 75 75 ALA ALA K . n E 3 76 LYS 76 76 76 LYS LYS K . n E 3 77 ASN 77 77 77 ASN ASN K . n E 3 78 SER 78 78 78 SER SER K . n E 3 79 LEU 79 79 79 LEU LEU K . n E 3 80 TYR 80 80 80 TYR TYR K . n E 3 81 LEU 81 81 81 LEU LEU K . n E 3 82 GLN 82 82 82 GLN GLN K . n E 3 83 MET 83 83 83 MET MET K . n E 3 84 ASN 84 84 84 ASN ASN K . n E 3 85 SER 85 85 85 SER SER K . n E 3 86 LEU 86 86 86 LEU LEU K . n E 3 87 ARG 87 87 87 ARG ARG K . n E 3 88 ALA 88 88 88 ALA ALA K . n E 3 89 GLU 89 89 89 GLU GLU K . n E 3 90 ASP 90 90 90 ASP ASP K . n E 3 91 THR 91 91 91 THR THR K . n E 3 92 ALA 92 92 92 ALA ALA K . n E 3 93 LEU 93 93 93 LEU LEU K . n E 3 94 TYR 94 94 94 TYR TYR K . n E 3 95 TYR 95 95 95 TYR TYR K . n E 3 96 CYS 96 96 96 CYS CYS K . n E 3 97 ALA 97 97 97 ALA ALA K . n E 3 98 LYS 98 98 98 LYS LYS K . n E 3 99 ASP 99 99 99 ASP ASP K . n E 3 100 ARG 100 100 100 ARG ARG K . n E 3 101 GLY 101 101 101 GLY GLY K . n E 3 102 TYR 102 102 102 TYR TYR K . n E 3 103 GLU 103 103 103 GLU GLU K . n E 3 104 ILE 104 104 104 ILE ILE K . n E 3 105 LEU 105 105 105 LEU LEU K . n E 3 106 THR 106 106 106 THR THR K . n E 3 107 PRO 107 107 107 PRO PRO K . n E 3 108 ALA 108 108 108 ALA ALA K . n E 3 109 SER 109 109 109 SER SER K . n E 3 110 PHE 110 110 110 PHE PHE K . n E 3 111 ASP 111 111 111 ASP ASP K . n E 3 112 TYR 112 112 112 TYR TYR K . n E 3 113 TRP 113 113 113 TRP TRP K . n E 3 114 GLY 114 114 114 GLY GLY K . n E 3 115 GLN 115 115 115 GLN GLN K . n E 3 116 GLY 116 116 116 GLY GLY K . n E 3 117 THR 117 117 117 THR THR K . n E 3 118 LEU 118 118 118 LEU LEU K . n E 3 119 VAL 119 119 119 VAL VAL K . n E 3 120 THR 120 120 120 THR THR K . n E 3 121 VAL 121 121 121 VAL VAL K . n E 3 122 SER 122 122 122 SER SER K . n E 3 123 SER 123 123 123 SER SER K . n E 3 124 ALA 124 124 124 ALA ALA K . n E 3 125 SER 125 125 125 SER SER K . n # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 3 yanght@shanghaitech.edu.cn Haitao Yang ? 'principal investigator/group leader' 0000-0002-1875-3268 4 xiaoyun.ji@nju.edu.cn Xiaoyun Ji ? 'principal investigator/group leader' 0000-0002-0801-8825 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2022-06-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name PHENIX _software.os ? _software.os_version ? _software.type ? _software.version 1.19.2_4158: _software.pdbx_ordinal 1 # _pdbx_entry_details.entry_id 7WS7 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _em_3d_fitting.entry_id 7WS7 _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol ? _em_3d_fitting.ref_space ? _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 7WS7 _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 143888 _em_3d_reconstruction.resolution 3.4 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 7.4 _em_buffer.specimen_id 1 _em_buffer.name ? # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.details _em_entity_assembly.name _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.entity_id_list _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details 1 0 ? 'SARS-CoV-2 Spike RBD complex with 510A5 Fab local refine' 'MULTIPLE SOURCES' COMPLEX '1, 2, 3' ? ? 2 1 'SARS-CoV-2 Spike protein RBD' 'spike glycoprotein RBD' RECOMBINANT COMPLEX 1 ? ? 3 1 'Fab fragment generated by proteolytic cleavage of IgG antibody' Fab RECOMBINANT COMPLEX '2, 3' ? ? # _em_imaging.id 1 _em_imaging.entry_id 7WS7 _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen ? _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'SPOT SCAN' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max 2800 _em_imaging.nominal_defocus_min 1200 _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature ? _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity ? _em_vitrification.instrument ? _em_vitrification.entry_id 7WS7 _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 7WS7 _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OD1 B ASN 343 ? ? O7 O NAG 1 ? ? 1.82 2 1 ND2 B ASN 343 ? ? O5 O NAG 1 ? ? 2.13 3 1 OH F TYR 97 ? ? O G ILE 104 ? ? 2.13 4 1 OD1 B ASP 420 ? ? ND2 B ASN 460 ? ? 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP B 428 ? ? -96.43 33.85 2 1 TYR F 32 ? ? -109.90 78.58 3 1 SER F 52 ? ? -140.36 40.29 4 1 ASP F 82 ? ? -99.32 35.46 5 1 ALA F 84 ? ? -171.48 -174.71 6 1 VAL G 48 ? ? -124.62 -54.09 7 1 THR G 91 ? ? -97.19 33.29 8 1 TYR J 32 ? ? -103.30 77.51 9 1 SER J 52 ? ? -140.67 30.63 10 1 ARG K 67 ? ? -131.99 -31.08 11 1 SER K 122 ? ? -171.61 -172.53 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B HIS 519 ? CG ? A HIS 194 CG 2 1 Y 1 B HIS 519 ? ND1 ? A HIS 194 ND1 3 1 Y 1 B HIS 519 ? CD2 ? A HIS 194 CD2 4 1 Y 1 B HIS 519 ? CE1 ? A HIS 194 CE1 5 1 Y 1 B HIS 519 ? NE2 ? A HIS 194 NE2 6 1 Y 1 B LYS 528 ? CG ? A LYS 203 CG 7 1 Y 1 B LYS 528 ? CD ? A LYS 203 CD 8 1 Y 1 B LYS 528 ? CE ? A LYS 203 CE 9 1 Y 1 B LYS 528 ? NZ ? A LYS 203 NZ 10 1 Y 1 B LYS 529 ? CG ? A LYS 204 CG 11 1 Y 1 B LYS 529 ? CD ? A LYS 204 CD 12 1 Y 1 B LYS 529 ? CE ? A LYS 204 CE 13 1 Y 1 B LYS 529 ? NZ ? A LYS 204 NZ 14 1 Y 1 B SER 530 ? OG ? A SER 205 OG 15 1 Y 1 F LYS 108 ? CG ? B LYS 108 CG 16 1 Y 1 F LYS 108 ? CD ? B LYS 108 CD 17 1 Y 1 F LYS 108 ? CE ? B LYS 108 CE 18 1 Y 1 F LYS 108 ? NZ ? B LYS 108 NZ 19 1 Y 1 J LYS 108 ? CG ? D LYS 108 CG 20 1 Y 1 J LYS 108 ? CD ? D LYS 108 CD 21 1 Y 1 J LYS 108 ? CE ? D LYS 108 CE 22 1 Y 1 J LYS 108 ? NZ ? D LYS 108 NZ # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # loop_ _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue 2 1 ? ? 2697049 ? ? 'Severe acute respiratory syndrome coronavirus 2' ? ? 3 2 ? ? 9606 ? ? 'Homo sapiens' ? ? # loop_ _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain 2 1 HEK293 9606 'Homo sapiens' ? ? 3 2 HEK293 9606 'Homo sapiens' ? ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 60 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? _em_image_recording.avg_electron_dose_per_subtomogram ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'CRYSTALLOGRAPHY MERGING' ? ? ? 1 1 1 2 'IMAGE ACQUISITION' ? ? ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? ? ? 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? ? ? ? ? ? 8 'MODEL REFINEMENT' ? ? ? ? ? ? 9 OTHER ? ? ? ? ? ? 10 'INITIAL EULER ASSIGNMENT' ? ? ? 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? ? ? 1 ? ? 12 CLASSIFICATION ? ? ? 1 ? ? 13 RECONSTRUCTION ? ? ? 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Other government' _pdbx_audit_support.country China _pdbx_audit_support.grant_number YDZX20213100001556 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero F 4 NAG 1 O NAG 1 O NAG 19 n F 4 NAG 2 O NAG 2 O NAG 20 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 4 DGlcpNAcb1-4DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 4 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 3 4 '[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 4 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 4 NAG 1 n 4 NAG 2 n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id NAG _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id NAG _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details ? #