data_7WSC # _entry.id 7WSC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7WSC pdb_00007wsc 10.2210/pdb7wsc/pdb WWPDB D_1300027315 ? ? EMDB EMD-32753 ? ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'local structure of BD55-3500 and omicron RBD complex' _pdbx_database_related.db_id EMD-32753 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7WSC _pdbx_database_status.recvd_initial_deposition_date 2022-01-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _audit_author.name 'Liu, P.L.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Local structure of BD55-3500 and omicron RBD complex' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # _citation_author.citation_id primary _citation_author.name 'Liu, P.L.' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7WSC _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WSC _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Spike protein S1' 26878.420 1 ? ? RBD ? 2 polymer man 3500H 14476.138 1 ? ? ? ? 3 polymer man 3500L 11589.000 1 ? ? ? ? 4 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;AAGSARVQPTESIVRFPNITNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFT NVYADSFVIRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIY QAGNKPCNGVAGFNCYFPLRSYSFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFHHHHHHHH ; ;AAGSARVQPTESIVRFPNITNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFT NVYADSFVIRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIY QAGNKPCNGVAGFNCYFPLRSYSFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFHHHHHHHH ; R ? 2 'polypeptide(L)' no no ;QVQLVESGGGVVQPGRSLRLSCAASGFIFSRYDIHWVRQTPGKGLEWVALIRYDGSDKYYADSVKGRFTISRDNSKNTLY LQMNSLRVEDTAVYYCAKEGIQGYSGYDYFWTGFYFDYWGQGTLVTV ; ;QVQLVESGGGVVQPGRSLRLSCAASGFIFSRYDIHWVRQTPGKGLEWVALIRYDGSDKYYADSVKGRFTISRDNSKNTLY LQMNSLRVEDTAVYYCAKEGIQGYSGYDYFWTGFYFDYWGQGTLVTV ; H ? 3 'polypeptide(L)' no no ;VVMTQSPLSLPVTPGEPASISCRSSQSLLQSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKIS RVEAEDVGIYYCMQALQTPLTFGGGTKV ; ;VVMTQSPLSLPVTPGEPASISCRSSQSLLQSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKIS RVEAEDVGIYYCMQALQTPLTFGGGTKV ; L ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ALA n 1 3 GLY n 1 4 SER n 1 5 ALA n 1 6 ARG n 1 7 VAL n 1 8 GLN n 1 9 PRO n 1 10 THR n 1 11 GLU n 1 12 SER n 1 13 ILE n 1 14 VAL n 1 15 ARG n 1 16 PHE n 1 17 PRO n 1 18 ASN n 1 19 ILE n 1 20 THR n 1 21 ASN n 1 22 LEU n 1 23 CYS n 1 24 PRO n 1 25 PHE n 1 26 ASP n 1 27 GLU n 1 28 VAL n 1 29 PHE n 1 30 ASN n 1 31 ALA n 1 32 THR n 1 33 ARG n 1 34 PHE n 1 35 ALA n 1 36 SER n 1 37 VAL n 1 38 TYR n 1 39 ALA n 1 40 TRP n 1 41 ASN n 1 42 ARG n 1 43 LYS n 1 44 ARG n 1 45 ILE n 1 46 SER n 1 47 ASN n 1 48 CYS n 1 49 VAL n 1 50 ALA n 1 51 ASP n 1 52 TYR n 1 53 SER n 1 54 VAL n 1 55 LEU n 1 56 TYR n 1 57 ASN n 1 58 LEU n 1 59 ALA n 1 60 PRO n 1 61 PHE n 1 62 PHE n 1 63 THR n 1 64 PHE n 1 65 LYS n 1 66 CYS n 1 67 TYR n 1 68 GLY n 1 69 VAL n 1 70 SER n 1 71 PRO n 1 72 THR n 1 73 LYS n 1 74 LEU n 1 75 ASN n 1 76 ASP n 1 77 LEU n 1 78 CYS n 1 79 PHE n 1 80 THR n 1 81 ASN n 1 82 VAL n 1 83 TYR n 1 84 ALA n 1 85 ASP n 1 86 SER n 1 87 PHE n 1 88 VAL n 1 89 ILE n 1 90 ARG n 1 91 GLY n 1 92 ASP n 1 93 GLU n 1 94 VAL n 1 95 ARG n 1 96 GLN n 1 97 ILE n 1 98 ALA n 1 99 PRO n 1 100 GLY n 1 101 GLN n 1 102 THR n 1 103 GLY n 1 104 ASN n 1 105 ILE n 1 106 ALA n 1 107 ASP n 1 108 TYR n 1 109 ASN n 1 110 TYR n 1 111 LYS n 1 112 LEU n 1 113 PRO n 1 114 ASP n 1 115 ASP n 1 116 PHE n 1 117 THR n 1 118 GLY n 1 119 CYS n 1 120 VAL n 1 121 ILE n 1 122 ALA n 1 123 TRP n 1 124 ASN n 1 125 SER n 1 126 ASN n 1 127 LYS n 1 128 LEU n 1 129 ASP n 1 130 SER n 1 131 LYS n 1 132 VAL n 1 133 SER n 1 134 GLY n 1 135 ASN n 1 136 TYR n 1 137 ASN n 1 138 TYR n 1 139 LEU n 1 140 TYR n 1 141 ARG n 1 142 LEU n 1 143 PHE n 1 144 ARG n 1 145 LYS n 1 146 SER n 1 147 ASN n 1 148 LEU n 1 149 LYS n 1 150 PRO n 1 151 PHE n 1 152 GLU n 1 153 ARG n 1 154 ASP n 1 155 ILE n 1 156 SER n 1 157 THR n 1 158 GLU n 1 159 ILE n 1 160 TYR n 1 161 GLN n 1 162 ALA n 1 163 GLY n 1 164 ASN n 1 165 LYS n 1 166 PRO n 1 167 CYS n 1 168 ASN n 1 169 GLY n 1 170 VAL n 1 171 ALA n 1 172 GLY n 1 173 PHE n 1 174 ASN n 1 175 CYS n 1 176 TYR n 1 177 PHE n 1 178 PRO n 1 179 LEU n 1 180 ARG n 1 181 SER n 1 182 TYR n 1 183 SER n 1 184 PHE n 1 185 ARG n 1 186 PRO n 1 187 THR n 1 188 TYR n 1 189 GLY n 1 190 VAL n 1 191 GLY n 1 192 HIS n 1 193 GLN n 1 194 PRO n 1 195 TYR n 1 196 ARG n 1 197 VAL n 1 198 VAL n 1 199 VAL n 1 200 LEU n 1 201 SER n 1 202 PHE n 1 203 GLU n 1 204 LEU n 1 205 LEU n 1 206 HIS n 1 207 ALA n 1 208 PRO n 1 209 ALA n 1 210 THR n 1 211 VAL n 1 212 CYS n 1 213 GLY n 1 214 PRO n 1 215 LYS n 1 216 LYS n 1 217 SER n 1 218 THR n 1 219 ASN n 1 220 LEU n 1 221 VAL n 1 222 LYS n 1 223 ASN n 1 224 LYS n 1 225 CYS n 1 226 VAL n 1 227 ASN n 1 228 PHE n 1 229 HIS n 1 230 HIS n 1 231 HIS n 1 232 HIS n 1 233 HIS n 1 234 HIS n 1 235 HIS n 1 236 HIS n 2 1 GLN n 2 2 VAL n 2 3 GLN n 2 4 LEU n 2 5 VAL n 2 6 GLU n 2 7 SER n 2 8 GLY n 2 9 GLY n 2 10 GLY n 2 11 VAL n 2 12 VAL n 2 13 GLN n 2 14 PRO n 2 15 GLY n 2 16 ARG n 2 17 SER n 2 18 LEU n 2 19 ARG n 2 20 LEU n 2 21 SER n 2 22 CYS n 2 23 ALA n 2 24 ALA n 2 25 SER n 2 26 GLY n 2 27 PHE n 2 28 ILE n 2 29 PHE n 2 30 SER n 2 31 ARG n 2 32 TYR n 2 33 ASP n 2 34 ILE n 2 35 HIS n 2 36 TRP n 2 37 VAL n 2 38 ARG n 2 39 GLN n 2 40 THR n 2 41 PRO n 2 42 GLY n 2 43 LYS n 2 44 GLY n 2 45 LEU n 2 46 GLU n 2 47 TRP n 2 48 VAL n 2 49 ALA n 2 50 LEU n 2 51 ILE n 2 52 ARG n 2 53 TYR n 2 54 ASP n 2 55 GLY n 2 56 SER n 2 57 ASP n 2 58 LYS n 2 59 TYR n 2 60 TYR n 2 61 ALA n 2 62 ASP n 2 63 SER n 2 64 VAL n 2 65 LYS n 2 66 GLY n 2 67 ARG n 2 68 PHE n 2 69 THR n 2 70 ILE n 2 71 SER n 2 72 ARG n 2 73 ASP n 2 74 ASN n 2 75 SER n 2 76 LYS n 2 77 ASN n 2 78 THR n 2 79 LEU n 2 80 TYR n 2 81 LEU n 2 82 GLN n 2 83 MET n 2 84 ASN n 2 85 SER n 2 86 LEU n 2 87 ARG n 2 88 VAL n 2 89 GLU n 2 90 ASP n 2 91 THR n 2 92 ALA n 2 93 VAL n 2 94 TYR n 2 95 TYR n 2 96 CYS n 2 97 ALA n 2 98 LYS n 2 99 GLU n 2 100 GLY n 2 101 ILE n 2 102 GLN n 2 103 GLY n 2 104 TYR n 2 105 SER n 2 106 GLY n 2 107 TYR n 2 108 ASP n 2 109 TYR n 2 110 PHE n 2 111 TRP n 2 112 THR n 2 113 GLY n 2 114 PHE n 2 115 TYR n 2 116 PHE n 2 117 ASP n 2 118 TYR n 2 119 TRP n 2 120 GLY n 2 121 GLN n 2 122 GLY n 2 123 THR n 2 124 LEU n 2 125 VAL n 2 126 THR n 2 127 VAL n 3 1 VAL n 3 2 VAL n 3 3 MET n 3 4 THR n 3 5 GLN n 3 6 SER n 3 7 PRO n 3 8 LEU n 3 9 SER n 3 10 LEU n 3 11 PRO n 3 12 VAL n 3 13 THR n 3 14 PRO n 3 15 GLY n 3 16 GLU n 3 17 PRO n 3 18 ALA n 3 19 SER n 3 20 ILE n 3 21 SER n 3 22 CYS n 3 23 ARG n 3 24 SER n 3 25 SER n 3 26 GLN n 3 27 SER n 3 28 LEU n 3 29 LEU n 3 30 GLN n 3 31 SER n 3 32 ASN n 3 33 GLY n 3 34 TYR n 3 35 ASN n 3 36 TYR n 3 37 LEU n 3 38 ASP n 3 39 TRP n 3 40 TYR n 3 41 LEU n 3 42 GLN n 3 43 LYS n 3 44 PRO n 3 45 GLY n 3 46 GLN n 3 47 SER n 3 48 PRO n 3 49 GLN n 3 50 LEU n 3 51 LEU n 3 52 ILE n 3 53 TYR n 3 54 LEU n 3 55 GLY n 3 56 SER n 3 57 ASN n 3 58 ARG n 3 59 ALA n 3 60 SER n 3 61 GLY n 3 62 VAL n 3 63 PRO n 3 64 ASP n 3 65 ARG n 3 66 PHE n 3 67 SER n 3 68 GLY n 3 69 SER n 3 70 GLY n 3 71 SER n 3 72 GLY n 3 73 THR n 3 74 ASP n 3 75 PHE n 3 76 THR n 3 77 LEU n 3 78 LYS n 3 79 ILE n 3 80 SER n 3 81 ARG n 3 82 VAL n 3 83 GLU n 3 84 ALA n 3 85 GLU n 3 86 ASP n 3 87 VAL n 3 88 GLY n 3 89 ILE n 3 90 TYR n 3 91 TYR n 3 92 CYS n 3 93 MET n 3 94 GLN n 3 95 ALA n 3 96 LEU n 3 97 GLN n 3 98 THR n 3 99 PRO n 3 100 LEU n 3 101 THR n 3 102 PHE n 3 103 GLY n 3 104 GLY n 3 105 GLY n 3 106 THR n 3 107 LYS n 3 108 VAL n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 236 2019-nCoV,SARS-CoV-2 ? 'S, 2' ? ? ? ? ? ? 'Severe acute respiratory syndrome coronavirus' 2901879 omicron ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 127 human ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 108 human ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP SPIKE_SARS2 P0DTC2 ? 1 ;RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYAD SFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGST PCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNF ; 319 2 PDB 7WSC 7WSC ? 2 ? 1 3 PDB 7WSC 7WSC ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7WSC R 6 ? 228 ? P0DTC2 319 ? 541 ? 319 541 2 2 7WSC H 1 ? 127 ? 7WSC 20 ? 146 ? 20 146 3 3 7WSC L 1 ? 108 ? 7WSC 21 ? 128 ? 21 128 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7WSC ALA R 1 ? UNP P0DTC2 ? ? 'expression tag' 314 1 1 7WSC ALA R 2 ? UNP P0DTC2 ? ? 'expression tag' 315 2 1 7WSC GLY R 3 ? UNP P0DTC2 ? ? 'expression tag' 316 3 1 7WSC SER R 4 ? UNP P0DTC2 ? ? 'expression tag' 317 4 1 7WSC ALA R 5 ? UNP P0DTC2 ? ? 'expression tag' 318 5 1 7WSC ASP R 26 ? UNP P0DTC2 GLY 339 variant 339 6 1 7WSC LEU R 58 ? UNP P0DTC2 SER 371 variant 371 7 1 7WSC PRO R 60 ? UNP P0DTC2 SER 373 variant 373 8 1 7WSC PHE R 62 ? UNP P0DTC2 SER 375 variant 375 9 1 7WSC ASN R 104 ? UNP P0DTC2 LYS 417 variant 417 10 1 7WSC LYS R 127 ? UNP P0DTC2 ASN 440 variant 440 11 1 7WSC SER R 133 ? UNP P0DTC2 GLY 446 variant 446 12 1 7WSC ASN R 164 ? UNP P0DTC2 SER 477 variant 477 13 1 7WSC LYS R 165 ? UNP P0DTC2 THR 478 variant 478 14 1 7WSC ALA R 171 ? UNP P0DTC2 GLU 484 variant 484 15 1 7WSC ARG R 180 ? UNP P0DTC2 GLN 493 variant 493 16 1 7WSC SER R 183 ? UNP P0DTC2 GLY 496 variant 496 17 1 7WSC ARG R 185 ? UNP P0DTC2 GLN 498 variant 498 18 1 7WSC TYR R 188 ? UNP P0DTC2 ASN 501 variant 501 19 1 7WSC HIS R 192 ? UNP P0DTC2 TYR 505 variant 505 20 1 7WSC HIS R 229 ? UNP P0DTC2 ? ? 'expression tag' 542 21 1 7WSC HIS R 230 ? UNP P0DTC2 ? ? 'expression tag' 543 22 1 7WSC HIS R 231 ? UNP P0DTC2 ? ? 'expression tag' 544 23 1 7WSC HIS R 232 ? UNP P0DTC2 ? ? 'expression tag' 545 24 1 7WSC HIS R 233 ? UNP P0DTC2 ? ? 'expression tag' 546 25 1 7WSC HIS R 234 ? UNP P0DTC2 ? ? 'expression tag' 547 26 1 7WSC HIS R 235 ? UNP P0DTC2 ? ? 'expression tag' 548 27 1 7WSC HIS R 236 ? UNP P0DTC2 ? ? 'expression tag' 549 28 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7WSC _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 7WSC _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.006 ? 3470 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.895 ? 4710 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 17.457 ? 494 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.052 ? 506 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.007 ? 604 ? f_plane_restr ? ? # _struct.entry_id 7WSC _struct.title 'Local structure of BD55-3500 and omicron RBD complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7WSC _struct_keywords.text 'sars-cov-2, antibody, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PHE A 25 ? ALA A 31 ? PHE R 338 ALA R 344 1 ? 7 HELX_P HELX_P2 AA2 ASP A 51 ? TYR A 56 ? ASP R 364 TYR R 369 5 ? 6 HELX_P HELX_P3 AA3 SER A 70 ? ASN A 75 ? SER R 383 ASN R 388 1 ? 6 HELX_P HELX_P4 AA4 ASP A 92 ? VAL A 94 ? ASP R 405 VAL R 407 5 ? 3 HELX_P HELX_P5 AA5 GLY A 103 ? ASN A 109 ? GLY R 416 ASN R 422 1 ? 7 HELX_P HELX_P6 AA6 ARG B 87 ? THR B 91 ? ARG H 106 THR H 110 5 ? 5 HELX_P HELX_P7 AA7 GLU C 83 ? VAL C 87 ? GLU L 103 VAL L 107 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 48 SG ? ? R CYS 336 R CYS 361 1_555 ? ? ? ? ? ? ? 2.021 ? ? disulf2 disulf ? ? A CYS 66 SG ? ? ? 1_555 A CYS 119 SG ? ? R CYS 379 R CYS 432 1_555 ? ? ? ? ? ? ? 2.006 ? ? disulf3 disulf ? ? A CYS 78 SG ? ? ? 1_555 A CYS 212 SG ? ? R CYS 391 R CYS 525 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf4 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 96 SG ? ? H CYS 41 H CYS 115 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf5 disulf ? ? C CYS 22 SG ? ? ? 1_555 C CYS 92 SG ? ? L CYS 42 L CYS 112 1_555 ? ? ? ? ? ? ? 2.031 ? ? covale1 covale one ? A ASN 30 ND2 ? ? ? 1_555 D NAG . C1 ? ? R ASN 343 A NAG 1 1_555 ? ? ? ? ? ? ? 1.442 ? N-Glycosylation covale2 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? A NAG 1 A NAG 2 1_555 ? ? ? ? ? ? ? 1.447 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 6 C . ? SER 26 L PRO 7 C ? PRO 27 L 1 -9.82 2 THR 98 C . ? THR 118 L PRO 99 C ? PRO 119 L 1 -1.90 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 2 ? AA3 ? 4 ? AA4 ? 4 ? AA5 ? 4 ? AA6 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASN A 41 ? ILE A 45 ? ASN R 354 ILE R 358 AA1 2 VAL A 82 ? ARG A 90 ? VAL R 395 ARG R 403 AA1 3 PRO A 194 ? SER A 201 ? PRO R 507 SER R 514 AA1 4 CYS A 119 ? ASN A 124 ? CYS R 432 ASN R 437 AA2 1 LEU A 139 ? TYR A 140 ? LEU R 452 TYR R 453 AA2 2 ARG A 180 ? SER A 181 ? ARG R 493 SER R 494 AA3 1 GLN B 3 ? SER B 7 ? GLN H 22 SER H 26 AA3 2 LEU B 18 ? SER B 25 ? LEU H 37 SER H 44 AA3 3 THR B 78 ? MET B 83 ? THR H 97 MET H 102 AA3 4 PHE B 68 ? ASP B 73 ? PHE H 87 ASP H 92 AA4 1 GLU B 46 ? ILE B 51 ? GLU H 65 ILE H 70 AA4 2 ILE B 34 ? GLN B 39 ? ILE H 53 GLN H 58 AA4 3 ALA B 92 ? LYS B 98 ? ALA H 111 LYS H 117 AA4 4 LEU B 124 ? VAL B 125 ? LEU H 143 VAL H 144 AA5 1 THR C 4 ? SER C 6 ? THR L 24 SER L 26 AA5 2 ALA C 18 ? ARG C 23 ? ALA L 38 ARG L 43 AA5 3 ASP C 74 ? ILE C 79 ? ASP L 94 ILE L 99 AA5 4 PHE C 66 ? SER C 69 ? PHE L 86 SER L 89 AA6 1 GLN C 49 ? LEU C 50 ? GLN L 69 LEU L 70 AA6 2 LEU C 37 ? GLN C 42 ? LEU L 57 GLN L 62 AA6 3 ILE C 89 ? GLN C 94 ? ILE L 109 GLN L 114 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 45 ? N ILE R 358 O VAL A 82 ? O VAL R 395 AA1 2 3 N ILE A 89 ? N ILE R 402 O TYR A 195 ? O TYR R 508 AA1 3 4 O VAL A 198 ? O VAL R 511 N ILE A 121 ? N ILE R 434 AA2 1 2 N TYR A 140 ? N TYR R 453 O ARG A 180 ? O ARG R 493 AA3 1 2 N SER B 7 ? N SER H 26 O SER B 21 ? O SER H 40 AA3 2 3 N LEU B 20 ? N LEU H 39 O LEU B 81 ? O LEU H 100 AA3 3 4 O GLN B 82 ? O GLN H 101 N THR B 69 ? N THR H 88 AA4 1 2 O GLU B 46 ? O GLU H 65 N ARG B 38 ? N ARG H 57 AA4 2 3 N VAL B 37 ? N VAL H 56 O TYR B 95 ? O TYR H 114 AA4 3 4 N ALA B 92 ? N ALA H 111 O VAL B 125 ? O VAL H 144 AA5 1 2 N SER C 6 ? N SER L 26 O SER C 21 ? O SER L 41 AA5 2 3 N ILE C 20 ? N ILE L 40 O LEU C 77 ? O LEU L 97 AA5 3 4 O LYS C 78 ? O LYS L 98 N SER C 67 ? N SER L 87 AA6 1 2 O GLN C 49 ? O GLN L 69 N LEU C 41 ? N LEU L 61 AA6 2 3 N ASP C 38 ? N ASP L 58 O MET C 93 ? O MET L 113 # _atom_sites.entry_id 7WSC _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 314 ? ? ? R . n A 1 2 ALA 2 315 ? ? ? R . n A 1 3 GLY 3 316 ? ? ? R . n A 1 4 SER 4 317 ? ? ? R . n A 1 5 ALA 5 318 ? ? ? R . n A 1 6 ARG 6 319 ? ? ? R . n A 1 7 VAL 7 320 ? ? ? R . n A 1 8 GLN 8 321 ? ? ? R . n A 1 9 PRO 9 322 ? ? ? R . n A 1 10 THR 10 323 ? ? ? R . n A 1 11 GLU 11 324 ? ? ? R . n A 1 12 SER 12 325 ? ? ? R . n A 1 13 ILE 13 326 ? ? ? R . n A 1 14 VAL 14 327 ? ? ? R . n A 1 15 ARG 15 328 ? ? ? R . n A 1 16 PHE 16 329 ? ? ? R . n A 1 17 PRO 17 330 ? ? ? R . n A 1 18 ASN 18 331 ? ? ? R . n A 1 19 ILE 19 332 ? ? ? R . n A 1 20 THR 20 333 ? ? ? R . n A 1 21 ASN 21 334 334 ASN ASN R . n A 1 22 LEU 22 335 335 LEU LEU R . n A 1 23 CYS 23 336 336 CYS CYS R . n A 1 24 PRO 24 337 337 PRO PRO R . n A 1 25 PHE 25 338 338 PHE PHE R . n A 1 26 ASP 26 339 339 ASP ASP R . n A 1 27 GLU 27 340 340 GLU GLU R . n A 1 28 VAL 28 341 341 VAL VAL R . n A 1 29 PHE 29 342 342 PHE PHE R . n A 1 30 ASN 30 343 343 ASN ASN R . n A 1 31 ALA 31 344 344 ALA ALA R . n A 1 32 THR 32 345 345 THR THR R . n A 1 33 ARG 33 346 346 ARG ARG R . n A 1 34 PHE 34 347 347 PHE PHE R . n A 1 35 ALA 35 348 348 ALA ALA R . n A 1 36 SER 36 349 349 SER SER R . n A 1 37 VAL 37 350 350 VAL VAL R . n A 1 38 TYR 38 351 351 TYR TYR R . n A 1 39 ALA 39 352 352 ALA ALA R . n A 1 40 TRP 40 353 353 TRP TRP R . n A 1 41 ASN 41 354 354 ASN ASN R . n A 1 42 ARG 42 355 355 ARG ARG R . n A 1 43 LYS 43 356 356 LYS LYS R . n A 1 44 ARG 44 357 357 ARG ARG R . n A 1 45 ILE 45 358 358 ILE ILE R . n A 1 46 SER 46 359 359 SER SER R . n A 1 47 ASN 47 360 360 ASN ASN R . n A 1 48 CYS 48 361 361 CYS CYS R . n A 1 49 VAL 49 362 362 VAL VAL R . n A 1 50 ALA 50 363 363 ALA ALA R . n A 1 51 ASP 51 364 364 ASP ASP R . n A 1 52 TYR 52 365 365 TYR TYR R . n A 1 53 SER 53 366 366 SER SER R . n A 1 54 VAL 54 367 367 VAL VAL R . n A 1 55 LEU 55 368 368 LEU LEU R . n A 1 56 TYR 56 369 369 TYR TYR R . n A 1 57 ASN 57 370 370 ASN ASN R . n A 1 58 LEU 58 371 371 LEU LEU R . n A 1 59 ALA 59 372 372 ALA ALA R . n A 1 60 PRO 60 373 373 PRO PRO R . n A 1 61 PHE 61 374 374 PHE PHE R . n A 1 62 PHE 62 375 375 PHE PHE R . n A 1 63 THR 63 376 376 THR THR R . n A 1 64 PHE 64 377 377 PHE PHE R . n A 1 65 LYS 65 378 378 LYS LYS R . n A 1 66 CYS 66 379 379 CYS CYS R . n A 1 67 TYR 67 380 380 TYR TYR R . n A 1 68 GLY 68 381 381 GLY GLY R . n A 1 69 VAL 69 382 382 VAL VAL R . n A 1 70 SER 70 383 383 SER SER R . n A 1 71 PRO 71 384 384 PRO PRO R . n A 1 72 THR 72 385 385 THR THR R . n A 1 73 LYS 73 386 386 LYS LYS R . n A 1 74 LEU 74 387 387 LEU LEU R . n A 1 75 ASN 75 388 388 ASN ASN R . n A 1 76 ASP 76 389 389 ASP ASP R . n A 1 77 LEU 77 390 390 LEU LEU R . n A 1 78 CYS 78 391 391 CYS CYS R . n A 1 79 PHE 79 392 392 PHE PHE R . n A 1 80 THR 80 393 393 THR THR R . n A 1 81 ASN 81 394 394 ASN ASN R . n A 1 82 VAL 82 395 395 VAL VAL R . n A 1 83 TYR 83 396 396 TYR TYR R . n A 1 84 ALA 84 397 397 ALA ALA R . n A 1 85 ASP 85 398 398 ASP ASP R . n A 1 86 SER 86 399 399 SER SER R . n A 1 87 PHE 87 400 400 PHE PHE R . n A 1 88 VAL 88 401 401 VAL VAL R . n A 1 89 ILE 89 402 402 ILE ILE R . n A 1 90 ARG 90 403 403 ARG ARG R . n A 1 91 GLY 91 404 404 GLY GLY R . n A 1 92 ASP 92 405 405 ASP ASP R . n A 1 93 GLU 93 406 406 GLU GLU R . n A 1 94 VAL 94 407 407 VAL VAL R . n A 1 95 ARG 95 408 408 ARG ARG R . n A 1 96 GLN 96 409 409 GLN GLN R . n A 1 97 ILE 97 410 410 ILE ILE R . n A 1 98 ALA 98 411 411 ALA ALA R . n A 1 99 PRO 99 412 412 PRO PRO R . n A 1 100 GLY 100 413 413 GLY GLY R . n A 1 101 GLN 101 414 414 GLN GLN R . n A 1 102 THR 102 415 415 THR THR R . n A 1 103 GLY 103 416 416 GLY GLY R . n A 1 104 ASN 104 417 417 ASN ASN R . n A 1 105 ILE 105 418 418 ILE ILE R . n A 1 106 ALA 106 419 419 ALA ALA R . n A 1 107 ASP 107 420 420 ASP ASP R . n A 1 108 TYR 108 421 421 TYR TYR R . n A 1 109 ASN 109 422 422 ASN ASN R . n A 1 110 TYR 110 423 423 TYR TYR R . n A 1 111 LYS 111 424 424 LYS LYS R . n A 1 112 LEU 112 425 425 LEU LEU R . n A 1 113 PRO 113 426 426 PRO PRO R . n A 1 114 ASP 114 427 427 ASP ASP R . n A 1 115 ASP 115 428 428 ASP ASP R . n A 1 116 PHE 116 429 429 PHE PHE R . n A 1 117 THR 117 430 430 THR THR R . n A 1 118 GLY 118 431 431 GLY GLY R . n A 1 119 CYS 119 432 432 CYS CYS R . n A 1 120 VAL 120 433 433 VAL VAL R . n A 1 121 ILE 121 434 434 ILE ILE R . n A 1 122 ALA 122 435 435 ALA ALA R . n A 1 123 TRP 123 436 436 TRP TRP R . n A 1 124 ASN 124 437 437 ASN ASN R . n A 1 125 SER 125 438 438 SER SER R . n A 1 126 ASN 126 439 439 ASN ASN R . n A 1 127 LYS 127 440 440 LYS LYS R . n A 1 128 LEU 128 441 441 LEU LEU R . n A 1 129 ASP 129 442 442 ASP ASP R . n A 1 130 SER 130 443 443 SER SER R . n A 1 131 LYS 131 444 444 LYS LYS R . n A 1 132 VAL 132 445 445 VAL VAL R . n A 1 133 SER 133 446 446 SER SER R . n A 1 134 GLY 134 447 447 GLY GLY R . n A 1 135 ASN 135 448 448 ASN ASN R . n A 1 136 TYR 136 449 449 TYR TYR R . n A 1 137 ASN 137 450 450 ASN ASN R . n A 1 138 TYR 138 451 451 TYR TYR R . n A 1 139 LEU 139 452 452 LEU LEU R . n A 1 140 TYR 140 453 453 TYR TYR R . n A 1 141 ARG 141 454 454 ARG ARG R . n A 1 142 LEU 142 455 455 LEU LEU R . n A 1 143 PHE 143 456 456 PHE PHE R . n A 1 144 ARG 144 457 457 ARG ARG R . n A 1 145 LYS 145 458 458 LYS LYS R . n A 1 146 SER 146 459 459 SER SER R . n A 1 147 ASN 147 460 460 ASN ASN R . n A 1 148 LEU 148 461 461 LEU LEU R . n A 1 149 LYS 149 462 462 LYS LYS R . n A 1 150 PRO 150 463 463 PRO PRO R . n A 1 151 PHE 151 464 464 PHE PHE R . n A 1 152 GLU 152 465 465 GLU GLU R . n A 1 153 ARG 153 466 466 ARG ARG R . n A 1 154 ASP 154 467 467 ASP ASP R . n A 1 155 ILE 155 468 468 ILE ILE R . n A 1 156 SER 156 469 469 SER SER R . n A 1 157 THR 157 470 470 THR THR R . n A 1 158 GLU 158 471 471 GLU GLU R . n A 1 159 ILE 159 472 472 ILE ILE R . n A 1 160 TYR 160 473 473 TYR TYR R . n A 1 161 GLN 161 474 474 GLN GLN R . n A 1 162 ALA 162 475 475 ALA ALA R . n A 1 163 GLY 163 476 476 GLY GLY R . n A 1 164 ASN 164 477 477 ASN ASN R . n A 1 165 LYS 165 478 478 LYS LYS R . n A 1 166 PRO 166 479 479 PRO PRO R . n A 1 167 CYS 167 480 480 CYS CYS R . n A 1 168 ASN 168 481 481 ASN ASN R . n A 1 169 GLY 169 482 482 GLY GLY R . n A 1 170 VAL 170 483 483 VAL VAL R . n A 1 171 ALA 171 484 484 ALA ALA R . n A 1 172 GLY 172 485 485 GLY GLY R . n A 1 173 PHE 173 486 486 PHE PHE R . n A 1 174 ASN 174 487 487 ASN ASN R . n A 1 175 CYS 175 488 488 CYS CYS R . n A 1 176 TYR 176 489 489 TYR TYR R . n A 1 177 PHE 177 490 490 PHE PHE R . n A 1 178 PRO 178 491 491 PRO PRO R . n A 1 179 LEU 179 492 492 LEU LEU R . n A 1 180 ARG 180 493 493 ARG ARG R . n A 1 181 SER 181 494 494 SER SER R . n A 1 182 TYR 182 495 495 TYR TYR R . n A 1 183 SER 183 496 496 SER SER R . n A 1 184 PHE 184 497 497 PHE PHE R . n A 1 185 ARG 185 498 498 ARG ARG R . n A 1 186 PRO 186 499 499 PRO PRO R . n A 1 187 THR 187 500 500 THR THR R . n A 1 188 TYR 188 501 501 TYR TYR R . n A 1 189 GLY 189 502 502 GLY GLY R . n A 1 190 VAL 190 503 503 VAL VAL R . n A 1 191 GLY 191 504 504 GLY GLY R . n A 1 192 HIS 192 505 505 HIS HIS R . n A 1 193 GLN 193 506 506 GLN GLN R . n A 1 194 PRO 194 507 507 PRO PRO R . n A 1 195 TYR 195 508 508 TYR TYR R . n A 1 196 ARG 196 509 509 ARG ARG R . n A 1 197 VAL 197 510 510 VAL VAL R . n A 1 198 VAL 198 511 511 VAL VAL R . n A 1 199 VAL 199 512 512 VAL VAL R . n A 1 200 LEU 200 513 513 LEU LEU R . n A 1 201 SER 201 514 514 SER SER R . n A 1 202 PHE 202 515 515 PHE PHE R . n A 1 203 GLU 203 516 ? ? ? R . n A 1 204 LEU 204 517 ? ? ? R . n A 1 205 LEU 205 518 ? ? ? R . n A 1 206 HIS 206 519 ? ? ? R . n A 1 207 ALA 207 520 ? ? ? R . n A 1 208 PRO 208 521 ? ? ? R . n A 1 209 ALA 209 522 522 ALA ALA R . n A 1 210 THR 210 523 523 THR THR R . n A 1 211 VAL 211 524 524 VAL VAL R . n A 1 212 CYS 212 525 525 CYS CYS R . n A 1 213 GLY 213 526 526 GLY GLY R . n A 1 214 PRO 214 527 ? ? ? R . n A 1 215 LYS 215 528 ? ? ? R . n A 1 216 LYS 216 529 ? ? ? R . n A 1 217 SER 217 530 ? ? ? R . n A 1 218 THR 218 531 ? ? ? R . n A 1 219 ASN 219 532 ? ? ? R . n A 1 220 LEU 220 533 ? ? ? R . n A 1 221 VAL 221 534 ? ? ? R . n A 1 222 LYS 222 535 ? ? ? R . n A 1 223 ASN 223 536 ? ? ? R . n A 1 224 LYS 224 537 ? ? ? R . n A 1 225 CYS 225 538 ? ? ? R . n A 1 226 VAL 226 539 ? ? ? R . n A 1 227 ASN 227 540 ? ? ? R . n A 1 228 PHE 228 541 ? ? ? R . n A 1 229 HIS 229 542 ? ? ? R . n A 1 230 HIS 230 543 ? ? ? R . n A 1 231 HIS 231 544 ? ? ? R . n A 1 232 HIS 232 545 ? ? ? R . n A 1 233 HIS 233 546 ? ? ? R . n A 1 234 HIS 234 547 ? ? ? R . n A 1 235 HIS 235 548 ? ? ? R . n A 1 236 HIS 236 549 ? ? ? R . n B 2 1 GLN 1 20 20 GLN GLN H . n B 2 2 VAL 2 21 21 VAL VAL H . n B 2 3 GLN 3 22 22 GLN GLN H . n B 2 4 LEU 4 23 23 LEU LEU H . n B 2 5 VAL 5 24 24 VAL VAL H . n B 2 6 GLU 6 25 25 GLU GLU H . n B 2 7 SER 7 26 26 SER SER H . n B 2 8 GLY 8 27 27 GLY GLY H . n B 2 9 GLY 9 28 28 GLY GLY H . n B 2 10 GLY 10 29 29 GLY GLY H . n B 2 11 VAL 11 30 30 VAL VAL H . n B 2 12 VAL 12 31 31 VAL VAL H . n B 2 13 GLN 13 32 32 GLN GLN H . n B 2 14 PRO 14 33 33 PRO PRO H . n B 2 15 GLY 15 34 34 GLY GLY H . n B 2 16 ARG 16 35 35 ARG ARG H . n B 2 17 SER 17 36 36 SER SER H . n B 2 18 LEU 18 37 37 LEU LEU H . n B 2 19 ARG 19 38 38 ARG ARG H . n B 2 20 LEU 20 39 39 LEU LEU H . n B 2 21 SER 21 40 40 SER SER H . n B 2 22 CYS 22 41 41 CYS CYS H . n B 2 23 ALA 23 42 42 ALA ALA H . n B 2 24 ALA 24 43 43 ALA ALA H . n B 2 25 SER 25 44 44 SER SER H . n B 2 26 GLY 26 45 45 GLY GLY H . n B 2 27 PHE 27 46 46 PHE PHE H . n B 2 28 ILE 28 47 47 ILE ILE H . n B 2 29 PHE 29 48 48 PHE PHE H . n B 2 30 SER 30 49 49 SER SER H . n B 2 31 ARG 31 50 50 ARG ARG H . n B 2 32 TYR 32 51 51 TYR TYR H . n B 2 33 ASP 33 52 52 ASP ASP H . n B 2 34 ILE 34 53 53 ILE ILE H . n B 2 35 HIS 35 54 54 HIS HIS H . n B 2 36 TRP 36 55 55 TRP TRP H . n B 2 37 VAL 37 56 56 VAL VAL H . n B 2 38 ARG 38 57 57 ARG ARG H . n B 2 39 GLN 39 58 58 GLN GLN H . n B 2 40 THR 40 59 59 THR THR H . n B 2 41 PRO 41 60 60 PRO PRO H . n B 2 42 GLY 42 61 61 GLY GLY H . n B 2 43 LYS 43 62 62 LYS LYS H . n B 2 44 GLY 44 63 63 GLY GLY H . n B 2 45 LEU 45 64 64 LEU LEU H . n B 2 46 GLU 46 65 65 GLU GLU H . n B 2 47 TRP 47 66 66 TRP TRP H . n B 2 48 VAL 48 67 67 VAL VAL H . n B 2 49 ALA 49 68 68 ALA ALA H . n B 2 50 LEU 50 69 69 LEU LEU H . n B 2 51 ILE 51 70 70 ILE ILE H . n B 2 52 ARG 52 71 71 ARG ARG H . n B 2 53 TYR 53 72 72 TYR TYR H . n B 2 54 ASP 54 73 73 ASP ASP H . n B 2 55 GLY 55 74 74 GLY GLY H . n B 2 56 SER 56 75 75 SER SER H . n B 2 57 ASP 57 76 76 ASP ASP H . n B 2 58 LYS 58 77 77 LYS LYS H . n B 2 59 TYR 59 78 78 TYR TYR H . n B 2 60 TYR 60 79 79 TYR TYR H . n B 2 61 ALA 61 80 80 ALA ALA H . n B 2 62 ASP 62 81 81 ASP ASP H . n B 2 63 SER 63 82 82 SER SER H . n B 2 64 VAL 64 83 83 VAL VAL H . n B 2 65 LYS 65 84 84 LYS LYS H . n B 2 66 GLY 66 85 85 GLY GLY H . n B 2 67 ARG 67 86 86 ARG ARG H . n B 2 68 PHE 68 87 87 PHE PHE H . n B 2 69 THR 69 88 88 THR THR H . n B 2 70 ILE 70 89 89 ILE ILE H . n B 2 71 SER 71 90 90 SER SER H . n B 2 72 ARG 72 91 91 ARG ARG H . n B 2 73 ASP 73 92 92 ASP ASP H . n B 2 74 ASN 74 93 93 ASN ASN H . n B 2 75 SER 75 94 94 SER SER H . n B 2 76 LYS 76 95 95 LYS LYS H . n B 2 77 ASN 77 96 96 ASN ASN H . n B 2 78 THR 78 97 97 THR THR H . n B 2 79 LEU 79 98 98 LEU LEU H . n B 2 80 TYR 80 99 99 TYR TYR H . n B 2 81 LEU 81 100 100 LEU LEU H . n B 2 82 GLN 82 101 101 GLN GLN H . n B 2 83 MET 83 102 102 MET MET H . n B 2 84 ASN 84 103 103 ASN ASN H . n B 2 85 SER 85 104 104 SER SER H . n B 2 86 LEU 86 105 105 LEU LEU H . n B 2 87 ARG 87 106 106 ARG ARG H . n B 2 88 VAL 88 107 107 VAL VAL H . n B 2 89 GLU 89 108 108 GLU GLU H . n B 2 90 ASP 90 109 109 ASP ASP H . n B 2 91 THR 91 110 110 THR THR H . n B 2 92 ALA 92 111 111 ALA ALA H . n B 2 93 VAL 93 112 112 VAL VAL H . n B 2 94 TYR 94 113 113 TYR TYR H . n B 2 95 TYR 95 114 114 TYR TYR H . n B 2 96 CYS 96 115 115 CYS CYS H . n B 2 97 ALA 97 116 116 ALA ALA H . n B 2 98 LYS 98 117 117 LYS LYS H . n B 2 99 GLU 99 118 118 GLU GLU H . n B 2 100 GLY 100 119 119 GLY GLY H . n B 2 101 ILE 101 120 120 ILE ILE H . n B 2 102 GLN 102 121 121 GLN GLN H . n B 2 103 GLY 103 122 122 GLY GLY H . n B 2 104 TYR 104 123 123 TYR TYR H . n B 2 105 SER 105 124 124 SER SER H . n B 2 106 GLY 106 125 125 GLY GLY H . n B 2 107 TYR 107 126 126 TYR TYR H . n B 2 108 ASP 108 127 127 ASP ASP H . n B 2 109 TYR 109 128 128 TYR TYR H . n B 2 110 PHE 110 129 129 PHE PHE H . n B 2 111 TRP 111 130 130 TRP TRP H . n B 2 112 THR 112 131 131 THR THR H . n B 2 113 GLY 113 132 132 GLY GLY H . n B 2 114 PHE 114 133 133 PHE PHE H . n B 2 115 TYR 115 134 134 TYR TYR H . n B 2 116 PHE 116 135 135 PHE PHE H . n B 2 117 ASP 117 136 136 ASP ASP H . n B 2 118 TYR 118 137 137 TYR TYR H . n B 2 119 TRP 119 138 138 TRP TRP H . n B 2 120 GLY 120 139 139 GLY GLY H . n B 2 121 GLN 121 140 140 GLN GLN H . n B 2 122 GLY 122 141 141 GLY GLY H . n B 2 123 THR 123 142 142 THR THR H . n B 2 124 LEU 124 143 143 LEU LEU H . n B 2 125 VAL 125 144 144 VAL VAL H . n B 2 126 THR 126 145 145 THR THR H . n B 2 127 VAL 127 146 146 VAL VAL H . n C 3 1 VAL 1 21 21 VAL VAL L . n C 3 2 VAL 2 22 22 VAL VAL L . n C 3 3 MET 3 23 23 MET MET L . n C 3 4 THR 4 24 24 THR THR L . n C 3 5 GLN 5 25 25 GLN GLN L . n C 3 6 SER 6 26 26 SER SER L . n C 3 7 PRO 7 27 27 PRO PRO L . n C 3 8 LEU 8 28 28 LEU LEU L . n C 3 9 SER 9 29 29 SER SER L . n C 3 10 LEU 10 30 30 LEU LEU L . n C 3 11 PRO 11 31 31 PRO PRO L . n C 3 12 VAL 12 32 32 VAL VAL L . n C 3 13 THR 13 33 33 THR THR L . n C 3 14 PRO 14 34 34 PRO PRO L . n C 3 15 GLY 15 35 35 GLY GLY L . n C 3 16 GLU 16 36 36 GLU GLU L . n C 3 17 PRO 17 37 37 PRO PRO L . n C 3 18 ALA 18 38 38 ALA ALA L . n C 3 19 SER 19 39 39 SER SER L . n C 3 20 ILE 20 40 40 ILE ILE L . n C 3 21 SER 21 41 41 SER SER L . n C 3 22 CYS 22 42 42 CYS CYS L . n C 3 23 ARG 23 43 43 ARG ARG L . n C 3 24 SER 24 44 44 SER SER L . n C 3 25 SER 25 45 45 SER SER L . n C 3 26 GLN 26 46 46 GLN GLN L . n C 3 27 SER 27 47 47 SER SER L . n C 3 28 LEU 28 48 48 LEU LEU L . n C 3 29 LEU 29 49 49 LEU LEU L . n C 3 30 GLN 30 50 50 GLN GLN L . n C 3 31 SER 31 51 51 SER SER L . n C 3 32 ASN 32 52 52 ASN ASN L . n C 3 33 GLY 33 53 53 GLY GLY L . n C 3 34 TYR 34 54 54 TYR TYR L . n C 3 35 ASN 35 55 55 ASN ASN L . n C 3 36 TYR 36 56 56 TYR TYR L . n C 3 37 LEU 37 57 57 LEU LEU L . n C 3 38 ASP 38 58 58 ASP ASP L . n C 3 39 TRP 39 59 59 TRP TRP L . n C 3 40 TYR 40 60 60 TYR TYR L . n C 3 41 LEU 41 61 61 LEU LEU L . n C 3 42 GLN 42 62 62 GLN GLN L . n C 3 43 LYS 43 63 63 LYS LYS L . n C 3 44 PRO 44 64 64 PRO PRO L . n C 3 45 GLY 45 65 65 GLY GLY L . n C 3 46 GLN 46 66 66 GLN GLN L . n C 3 47 SER 47 67 67 SER SER L . n C 3 48 PRO 48 68 68 PRO PRO L . n C 3 49 GLN 49 69 69 GLN GLN L . n C 3 50 LEU 50 70 70 LEU LEU L . n C 3 51 LEU 51 71 71 LEU LEU L . n C 3 52 ILE 52 72 72 ILE ILE L . n C 3 53 TYR 53 73 73 TYR TYR L . n C 3 54 LEU 54 74 74 LEU LEU L . n C 3 55 GLY 55 75 75 GLY GLY L . n C 3 56 SER 56 76 76 SER SER L . n C 3 57 ASN 57 77 77 ASN ASN L . n C 3 58 ARG 58 78 78 ARG ARG L . n C 3 59 ALA 59 79 79 ALA ALA L . n C 3 60 SER 60 80 80 SER SER L . n C 3 61 GLY 61 81 81 GLY GLY L . n C 3 62 VAL 62 82 82 VAL VAL L . n C 3 63 PRO 63 83 83 PRO PRO L . n C 3 64 ASP 64 84 84 ASP ASP L . n C 3 65 ARG 65 85 85 ARG ARG L . n C 3 66 PHE 66 86 86 PHE PHE L . n C 3 67 SER 67 87 87 SER SER L . n C 3 68 GLY 68 88 88 GLY GLY L . n C 3 69 SER 69 89 89 SER SER L . n C 3 70 GLY 70 90 90 GLY GLY L . n C 3 71 SER 71 91 91 SER SER L . n C 3 72 GLY 72 92 92 GLY GLY L . n C 3 73 THR 73 93 93 THR THR L . n C 3 74 ASP 74 94 94 ASP ASP L . n C 3 75 PHE 75 95 95 PHE PHE L . n C 3 76 THR 76 96 96 THR THR L . n C 3 77 LEU 77 97 97 LEU LEU L . n C 3 78 LYS 78 98 98 LYS LYS L . n C 3 79 ILE 79 99 99 ILE ILE L . n C 3 80 SER 80 100 100 SER SER L . n C 3 81 ARG 81 101 101 ARG ARG L . n C 3 82 VAL 82 102 102 VAL VAL L . n C 3 83 GLU 83 103 103 GLU GLU L . n C 3 84 ALA 84 104 104 ALA ALA L . n C 3 85 GLU 85 105 105 GLU GLU L . n C 3 86 ASP 86 106 106 ASP ASP L . n C 3 87 VAL 87 107 107 VAL VAL L . n C 3 88 GLY 88 108 108 GLY GLY L . n C 3 89 ILE 89 109 109 ILE ILE L . n C 3 90 TYR 90 110 110 TYR TYR L . n C 3 91 TYR 91 111 111 TYR TYR L . n C 3 92 CYS 92 112 112 CYS CYS L . n C 3 93 MET 93 113 113 MET MET L . n C 3 94 GLN 94 114 114 GLN GLN L . n C 3 95 ALA 95 115 115 ALA ALA L . n C 3 96 LEU 96 116 116 LEU LEU L . n C 3 97 GLN 97 117 117 GLN GLN L . n C 3 98 THR 98 118 118 THR THR L . n C 3 99 PRO 99 119 119 PRO PRO L . n C 3 100 LEU 100 120 120 LEU LEU L . n C 3 101 THR 101 121 121 THR THR L . n C 3 102 PHE 102 122 122 PHE PHE L . n C 3 103 GLY 103 123 123 GLY GLY L . n C 3 104 GLY 104 124 124 GLY GLY L . n C 3 105 GLY 105 125 125 GLY GLY L . n C 3 106 THR 106 126 126 THR THR L . n C 3 107 LYS 107 127 127 LYS LYS L . n C 3 108 VAL 108 128 128 VAL VAL L . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email liupulan1995@163.com _pdbx_contact_author.name_first Pulan _pdbx_contact_author.name_last Liu _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-0046-6997 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2023-03-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name PHENIX _software.os ? _software.os_version ? _software.type ? _software.version 1.18.2_3874: _software.pdbx_ordinal 1 # _pdbx_entry_details.entry_id 7WSC _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N # _em_3d_fitting.entry_id 7WSC _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol ? _em_3d_fitting.ref_space ? _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 7WSC _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 95595 _em_3d_reconstruction.resolution 3.78 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 7.2 _em_buffer.specimen_id 1 _em_buffer.name ? # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.details _em_entity_assembly.name _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.entity_id_list _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details 1 0 ? 'local structure of BD55-3500 and omicron RBD' RECOMBINANT COMPLEX '1, 2, 3' ? ? 2 1 ? BD55-3500 RECOMBINANT COMPLEX '2, 3' ? ? 3 1 ? 'omicron RBD' RECOMBINANT COMPLEX 1 ? ? # _em_imaging.id 1 _em_imaging.entry_id 7WSC _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen ? _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max 5000 _em_imaging.nominal_defocus_min 1200 _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature ? _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity ? _em_vitrification.instrument ? _em_vitrification.entry_id 7WSC _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 7WSC _em_experiment.id 1 _em_experiment.aggregation_state '3D ARRAY' _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O R TYR 473 ? ? O R CYS 488 ? ? 1.60 2 1 OG1 L THR 33 ? ? OE1 L GLU 36 ? ? 2.07 3 1 OG H SER 36 ? ? O H MET 102 ? ? 2.09 4 1 OD1 H ASP 73 ? ? OG H SER 75 ? ? 2.12 5 1 OG R SER 359 ? ? OD1 R ASN 394 ? ? 2.12 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CA R CYS 379 ? ? CB R CYS 379 ? ? 1.416 1.526 -0.110 0.013 N 2 1 CB R CYS 379 ? ? SG R CYS 379 ? ? 1.711 1.812 -0.101 0.016 N 3 1 CB R TYR 380 ? ? CG R TYR 380 ? ? 1.341 1.512 -0.171 0.015 N 4 1 CG R TYR 380 ? ? CD2 R TYR 380 ? ? 1.282 1.387 -0.105 0.013 N 5 1 CE1 R TYR 380 ? ? CZ R TYR 380 ? ? 1.286 1.381 -0.095 0.013 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA R CYS 379 ? ? CB R CYS 379 ? ? SG R CYS 379 ? ? 97.12 114.00 -16.88 1.80 N 2 1 N R CYS 379 ? ? CA R CYS 379 ? ? C R CYS 379 ? ? 128.75 111.00 17.75 2.70 N 3 1 N R ALA 475 ? ? CA R ALA 475 ? ? C R ALA 475 ? ? 89.55 111.00 -21.45 2.70 N 4 1 N R ASN 477 ? ? CA R ASN 477 ? ? C R ASN 477 ? ? 127.23 111.00 16.23 2.70 N 5 1 C R LYS 478 ? ? N R PRO 479 ? ? CA R PRO 479 ? ? 129.66 119.30 10.36 1.50 Y 6 1 C R LYS 478 ? ? N R PRO 479 ? ? CD R PRO 479 ? ? 107.13 128.40 -21.27 2.10 Y 7 1 N R GLY 482 ? ? CA R GLY 482 ? ? C R GLY 482 ? ? 85.51 113.10 -27.59 2.50 N 8 1 N R CYS 488 ? ? CA R CYS 488 ? ? C R CYS 488 ? ? 94.47 111.00 -16.53 2.70 N 9 1 N R PHE 490 ? ? CA R PHE 490 ? ? CB R PHE 490 ? ? 99.57 110.60 -11.03 1.80 N 10 1 C R PHE 490 ? ? N R PRO 491 ? ? CA R PRO 491 ? ? 132.96 119.30 13.66 1.50 Y 11 1 C R PHE 490 ? ? N R PRO 491 ? ? CD R PRO 491 ? ? 94.85 128.40 -33.55 2.10 Y 12 1 CA L PRO 37 ? ? N L PRO 37 ? ? CD L PRO 37 ? ? 98.55 111.70 -13.15 1.40 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU R 335 ? ? 60.36 69.20 2 1 CYS R 336 ? ? -38.39 134.66 3 1 ALA R 352 ? ? -95.42 33.59 4 1 SER R 359 ? ? -166.21 -169.64 5 1 ASN R 360 ? ? 34.94 49.59 6 1 ASN R 370 ? ? -166.20 -43.43 7 1 LEU R 371 ? ? -67.35 -109.16 8 1 ALA R 372 ? ? -24.74 104.23 9 1 PHE R 375 ? ? -66.88 -134.34 10 1 THR R 376 ? ? -162.09 -26.91 11 1 PHE R 377 ? ? 9.04 44.59 12 1 CYS R 379 ? ? -57.32 84.00 13 1 SER R 383 ? ? -37.91 129.50 14 1 ASP R 389 ? ? -93.77 50.95 15 1 ALA R 397 ? ? -100.81 76.11 16 1 PHE R 400 ? ? -169.23 -165.58 17 1 ASP R 428 ? ? -91.48 48.88 18 1 LEU R 441 ? ? 67.47 -2.17 19 1 GLN R 474 ? ? -62.50 81.10 20 1 ASN R 477 ? ? -7.91 146.83 21 1 LYS R 478 ? ? -58.15 -73.17 22 1 PRO R 479 ? ? 48.18 -73.67 23 1 CYS R 480 ? ? -163.46 -36.07 24 1 ASN R 481 ? ? 41.47 87.06 25 1 VAL R 483 ? ? 73.10 130.84 26 1 ASN R 487 ? ? -171.91 119.04 27 1 CYS R 488 ? ? -143.39 -58.83 28 1 TYR R 489 ? ? 89.24 146.42 29 1 PHE R 490 ? ? -95.16 34.14 30 1 PRO R 491 ? ? 0.43 28.90 31 1 LEU R 492 ? ? -153.52 71.76 32 1 ARG R 493 ? ? -67.40 -179.36 33 1 SER R 494 ? ? -110.93 -169.16 34 1 VAL H 67 ? ? -105.87 -62.24 35 1 TYR H 72 ? ? 61.67 -9.92 36 1 VAL H 83 ? ? -123.01 -66.76 37 1 LYS H 84 ? ? 38.70 55.09 38 1 SER H 94 ? ? 70.77 -8.89 39 1 THR H 131 ? ? 70.42 -7.31 40 1 LEU L 28 ? ? -60.30 1.68 41 1 THR L 33 ? ? -49.44 153.58 42 1 LEU L 49 ? ? -58.18 107.84 43 1 GLN L 62 ? ? -160.38 114.98 44 1 PHE L 86 ? ? -91.01 50.57 45 1 SER L 91 ? ? -152.29 -159.15 46 1 ALA L 115 ? ? -112.11 79.87 47 1 LEU L 116 ? ? -130.73 -38.29 # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 LEU R 368 ? ? 11.45 2 1 ASN R 477 ? ? -10.86 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 R ALA 314 ? A ALA 1 2 1 Y 1 R ALA 315 ? A ALA 2 3 1 Y 1 R GLY 316 ? A GLY 3 4 1 Y 1 R SER 317 ? A SER 4 5 1 Y 1 R ALA 318 ? A ALA 5 6 1 Y 1 R ARG 319 ? A ARG 6 7 1 Y 1 R VAL 320 ? A VAL 7 8 1 Y 1 R GLN 321 ? A GLN 8 9 1 Y 1 R PRO 322 ? A PRO 9 10 1 Y 1 R THR 323 ? A THR 10 11 1 Y 1 R GLU 324 ? A GLU 11 12 1 Y 1 R SER 325 ? A SER 12 13 1 Y 1 R ILE 326 ? A ILE 13 14 1 Y 1 R VAL 327 ? A VAL 14 15 1 Y 1 R ARG 328 ? A ARG 15 16 1 Y 1 R PHE 329 ? A PHE 16 17 1 Y 1 R PRO 330 ? A PRO 17 18 1 Y 1 R ASN 331 ? A ASN 18 19 1 Y 1 R ILE 332 ? A ILE 19 20 1 Y 1 R THR 333 ? A THR 20 21 1 Y 1 R GLU 516 ? A GLU 203 22 1 Y 1 R LEU 517 ? A LEU 204 23 1 Y 1 R LEU 518 ? A LEU 205 24 1 Y 1 R HIS 519 ? A HIS 206 25 1 Y 1 R ALA 520 ? A ALA 207 26 1 Y 1 R PRO 521 ? A PRO 208 27 1 Y 1 R PRO 527 ? A PRO 214 28 1 Y 1 R LYS 528 ? A LYS 215 29 1 Y 1 R LYS 529 ? A LYS 216 30 1 Y 1 R SER 530 ? A SER 217 31 1 Y 1 R THR 531 ? A THR 218 32 1 Y 1 R ASN 532 ? A ASN 219 33 1 Y 1 R LEU 533 ? A LEU 220 34 1 Y 1 R VAL 534 ? A VAL 221 35 1 Y 1 R LYS 535 ? A LYS 222 36 1 Y 1 R ASN 536 ? A ASN 223 37 1 Y 1 R LYS 537 ? A LYS 224 38 1 Y 1 R CYS 538 ? A CYS 225 39 1 Y 1 R VAL 539 ? A VAL 226 40 1 Y 1 R ASN 540 ? A ASN 227 41 1 Y 1 R PHE 541 ? A PHE 228 42 1 Y 1 R HIS 542 ? A HIS 229 43 1 Y 1 R HIS 543 ? A HIS 230 44 1 Y 1 R HIS 544 ? A HIS 231 45 1 Y 1 R HIS 545 ? A HIS 232 46 1 Y 1 R HIS 546 ? A HIS 233 47 1 Y 1 R HIS 547 ? A HIS 234 48 1 Y 1 R HIS 548 ? A HIS 235 49 1 Y 1 R HIS 549 ? A HIS 236 # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # loop_ _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue 1 2 ? ? 9606 ? ? 'Homo sapiens' ? ? 2 3 ? ? 2901879 ? ? 'Severe acute respiratory syndrome coronavirus' ? ? # loop_ _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain 1 2 ? 9606 'Homo sapiens' ? ? 2 3 ? 9606 'Homo sapiens' ? ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 59 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? _em_image_recording.avg_electron_dose_per_subtomogram ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'SYMMETRY DETERMINATION' ? ? ? 1 1 1 2 'IMAGE ACQUISITION' ? ? ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? ? ? 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? ? ? ? ? ? 8 'MODEL REFINEMENT' ? ? ? ? ? ? 9 OTHER ? ? ? ? ? ? 10 'INITIAL EULER ASSIGNMENT' ? ? ? 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? ? ? 1 ? ? 12 CLASSIFICATION ? ? ? 1 ? ? 13 RECONSTRUCTION ? ? ? 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'National Science Foundation (NSF, China)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero D 4 NAG 1 A NAG 1 A NAG 1 n D 4 NAG 2 A NAG 2 A NAG 2 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 4 DGlcpNAcb1-4DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 4 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 3 4 '[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 4 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 4 NAG 1 n 4 NAG 2 n # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #