HEADER VIRAL PROTEIN/IMMUNE SYSTEM 24-FEB-22 7X1M TITLE THE COMPLEX STRUCTURE OF OMICRON BA.1 RBD WITH BD604, S309,AND S304 COMPND MOL_ID: 1; COMPND 2 MOLECULE: S309 FAB HEAVY CHAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: S309 FAB LIGHT CHAIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: BD-604 FAB HEAVY CHAIN; COMPND 11 CHAIN: C; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: BD-604 FAB LIGHT CHAIN; COMPND 15 CHAIN: D; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 5; COMPND 18 MOLECULE: S304 FAB HAAVY CHAIN; COMPND 19 CHAIN: H; COMPND 20 ENGINEERED: YES; COMPND 21 MOL_ID: 6; COMPND 22 MOLECULE: S304 FAB LIGHT CHAIN; COMPND 23 CHAIN: L; COMPND 24 ENGINEERED: YES; COMPND 25 MOL_ID: 7; COMPND 26 MOLECULE: SPIKE PROTEIN S1; COMPND 27 CHAIN: M; COMPND 28 FRAGMENT: RBD; COMPND 29 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 20 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 22 MOL_ID: 4; SOURCE 23 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 24 ORGANISM_COMMON: HUMAN; SOURCE 25 ORGANISM_TAXID: 9606; SOURCE 26 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 27 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 28 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 29 MOL_ID: 5; SOURCE 30 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 31 ORGANISM_COMMON: HUMAN; SOURCE 32 ORGANISM_TAXID: 9606; SOURCE 33 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 34 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 35 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 36 MOL_ID: 6; SOURCE 37 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 38 ORGANISM_COMMON: HUMAN; SOURCE 39 ORGANISM_TAXID: 9606; SOURCE 40 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 41 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 42 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 43 MOL_ID: 7; SOURCE 44 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 45 2; SOURCE 46 ORGANISM_COMMON: 2019-NCOV,SARS-COV-2; SOURCE 47 ORGANISM_TAXID: 2697049; SOURCE 48 VARIANT: OMICRON BA.1; SOURCE 49 GENE: S, 2; SOURCE 50 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 51 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 52 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS ANTIBODY VIRAL PROTEIN COMPLEX, VIRAL PROTEIN, VIRAL PROTEIN-IMMUNE KEYWDS 2 SYSTEM COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR M.HUANG,Y.F.XIE,J.X.QI REVDAT 2 19-JUL-23 7X1M 1 JRNL REVDAT 1 06-JUL-22 7X1M 0 JRNL AUTH M.HUANG,L.WU,A.ZHENG,Y.XIE,Q.HE,X.RONG,P.HAN,P.DU,P.HAN, JRNL AUTH 2 Z.ZHANG,R.ZHAO,Y.JIA,L.LI,B.BAI,Z.HU,S.HU,S.NIU,Y.HU,H.LIU, JRNL AUTH 3 B.LIU,K.CUI,W.LI,X.ZHAO,K.LIU,J.QI,Q.WANG,G.F.GAO JRNL TITL ATLAS OF CURRENTLY AVAILABLE HUMAN NEUTRALIZING ANTIBODIES JRNL TITL 2 AGAINST SARS-COV-2 AND ESCAPE BY OMICRON SUB-VARIANTS JRNL TITL 3 BA.1/BA.1.1/BA.2/BA.3. JRNL REF IMMUNITY V. 55 1501 2022 JRNL REFN ISSN 1074-7613 JRNL PMID 35777362 JRNL DOI 10.1016/J.IMMUNI.2022.06.005 REMARK 2 REMARK 2 RESOLUTION. 2.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.740 REMARK 3 NUMBER OF PARTICLES : 553923 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7X1M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-MAR-22. REMARK 100 THE DEPOSITION ID IS D_1300027812. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : BD604 FAB, S309 FAB AND S304 REMARK 245 FAB COMPLEX WITH OMICRON BA.1 REMARK 245 RBD; BD604 FAB, S309 FAB AND REMARK 245 S304 FAB; OMICRON BA.1 RBD REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEPTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, H, L, M, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 146 REMARK 465 GLY A 147 REMARK 465 GLY A 148 REMARK 465 SER A 229 REMARK 465 CYS A 230 REMARK 465 GLU B 213 REMARK 465 CYS B 214 REMARK 465 CYS C 220 REMARK 465 ASP C 221 REMARK 465 LYS C 222 REMARK 465 CYS D 214 REMARK 465 SER H 120 REMARK 465 ALA H 121 REMARK 465 SER H 122 REMARK 465 THR H 123 REMARK 465 LYS H 124 REMARK 465 GLY H 125 REMARK 465 PRO H 126 REMARK 465 SER H 127 REMARK 465 VAL H 128 REMARK 465 PHE H 129 REMARK 465 PRO H 130 REMARK 465 LEU H 131 REMARK 465 ALA H 132 REMARK 465 PRO H 133 REMARK 465 SER H 134 REMARK 465 SER H 135 REMARK 465 LYS H 136 REMARK 465 SER H 137 REMARK 465 THR H 138 REMARK 465 SER H 139 REMARK 465 GLY H 140 REMARK 465 GLY H 141 REMARK 465 THR H 142 REMARK 465 ALA H 143 REMARK 465 ALA H 144 REMARK 465 LEU H 145 REMARK 465 GLY H 146 REMARK 465 CYS H 147 REMARK 465 LEU H 148 REMARK 465 VAL H 149 REMARK 465 LYS H 150 REMARK 465 ASP H 151 REMARK 465 TYR H 152 REMARK 465 PHE H 153 REMARK 465 PRO H 154 REMARK 465 GLU H 155 REMARK 465 PRO H 156 REMARK 465 VAL H 157 REMARK 465 THR H 158 REMARK 465 VAL H 159 REMARK 465 SER H 160 REMARK 465 TRP H 161 REMARK 465 ASN H 162 REMARK 465 SER H 163 REMARK 465 GLY H 164 REMARK 465 ALA H 165 REMARK 465 LEU H 166 REMARK 465 THR H 167 REMARK 465 SER H 168 REMARK 465 GLY H 169 REMARK 465 VAL H 170 REMARK 465 HIS H 171 REMARK 465 THR H 172 REMARK 465 PHE H 173 REMARK 465 PRO H 174 REMARK 465 ALA H 175 REMARK 465 VAL H 176 REMARK 465 LEU H 177 REMARK 465 GLN H 178 REMARK 465 SER H 179 REMARK 465 SER H 180 REMARK 465 GLY H 181 REMARK 465 LEU H 182 REMARK 465 TYR H 183 REMARK 465 SER H 184 REMARK 465 LEU H 185 REMARK 465 SER H 186 REMARK 465 SER H 187 REMARK 465 VAL H 188 REMARK 465 VAL H 189 REMARK 465 THR H 190 REMARK 465 VAL H 191 REMARK 465 PRO H 192 REMARK 465 SER H 193 REMARK 465 SER H 194 REMARK 465 SER H 195 REMARK 465 LEU H 196 REMARK 465 GLY H 197 REMARK 465 THR H 198 REMARK 465 GLN H 199 REMARK 465 THR H 200 REMARK 465 TYR H 201 REMARK 465 ILE H 202 REMARK 465 CYS H 203 REMARK 465 ASN H 204 REMARK 465 VAL H 205 REMARK 465 ASN H 206 REMARK 465 HIS H 207 REMARK 465 LYS H 208 REMARK 465 PRO H 209 REMARK 465 SER H 210 REMARK 465 ASN H 211 REMARK 465 THR H 212 REMARK 465 LYS H 213 REMARK 465 VAL H 214 REMARK 465 ASP H 215 REMARK 465 LYS H 216 REMARK 465 LYS H 217 REMARK 465 VAL H 218 REMARK 465 GLU H 219 REMARK 465 PRO H 220 REMARK 465 LYS H 221 REMARK 465 SER H 222 REMARK 465 CYS H 223 REMARK 465 ARG L 109 REMARK 465 THR L 110 REMARK 465 VAL L 111 REMARK 465 ALA L 112 REMARK 465 ALA L 113 REMARK 465 PRO L 114 REMARK 465 SER L 115 REMARK 465 VAL L 116 REMARK 465 PHE L 117 REMARK 465 ILE L 118 REMARK 465 PHE L 119 REMARK 465 PRO L 120 REMARK 465 PRO L 121 REMARK 465 SER L 122 REMARK 465 ASP L 123 REMARK 465 GLU L 124 REMARK 465 GLN L 125 REMARK 465 LEU L 126 REMARK 465 LYS L 127 REMARK 465 SER L 128 REMARK 465 GLY L 129 REMARK 465 THR L 130 REMARK 465 ALA L 131 REMARK 465 SER L 132 REMARK 465 VAL L 133 REMARK 465 VAL L 134 REMARK 465 CYS L 135 REMARK 465 LEU L 136 REMARK 465 LEU L 137 REMARK 465 ASN L 138 REMARK 465 ASN L 139 REMARK 465 PHE L 140 REMARK 465 TYR L 141 REMARK 465 PRO L 142 REMARK 465 ARG L 143 REMARK 465 GLU L 144 REMARK 465 ALA L 145 REMARK 465 LYS L 146 REMARK 465 VAL L 147 REMARK 465 GLN L 148 REMARK 465 TRP L 149 REMARK 465 LYS L 150 REMARK 465 VAL L 151 REMARK 465 ASP L 152 REMARK 465 ASN L 153 REMARK 465 ALA L 154 REMARK 465 LEU L 155 REMARK 465 GLN L 156 REMARK 465 SER L 157 REMARK 465 GLY L 158 REMARK 465 ASN L 159 REMARK 465 SER L 160 REMARK 465 GLN L 161 REMARK 465 GLU L 162 REMARK 465 SER L 163 REMARK 465 VAL L 164 REMARK 465 THR L 165 REMARK 465 GLU L 166 REMARK 465 GLN L 167 REMARK 465 ASP L 168 REMARK 465 SER L 169 REMARK 465 LYS L 170 REMARK 465 ASP L 171 REMARK 465 SER L 172 REMARK 465 THR L 173 REMARK 465 TYR L 174 REMARK 465 SER L 175 REMARK 465 LEU L 176 REMARK 465 SER L 177 REMARK 465 SER L 178 REMARK 465 THR L 179 REMARK 465 LEU L 180 REMARK 465 THR L 181 REMARK 465 LEU L 182 REMARK 465 SER L 183 REMARK 465 LYS L 184 REMARK 465 ALA L 185 REMARK 465 ASP L 186 REMARK 465 TYR L 187 REMARK 465 GLU L 188 REMARK 465 LYS L 189 REMARK 465 HIS L 190 REMARK 465 LYS L 191 REMARK 465 VAL L 192 REMARK 465 TYR L 193 REMARK 465 ALA L 194 REMARK 465 CYS L 195 REMARK 465 GLU L 196 REMARK 465 VAL L 197 REMARK 465 THR L 198 REMARK 465 HIS L 199 REMARK 465 GLN L 200 REMARK 465 GLY L 201 REMARK 465 LEU L 202 REMARK 465 SER L 203 REMARK 465 SER L 204 REMARK 465 PRO L 205 REMARK 465 VAL L 206 REMARK 465 THR L 207 REMARK 465 LYS L 208 REMARK 465 SER L 209 REMARK 465 PHE L 210 REMARK 465 ASN L 211 REMARK 465 ARG L 212 REMARK 465 GLY L 213 REMARK 465 GLU L 214 REMARK 465 CYS L 215 REMARK 465 LYS M 528 REMARK 465 LYS M 529 REMARK 465 SER M 530 REMARK 465 THR M 531 REMARK 465 ASN M 532 REMARK 465 LEU M 533 REMARK 465 VAL M 534 REMARK 465 LYS M 535 REMARK 465 ASN M 536 REMARK 465 LYS M 537 REMARK 465 CYS M 538 REMARK 465 VAL M 539 REMARK 465 ASN M 540 REMARK 465 PHE M 541 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR H 90 O LEU H 116 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 16 -165.83 -79.12 REMARK 500 ARG A 67 1.77 -150.33 REMARK 500 ALA A 128 -168.62 -166.53 REMARK 500 SER A 134 76.96 -102.30 REMARK 500 PRO A 161 -155.33 -84.93 REMARK 500 GLU A 162 -167.35 -75.55 REMARK 500 PRO A 163 136.86 -35.88 REMARK 500 PRO B 15 83.54 -68.72 REMARK 500 ALA B 52 -10.59 72.18 REMARK 500 SER B 53 -36.71 -132.80 REMARK 500 SER B 95 161.95 62.91 REMARK 500 VAL B 115 130.94 -38.16 REMARK 500 ASN B 138 120.32 -39.07 REMARK 500 ASP B 151 -25.55 71.17 REMARK 500 ASN B 152 -8.46 -157.51 REMARK 500 SER B 159 117.32 -161.88 REMARK 500 VAL C 2 107.41 62.82 REMARK 500 LYS C 43 -30.34 -130.68 REMARK 500 ALA C 118 -138.63 39.84 REMARK 500 SER C 119 135.75 -172.29 REMARK 500 SER C 131 -177.56 -170.17 REMARK 500 PRO C 206 0.40 -67.23 REMARK 500 GLN D 27 -33.19 -130.52 REMARK 500 SER D 30 -143.20 62.51 REMARK 500 ALA D 51 -8.81 75.41 REMARK 500 SER D 52 -17.83 -140.28 REMARK 500 PRO D 59 171.91 -59.67 REMARK 500 PRO D 80 -3.85 -54.49 REMARK 500 LEU D 91 -144.17 -150.21 REMARK 500 ASN D 92 73.61 76.97 REMARK 500 SER D 93 71.67 66.23 REMARK 500 ASP D 94 9.95 83.34 REMARK 500 ASN D 138 66.70 60.92 REMARK 500 PHE D 139 -62.38 -100.50 REMARK 500 TYR D 140 95.68 53.19 REMARK 500 ASP D 151 -27.92 70.77 REMARK 500 ASN D 152 -9.65 -152.95 REMARK 500 PHE H 29 41.94 -88.21 REMARK 500 ALA H 54 17.93 -140.22 REMARK 500 ALA H 91 -177.76 -173.33 REMARK 500 ALA L 51 -12.94 74.60 REMARK 500 SER L 52 -16.29 -140.30 REMARK 500 ASP L 82 50.56 -90.15 REMARK 500 ALA L 84 -170.84 -170.29 REMARK 500 PRO M 373 45.90 -78.32 REMARK 500 ASP M 389 35.96 -140.40 REMARK 500 ASN M 422 -51.43 -122.64 REMARK 500 ASP M 428 73.64 -100.79 REMARK 500 THR M 430 71.28 57.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 162 PRO A 163 -123.95 REMARK 500 TYR D 140 PRO D 141 32.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-32944 RELATED DB: EMDB REMARK 900 THE COMPLEX STRUCTURE OF OMICRON BA.1 RBD WITH BD604, S309,AND S304 DBREF 7X1M A 1 230 PDB 7X1M 7X1M 1 230 DBREF 7X1M B 1 214 PDB 7X1M 7X1M 1 214 DBREF 7X1M C 1 222 PDB 7X1M 7X1M 1 222 DBREF 7X1M D 1 214 PDB 7X1M 7X1M 1 214 DBREF 7X1M H 1 223 PDB 7X1M 7X1M 1 223 DBREF 7X1M L 1 215 PDB 7X1M 7X1M 1 215 DBREF 7X1M M 333 541 UNP P0DTC2 SPIKE_SARS2 333 541 SEQADV 7X1M ASP M 339 UNP P0DTC2 GLY 339 VARIANT SEQADV 7X1M LEU M 371 UNP P0DTC2 SER 371 VARIANT SEQADV 7X1M PRO M 373 UNP P0DTC2 SER 373 VARIANT SEQADV 7X1M PHE M 375 UNP P0DTC2 SER 375 VARIANT SEQADV 7X1M ASN M 417 UNP P0DTC2 LYS 417 VARIANT SEQADV 7X1M LYS M 440 UNP P0DTC2 ASN 440 VARIANT SEQADV 7X1M SER M 446 UNP P0DTC2 GLY 446 VARIANT SEQADV 7X1M ASN M 477 UNP P0DTC2 SER 477 VARIANT SEQADV 7X1M LYS M 478 UNP P0DTC2 THR 478 VARIANT SEQADV 7X1M ALA M 484 UNP P0DTC2 GLU 484 VARIANT SEQADV 7X1M ARG M 493 UNP P0DTC2 GLN 493 VARIANT SEQADV 7X1M SER M 496 UNP P0DTC2 GLY 496 VARIANT SEQADV 7X1M ARG M 498 UNP P0DTC2 GLN 498 VARIANT SEQADV 7X1M TYR M 501 UNP P0DTC2 ASN 501 VARIANT SEQADV 7X1M HIS M 505 UNP P0DTC2 TYR 505 VARIANT SEQRES 1 A 230 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 A 230 PRO GLY ALA SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 A 230 TYR PRO PHE THR SER TYR GLY ILE SER TRP VAL ARG GLN SEQRES 4 A 230 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY TRP ILE SER SEQRES 5 A 230 THR TYR ASN GLY ASN THR ASN TYR ALA GLN LYS PHE GLN SEQRES 6 A 230 GLY ARG VAL THR MET THR THR ASP THR SER THR THR THR SEQRES 7 A 230 GLY TYR MET GLU LEU ARG ARG LEU ARG SER ASP ASP THR SEQRES 8 A 230 ALA VAL TYR TYR CYS ALA ARG ASP TYR THR ARG GLY ALA SEQRES 9 A 230 TRP PHE GLY GLU SER LEU ILE GLY GLY PHE ASP ASN TRP SEQRES 10 A 230 GLY GLN GLY THR LEU VAL THR VAL SER SER ALA SER THR SEQRES 11 A 230 LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SEQRES 12 A 230 SER THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL SEQRES 13 A 230 LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SEQRES 14 A 230 SER GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA SEQRES 15 A 230 VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL SEQRES 16 A 230 VAL THR VAL PRO SER SER SER LEU GLY THR GLN THR TYR SEQRES 17 A 230 ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL SEQRES 18 A 230 ASP LYS LYS VAL GLU PRO LYS SER CYS SEQRES 1 B 214 GLU ILE VAL LEU THR GLN SER PRO GLY THR LEU SER LEU SEQRES 2 B 214 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 B 214 GLN THR VAL SER SER THR SER LEU ALA TRP TYR GLN GLN SEQRES 4 B 214 LYS PRO GLY GLN ALA PRO ARG LEU LEU ILE TYR GLY ALA SEQRES 5 B 214 SER SER ARG ALA THR GLY ILE PRO ASP ARG PHE SER GLY SEQRES 6 B 214 SER GLY SER GLY THR ASP PHE THR LEU THR ILE SER ARG SEQRES 7 B 214 LEU GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN GLN SEQRES 8 B 214 HIS ASP THR SER LEU THR PHE GLY GLY GLY THR LYS VAL SEQRES 9 B 214 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 B 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 B 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 B 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 B 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 B 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 B 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 B 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 B 214 PHE ASN ARG GLY GLU CYS SEQRES 1 C 222 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU ILE GLN SEQRES 2 C 222 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 C 222 ILE ILE VAL SER SER ASN TYR MET THR TRP VAL ARG GLN SEQRES 4 C 222 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER VAL ILE TYR SEQRES 5 C 222 SER GLY GLY SER THR PHE TYR ALA ASP SER VAL LYS GLY SEQRES 6 C 222 ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN THR LEU SEQRES 7 C 222 TYR LEU GLN MET SER SER LEU ARG ALA GLU ASP THR ALA SEQRES 8 C 222 VAL TYR TYR CYS ALA ARG ASP LEU GLY PRO TYR GLY MET SEQRES 9 C 222 ASP VAL TRP GLY GLN GLY THR THR VAL THR VAL SER SER SEQRES 10 C 222 ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SEQRES 11 C 222 SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY SEQRES 12 C 222 CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SEQRES 13 C 222 SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR SEQRES 14 C 222 PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SEQRES 15 C 222 SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR SEQRES 16 C 222 GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN SEQRES 17 C 222 THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SER CYS ASP SEQRES 18 C 222 LYS SEQRES 1 D 214 ASP ILE GLN LEU THR GLN SER PRO SER PHE LEU SER ALA SEQRES 2 D 214 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 D 214 GLN GLY ILE SER SER ASP LEU ALA TRP TYR GLN GLN LYS SEQRES 4 D 214 PRO GLY LYS ALA PRO ASN LEU LEU ILE TYR ALA ALA SER SEQRES 5 D 214 THR LEU GLN SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 D 214 GLY SER GLY THR GLU PHE THR LEU THR ILE SER SER LEU SEQRES 7 D 214 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN LEU SEQRES 8 D 214 ASN SER ASP LEU TYR THR PHE GLY GLN GLY THR LYS LEU SEQRES 9 D 214 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 D 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 D 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 D 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 D 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 D 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 D 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 D 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 D 214 PHE ASN ARG GLY GLU CYS SEQRES 1 H 223 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 H 223 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 223 PHE THR PHE SER SER TYR ASP MET HIS TRP VAL ARG GLN SEQRES 4 H 223 THR THR GLY LYS GLY LEU GLU TRP VAL SER THR ILE GLY SEQRES 5 H 223 THR ALA GLY ASP THR TYR TYR PRO ASP SER VAL LYS GLY SEQRES 6 H 223 ARG PHE THR ILE SER ARG GLU ASP ALA LYS ASN SER LEU SEQRES 7 H 223 TYR LEU GLN MET ASN SER LEU ARG ALA GLY ASP THR ALA SEQRES 8 H 223 VAL TYR TYR CYS ALA ARG GLY ASP SER SER GLY TYR TYR SEQRES 9 H 223 TYR TYR PHE ASP TYR TRP GLY GLN GLY THR LEU LEU THR SEQRES 10 H 223 VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE PRO SEQRES 11 H 223 LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR ALA SEQRES 12 H 223 ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO SEQRES 13 H 223 VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY SEQRES 14 H 223 VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU SEQRES 15 H 223 TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SER SEQRES 16 H 223 LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS SEQRES 17 H 223 PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SEQRES 18 H 223 SER CYS SEQRES 1 L 215 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 L 215 ALA VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 L 215 GLN SER ILE GLY SER TYR LEU ASN TRP TYR GLN GLN LYS SEQRES 4 L 215 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR ALA ALA SER SEQRES 5 L 215 SER LEU GLN SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 215 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 215 GLN PRO GLU ASP PHE ALA ILE TYR TYR CYS GLN GLN SER SEQRES 8 L 215 TYR VAL SER PRO THR TYR THR PHE GLY PRO GLY THR LYS SEQRES 9 L 215 VAL ASP ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 L 215 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 L 215 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 L 215 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 L 215 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 L 215 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 L 215 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 L 215 GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SEQRES 17 L 215 SER PHE ASN ARG GLY GLU CYS SEQRES 1 M 209 THR ASN LEU CYS PRO PHE ASP GLU VAL PHE ASN ALA THR SEQRES 2 M 209 ARG PHE ALA SER VAL TYR ALA TRP ASN ARG LYS ARG ILE SEQRES 3 M 209 SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN LEU SEQRES 4 M 209 ALA PRO PHE PHE THR PHE LYS CYS TYR GLY VAL SER PRO SEQRES 5 M 209 THR LYS LEU ASN ASP LEU CYS PHE THR ASN VAL TYR ALA SEQRES 6 M 209 ASP SER PHE VAL ILE ARG GLY ASP GLU VAL ARG GLN ILE SEQRES 7 M 209 ALA PRO GLY GLN THR GLY ASN ILE ALA ASP TYR ASN TYR SEQRES 8 M 209 LYS LEU PRO ASP ASP PHE THR GLY CYS VAL ILE ALA TRP SEQRES 9 M 209 ASN SER ASN LYS LEU ASP SER LYS VAL SER GLY ASN TYR SEQRES 10 M 209 ASN TYR LEU TYR ARG LEU PHE ARG LYS SER ASN LEU LYS SEQRES 11 M 209 PRO PHE GLU ARG ASP ILE SER THR GLU ILE TYR GLN ALA SEQRES 12 M 209 GLY ASN LYS PRO CYS ASN GLY VAL ALA GLY PHE ASN CYS SEQRES 13 M 209 TYR PHE PRO LEU ARG SER TYR SER PHE ARG PRO THR TYR SEQRES 14 M 209 GLY VAL GLY HIS GLN PRO TYR ARG VAL VAL VAL LEU SER SEQRES 15 M 209 PHE GLU LEU LEU HIS ALA PRO ALA THR VAL CYS GLY PRO SEQRES 16 M 209 LYS LYS SER THR ASN LEU VAL LYS ASN LYS CYS VAL ASN SEQRES 17 M 209 PHE HET NAG E 1 14 HET NAG E 2 14 HET FUC E 3 10 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 8 NAG 2(C8 H15 N O6) FORMUL 8 FUC C6 H12 O5 HELIX 1 AA1 PRO A 28 TYR A 32 5 5 HELIX 2 AA2 ARG A 87 THR A 91 5 5 HELIX 3 AA3 LYS A 215 ASN A 218 5 4 HELIX 4 AA4 GLU B 80 PHE B 84 5 5 HELIX 5 AA5 SER B 121 LYS B 126 1 6 HELIX 6 AA6 SER B 182 HIS B 189 1 8 HELIX 7 AA7 ILE C 28 ASN C 32 5 5 HELIX 8 AA8 ARG C 86 THR C 90 5 5 HELIX 9 AA9 SER C 160 ALA C 162 5 3 HELIX 10 AB1 SER D 121 GLY D 128 1 8 HELIX 11 AB2 LYS D 183 GLU D 187 1 5 HELIX 12 AB3 ARG H 86 THR H 90 5 5 HELIX 13 AB4 PHE M 338 ASN M 343 1 6 HELIX 14 AB5 SER M 349 TRP M 353 5 5 HELIX 15 AB6 TYR M 365 ASN M 370 1 6 HELIX 16 AB7 SER M 383 LEU M 387 5 5 HELIX 17 AB8 ARG M 403 ILE M 410 5 8 HELIX 18 AB9 GLY M 416 ASN M 422 1 7 HELIX 19 AC1 SER M 438 SER M 443 1 6 HELIX 20 AC2 GLY M 502 GLN M 506 5 5 SHEET 1 AA1 4 GLN A 3 GLN A 6 0 SHEET 2 AA1 4 VAL A 18 SER A 25 -1 O LYS A 23 N VAL A 5 SHEET 3 AA1 4 THR A 78 LEU A 83 -1 O GLY A 79 N CYS A 22 SHEET 4 AA1 4 VAL A 68 ASP A 73 -1 N THR A 69 O GLU A 82 SHEET 1 AA2 5 THR A 58 TYR A 60 0 SHEET 2 AA2 5 LEU A 45 ILE A 51 -1 N TRP A 50 O ASN A 59 SHEET 3 AA2 5 GLY A 33 GLN A 39 -1 N ILE A 34 O ILE A 51 SHEET 4 AA2 5 ALA A 92 ASP A 99 -1 O VAL A 93 N GLN A 39 SHEET 5 AA2 5 ASN A 116 TRP A 117 -1 O ASN A 116 N ARG A 98 SHEET 1 AA3 5 THR A 58 TYR A 60 0 SHEET 2 AA3 5 LEU A 45 ILE A 51 -1 N TRP A 50 O ASN A 59 SHEET 3 AA3 5 GLY A 33 GLN A 39 -1 N ILE A 34 O ILE A 51 SHEET 4 AA3 5 ALA A 92 ASP A 99 -1 O VAL A 93 N GLN A 39 SHEET 5 AA3 5 THR A 121 VAL A 123 -1 O VAL A 123 N ALA A 92 SHEET 1 AA4 4 PHE A 136 LEU A 138 0 SHEET 2 AA4 4 ALA A 150 TYR A 159 -1 O LEU A 155 N PHE A 136 SHEET 3 AA4 4 TYR A 190 VAL A 198 -1 O LEU A 192 N VAL A 156 SHEET 4 AA4 4 VAL A 177 THR A 179 -1 N HIS A 178 O VAL A 195 SHEET 1 AA5 4 PHE A 136 LEU A 138 0 SHEET 2 AA5 4 ALA A 150 TYR A 159 -1 O LEU A 155 N PHE A 136 SHEET 3 AA5 4 TYR A 190 VAL A 198 -1 O LEU A 192 N VAL A 156 SHEET 4 AA5 4 VAL A 183 LEU A 184 -1 N VAL A 183 O SER A 191 SHEET 1 AA6 3 THR A 165 TRP A 168 0 SHEET 2 AA6 3 ILE A 209 HIS A 214 -1 O ASN A 211 N SER A 167 SHEET 3 AA6 3 THR A 219 LYS A 224 -1 O VAL A 221 N VAL A 212 SHEET 1 AA7 4 LEU B 4 SER B 7 0 SHEET 2 AA7 4 ALA B 19 ALA B 25 -1 O SER B 22 N SER B 7 SHEET 3 AA7 4 ASP B 71 ILE B 76 -1 O PHE B 72 N CYS B 23 SHEET 4 AA7 4 PHE B 63 SER B 68 -1 N SER B 64 O THR B 75 SHEET 1 AA8 2 SER B 12 LEU B 13 0 SHEET 2 AA8 2 GLU B 105 ILE B 106 1 O GLU B 105 N LEU B 13 SHEET 1 AA9 5 SER B 54 ARG B 55 0 SHEET 2 AA9 5 ARG B 46 TYR B 50 -1 N TYR B 50 O SER B 54 SHEET 3 AA9 5 LEU B 34 GLN B 39 -1 N TRP B 36 O LEU B 48 SHEET 4 AA9 5 VAL B 86 GLN B 91 -1 O VAL B 86 N GLN B 39 SHEET 5 AA9 5 THR B 97 PHE B 98 -1 O THR B 97 N GLN B 91 SHEET 1 AB1 5 SER B 54 ARG B 55 0 SHEET 2 AB1 5 ARG B 46 TYR B 50 -1 N TYR B 50 O SER B 54 SHEET 3 AB1 5 LEU B 34 GLN B 39 -1 N TRP B 36 O LEU B 48 SHEET 4 AB1 5 VAL B 86 GLN B 91 -1 O VAL B 86 N GLN B 39 SHEET 5 AB1 5 THR B 102 LYS B 103 -1 O THR B 102 N TYR B 87 SHEET 1 AB2 2 ALA B 130 PHE B 139 0 SHEET 2 AB2 2 TYR B 173 LEU B 181 -1 O SER B 177 N CYS B 134 SHEET 1 AB3 4 ALA B 153 LEU B 154 0 SHEET 2 AB3 4 LYS B 145 VAL B 150 -1 N VAL B 150 O ALA B 153 SHEET 3 AB3 4 VAL B 191 THR B 197 -1 O GLU B 195 N GLN B 147 SHEET 4 AB3 4 VAL B 205 ASN B 210 -1 O LYS B 207 N CYS B 194 SHEET 1 AB4 4 GLN C 3 SER C 7 0 SHEET 2 AB4 4 LEU C 18 SER C 25 -1 O ALA C 23 N VAL C 5 SHEET 3 AB4 4 THR C 77 MET C 82 -1 O LEU C 78 N CYS C 22 SHEET 4 AB4 4 PHE C 67 ASP C 72 -1 N THR C 68 O GLN C 81 SHEET 1 AB5 6 LEU C 11 ILE C 12 0 SHEET 2 AB5 6 THR C 111 VAL C 115 1 O THR C 114 N ILE C 12 SHEET 3 AB5 6 ALA C 91 ASP C 98 -1 N TYR C 93 O THR C 111 SHEET 4 AB5 6 TYR C 33 ALA C 40 -1 N GLN C 39 O VAL C 92 SHEET 5 AB5 6 GLY C 44 ILE C 51 -1 O GLU C 46 N ARG C 38 SHEET 6 AB5 6 THR C 57 TYR C 59 -1 O PHE C 58 N VAL C 50 SHEET 1 AB6 4 LEU C 11 ILE C 12 0 SHEET 2 AB6 4 THR C 111 VAL C 115 1 O THR C 114 N ILE C 12 SHEET 3 AB6 4 ALA C 91 ASP C 98 -1 N TYR C 93 O THR C 111 SHEET 4 AB6 4 MET C 104 TRP C 107 -1 O VAL C 106 N ARG C 97 SHEET 1 AB7 4 PHE C 126 LEU C 128 0 SHEET 2 AB7 4 LEU C 142 TYR C 149 -1 O GLY C 143 N LEU C 128 SHEET 3 AB7 4 SER C 184 VAL C 186 -1 O VAL C 186 N LEU C 142 SHEET 4 AB7 4 VAL C 167 THR C 169 -1 N HIS C 168 O VAL C 185 SHEET 1 AB8 4 PHE C 126 LEU C 128 0 SHEET 2 AB8 4 LEU C 142 TYR C 149 -1 O GLY C 143 N LEU C 128 SHEET 3 AB8 4 TYR C 180 LEU C 182 -1 O TYR C 180 N TYR C 149 SHEET 4 AB8 4 VAL C 173 LEU C 174 -1 N VAL C 173 O SER C 181 SHEET 1 AB9 3 VAL C 154 TRP C 158 0 SHEET 2 AB9 3 TYR C 198 HIS C 204 -1 O ASN C 201 N SER C 157 SHEET 3 AB9 3 LYS C 214 VAL C 215 -1 O VAL C 215 N TYR C 198 SHEET 1 AC1 4 LEU D 4 GLN D 6 0 SHEET 2 AC1 4 VAL D 19 ALA D 25 -1 O ARG D 24 N THR D 5 SHEET 3 AC1 4 GLU D 70 ILE D 75 -1 O LEU D 73 N ILE D 21 SHEET 4 AC1 4 PHE D 62 SER D 67 -1 N SER D 63 O THR D 74 SHEET 1 AC2 5 THR D 53 LEU D 54 0 SHEET 2 AC2 5 ASN D 45 TYR D 49 -1 N TYR D 49 O THR D 53 SHEET 3 AC2 5 ALA D 34 GLN D 38 -1 N GLN D 37 O ASN D 45 SHEET 4 AC2 5 THR D 85 GLN D 89 -1 O TYR D 87 N TYR D 36 SHEET 5 AC2 5 THR D 102 LYS D 103 -1 O THR D 102 N TYR D 86 SHEET 1 AC3 4 SER D 114 PHE D 118 0 SHEET 2 AC3 4 THR D 129 ASN D 137 -1 O LEU D 135 N PHE D 116 SHEET 3 AC3 4 SER D 174 SER D 182 -1 O LEU D 175 N LEU D 136 SHEET 4 AC3 4 SER D 159 VAL D 163 -1 N SER D 162 O SER D 176 SHEET 1 AC4 3 LYS D 145 GLN D 147 0 SHEET 2 AC4 3 VAL D 191 THR D 197 -1 O THR D 197 N LYS D 145 SHEET 3 AC4 3 VAL D 205 ASN D 210 -1 O PHE D 209 N TYR D 192 SHEET 1 AC5 4 GLN H 3 SER H 7 0 SHEET 2 AC5 4 SER H 17 SER H 25 -1 O ALA H 23 N VAL H 5 SHEET 3 AC5 4 SER H 77 ASN H 83 -1 O MET H 82 N LEU H 18 SHEET 4 AC5 4 PHE H 67 GLU H 72 -1 N THR H 68 O GLN H 81 SHEET 1 AC6 2 LEU H 11 VAL H 12 0 SHEET 2 AC6 2 THR H 117 VAL H 118 1 O THR H 117 N VAL H 12 SHEET 1 AC7 5 THR H 57 TYR H 58 0 SHEET 2 AC7 5 GLY H 44 ILE H 51 -1 N THR H 50 O TYR H 58 SHEET 3 AC7 5 ASP H 33 THR H 40 -1 N ARG H 38 O GLU H 46 SHEET 4 AC7 5 VAL H 92 SER H 101 -1 O TYR H 94 N VAL H 37 SHEET 5 AC7 5 TYR H 104 TRP H 110 -1 O TYR H 106 N ASP H 99 SHEET 1 AC8 5 THR H 57 TYR H 58 0 SHEET 2 AC8 5 GLY H 44 ILE H 51 -1 N THR H 50 O TYR H 58 SHEET 3 AC8 5 ASP H 33 THR H 40 -1 N ARG H 38 O GLU H 46 SHEET 4 AC8 5 VAL H 92 SER H 101 -1 O TYR H 94 N VAL H 37 SHEET 5 AC8 5 THR H 114 LEU H 115 -1 O THR H 114 N TYR H 93 SHEET 1 AC9 4 MET L 4 SER L 7 0 SHEET 2 AC9 4 VAL L 19 ALA L 25 -1 O THR L 22 N SER L 7 SHEET 3 AC9 4 ASP L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 4 AC9 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AD1 6 SER L 10 ALA L 13 0 SHEET 2 AD1 6 THR L 103 ILE L 107 1 O ASP L 106 N ALA L 13 SHEET 3 AD1 6 ALA L 84 GLN L 90 -1 N TYR L 86 O THR L 103 SHEET 4 AD1 6 LEU L 33 GLN L 38 -1 N TYR L 36 O TYR L 87 SHEET 5 AD1 6 PRO L 44 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 AD1 6 SER L 53 LEU L 54 -1 O SER L 53 N TYR L 49 SHEET 1 AD2 4 SER L 10 ALA L 13 0 SHEET 2 AD2 4 THR L 103 ILE L 107 1 O ASP L 106 N ALA L 13 SHEET 3 AD2 4 ALA L 84 GLN L 90 -1 N TYR L 86 O THR L 103 SHEET 4 AD2 4 THR L 98 PHE L 99 -1 O THR L 98 N GLN L 90 SHEET 1 AD3 6 VAL L 93 SER L 94 0 SHEET 2 AD3 6 THR M 376 TYR M 380 -1 O CYS M 379 N SER L 94 SHEET 3 AD3 6 GLY M 431 ASN M 437 -1 O VAL M 433 N LYS M 378 SHEET 4 AD3 6 TYR M 508 GLU M 516 -1 O VAL M 511 N ILE M 434 SHEET 5 AD3 6 ASN M 394 ILE M 402 -1 N PHE M 400 O VAL M 510 SHEET 6 AD3 6 ASN M 354 ILE M 358 -1 N ILE M 358 O VAL M 395 SHEET 1 AD4 2 LEU M 452 ARG M 454 0 SHEET 2 AD4 2 LEU M 492 SER M 494 -1 O ARG M 493 N TYR M 453 SHEET 1 AD5 2 TYR M 473 GLN M 474 0 SHEET 2 AD5 2 CYS M 488 TYR M 489 -1 O TYR M 489 N TYR M 473 SSBOND 1 CYS A 22 CYS A 96 1555 1555 2.03 SSBOND 2 CYS A 154 CYS A 210 1555 1555 2.04 SSBOND 3 CYS B 23 CYS B 89 1555 1555 2.04 SSBOND 4 CYS B 134 CYS B 194 1555 1555 2.04 SSBOND 5 CYS C 22 CYS C 95 1555 1555 2.03 SSBOND 6 CYS C 144 CYS C 200 1555 1555 2.03 SSBOND 7 CYS D 23 CYS D 88 1555 1555 2.05 SSBOND 8 CYS D 134 CYS D 194 1555 1555 2.03 SSBOND 9 CYS H 22 CYS H 95 1555 1555 2.04 SSBOND 10 CYS L 23 CYS L 88 1555 1555 2.05 SSBOND 11 CYS M 336 CYS M 361 1555 1555 2.03 SSBOND 12 CYS M 379 CYS M 432 1555 1555 2.04 SSBOND 13 CYS M 391 CYS M 525 1555 1555 2.03 SSBOND 14 CYS M 480 CYS M 488 1555 1555 2.03 LINK ND2 ASN M 343 C1 NAG E 1 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 LINK O6 NAG E 1 C1 FUC E 3 1555 1555 1.43 CISPEP 1 PHE A 160 PRO A 161 0 3.69 CISPEP 2 SER B 7 PRO B 8 0 -8.06 CISPEP 3 TYR B 140 PRO B 141 0 0.94 CISPEP 4 PHE C 150 PRO C 151 0 -3.27 CISPEP 5 GLU C 152 PRO C 153 0 2.41 CISPEP 6 SER L 7 PRO L 8 0 -8.28 CISPEP 7 SER L 94 PRO L 95 0 -5.37 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000