data_7X7G # _entry.id 7X7G # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7X7G pdb_00007x7g 10.2210/pdb7x7g/pdb WWPDB D_1300027935 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7X7G _pdbx_database_status.recvd_initial_deposition_date 2022-03-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ngo, K.H.' 1 0000-0001-5125-1270 'Liew, C.W.' 2 0000-0002-4343-818X 'Lattmann, S.' 3 0000-0002-4639-4602 'Winnerdy, F.R.' 4 0000-0002-5010-4719 'Phan, A.T.' 5 0000-0002-4970-3861 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biochem.Biophys.Res.Commun. _citation.journal_id_ASTM BBRCA9 _citation.journal_id_CSD 0146 _citation.journal_id_ISSN 1090-2104 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 613 _citation.language ? _citation.page_first 153 _citation.page_last 158 _citation.title 'Crystal structures of an HIV-1 integrase aptamer: Formation of a water-mediated A.G.G.G.G pentad in an interlocked G-quadruplex.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.bbrc.2022.04.020 _citation.pdbx_database_id_PubMed 35561583 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ngo, K.H.' 1 ? primary 'Liew, C.W.' 2 ? primary 'Lattmann, S.' 3 ? primary 'Winnerdy, F.R.' 4 ? primary 'Phan, A.T.' 5 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 102.899 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7X7G _cell.details ? _cell.formula_units_Z ? _cell.length_a 26.173 _cell.length_a_esd ? _cell.length_b 31.247 _cell.length_b_esd ? _cell.length_c 49.893 _cell.length_c_esd ? _cell.volume 39774.197 _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7X7G _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*GP*GP*GP*TP*GP*GP*GP*AP*GP*GP*TP*GP*GP*GP*T)-3') ; 5131.297 2 ? ? ? ? 2 non-polymer syn 'POTASSIUM ION' 39.098 5 ? ? ? ? 3 water nat water 18.015 39 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DG)(DG)(DG)(DG)(DT)(DG)(DG)(DG)(DA)(DG)(DG)(DT)(DG)(DG)(DG)(DT)' _entity_poly.pdbx_seq_one_letter_code_can GGGGTGGGAGGTGGGT _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DG n 1 4 DG n 1 5 DT n 1 6 DG n 1 7 DG n 1 8 DG n 1 9 DA n 1 10 DG n 1 11 DG n 1 12 DT n 1 13 DG n 1 14 DG n 1 15 DG n 1 16 DT n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 16 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 7X7G _struct_ref.pdbx_db_accession 7X7G _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7X7G A 1 ? 16 ? 7X7G 1 ? 16 ? 1 16 2 1 7X7G B 1 ? 16 ? 7X7G 1 ? 16 ? 1 16 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7X7G _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.94 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 36.53 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.01 M magnesium chloride hexahydrate, 0.05 M HEPES sodium pH 7.5, 15% v/v (+/-)-2-methyl-2,4-pentanediol, 0.0015 M spermine' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 90 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-11-19 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.95 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'AUSTRALIAN SYNCHROTRON BEAMLINE MX1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.95 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline MX1 _diffrn_source.pdbx_synchrotron_site 'Australian Synchrotron' # _reflns.B_iso_Wilson_estimate 27.47 _reflns.entry_id 7X7G _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.19 _reflns.d_resolution_low 48.63 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 8264 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.56 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 2.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 9.82 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.19 _reflns_shell.d_res_low 2.268 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 4149 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.985 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 30.87 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7X7G _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.19 _refine.ls_d_res_low 48.63 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 7748 _refine.ls_number_reflns_R_free 765 _refine.ls_number_reflns_R_work 6983 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.28 _refine.ls_percent_reflns_R_free 9.87 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2575 _refine.ls_R_factor_R_free 0.2685 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2560 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.38 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1Y8D _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 37.5678 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1756 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.19 _refine_hist.d_res_low 48.63 _refine_hist.number_atoms_solvent 39 _refine_hist.number_atoms_total 728 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 684 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0090 ? 770 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 2.0230 ? 1190 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.1891 ? 126 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0051 ? 32 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 33.0353 ? 306 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.19 2.36 . . 159 1428 98.08 . . . 0.3371 . 0.3312 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.36 2.59 . . 157 1401 98.30 . . . 0.2984 . 0.2797 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.59 2.97 . . 155 1364 96.26 . . . 0.3196 . 0.3098 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.97 3.74 . . 148 1408 96.77 . . . 0.2493 . 0.2585 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.74 48.63 . . 146 1382 96.95 . . . 0.2212 . 0.2054 . . . . . . . . . . . # _struct.entry_id 7X7G _struct.title 'Crystal structure of a dimeric interlocked parallel G-quadruplex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7X7G _struct_keywords.text 'G-quadruplex, interlocked, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 3 ? I N N 3 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 1 O6 ? ? ? 1_555 E K . K ? ? A DG 1 A K 103 1_555 ? ? ? ? ? ? ? 2.836 ? ? metalc2 metalc ? ? A DG 1 O6 ? ? ? 1_555 F K . K ? ? A DG 1 B K 101 1_555 ? ? ? ? ? ? ? 2.876 ? ? metalc3 metalc ? ? A DG 2 O6 ? ? ? 1_555 D K . K ? ? A DG 2 A K 102 1_555 ? ? ? ? ? ? ? 2.651 ? ? metalc4 metalc ? ? A DG 2 O6 ? ? ? 1_555 E K . K ? ? A DG 2 A K 103 1_555 ? ? ? ? ? ? ? 2.942 ? ? metalc5 metalc ? ? A DG 3 O6 ? ? ? 1_555 C K . K ? ? A DG 3 A K 101 1_555 ? ? ? ? ? ? ? 2.829 ? ? metalc6 metalc ? ? A DG 3 O6 ? ? ? 1_555 D K . K ? ? A DG 3 A K 102 1_555 ? ? ? ? ? ? ? 2.734 ? ? metalc7 metalc ? ? A DG 4 O6 ? ? ? 1_555 C K . K ? ? A DG 4 A K 101 1_555 ? ? ? ? ? ? ? 2.780 ? ? metalc8 metalc ? ? A DG 6 O6 ? ? ? 1_555 D K . K ? ? A DG 6 A K 102 1_555 ? ? ? ? ? ? ? 2.933 ? ? metalc9 metalc ? ? A DG 6 O6 ? ? ? 1_555 E K . K ? ? A DG 6 A K 103 1_555 ? ? ? ? ? ? ? 2.720 ? ? metalc10 metalc ? ? A DG 7 O6 ? ? ? 1_555 C K . K ? ? A DG 7 A K 101 1_555 ? ? ? ? ? ? ? 2.845 ? ? metalc11 metalc ? ? A DG 7 O6 ? ? ? 1_555 D K . K ? ? A DG 7 A K 102 1_555 ? ? ? ? ? ? ? 2.731 ? ? metalc12 metalc ? ? A DG 8 O6 ? ? ? 1_555 C K . K ? ? A DG 8 A K 101 1_555 ? ? ? ? ? ? ? 2.667 ? ? metalc13 metalc ? ? A DG 10 O6 ? ? ? 1_555 C K . K ? ? A DG 10 A K 101 1_555 ? ? ? ? ? ? ? 2.859 ? ? metalc14 metalc ? ? A DG 10 O6 ? ? ? 1_555 D K . K ? ? A DG 10 A K 102 1_555 ? ? ? ? ? ? ? 2.609 ? ? metalc15 metalc ? ? A DG 11 O6 ? ? ? 1_555 C K . K ? ? A DG 11 A K 101 1_555 ? ? ? ? ? ? ? 2.769 ? ? metalc16 metalc ? ? A DG 13 O6 ? ? ? 1_555 D K . K ? ? A DG 13 A K 102 1_555 ? ? ? ? ? ? ? 2.949 ? ? metalc17 metalc ? ? A DG 13 O6 ? ? ? 1_555 E K . K ? ? A DG 13 A K 103 1_555 ? ? ? ? ? ? ? 2.898 ? ? metalc18 metalc ? ? A DG 14 O6 ? ? ? 1_555 C K . K ? ? A DG 14 A K 101 1_555 ? ? ? ? ? ? ? 2.837 ? ? metalc19 metalc ? ? A DG 14 O6 ? ? ? 1_555 D K . K ? ? A DG 14 A K 102 1_555 ? ? ? ? ? ? ? 2.739 ? ? metalc20 metalc ? ? A DG 15 O6 ? ? ? 1_555 C K . K ? ? A DG 15 A K 101 1_555 ? ? ? ? ? ? ? 2.755 ? ? metalc21 metalc ? ? D K . K ? ? ? 1_555 B DG 1 O6 ? ? A K 102 B DG 1 1_555 ? ? ? ? ? ? ? 2.778 ? ? metalc22 metalc ? ? E K . K ? ? ? 1_555 B DG 1 O6 ? ? A K 103 B DG 1 1_555 ? ? ? ? ? ? ? 2.881 ? ? metalc23 metalc ? ? E K . K ? ? ? 1_555 B DG 2 O6 ? ? A K 103 B DG 2 1_555 ? ? ? ? ? ? ? 2.858 ? ? metalc24 metalc ? ? E K . K ? ? ? 1_555 B DG 6 O6 ? ? A K 103 B DG 6 1_555 ? ? ? ? ? ? ? 2.648 ? ? metalc25 metalc ? ? E K . K ? ? ? 1_555 B DG 13 O6 ? ? A K 103 B DG 13 1_555 ? ? ? ? ? ? ? 2.881 ? ? metalc26 metalc ? ? B DG 2 O6 ? ? ? 1_555 F K . K ? ? B DG 2 B K 101 1_555 ? ? ? ? ? ? ? 2.863 ? ? metalc27 metalc ? ? B DG 3 O6 ? ? ? 1_555 F K . K ? ? B DG 3 B K 101 1_555 ? ? ? ? ? ? ? 2.807 ? ? metalc28 metalc ? ? B DG 3 O6 ? ? ? 1_555 G K . K ? ? B DG 3 B K 102 1_555 ? ? ? ? ? ? ? 2.929 ? ? metalc29 metalc ? ? B DG 4 O6 ? ? ? 1_555 G K . K ? ? B DG 4 B K 102 1_555 ? ? ? ? ? ? ? 2.814 ? ? metalc30 metalc ? ? B DG 6 O6 ? ? ? 1_555 F K . K ? ? B DG 6 B K 101 1_555 ? ? ? ? ? ? ? 3.054 ? ? metalc31 metalc ? ? B DG 7 O6 ? ? ? 1_555 F K . K ? ? B DG 7 B K 101 1_555 ? ? ? ? ? ? ? 2.735 ? ? metalc32 metalc ? ? B DG 7 O6 ? ? ? 1_555 G K . K ? ? B DG 7 B K 102 1_555 ? ? ? ? ? ? ? 3.050 ? ? metalc33 metalc ? ? B DG 8 O6 ? ? ? 1_555 G K . K ? ? B DG 8 B K 102 1_555 ? ? ? ? ? ? ? 2.675 ? ? metalc34 metalc ? ? B DG 10 O6 ? ? ? 1_555 F K . K ? ? B DG 10 B K 101 1_555 ? ? ? ? ? ? ? 2.636 ? ? metalc35 metalc ? ? B DG 10 O6 ? ? ? 1_555 G K . K ? ? B DG 10 B K 102 1_555 ? ? ? ? ? ? ? 3.092 ? ? metalc36 metalc ? ? B DG 11 O6 ? ? ? 1_555 G K . K ? ? B DG 11 B K 102 1_555 ? ? ? ? ? ? ? 2.754 ? ? metalc37 metalc ? ? B DG 13 O6 ? ? ? 1_555 F K . K ? ? B DG 13 B K 101 1_555 ? ? ? ? ? ? ? 2.983 ? ? metalc38 metalc ? ? B DG 14 O6 ? ? ? 1_555 F K . K ? ? B DG 14 B K 101 1_555 ? ? ? ? ? ? ? 2.775 ? ? metalc39 metalc ? ? B DG 14 O6 ? ? ? 1_555 G K . K ? ? B DG 14 B K 102 1_555 ? ? ? ? ? ? ? 3.012 ? ? metalc40 metalc ? ? B DG 15 O6 ? ? ? 1_555 G K . K ? ? B DG 15 B K 102 1_555 ? ? ? ? ? ? ? 2.774 ? ? hydrog1 hydrog ? ? A DG 1 N7 ? ? ? 1_555 B DG 6 N2 ? ? A DG 1 B DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog2 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DG 6 N1 ? ? A DG 1 B DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog3 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DG 13 O6 ? ? A DG 1 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DG 13 N7 ? ? A DG 1 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DG 6 O6 ? ? A DG 2 A DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DG 6 N7 ? ? A DG 2 A DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A DG 2 N7 ? ? ? 1_555 A DG 13 N2 ? ? A DG 2 A DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DG 13 N1 ? ? A DG 2 A DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DG 7 O6 ? ? A DG 3 A DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DG 7 N7 ? ? A DG 3 A DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog11 hydrog ? ? A DG 3 N7 ? ? ? 1_555 A DG 14 N2 ? ? A DG 3 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog12 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DG 14 N1 ? ? A DG 3 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DG 8 O6 ? ? A DG 4 A DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DG 8 N7 ? ? A DG 4 A DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A DG 4 N7 ? ? ? 1_555 A DG 15 N2 ? ? A DG 4 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DG 15 N1 ? ? A DG 4 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DG 1 O6 ? ? A DG 6 B DG 1 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DG 1 N7 ? ? A DG 6 B DG 1 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A DG 7 N2 ? ? ? 1_555 A DA 9 N7 ? ? A DG 7 A DA 9 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog20 hydrog ? ? A DG 7 N3 ? ? ? 1_555 A DA 9 N6 ? ? A DG 7 A DA 9 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog21 hydrog ? ? A DG 7 N1 ? ? ? 1_555 A DG 10 O6 ? ? A DG 7 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A DG 7 N2 ? ? ? 1_555 A DG 10 N7 ? ? A DG 7 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A DG 8 N1 ? ? ? 1_555 A DG 11 O6 ? ? A DG 8 A DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? A DG 8 N2 ? ? ? 1_555 A DG 11 N7 ? ? A DG 8 A DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DG 14 O6 ? ? A DG 10 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog26 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DG 14 N7 ? ? A DG 10 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog27 hydrog ? ? A DG 11 N1 ? ? ? 1_555 A DG 15 O6 ? ? A DG 11 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog28 hydrog ? ? A DG 11 N2 ? ? ? 1_555 A DG 15 N7 ? ? A DG 11 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog29 hydrog ? ? A DG 13 N7 ? ? ? 1_555 B DG 1 N2 ? ? A DG 13 B DG 1 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog30 hydrog ? ? A DG 13 O6 ? ? ? 1_555 B DG 1 N1 ? ? A DG 13 B DG 1 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog31 hydrog ? ? B DG 2 N1 ? ? ? 1_555 B DG 6 O6 ? ? B DG 2 B DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog32 hydrog ? ? B DG 2 N2 ? ? ? 1_555 B DG 6 N7 ? ? B DG 2 B DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog33 hydrog ? ? B DG 2 N7 ? ? ? 1_555 B DG 13 N2 ? ? B DG 2 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog34 hydrog ? ? B DG 2 O6 ? ? ? 1_555 B DG 13 N1 ? ? B DG 2 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog35 hydrog ? ? B DG 3 N1 ? ? ? 1_555 B DG 7 O6 ? ? B DG 3 B DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog36 hydrog ? ? B DG 3 N2 ? ? ? 1_555 B DG 7 N7 ? ? B DG 3 B DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog37 hydrog ? ? B DG 3 N7 ? ? ? 1_555 B DG 14 N2 ? ? B DG 3 B DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog38 hydrog ? ? B DG 3 O6 ? ? ? 1_555 B DG 14 N1 ? ? B DG 3 B DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog39 hydrog ? ? B DG 4 N1 ? ? ? 1_555 B DG 8 O6 ? ? B DG 4 B DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog40 hydrog ? ? B DG 4 N2 ? ? ? 1_555 B DG 8 N7 ? ? B DG 4 B DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog41 hydrog ? ? B DG 4 N7 ? ? ? 1_555 B DG 15 N2 ? ? B DG 4 B DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog42 hydrog ? ? B DG 4 O6 ? ? ? 1_555 B DG 15 N1 ? ? B DG 4 B DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog43 hydrog ? ? B DG 7 N2 ? ? ? 1_555 B DA 9 N7 ? ? B DG 7 B DA 9 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog44 hydrog ? ? B DG 7 N3 ? ? ? 1_555 B DA 9 N6 ? ? B DG 7 B DA 9 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog45 hydrog ? ? B DG 7 N1 ? ? ? 1_555 B DG 10 O6 ? ? B DG 7 B DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog46 hydrog ? ? B DG 7 N2 ? ? ? 1_555 B DG 10 N7 ? ? B DG 7 B DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog47 hydrog ? ? B DG 8 N1 ? ? ? 1_555 B DG 11 O6 ? ? B DG 8 B DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog48 hydrog ? ? B DG 8 N2 ? ? ? 1_555 B DG 11 N7 ? ? B DG 8 B DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog49 hydrog ? ? B DG 10 N1 ? ? ? 1_555 B DG 14 O6 ? ? B DG 10 B DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog50 hydrog ? ? B DG 10 N2 ? ? ? 1_555 B DG 14 N7 ? ? B DG 10 B DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog51 hydrog ? ? B DG 11 N1 ? ? ? 1_555 B DG 15 O6 ? ? B DG 11 B DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog52 hydrog ? ? B DG 11 N2 ? ? ? 1_555 B DG 15 N7 ? ? B DG 11 B DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _atom_sites.entry_id 7X7G _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.038207 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.008750 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.032003 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020562 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? K ? ? 16.37977 2.54835 ? ? 4.54127 84.28225 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DG 4 4 4 DG DG A . n A 1 5 DT 5 5 5 DT DT A . n A 1 6 DG 6 6 6 DG DG A . n A 1 7 DG 7 7 7 DG DG A . n A 1 8 DG 8 8 8 DG DG A . n A 1 9 DA 9 9 9 DA DA A . n A 1 10 DG 10 10 10 DG DG A . n A 1 11 DG 11 11 11 DG DG A . n A 1 12 DT 12 12 12 DT DT A . n A 1 13 DG 13 13 13 DG DG A . n A 1 14 DG 14 14 14 DG DG A . n A 1 15 DG 15 15 15 DG DG A . n A 1 16 DT 16 16 16 DT DT A . n B 1 1 DG 1 1 1 DG DG B . n B 1 2 DG 2 2 2 DG DG B . n B 1 3 DG 3 3 3 DG DG B . n B 1 4 DG 4 4 4 DG DG B . n B 1 5 DT 5 5 5 DT DT B . n B 1 6 DG 6 6 6 DG DG B . n B 1 7 DG 7 7 7 DG DG B . n B 1 8 DG 8 8 8 DG DG B . n B 1 9 DA 9 9 9 DA DA B . n B 1 10 DG 10 10 10 DG DG B . n B 1 11 DG 11 11 11 DG DG B . n B 1 12 DT 12 12 12 DT DT B . n B 1 13 DG 13 13 13 DG DG B . n B 1 14 DG 14 14 14 DG DG B . n B 1 15 DG 15 15 15 DG DG B . n B 1 16 DT 16 16 16 DT DT B . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email Phantuan@ntu.edu.sg _pdbx_contact_author.name_first Tuan _pdbx_contact_author.name_last Phan _pdbx_contact_author.name_mi Anh _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-4970-3861 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K 1 101 1 K K A . D 2 K 1 102 2 K K A . E 2 K 1 103 3 K K A . F 2 K 1 101 4 K K B . G 2 K 1 102 5 K K B . H 3 HOH 1 201 24 HOH HOH A . H 3 HOH 2 202 10 HOH HOH A . H 3 HOH 3 203 40 HOH HOH A . H 3 HOH 4 204 33 HOH HOH A . H 3 HOH 5 205 7 HOH HOH A . H 3 HOH 6 206 5 HOH HOH A . H 3 HOH 7 207 17 HOH HOH A . H 3 HOH 8 208 39 HOH HOH A . H 3 HOH 9 209 6 HOH HOH A . H 3 HOH 10 210 25 HOH HOH A . H 3 HOH 11 211 41 HOH HOH A . H 3 HOH 12 212 9 HOH HOH A . H 3 HOH 13 213 19 HOH HOH A . H 3 HOH 14 214 2 HOH HOH A . H 3 HOH 15 215 8 HOH HOH A . H 3 HOH 16 216 16 HOH HOH A . H 3 HOH 17 217 28 HOH HOH A . H 3 HOH 18 218 43 HOH HOH A . I 3 HOH 1 201 42 HOH HOH B . I 3 HOH 2 202 38 HOH HOH B . I 3 HOH 3 203 4 HOH HOH B . I 3 HOH 4 204 13 HOH HOH B . I 3 HOH 5 205 3 HOH HOH B . I 3 HOH 6 206 11 HOH HOH B . I 3 HOH 7 207 15 HOH HOH B . I 3 HOH 8 208 32 HOH HOH B . I 3 HOH 9 209 21 HOH HOH B . I 3 HOH 10 210 23 HOH HOH B . I 3 HOH 11 211 12 HOH HOH B . I 3 HOH 12 212 1 HOH HOH B . I 3 HOH 13 213 35 HOH HOH B . I 3 HOH 14 214 29 HOH HOH B . I 3 HOH 15 215 30 HOH HOH B . I 3 HOH 16 216 18 HOH HOH B . I 3 HOH 17 217 14 HOH HOH B . I 3 HOH 18 218 27 HOH HOH B . I 3 HOH 19 219 46 HOH HOH B . I 3 HOH 20 220 31 HOH HOH B . I 3 HOH 21 221 37 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2370 ? 1 MORE 7 ? 1 'SSA (A^2)' 5160 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 2 ? A DG 2 ? 1_555 77.5 ? 2 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 101.3 ? 3 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 69.0 ? 4 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 119.1 ? 5 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 67.5 ? 6 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 109.8 ? 7 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 169.3 ? 8 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 99.4 ? 9 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 68.2 ? 10 O6 ? A DG 13 ? A DG 13 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 67.9 ? 11 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 108.4 ? 12 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 167.1 ? 13 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 119.6 ? 14 O6 ? A DG 13 ? A DG 13 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 99.7 ? 15 O6 ? B DG 1 ? B DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 76.8 ? 16 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 71.6 ? 17 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 118.4 ? 18 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 66.8 ? 19 O6 ? A DG 13 ? A DG 13 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 169.3 ? 20 O6 ? B DG 1 ? B DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 101.7 ? 21 O6 ? B DG 2 ? B DG 2 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 74.5 ? 22 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 71.4 ? 23 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 101.8 ? 24 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 169.7 ? 25 O6 ? A DG 13 ? A DG 13 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 69.3 ? 26 O6 ? B DG 1 ? B DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 119.3 ? 27 O6 ? B DG 2 ? B DG 2 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 70.3 ? 28 O6 ? B DG 6 ? B DG 6 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 116.0 ? 29 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 107.2 ? 30 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 3 ? B DG 3 ? 1_555 154.4 ? 31 O6 ? B DG 2 ? B DG 2 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 3 ? B DG 3 ? 1_555 76.3 ? 32 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 65.5 ? 33 O6 ? B DG 2 ? B DG 2 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 68.6 ? 34 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 93.7 ? 35 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 87.5 ? 36 O6 ? B DG 2 ? B DG 2 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 133.9 ? 37 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 73.4 ? 38 O6 ? B DG 6 ? B DG 6 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 79.5 ? 39 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 73.7 ? 40 O6 ? B DG 2 ? B DG 2 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 149.5 ? 41 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 116.5 ? 42 O6 ? B DG 6 ? B DG 6 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 132.9 ? 43 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 76.3 ? 44 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 69.4 ? 45 O6 ? B DG 2 ? B DG 2 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 68.8 ? 46 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 132.6 ? 47 O6 ? B DG 6 ? B DG 6 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 101.9 ? 48 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 153.1 ? 49 O6 ? B DG 10 ? B DG 10 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 83.9 ? 50 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 14 ? B DG 14 ? 1_555 133.9 ? 51 O6 ? B DG 2 ? B DG 2 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 14 ? B DG 14 ? 1_555 84.2 ? 52 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 14 ? B DG 14 ? 1_555 71.2 ? 53 O6 ? B DG 6 ? B DG 6 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 14 ? B DG 14 ? 1_555 151.5 ? 54 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 14 ? B DG 14 ? 1_555 116.9 ? 55 O6 ? B DG 10 ? B DG 10 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 14 ? B DG 14 ? 1_555 75.3 ? 56 O6 ? B DG 13 ? B DG 13 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B DG 14 ? B DG 14 ? 1_555 74.2 ? 57 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 3 ? A DG 3 ? 1_555 80.4 ? 58 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 70.1 ? 59 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 91.0 ? 60 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 137.4 ? 61 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 67.2 ? 62 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 83.1 ? 63 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 149.2 ? 64 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 109.5 ? 65 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 136.3 ? 66 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 71.1 ? 67 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 70.6 ? 68 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 140.7 ? 69 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 102.8 ? 70 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 150.0 ? 71 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 85.4 ? 72 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 85.4 ? 73 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 72.0 ? 74 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 152.4 ? 75 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 108.7 ? 76 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 71.0 ? 77 O6 ? A DG 13 ? A DG 13 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 79.6 ? 78 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 109.7 ? 79 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 148.8 ? 80 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 66.7 ? 81 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 87.7 ? 82 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 77.4 ? 83 O6 ? A DG 13 ? A DG 13 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 68.5 ? 84 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 136.4 ? 85 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 4 ? A DG 4 ? 1_555 70.3 ? 86 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 64.4 ? 87 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 91.3 ? 88 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 8 ? A DG 8 ? 1_555 122.0 ? 89 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 8 ? A DG 8 ? 1_555 72.8 ? 90 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 8 ? A DG 8 ? 1_555 73.4 ? 91 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 100.2 ? 92 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 157.1 ? 93 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 66.0 ? 94 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 96.8 ? 95 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 160.1 ? 96 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 117.2 ? 97 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 130.5 ? 98 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 77.6 ? 99 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 78.9 ? 100 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 69.2 ? 101 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 125.1 ? 102 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 102.9 ? 103 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 162.0 ? 104 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 66.2 ? 105 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 92.8 ? 106 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 92.4 ? 107 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 74.5 ? 108 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 156.2 ? 109 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 118.6 ? 110 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 127.7 ? 111 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 73.3 ? 112 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 71.8 ? 113 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 4 ? B DG 4 ? 1_555 70.6 ? 114 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 67.2 ? 115 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 89.7 ? 116 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 8 ? B DG 8 ? 1_555 127.1 ? 117 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 8 ? B DG 8 ? 1_555 76.6 ? 118 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 8 ? B DG 8 ? 1_555 72.5 ? 119 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 100.5 ? 120 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 154.9 ? 121 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 65.4 ? 122 O6 ? B DG 8 ? B DG 8 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 92.1 ? 123 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 153.3 ? 124 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 122.3 ? 125 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 130.8 ? 126 O6 ? B DG 8 ? B DG 8 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 79.6 ? 127 O6 ? B DG 10 ? B DG 10 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 76.3 ? 128 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 14 ? B DG 14 ? 1_555 66.3 ? 129 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 14 ? B DG 14 ? 1_555 126.2 ? 130 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 14 ? B DG 14 ? 1_555 101.5 ? 131 O6 ? B DG 8 ? B DG 8 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 14 ? B DG 14 ? 1_555 157.0 ? 132 O6 ? B DG 10 ? B DG 10 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 14 ? B DG 14 ? 1_555 65.6 ? 133 O6 ? B DG 11 ? B DG 11 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 14 ? B DG 14 ? 1_555 88.8 ? 134 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 84.8 ? 135 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 74.5 ? 136 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 151.3 ? 137 O6 ? B DG 8 ? B DG 8 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 124.5 ? 138 O6 ? B DG 10 ? B DG 10 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 129.3 ? 139 O6 ? B DG 11 ? B DG 11 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 77.6 ? 140 O6 ? B DG 14 ? B DG 14 ? 1_555 K ? G K . ? B K 102 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 71.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-04-20 2 'Structure model' 1 1 2023-06-07 3 'Structure model' 1 2 2023-11-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.pdbx_database_id_DOI' 5 2 'Structure model' '_citation.pdbx_database_id_PubMed' 6 2 'Structure model' '_citation.title' # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -x,y+1/2,-z # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.19.2-4158-000 1 ? 'data processing' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.19.2-4158-000 4 # _pdbx_entry_details.entry_id 7X7G _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 "O3'" _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 DT _pdbx_validate_symm_contact.auth_seq_id_1 16 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 C7 _pdbx_validate_symm_contact.auth_asym_id_2 B _pdbx_validate_symm_contact.auth_comp_id_2 DT _pdbx_validate_symm_contact.auth_seq_id_2 16 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 1_455 _pdbx_validate_symm_contact.dist 1.12 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" A DG 3 ? ? "O3'" A DG 3 ? ? P A DG 4 ? ? 106.45 119.70 -13.25 1.20 Y 2 1 "C3'" A DT 5 ? ? "O3'" A DT 5 ? ? P A DG 6 ? ? 112.02 119.70 -7.68 1.20 Y 3 1 "C3'" A DG 6 ? ? "O3'" A DG 6 ? ? P A DG 7 ? ? 111.38 119.70 -8.32 1.20 Y 4 1 "C3'" A DA 9 ? ? "O3'" A DA 9 ? ? P A DG 10 ? ? 108.28 119.70 -11.42 1.20 Y 5 1 "C3'" A DG 10 ? ? "O3'" A DG 10 ? ? P A DG 11 ? ? 108.58 119.70 -11.12 1.20 Y 6 1 "C3'" A DT 12 ? ? "O3'" A DT 12 ? ? P A DG 13 ? ? 111.79 119.70 -7.91 1.20 Y 7 1 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 110.48 108.30 2.18 0.30 N 8 1 "C3'" B DT 5 ? ? "O3'" B DT 5 ? ? P B DG 6 ? ? 112.31 119.70 -7.39 1.20 Y 9 1 "C3'" B DG 8 ? ? "O3'" B DG 8 ? ? P B DA 9 ? ? 112.39 119.70 -7.31 1.20 Y 10 1 "C3'" B DA 9 ? ? "O3'" B DA 9 ? ? P B DG 10 ? ? 106.98 119.70 -12.72 1.20 Y 11 1 "C3'" B DG 10 ? ? "O3'" B DG 10 ? ? P B DG 11 ? ? 111.47 119.70 -8.23 1.20 Y 12 1 "C3'" B DT 12 ? ? "O3'" B DT 12 ? ? P B DG 13 ? ? 111.23 119.70 -8.47 1.20 Y 13 1 "O4'" B DT 16 ? ? "C1'" B DT 16 ? ? N1 B DT 16 ? ? 110.20 108.30 1.90 0.30 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DG OP3 O N N 37 DG P P N N 38 DG OP1 O N N 39 DG OP2 O N N 40 DG "O5'" O N N 41 DG "C5'" C N N 42 DG "C4'" C N R 43 DG "O4'" O N N 44 DG "C3'" C N S 45 DG "O3'" O N N 46 DG "C2'" C N N 47 DG "C1'" C N R 48 DG N9 N Y N 49 DG C8 C Y N 50 DG N7 N Y N 51 DG C5 C Y N 52 DG C6 C N N 53 DG O6 O N N 54 DG N1 N N N 55 DG C2 C N N 56 DG N2 N N N 57 DG N3 N N N 58 DG C4 C Y N 59 DG HOP3 H N N 60 DG HOP2 H N N 61 DG "H5'" H N N 62 DG "H5''" H N N 63 DG "H4'" H N N 64 DG "H3'" H N N 65 DG "HO3'" H N N 66 DG "H2'" H N N 67 DG "H2''" H N N 68 DG "H1'" H N N 69 DG H8 H N N 70 DG H1 H N N 71 DG H21 H N N 72 DG H22 H N N 73 DT OP3 O N N 74 DT P P N N 75 DT OP1 O N N 76 DT OP2 O N N 77 DT "O5'" O N N 78 DT "C5'" C N N 79 DT "C4'" C N R 80 DT "O4'" O N N 81 DT "C3'" C N S 82 DT "O3'" O N N 83 DT "C2'" C N N 84 DT "C1'" C N R 85 DT N1 N N N 86 DT C2 C N N 87 DT O2 O N N 88 DT N3 N N N 89 DT C4 C N N 90 DT O4 O N N 91 DT C5 C N N 92 DT C7 C N N 93 DT C6 C N N 94 DT HOP3 H N N 95 DT HOP2 H N N 96 DT "H5'" H N N 97 DT "H5''" H N N 98 DT "H4'" H N N 99 DT "H3'" H N N 100 DT "HO3'" H N N 101 DT "H2'" H N N 102 DT "H2''" H N N 103 DT "H1'" H N N 104 DT H3 H N N 105 DT H71 H N N 106 DT H72 H N N 107 DT H73 H N N 108 DT H6 H N N 109 HOH O O N N 110 HOH H1 H N N 111 HOH H2 H N N 112 K K K N N 113 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DG OP3 P sing N N 39 DG OP3 HOP3 sing N N 40 DG P OP1 doub N N 41 DG P OP2 sing N N 42 DG P "O5'" sing N N 43 DG OP2 HOP2 sing N N 44 DG "O5'" "C5'" sing N N 45 DG "C5'" "C4'" sing N N 46 DG "C5'" "H5'" sing N N 47 DG "C5'" "H5''" sing N N 48 DG "C4'" "O4'" sing N N 49 DG "C4'" "C3'" sing N N 50 DG "C4'" "H4'" sing N N 51 DG "O4'" "C1'" sing N N 52 DG "C3'" "O3'" sing N N 53 DG "C3'" "C2'" sing N N 54 DG "C3'" "H3'" sing N N 55 DG "O3'" "HO3'" sing N N 56 DG "C2'" "C1'" sing N N 57 DG "C2'" "H2'" sing N N 58 DG "C2'" "H2''" sing N N 59 DG "C1'" N9 sing N N 60 DG "C1'" "H1'" sing N N 61 DG N9 C8 sing Y N 62 DG N9 C4 sing Y N 63 DG C8 N7 doub Y N 64 DG C8 H8 sing N N 65 DG N7 C5 sing Y N 66 DG C5 C6 sing N N 67 DG C5 C4 doub Y N 68 DG C6 O6 doub N N 69 DG C6 N1 sing N N 70 DG N1 C2 sing N N 71 DG N1 H1 sing N N 72 DG C2 N2 sing N N 73 DG C2 N3 doub N N 74 DG N2 H21 sing N N 75 DG N2 H22 sing N N 76 DG N3 C4 sing N N 77 DT OP3 P sing N N 78 DT OP3 HOP3 sing N N 79 DT P OP1 doub N N 80 DT P OP2 sing N N 81 DT P "O5'" sing N N 82 DT OP2 HOP2 sing N N 83 DT "O5'" "C5'" sing N N 84 DT "C5'" "C4'" sing N N 85 DT "C5'" "H5'" sing N N 86 DT "C5'" "H5''" sing N N 87 DT "C4'" "O4'" sing N N 88 DT "C4'" "C3'" sing N N 89 DT "C4'" "H4'" sing N N 90 DT "O4'" "C1'" sing N N 91 DT "C3'" "O3'" sing N N 92 DT "C3'" "C2'" sing N N 93 DT "C3'" "H3'" sing N N 94 DT "O3'" "HO3'" sing N N 95 DT "C2'" "C1'" sing N N 96 DT "C2'" "H2'" sing N N 97 DT "C2'" "H2''" sing N N 98 DT "C1'" N1 sing N N 99 DT "C1'" "H1'" sing N N 100 DT N1 C2 sing N N 101 DT N1 C6 sing N N 102 DT C2 O2 doub N N 103 DT C2 N3 sing N N 104 DT N3 C4 sing N N 105 DT N3 H3 sing N N 106 DT C4 O4 doub N N 107 DT C4 C5 sing N N 108 DT C5 C7 sing N N 109 DT C5 C6 doub N N 110 DT C7 H71 sing N N 111 DT C7 H72 sing N N 112 DT C7 H73 sing N N 113 DT C6 H6 sing N N 114 HOH O H1 sing N N 115 HOH O H2 sing N N 116 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 7X7G 'double helix' 7X7G 'quadruple helix' # _ndb_struct_na_base_pair.model_number 1 _ndb_struct_na_base_pair.i_label_asym_id A _ndb_struct_na_base_pair.i_label_comp_id DG _ndb_struct_na_base_pair.i_label_seq_id 2 _ndb_struct_na_base_pair.i_symmetry 1_555 _ndb_struct_na_base_pair.j_label_asym_id A _ndb_struct_na_base_pair.j_label_comp_id DG _ndb_struct_na_base_pair.j_label_seq_id 13 _ndb_struct_na_base_pair.j_symmetry 1_555 _ndb_struct_na_base_pair.shear -1.651 _ndb_struct_na_base_pair.stretch -3.381 _ndb_struct_na_base_pair.stagger 0.217 _ndb_struct_na_base_pair.buckle -3.870 _ndb_struct_na_base_pair.propeller 0.572 _ndb_struct_na_base_pair.opening 89.145 _ndb_struct_na_base_pair.pair_number 1 _ndb_struct_na_base_pair.pair_name A_DG2:DG13_A _ndb_struct_na_base_pair.i_auth_asym_id A _ndb_struct_na_base_pair.i_auth_seq_id 2 _ndb_struct_na_base_pair.i_PDB_ins_code ? _ndb_struct_na_base_pair.j_auth_asym_id A _ndb_struct_na_base_pair.j_auth_seq_id 13 _ndb_struct_na_base_pair.j_PDB_ins_code ? _ndb_struct_na_base_pair.hbond_type_28 6 _ndb_struct_na_base_pair.hbond_type_12 3 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Research Foundation (NRF, Singapore)' Singapore NRF-NRFI2017-09 1 'Ministry of Education (MoE, Singapore)' Singapore MOE2018-T2-2-029 2 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id K _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id K _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1Y8D _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'P 1 21 1' _space_group.name_Hall 'P 2yb' _space_group.IT_number 4 _space_group.crystal_system monoclinic _space_group.id 1 #