HEADER TRANSFERASE 01-APR-22 7XFG TITLE NMR SOLUTION STRUCTURES OF P300 TAZ2 DOMAIN IN COMPLEX WITH BRD4-NUT TITLE 2 F1C DOMAIN BINDING MOTIF #1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE ACETYLTRANSFERASE P300; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: TAZ2 DOMAIN; COMPND 5 SYNONYM: P300 HAT,E1A-ASSOCIATED PROTEIN P300,HISTONE COMPND 6 BUTYRYLTRANSFERASE P300,HISTONE CROTONYLTRANSFERASE P300,PROTEIN 2- COMPND 7 HYDROXYISOBUTYRYLTRANSFERASE P300,PROTEIN LACTYLTRANSFERAS P300, COMPND 8 PROTEIN PROPIONYLTRANSFERASE P300; COMPND 9 EC: 2.3.1.48,2.3.1.-; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES; COMPND 12 MOL_ID: 2; COMPND 13 MOLECULE: NUT FAMILY MEMBER 1; COMPND 14 CHAIN: B; COMPND 15 SYNONYM: NUCLEAR PROTEIN IN TESTIS; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EP300, P300; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS BRD4-NUT FUSION PROTEIN, CBP/P300, TAZ2 DOMAIN, F1C DOMAIN, NUT KEYWDS 2 CARCINOMA, PEPTIDE BINDING PROTEIN, TRANSFERASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR D.YU,L.ZENG,M.-M.ZHOU REVDAT 3 30-OCT-24 7XFG 1 JRNL REVDAT 2 15-MAY-24 7XFG 1 REMARK REVDAT 1 12-APR-23 7XFG 0 JRNL AUTH D.YU,Y.LIANG,C.KIM,A.JAGANATHAN,D.JI,X.HAN,X.YANG,Y.JIA, JRNL AUTH 2 R.GU,C.WANG,Q.ZHANG,K.L.CHEUNG,M.M.ZHOU,L.ZENG JRNL TITL STRUCTURAL MECHANISM OF BRD4-NUT AND P300 BIPARTITE JRNL TITL 2 INTERACTION IN PROPAGATING ABERRANT GENE TRANSCRIPTION IN JRNL TITL 3 CHROMATIN IN NUT CARCINOMA. JRNL REF NAT COMMUN V. 14 378 2023 JRNL REFN ESSN 2041-1723 JRNL PMID 36690674 JRNL DOI 10.1038/S41467-023-36063-5 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA, CNS REMARK 3 AUTHORS : LINGE, O'DONOGHUE AND NILGES (ARIA), BRUNGER, REMARK 3 ADAMS, CLORE, GROS, NILGES AND READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7XFG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-APR-22. REMARK 100 THE DEPOSITION ID IS D_1300028721. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.3 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-100% 13C; U-100% 15N] REMARK 210 P300 TAZ2 DOMAIN, 1.5 MM BRD4- REMARK 210 NUT FUSION PROTEIN F1C DOMAIN REMARK 210 BINDING MOTIF #1, 200 MM SODIUM REMARK 210 PHOSPHATE, 3.0 MM [U-100% 2H] REMARK 210 DTT, 90% H2O/10% D2O; 0.5 MM [U- REMARK 210 100% 13C; U-100% 15N] P300 TAZ2 REMARK 210 DOMAIN, 1.5 MM BRD4-NUT FUSION REMARK 210 PROTEIN F1C DOMAIN BINDING MOTIF REMARK 210 #1, 200 MM SODIUM PHOSPHATE, 3.0 REMARK 210 MM [U-100% 2H] DTT, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCACB; 3D HN(COCA)CB; 3D 1H REMARK 210 -15N NOESY; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D 1H-13C NOESY REMARK 210 AROMATIC; 3D 13C-EDITED 13C/15N REMARK 210 FILTERED NOESY ALIPHATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE NEO REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRVIEW, TOPSPIN, NMRPIPE REMARK 210 METHOD USED : DISTANCE GEOMETRY REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG21 VAL A 46 HD11 LEU B 208 1.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 56 -70.06 -44.40 REMARK 500 1 ASN A 58 33.28 -82.30 REMARK 500 1 GLU A 97 -92.38 -78.85 REMARK 500 1 PHE A 98 -45.04 145.60 REMARK 500 1 MET B 202 76.48 59.87 REMARK 500 1 TYR B 203 114.98 67.00 REMARK 500 1 ILE B 212 70.82 -118.99 REMARK 500 2 ASN A 58 32.52 -81.85 REMARK 500 2 HIS A 77 37.42 -98.59 REMARK 500 2 GLU A 97 -70.01 -59.11 REMARK 500 2 ASP B 205 87.45 55.69 REMARK 500 3 LYS A 56 -70.59 -41.90 REMARK 500 3 ASN A 58 22.14 -75.52 REMARK 500 4 ALA A 5 -161.31 62.78 REMARK 500 4 LYS A 54 -34.94 -131.49 REMARK 500 4 ASN A 58 36.55 -83.53 REMARK 500 4 HIS A 77 37.63 -97.46 REMARK 500 4 GLU A 97 -80.60 -65.38 REMARK 500 4 ALA A 100 55.07 -145.79 REMARK 500 4 TYR B 203 114.67 68.28 REMARK 500 4 PRO B 206 74.96 -64.81 REMARK 500 4 ILE B 212 60.66 -114.49 REMARK 500 4 GLU B 214 106.38 -52.43 REMARK 500 5 CYS A 35 102.12 -59.07 REMARK 500 5 LYS A 56 -70.46 -39.50 REMARK 500 5 ASN A 58 33.30 -83.67 REMARK 500 5 HIS A 77 37.39 -95.34 REMARK 500 6 ALA A 5 75.12 54.23 REMARK 500 6 ASN A 58 31.53 -81.41 REMARK 500 6 LYS A 82 43.83 -109.48 REMARK 500 6 GLU A 97 -74.92 -66.25 REMARK 500 6 TYR B 203 86.61 65.42 REMARK 500 6 ASP B 205 72.98 66.23 REMARK 500 6 PRO B 206 65.85 -100.49 REMARK 500 6 LEU B 215 -171.10 49.54 REMARK 500 7 CYS A 35 99.36 -56.05 REMARK 500 7 ASN A 58 34.33 -81.03 REMARK 500 7 HIS A 77 37.13 -95.91 REMARK 500 7 LYS A 82 42.27 -108.75 REMARK 500 7 PRO A 86 -70.74 -50.18 REMARK 500 7 ALA A 100 54.49 -151.72 REMARK 500 7 MET B 202 -167.84 63.59 REMARK 500 8 ARG A 4 51.40 -96.23 REMARK 500 8 CYS A 35 101.91 -58.07 REMARK 500 8 LYS A 82 61.39 -110.44 REMARK 500 8 MET B 202 -164.63 65.49 REMARK 500 8 TYR B 203 131.08 74.32 REMARK 500 8 ASP B 205 88.07 58.18 REMARK 500 8 ILE B 212 78.72 -119.58 REMARK 500 9 CYS A 35 102.33 -54.53 REMARK 500 REMARK 500 THIS ENTRY HAS 127 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 26 NE2 REMARK 620 2 CYS A 30 SG 107.7 REMARK 620 3 CYS A 35 SG 107.1 114.7 REMARK 620 4 CYS A 40 SG 102.4 112.4 111.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 49 NE2 REMARK 620 2 CYS A 53 SG 108.2 REMARK 620 3 CYS A 61 SG 107.5 116.7 REMARK 620 4 CYS A 64 SG 104.4 108.2 111.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 503 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 74 NE2 REMARK 620 2 CYS A 78 SG 108.3 REMARK 620 3 CYS A 83 SG 106.9 113.9 REMARK 620 4 CYS A 88 SG 104.7 111.5 111.1 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7XEZ RELATED DB: PDB REMARK 900 7XEZ CONTAINS THE SAME PROTEIN DOMAIN REMARK 900 RELATED ID: 36481 RELATED DB: BMRB REMARK 900 NMR SOLUTION STRUCTURES OF P300 TAZ2 DOMAIN IN COMPLEX WITH BRD4- REMARK 900 NUT F1C DOMAIN BINDING MOTIF #1 DBREF 7XFG A 5 94 UNP Q09472 EP300_HUMAN 1723 1812 DBREF 7XFG B 201 216 UNP Q86Y26 NUTM1_HUMAN 403 418 SEQADV 7XFG SER A 1 UNP Q09472 EXPRESSION TAG SEQADV 7XFG GLY A 2 UNP Q09472 EXPRESSION TAG SEQADV 7XFG GLY A 3 UNP Q09472 EXPRESSION TAG SEQADV 7XFG ARG A 4 UNP Q09472 EXPRESSION TAG SEQADV 7XFG ALA A 20 UNP Q09472 CYS 1738 ENGINEERED MUTATION SEQADV 7XFG ALA A 28 UNP Q09472 CYS 1746 ENGINEERED MUTATION SEQADV 7XFG ALA A 71 UNP Q09472 CYS 1789 ENGINEERED MUTATION SEQADV 7XFG ALA A 72 UNP Q09472 CYS 1790 ENGINEERED MUTATION SEQADV 7XFG GLY A 95 UNP Q09472 EXPRESSION TAG SEQADV 7XFG SER A 96 UNP Q09472 EXPRESSION TAG SEQADV 7XFG GLU A 97 UNP Q09472 EXPRESSION TAG SEQADV 7XFG PHE A 98 UNP Q09472 EXPRESSION TAG SEQADV 7XFG PRO A 99 UNP Q09472 EXPRESSION TAG SEQADV 7XFG ALA A 100 UNP Q09472 EXPRESSION TAG SEQADV 7XFG GLY A 101 UNP Q09472 EXPRESSION TAG SEQADV 7XFG ASN A 102 UNP Q09472 EXPRESSION TAG SEQRES 1 A 102 SER GLY GLY ARG ALA THR GLN SER PRO GLY ASP SER ARG SEQRES 2 A 102 ARG LEU SER ILE GLN ARG ALA ILE GLN SER LEU VAL HIS SEQRES 3 A 102 ALA ALA GLN CYS ARG ASN ALA ASN CYS SER LEU PRO SER SEQRES 4 A 102 CYS GLN LYS MET LYS ARG VAL VAL GLN HIS THR LYS GLY SEQRES 5 A 102 CYS LYS ARG LYS THR ASN GLY GLY CYS PRO ILE CYS LYS SEQRES 6 A 102 GLN LEU ILE ALA LEU ALA ALA TYR HIS ALA LYS HIS CYS SEQRES 7 A 102 GLN GLU ASN LYS CYS PRO VAL PRO PHE CYS LEU ASN ILE SEQRES 8 A 102 LYS GLN LYS GLY SER GLU PHE PRO ALA GLY ASN SEQRES 1 B 16 GLY MET TYR PRO ASP PRO GLY LEU LEU SER TYR ILE ASN SEQRES 2 B 16 GLU LEU CYS HET ZN A 501 1 HET ZN A 502 1 HET ZN A 503 1 HETNAM ZN ZINC ION FORMUL 3 ZN 3(ZN 2+) HELIX 1 AA1 SER A 8 CYS A 30 1 23 HELIX 2 AA2 LEU A 37 GLY A 52 1 16 HELIX 3 AA3 PRO A 62 HIS A 77 1 16 HELIX 4 AA4 VAL A 85 GLY A 95 1 11 HELIX 5 AA5 GLY B 207 ILE B 212 1 6 LINK NE2 HIS A 26 ZN ZN A 502 1555 1555 2.14 LINK SG CYS A 30 ZN ZN A 502 1555 1555 2.37 LINK SG CYS A 35 ZN ZN A 502 1555 1555 2.37 LINK SG CYS A 40 ZN ZN A 502 1555 1555 2.35 LINK NE2 HIS A 49 ZN ZN A 501 1555 1555 2.14 LINK SG CYS A 53 ZN ZN A 501 1555 1555 2.35 LINK SG CYS A 61 ZN ZN A 501 1555 1555 2.36 LINK SG CYS A 64 ZN ZN A 501 1555 1555 2.36 LINK NE2 HIS A 74 ZN ZN A 503 1555 1555 2.12 LINK SG CYS A 78 ZN ZN A 503 1555 1555 2.36 LINK SG CYS A 83 ZN ZN A 503 1555 1555 2.35 LINK SG CYS A 88 ZN ZN A 503 1555 1555 2.35 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1