data_7XJD # _entry.id 7XJD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7XJD pdb_00007xjd 10.2210/pdb7xjd/pdb WWPDB D_1300028945 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 7XJC unspecified PDB . 7XJE unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7XJD _pdbx_database_status.recvd_initial_deposition_date 2022-04-16 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Taguchi, S.' 1 ? 'Niwa, S.' 2 0000-0002-2648-8257 'Takeda, K.' 3 0000-0002-4094-6816 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Commun Biol' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2399-3642 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 6 _citation.language ? _citation.page_first 190 _citation.page_last 190 _citation.title 'Detailed analysis of distorted retinal and its interaction with surrounding residues in the K intermediate of bacteriorhodopsin.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s42003-023-04554-2 _citation.pdbx_database_id_PubMed 36808185 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Taguchi, S.' 1 ? primary 'Niwa, S.' 2 0000-0002-2648-8257 primary 'Dao, H.A.' 3 ? primary 'Tanaka, Y.' 4 ? primary 'Takeda, R.' 5 0000-0002-1638-4534 primary 'Fukai, S.' 6 0000-0002-1241-1443 primary 'Hasegawa, K.' 7 0000-0003-0331-1624 primary 'Takeda, K.' 8 0000-0002-4094-6816 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 7XJD _cell.details ? _cell.formula_units_Z ? _cell.length_a 60.570 _cell.length_a_esd ? _cell.length_b 60.570 _cell.length_b_esd ? _cell.length_c 110.890 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 7XJD _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat Bacteriorhodopsin 25190.729 1 ? ? ? ? 2 non-polymer syn RETINAL 284.436 1 ? ? ? ? 3 non-polymer syn 2,3-DI-PHYTANYL-GLYCEROL 653.157 14 ? ? ? ? 4 non-polymer syn 2,10,23-TRIMETHYL-TETRACOSANE 380.734 4 ? ? ? ? 5 water nat water 18.015 58 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name BR,Bacterioopsin,BO # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;TGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWARYA DWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKAESMR PEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLRSRAIFGEAE ; _entity_poly.pdbx_seq_one_letter_code_can ;TGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWARYA DWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKAESMR PEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLRSRAIFGEAE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 GLY n 1 3 ARG n 1 4 PRO n 1 5 GLU n 1 6 TRP n 1 7 ILE n 1 8 TRP n 1 9 LEU n 1 10 ALA n 1 11 LEU n 1 12 GLY n 1 13 THR n 1 14 ALA n 1 15 LEU n 1 16 MET n 1 17 GLY n 1 18 LEU n 1 19 GLY n 1 20 THR n 1 21 LEU n 1 22 TYR n 1 23 PHE n 1 24 LEU n 1 25 VAL n 1 26 LYS n 1 27 GLY n 1 28 MET n 1 29 GLY n 1 30 VAL n 1 31 SER n 1 32 ASP n 1 33 PRO n 1 34 ASP n 1 35 ALA n 1 36 LYS n 1 37 LYS n 1 38 PHE n 1 39 TYR n 1 40 ALA n 1 41 ILE n 1 42 THR n 1 43 THR n 1 44 LEU n 1 45 VAL n 1 46 PRO n 1 47 ALA n 1 48 ILE n 1 49 ALA n 1 50 PHE n 1 51 THR n 1 52 MET n 1 53 TYR n 1 54 LEU n 1 55 SER n 1 56 MET n 1 57 LEU n 1 58 LEU n 1 59 GLY n 1 60 TYR n 1 61 GLY n 1 62 LEU n 1 63 THR n 1 64 MET n 1 65 VAL n 1 66 PRO n 1 67 PHE n 1 68 GLY n 1 69 GLY n 1 70 GLU n 1 71 GLN n 1 72 ASN n 1 73 PRO n 1 74 ILE n 1 75 TYR n 1 76 TRP n 1 77 ALA n 1 78 ARG n 1 79 TYR n 1 80 ALA n 1 81 ASP n 1 82 TRP n 1 83 LEU n 1 84 PHE n 1 85 THR n 1 86 THR n 1 87 PRO n 1 88 LEU n 1 89 LEU n 1 90 LEU n 1 91 LEU n 1 92 ASP n 1 93 LEU n 1 94 ALA n 1 95 LEU n 1 96 LEU n 1 97 VAL n 1 98 ASP n 1 99 ALA n 1 100 ASP n 1 101 GLN n 1 102 GLY n 1 103 THR n 1 104 ILE n 1 105 LEU n 1 106 ALA n 1 107 LEU n 1 108 VAL n 1 109 GLY n 1 110 ALA n 1 111 ASP n 1 112 GLY n 1 113 ILE n 1 114 MET n 1 115 ILE n 1 116 GLY n 1 117 THR n 1 118 GLY n 1 119 LEU n 1 120 VAL n 1 121 GLY n 1 122 ALA n 1 123 LEU n 1 124 THR n 1 125 LYS n 1 126 VAL n 1 127 TYR n 1 128 SER n 1 129 TYR n 1 130 ARG n 1 131 PHE n 1 132 VAL n 1 133 TRP n 1 134 TRP n 1 135 ALA n 1 136 ILE n 1 137 SER n 1 138 THR n 1 139 ALA n 1 140 ALA n 1 141 MET n 1 142 LEU n 1 143 TYR n 1 144 ILE n 1 145 LEU n 1 146 TYR n 1 147 VAL n 1 148 LEU n 1 149 PHE n 1 150 PHE n 1 151 GLY n 1 152 PHE n 1 153 THR n 1 154 SER n 1 155 LYS n 1 156 ALA n 1 157 GLU n 1 158 SER n 1 159 MET n 1 160 ARG n 1 161 PRO n 1 162 GLU n 1 163 VAL n 1 164 ALA n 1 165 SER n 1 166 THR n 1 167 PHE n 1 168 LYS n 1 169 VAL n 1 170 LEU n 1 171 ARG n 1 172 ASN n 1 173 VAL n 1 174 THR n 1 175 VAL n 1 176 VAL n 1 177 LEU n 1 178 TRP n 1 179 SER n 1 180 ALA n 1 181 TYR n 1 182 PRO n 1 183 VAL n 1 184 VAL n 1 185 TRP n 1 186 LEU n 1 187 ILE n 1 188 GLY n 1 189 SER n 1 190 GLU n 1 191 GLY n 1 192 ALA n 1 193 GLY n 1 194 ILE n 1 195 VAL n 1 196 PRO n 1 197 LEU n 1 198 ASN n 1 199 ILE n 1 200 GLU n 1 201 THR n 1 202 LEU n 1 203 LEU n 1 204 PHE n 1 205 MET n 1 206 VAL n 1 207 LEU n 1 208 ASP n 1 209 VAL n 1 210 SER n 1 211 ALA n 1 212 LYS n 1 213 VAL n 1 214 GLY n 1 215 PHE n 1 216 GLY n 1 217 LEU n 1 218 ILE n 1 219 LEU n 1 220 LEU n 1 221 ARG n 1 222 SER n 1 223 ARG n 1 224 ALA n 1 225 ILE n 1 226 PHE n 1 227 GLY n 1 228 GLU n 1 229 ALA n 1 230 GLU n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 230 _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Halobacterium salinarum NRC-1' _entity_src_nat.pdbx_ncbi_taxonomy_id 64091 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain 'ATCC 700922 / JCM 11081 / NRC-1' _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BACR_HALSA _struct_ref.pdbx_db_accession P02945 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWARYA DWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKAESMR PEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLRSRAIFGEAE ; _struct_ref.pdbx_align_begin 18 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7XJD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 230 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P02945 _struct_ref_seq.db_align_beg 18 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 247 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 5 _struct_ref_seq.pdbx_auth_seq_align_end 234 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 L2P non-polymer . 2,3-DI-PHYTANYL-GLYCEROL '1,2-DI-1-(3,7,11,15-TETRAMETHYL-HEXADECANE)-SN-GLYCEROL' 'C43 H88 O3' 653.157 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 RET non-polymer . RETINAL ? 'C20 H28 O' 284.436 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SQU non-polymer . 2,10,23-TRIMETHYL-TETRACOSANE 'LIPID FRAGMENT' 'C27 H56' 380.734 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7XJD _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.33 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 47.23 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'LIPIDIC CUBIC PHASE' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'MO, 2.0-2.5 M PHOSPHATE' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 15 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-10-06 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL41XU' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.8 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL41XU _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate 23.988 _reflns.entry_id 7XJD _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.330 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 52290 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.900 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.807 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.040 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.823 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.082 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.074 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 1.330 1.420 ? 1.330 ? ? ? ? 8413 ? ? ? ? ? ? ? ? ? ? ? 5.496 ? ? ? 1.286 ? ? 1 1 0.456 ? ? 99.700 ? 1.162 ? ? ? ? ? ? ? ? ? 1.420 1.510 ? 2.380 ? ? ? ? 7923 ? ? ? ? ? ? ? ? ? ? ? 5.838 ? ? ? 0.772 ? ? 2 1 0.736 ? ? 100.000 ? 0.702 ? ? ? ? ? ? ? ? ? 1.510 1.630 ? 4.020 ? ? ? ? 7369 ? ? ? ? ? ? ? ? ? ? ? 5.700 ? ? ? 0.455 ? ? 3 1 0.862 ? ? 100.000 ? 0.412 ? ? ? ? ? ? ? ? ? 1.630 1.790 ? 6.840 ? ? ? ? 6777 ? ? ? ? ? ? ? ? ? ? ? 6.115 ? ? ? 0.276 ? ? 4 1 0.953 ? ? 100.000 ? 0.252 ? ? ? ? ? ? ? ? ? 1.790 2.000 ? 11.460 ? ? ? ? 6139 ? ? ? ? ? ? ? ? ? ? ? 6.044 ? ? ? 0.159 ? ? 5 1 0.984 ? ? 100.000 ? 0.145 ? ? ? ? ? ? ? ? ? 2.000 2.310 ? 18.730 ? ? ? ? 5428 ? ? ? ? ? ? ? ? ? ? ? 5.720 ? ? ? 0.093 ? ? 6 1 0.993 ? ? 100.000 ? 0.084 ? ? ? ? ? ? ? ? ? 2.310 2.830 ? 25.260 ? ? ? ? 4587 ? ? ? ? ? ? ? ? ? ? ? 5.806 ? ? ? 0.070 ? ? 7 1 0.995 ? ? 99.900 ? 0.063 ? ? ? ? ? ? ? ? ? 2.830 3.990 ? 31.620 ? ? ? ? 3561 ? ? ? ? ? ? ? ? ? ? ? 5.794 ? ? ? 0.055 ? ? 8 1 0.997 ? ? 100.000 ? 0.050 ? ? ? ? ? ? ? ? ? 3.990 50 ? 35.070 ? ? ? ? 1994 ? ? ? ? ? ? ? ? ? ? ? 5.875 ? ? ? 0.051 ? ? 9 1 0.997 ? ? 99.800 ? 0.046 ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 167.910 _refine.B_iso_mean 32.9284 _refine.B_iso_min 13.960 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7XJD _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.33 _refine.ls_d_res_low 50 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 52290 _refine.ls_number_reflns_R_free 2436 _refine.ls_number_reflns_R_work 29754 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 100 _refine.ls_percent_reflns_R_free 5 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.176 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.136 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5ZIL _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.33 _refine_hist.d_res_low 50 _refine_hist.number_atoms_solvent 58 _refine_hist.number_atoms_total 2240 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1788 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 394 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # _struct.entry_id 7XJD _struct.title 'Crystal structure of bacteriorhodopsin in the ground state by red laser irradiation' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7XJD _struct_keywords.text 'proton pump, membrane protein, PROTON TRANSPORT' _struct_keywords.pdbx_keywords 'PROTON TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 4 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? O N N 3 ? P N N 3 ? Q N N 3 ? R N N 4 ? S N N 4 ? T N N 4 ? U N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLU A 5 ? GLY A 27 ? GLU A 9 GLY A 31 1 ? 23 HELX_P HELX_P2 AA2 ASP A 32 ? LEU A 58 ? ASP A 36 LEU A 62 1 ? 27 HELX_P HELX_P3 AA3 TRP A 76 ? VAL A 97 ? TRP A 80 VAL A 101 1 ? 22 HELX_P HELX_P4 AA4 ASP A 100 ? THR A 124 ? ASP A 104 THR A 128 1 ? 25 HELX_P HELX_P5 AA5 VAL A 126 ? GLY A 151 ? VAL A 130 GLY A 155 1 ? 26 HELX_P HELX_P6 AA6 ARG A 160 ? GLY A 188 ? ARG A 164 GLY A 192 1 ? 29 HELX_P HELX_P7 AA7 PRO A 196 ? ARG A 221 ? PRO A 200 ARG A 225 1 ? 26 HELX_P HELX_P8 AA8 SER A 222 ? PHE A 226 ? SER A 226 PHE A 230 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag one _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 212 _struct_conn.ptnr1_label_atom_id NZ _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id RET _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id C15 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 216 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id RET _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.351 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 62 ? PHE A 67 ? LEU A 66 PHE A 71 AA1 2 GLU A 70 ? TYR A 75 ? GLU A 74 TYR A 79 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id THR _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 63 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id THR _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 67 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ILE _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 74 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 78 # _atom_sites.entry_id 7XJD _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.016510 _atom_sites.fract_transf_matrix[1][2] 0.009532 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019064 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009018 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'L2P A 302 HAS WRONG CHIRALITY AT ATOM C2' 2 'L2P A 302 HAS WRONG CHIRALITY AT ATOM C18' 3 'L2P A 302 HAS WRONG CHIRALITY AT ATOM C23' 4 'L2P A 302 HAS WRONG CHIRALITY AT ATOM C43' 5 'L2P A 302 HAS WRONG CHIRALITY AT ATOM C48' 6 'L2P A 303 HAS WRONG CHIRALITY AT ATOM C2' 7 'L2P A 304 HAS WRONG CHIRALITY AT ATOM C18' 8 'L2P A 304 HAS WRONG CHIRALITY AT ATOM C43' 9 'L2P A 305 HAS WRONG CHIRALITY AT ATOM C2' 10 'L2P A 305 HAS WRONG CHIRALITY AT ATOM C13' 11 'L2P A 305 HAS WRONG CHIRALITY AT ATOM C23' 12 'L2P A 305 HAS WRONG CHIRALITY AT ATOM C43' 13 'L2P A 306 HAS WRONG CHIRALITY AT ATOM C23' 14 'L2P A 306 HAS WRONG CHIRALITY AT ATOM C43' 15 'L2P A 306 HAS WRONG CHIRALITY AT ATOM C53' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 5 5 THR THR A . n A 1 2 GLY 2 6 6 GLY GLY A . n A 1 3 ARG 3 7 7 ARG ARG A . n A 1 4 PRO 4 8 8 PRO PRO A . n A 1 5 GLU 5 9 9 GLU GLU A . n A 1 6 TRP 6 10 10 TRP TRP A . n A 1 7 ILE 7 11 11 ILE ILE A . n A 1 8 TRP 8 12 12 TRP TRP A . n A 1 9 LEU 9 13 13 LEU LEU A . n A 1 10 ALA 10 14 14 ALA ALA A . n A 1 11 LEU 11 15 15 LEU LEU A . n A 1 12 GLY 12 16 16 GLY GLY A . n A 1 13 THR 13 17 17 THR THR A . n A 1 14 ALA 14 18 18 ALA ALA A . n A 1 15 LEU 15 19 19 LEU LEU A . n A 1 16 MET 16 20 20 MET MET A . n A 1 17 GLY 17 21 21 GLY GLY A . n A 1 18 LEU 18 22 22 LEU LEU A . n A 1 19 GLY 19 23 23 GLY GLY A . n A 1 20 THR 20 24 24 THR THR A . n A 1 21 LEU 21 25 25 LEU LEU A . n A 1 22 TYR 22 26 26 TYR TYR A . n A 1 23 PHE 23 27 27 PHE PHE A . n A 1 24 LEU 24 28 28 LEU LEU A . n A 1 25 VAL 25 29 29 VAL VAL A . n A 1 26 LYS 26 30 30 LYS LYS A . n A 1 27 GLY 27 31 31 GLY GLY A . n A 1 28 MET 28 32 32 MET MET A . n A 1 29 GLY 29 33 33 GLY GLY A . n A 1 30 VAL 30 34 34 VAL VAL A . n A 1 31 SER 31 35 35 SER SER A . n A 1 32 ASP 32 36 36 ASP ASP A . n A 1 33 PRO 33 37 37 PRO PRO A . n A 1 34 ASP 34 38 38 ASP ASP A . n A 1 35 ALA 35 39 39 ALA ALA A . n A 1 36 LYS 36 40 40 LYS LYS A . n A 1 37 LYS 37 41 41 LYS LYS A . n A 1 38 PHE 38 42 42 PHE PHE A . n A 1 39 TYR 39 43 43 TYR TYR A . n A 1 40 ALA 40 44 44 ALA ALA A . n A 1 41 ILE 41 45 45 ILE ILE A . n A 1 42 THR 42 46 46 THR THR A . n A 1 43 THR 43 47 47 THR THR A . n A 1 44 LEU 44 48 48 LEU LEU A . n A 1 45 VAL 45 49 49 VAL VAL A . n A 1 46 PRO 46 50 50 PRO PRO A . n A 1 47 ALA 47 51 51 ALA ALA A . n A 1 48 ILE 48 52 52 ILE ILE A . n A 1 49 ALA 49 53 53 ALA ALA A . n A 1 50 PHE 50 54 54 PHE PHE A . n A 1 51 THR 51 55 55 THR THR A . n A 1 52 MET 52 56 56 MET MET A . n A 1 53 TYR 53 57 57 TYR TYR A . n A 1 54 LEU 54 58 58 LEU LEU A . n A 1 55 SER 55 59 59 SER SER A . n A 1 56 MET 56 60 60 MET MET A . n A 1 57 LEU 57 61 61 LEU LEU A . n A 1 58 LEU 58 62 62 LEU LEU A . n A 1 59 GLY 59 63 63 GLY GLY A . n A 1 60 TYR 60 64 64 TYR TYR A . n A 1 61 GLY 61 65 65 GLY GLY A . n A 1 62 LEU 62 66 66 LEU LEU A . n A 1 63 THR 63 67 67 THR THR A . n A 1 64 MET 64 68 68 MET MET A . n A 1 65 VAL 65 69 69 VAL VAL A . n A 1 66 PRO 66 70 70 PRO PRO A . n A 1 67 PHE 67 71 71 PHE PHE A . n A 1 68 GLY 68 72 72 GLY GLY A . n A 1 69 GLY 69 73 73 GLY GLY A . n A 1 70 GLU 70 74 74 GLU GLU A . n A 1 71 GLN 71 75 75 GLN GLN A . n A 1 72 ASN 72 76 76 ASN ASN A . n A 1 73 PRO 73 77 77 PRO PRO A . n A 1 74 ILE 74 78 78 ILE ILE A . n A 1 75 TYR 75 79 79 TYR TYR A . n A 1 76 TRP 76 80 80 TRP TRP A . n A 1 77 ALA 77 81 81 ALA ALA A . n A 1 78 ARG 78 82 82 ARG ARG A . n A 1 79 TYR 79 83 83 TYR TYR A . n A 1 80 ALA 80 84 84 ALA ALA A . n A 1 81 ASP 81 85 85 ASP ASP A . n A 1 82 TRP 82 86 86 TRP TRP A . n A 1 83 LEU 83 87 87 LEU LEU A . n A 1 84 PHE 84 88 88 PHE PHE A . n A 1 85 THR 85 89 89 THR THR A . n A 1 86 THR 86 90 90 THR THR A . n A 1 87 PRO 87 91 91 PRO PRO A . n A 1 88 LEU 88 92 92 LEU LEU A . n A 1 89 LEU 89 93 93 LEU LEU A . n A 1 90 LEU 90 94 94 LEU LEU A . n A 1 91 LEU 91 95 95 LEU LEU A . n A 1 92 ASP 92 96 96 ASP ASP A . n A 1 93 LEU 93 97 97 LEU LEU A . n A 1 94 ALA 94 98 98 ALA ALA A . n A 1 95 LEU 95 99 99 LEU LEU A . n A 1 96 LEU 96 100 100 LEU LEU A . n A 1 97 VAL 97 101 101 VAL VAL A . n A 1 98 ASP 98 102 102 ASP ASP A . n A 1 99 ALA 99 103 103 ALA ALA A . n A 1 100 ASP 100 104 104 ASP ASP A . n A 1 101 GLN 101 105 105 GLN GLN A . n A 1 102 GLY 102 106 106 GLY GLY A . n A 1 103 THR 103 107 107 THR THR A . n A 1 104 ILE 104 108 108 ILE ILE A . n A 1 105 LEU 105 109 109 LEU LEU A . n A 1 106 ALA 106 110 110 ALA ALA A . n A 1 107 LEU 107 111 111 LEU LEU A . n A 1 108 VAL 108 112 112 VAL VAL A . n A 1 109 GLY 109 113 113 GLY GLY A . n A 1 110 ALA 110 114 114 ALA ALA A . n A 1 111 ASP 111 115 115 ASP ASP A . n A 1 112 GLY 112 116 116 GLY GLY A . n A 1 113 ILE 113 117 117 ILE ILE A . n A 1 114 MET 114 118 118 MET MET A . n A 1 115 ILE 115 119 119 ILE ILE A . n A 1 116 GLY 116 120 120 GLY GLY A . n A 1 117 THR 117 121 121 THR THR A . n A 1 118 GLY 118 122 122 GLY GLY A . n A 1 119 LEU 119 123 123 LEU LEU A . n A 1 120 VAL 120 124 124 VAL VAL A . n A 1 121 GLY 121 125 125 GLY GLY A . n A 1 122 ALA 122 126 126 ALA ALA A . n A 1 123 LEU 123 127 127 LEU LEU A . n A 1 124 THR 124 128 128 THR THR A . n A 1 125 LYS 125 129 129 LYS LYS A . n A 1 126 VAL 126 130 130 VAL VAL A . n A 1 127 TYR 127 131 131 TYR TYR A . n A 1 128 SER 128 132 132 SER SER A . n A 1 129 TYR 129 133 133 TYR TYR A . n A 1 130 ARG 130 134 134 ARG ARG A . n A 1 131 PHE 131 135 135 PHE PHE A . n A 1 132 VAL 132 136 136 VAL VAL A . n A 1 133 TRP 133 137 137 TRP TRP A . n A 1 134 TRP 134 138 138 TRP TRP A . n A 1 135 ALA 135 139 139 ALA ALA A . n A 1 136 ILE 136 140 140 ILE ILE A . n A 1 137 SER 137 141 141 SER SER A . n A 1 138 THR 138 142 142 THR THR A . n A 1 139 ALA 139 143 143 ALA ALA A . n A 1 140 ALA 140 144 144 ALA ALA A . n A 1 141 MET 141 145 145 MET MET A . n A 1 142 LEU 142 146 146 LEU LEU A . n A 1 143 TYR 143 147 147 TYR TYR A . n A 1 144 ILE 144 148 148 ILE ILE A . n A 1 145 LEU 145 149 149 LEU LEU A . n A 1 146 TYR 146 150 150 TYR TYR A . n A 1 147 VAL 147 151 151 VAL VAL A . n A 1 148 LEU 148 152 152 LEU LEU A . n A 1 149 PHE 149 153 153 PHE PHE A . n A 1 150 PHE 150 154 154 PHE PHE A . n A 1 151 GLY 151 155 155 GLY GLY A . n A 1 152 PHE 152 156 156 PHE PHE A . n A 1 153 THR 153 157 157 THR THR A . n A 1 154 SER 154 158 158 SER SER A . n A 1 155 LYS 155 159 159 LYS LYS A . n A 1 156 ALA 156 160 160 ALA ALA A . n A 1 157 GLU 157 161 161 GLU GLU A . n A 1 158 SER 158 162 162 SER SER A . n A 1 159 MET 159 163 163 MET MET A . n A 1 160 ARG 160 164 164 ARG ARG A . n A 1 161 PRO 161 165 165 PRO PRO A . n A 1 162 GLU 162 166 166 GLU GLU A . n A 1 163 VAL 163 167 167 VAL VAL A . n A 1 164 ALA 164 168 168 ALA ALA A . n A 1 165 SER 165 169 169 SER SER A . n A 1 166 THR 166 170 170 THR THR A . n A 1 167 PHE 167 171 171 PHE PHE A . n A 1 168 LYS 168 172 172 LYS LYS A . n A 1 169 VAL 169 173 173 VAL VAL A . n A 1 170 LEU 170 174 174 LEU LEU A . n A 1 171 ARG 171 175 175 ARG ARG A . n A 1 172 ASN 172 176 176 ASN ASN A . n A 1 173 VAL 173 177 177 VAL VAL A . n A 1 174 THR 174 178 178 THR THR A . n A 1 175 VAL 175 179 179 VAL VAL A . n A 1 176 VAL 176 180 180 VAL VAL A . n A 1 177 LEU 177 181 181 LEU LEU A . n A 1 178 TRP 178 182 182 TRP TRP A . n A 1 179 SER 179 183 183 SER SER A . n A 1 180 ALA 180 184 184 ALA ALA A . n A 1 181 TYR 181 185 185 TYR TYR A . n A 1 182 PRO 182 186 186 PRO PRO A . n A 1 183 VAL 183 187 187 VAL VAL A . n A 1 184 VAL 184 188 188 VAL VAL A . n A 1 185 TRP 185 189 189 TRP TRP A . n A 1 186 LEU 186 190 190 LEU LEU A . n A 1 187 ILE 187 191 191 ILE ILE A . n A 1 188 GLY 188 192 192 GLY GLY A . n A 1 189 SER 189 193 193 SER SER A . n A 1 190 GLU 190 194 194 GLU GLU A . n A 1 191 GLY 191 195 195 GLY GLY A . n A 1 192 ALA 192 196 196 ALA ALA A . n A 1 193 GLY 193 197 197 GLY GLY A . n A 1 194 ILE 194 198 198 ILE ILE A . n A 1 195 VAL 195 199 199 VAL VAL A . n A 1 196 PRO 196 200 200 PRO PRO A . n A 1 197 LEU 197 201 201 LEU LEU A . n A 1 198 ASN 198 202 202 ASN ASN A . n A 1 199 ILE 199 203 203 ILE ILE A . n A 1 200 GLU 200 204 204 GLU GLU A . n A 1 201 THR 201 205 205 THR THR A . n A 1 202 LEU 202 206 206 LEU LEU A . n A 1 203 LEU 203 207 207 LEU LEU A . n A 1 204 PHE 204 208 208 PHE PHE A . n A 1 205 MET 205 209 209 MET MET A . n A 1 206 VAL 206 210 210 VAL VAL A . n A 1 207 LEU 207 211 211 LEU LEU A . n A 1 208 ASP 208 212 212 ASP ASP A . n A 1 209 VAL 209 213 213 VAL VAL A . n A 1 210 SER 210 214 214 SER SER A . n A 1 211 ALA 211 215 215 ALA ALA A . n A 1 212 LYS 212 216 216 LYS LYS A . n A 1 213 VAL 213 217 217 VAL VAL A . n A 1 214 GLY 214 218 218 GLY GLY A . n A 1 215 PHE 215 219 219 PHE PHE A . n A 1 216 GLY 216 220 220 GLY GLY A . n A 1 217 LEU 217 221 221 LEU LEU A . n A 1 218 ILE 218 222 222 ILE ILE A . n A 1 219 LEU 219 223 223 LEU LEU A . n A 1 220 LEU 220 224 224 LEU LEU A . n A 1 221 ARG 221 225 225 ARG ARG A . n A 1 222 SER 222 226 226 SER SER A . n A 1 223 ARG 223 227 227 ARG ARG A . n A 1 224 ALA 224 228 228 ALA ALA A . n A 1 225 ILE 225 229 229 ILE ILE A . n A 1 226 PHE 226 230 230 PHE PHE A . n A 1 227 GLY 227 231 231 GLY GLY A . n A 1 228 GLU 228 232 232 GLU GLU A . n A 1 229 ALA 229 233 233 ALA ALA A . n A 1 230 GLU 230 234 234 GLU GLU A . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email ktakeda@kuchem.kyoto-u.ac.jp _pdbx_contact_author.name_first Kazuki _pdbx_contact_author.name_last Takeda _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-4094-6816 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RET 1 301 301 RET RET A . C 3 L2P 1 302 302 L2P L2P A . D 3 L2P 1 303 303 L2P L2P A . E 3 L2P 1 304 304 L2P L2P A . F 3 L2P 1 305 305 L2P L2P A . G 3 L2P 1 306 306 L2P L2P A . H 4 SQU 1 312 312 SQU SQU A . I 3 L2P 1 313 313 L2P L2P A . J 3 L2P 1 315 315 L2P L2P A . K 3 L2P 1 320 320 L2P L2P A . L 3 L2P 1 322 322 L2P L2P A . M 3 L2P 1 323 323 L2P L2P A . N 3 L2P 1 324 324 L2P L2P A . O 3 L2P 1 327 327 L2P L2P A . P 3 L2P 1 328 328 L2P L2P A . Q 3 L2P 1 333 333 L2P L2P A . R 4 SQU 1 341 341 SQU SQU A . S 4 SQU 1 342 342 SQU SQU A . T 4 SQU 1 343 343 SQU SQU A . U 5 HOH 1 401 401 HOH HOH A . U 5 HOH 2 402 402 HOH HOH A . U 5 HOH 3 403 403 HOH HOH A . U 5 HOH 4 404 404 HOH HOH A . U 5 HOH 5 405 405 HOH HOH A . U 5 HOH 6 406 406 HOH HOH A . U 5 HOH 7 407 407 HOH HOH A . U 5 HOH 8 411 411 HOH HOH A . U 5 HOH 9 412 412 HOH HOH A . U 5 HOH 10 415 415 HOH HOH A . U 5 HOH 11 416 416 HOH HOH A . U 5 HOH 12 419 419 HOH HOH A . U 5 HOH 13 420 420 HOH HOH A . U 5 HOH 14 450 450 HOH HOH A . U 5 HOH 15 451 451 HOH HOH A . U 5 HOH 16 453 453 HOH HOH A . U 5 HOH 17 454 454 HOH HOH A . U 5 HOH 18 455 455 HOH HOH A . U 5 HOH 19 456 456 HOH HOH A . U 5 HOH 20 457 457 HOH HOH A . U 5 HOH 21 458 458 HOH HOH A . U 5 HOH 22 459 459 HOH HOH A . U 5 HOH 23 460 460 HOH HOH A . U 5 HOH 24 501 501 HOH HOH A . U 5 HOH 25 502 502 HOH HOH A . U 5 HOH 26 511 511 HOH HOH A . U 5 HOH 27 512 512 HOH HOH A . U 5 HOH 28 513 513 HOH HOH A . U 5 HOH 29 514 514 HOH HOH A . U 5 HOH 30 530 530 HOH HOH A . U 5 HOH 31 531 531 HOH HOH A . U 5 HOH 32 532 532 HOH HOH A . U 5 HOH 33 533 533 HOH HOH A . U 5 HOH 34 534 534 HOH HOH A . U 5 HOH 35 535 535 HOH HOH A . U 5 HOH 36 536 536 HOH HOH A . U 5 HOH 37 537 537 HOH HOH A . U 5 HOH 38 538 538 HOH HOH A . U 5 HOH 39 539 539 HOH HOH A . U 5 HOH 40 540 540 HOH HOH A . U 5 HOH 41 541 541 HOH HOH A . U 5 HOH 42 542 542 HOH HOH A . U 5 HOH 43 543 543 HOH HOH A . U 5 HOH 44 544 544 HOH HOH A . U 5 HOH 45 545 545 HOH HOH A . U 5 HOH 46 546 546 HOH HOH A . U 5 HOH 47 547 547 HOH HOH A . U 5 HOH 48 548 548 HOH HOH A . U 5 HOH 49 549 549 HOH HOH A . U 5 HOH 50 550 550 HOH HOH A . U 5 HOH 51 551 551 HOH HOH A . U 5 HOH 52 552 552 HOH HOH A . U 5 HOH 53 553 553 HOH HOH A . U 5 HOH 54 554 554 HOH HOH A . U 5 HOH 55 555 555 HOH HOH A . U 5 HOH 56 556 556 HOH HOH A . U 5 HOH 57 557 557 HOH HOH A . U 5 HOH 58 558 558 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 31720 ? 1 MORE -255 ? 1 'SSA (A^2)' 29230 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_635 -y+1,x-y-2,z -0.5000000000 -0.8660254038 0.0000000000 121.1400000000 0.8660254038 -0.5000000000 0.0000000000 -104.9103174144 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_865 -x+y+3,-x+1,z -0.5000000000 0.8660254038 0.0000000000 151.4250000000 -0.8660254038 -0.5000000000 0.0000000000 52.4551587072 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2023-03-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? SHELX ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? CNS ? ? ? . 5 # _pdbx_entry_details.entry_id 7XJD _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A TYR 64 ? ? CG A TYR 64 ? ? CD1 A TYR 64 ? ? 116.99 121.00 -4.01 0.60 N 2 1 NE A ARG 82 ? ? CZ A ARG 82 ? ? NH2 A ARG 82 ? ? 115.74 120.30 -4.56 0.50 N 3 1 CB A TYR 131 ? ? CG A TYR 131 ? ? CD2 A TYR 131 ? ? 116.43 121.00 -4.57 0.60 N 4 1 CB A TYR 131 ? ? CG A TYR 131 ? ? CD1 A TYR 131 ? ? 125.64 121.00 4.64 0.60 N 5 1 CB A TYR 133 ? ? CG A TYR 133 ? ? CD2 A TYR 133 ? ? 116.46 121.00 -4.54 0.60 N 6 1 CB A TYR 133 ? ? CG A TYR 133 ? ? CD1 A TYR 133 ? ? 126.08 121.00 5.08 0.60 N 7 1 CD A ARG 225 ? ? NE A ARG 225 ? ? CZ A ARG 225 ? ? 135.49 123.60 11.89 1.40 N 8 1 NE A ARG 225 ? ? CZ A ARG 225 ? ? NH1 A ARG 225 ? ? 128.26 120.30 7.96 0.50 N 9 1 NE A ARG 225 ? ? CZ A ARG 225 ? ? NH2 A ARG 225 ? ? 116.63 120.30 -3.67 0.50 N 10 1 CD A ARG 227 ? ? NE A ARG 227 ? ? CZ A ARG 227 ? ? 135.25 123.60 11.65 1.40 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id SER _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 162 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -107.98 _pdbx_validate_torsion.psi 62.84 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C2 ? A L2P 302 ? PLANAR . 2 1 C18 ? A L2P 302 ? PLANAR . 3 1 C23 ? A L2P 302 ? 'WRONG HAND' . 4 1 C43 ? A L2P 302 ? PLANAR . 5 1 C48 ? A L2P 302 ? 'WRONG HAND' . 6 1 C2 ? A L2P 303 ? 'WRONG HAND' . 7 1 C18 ? A L2P 304 ? 'WRONG HAND' . 8 1 C43 ? A L2P 304 ? 'WRONG HAND' . 9 1 C2 ? A L2P 305 ? PLANAR . 10 1 C13 ? A L2P 305 ? 'WRONG HAND' . 11 1 C23 ? A L2P 305 ? 'WRONG HAND' . 12 1 C43 ? A L2P 305 ? PLANAR . 13 1 C23 ? A L2P 306 ? 'WRONG HAND' . 14 1 C43 ? A L2P 306 ? 'WRONG HAND' . 15 1 C53 ? A L2P 306 ? 'WRONG HAND' . # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 544 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 7.07 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A L2P 303 ? C14 ? D L2P 1 C14 2 1 N 1 A L2P 303 ? C24 ? D L2P 1 C24 3 1 N 1 A L2P 303 ? C44 ? D L2P 1 C44 4 1 N 1 A L2P 303 ? C49 ? D L2P 1 C49 5 1 N 1 A L2P 303 ? C54 ? D L2P 1 C54 6 1 N 1 A L2P 303 ? C60 ? D L2P 1 C60 7 1 N 1 A L2P 306 ? C57 ? G L2P 1 C57 8 1 N 1 A L2P 306 ? C58 ? G L2P 1 C58 9 1 N 1 A L2P 306 ? C59 ? G L2P 1 C59 10 1 N 1 A L2P 306 ? C60 ? G L2P 1 C60 11 1 N 1 A SQU 312 ? C1 ? H SQU 1 C1 12 1 N 1 A SQU 312 ? C2 ? H SQU 1 C2 13 1 N 1 A SQU 312 ? C3 ? H SQU 1 C3 14 1 N 1 A SQU 312 ? C4 ? H SQU 1 C4 15 1 N 1 A SQU 312 ? C12 ? H SQU 1 C12 16 1 N 1 A SQU 312 ? C13 ? H SQU 1 C13 17 1 N 1 A SQU 312 ? C14 ? H SQU 1 C14 18 1 N 1 A SQU 312 ? C15 ? H SQU 1 C15 19 1 N 1 A SQU 312 ? C16 ? H SQU 1 C16 20 1 N 1 A SQU 312 ? C17 ? H SQU 1 C17 21 1 N 1 A SQU 312 ? C18 ? H SQU 1 C18 22 1 N 1 A SQU 312 ? C20 ? H SQU 1 C20 23 1 N 1 A SQU 312 ? C21 ? H SQU 1 C21 24 1 N 1 A SQU 312 ? C22 ? H SQU 1 C22 25 1 N 1 A SQU 312 ? C23 ? H SQU 1 C23 26 1 N 1 A SQU 312 ? C25 ? H SQU 1 C25 27 1 N 1 A SQU 312 ? C26 ? H SQU 1 C26 28 1 N 1 A SQU 312 ? C27 ? H SQU 1 C27 29 1 N 1 A SQU 312 ? C28 ? H SQU 1 C28 30 1 N 1 A SQU 312 ? C29 ? H SQU 1 C29 31 1 N 1 A SQU 312 ? C30 ? H SQU 1 C30 32 1 N 1 A L2P 313 ? C3 ? I L2P 1 C3 33 1 N 1 A L2P 313 ? O3 ? I L2P 1 O3 34 1 N 1 A L2P 313 ? C15 ? I L2P 1 C15 35 1 N 1 A L2P 313 ? C16 ? I L2P 1 C16 36 1 N 1 A L2P 313 ? C17 ? I L2P 1 C17 37 1 N 1 A L2P 313 ? C18 ? I L2P 1 C18 38 1 N 1 A L2P 313 ? C19 ? I L2P 1 C19 39 1 N 1 A L2P 313 ? C20 ? I L2P 1 C20 40 1 N 1 A L2P 313 ? C21 ? I L2P 1 C21 41 1 N 1 A L2P 313 ? C22 ? I L2P 1 C22 42 1 N 1 A L2P 313 ? C23 ? I L2P 1 C23 43 1 N 1 A L2P 313 ? C24 ? I L2P 1 C24 44 1 N 1 A L2P 313 ? C25 ? I L2P 1 C25 45 1 N 1 A L2P 313 ? C26 ? I L2P 1 C26 46 1 N 1 A L2P 313 ? C27 ? I L2P 1 C27 47 1 N 1 A L2P 313 ? C28 ? I L2P 1 C28 48 1 N 1 A L2P 313 ? C29 ? I L2P 1 C29 49 1 N 1 A L2P 313 ? C30 ? I L2P 1 C30 50 1 N 1 A L2P 313 ? C50 ? I L2P 1 C50 51 1 N 1 A L2P 313 ? C51 ? I L2P 1 C51 52 1 N 1 A L2P 313 ? C52 ? I L2P 1 C52 53 1 N 1 A L2P 313 ? C53 ? I L2P 1 C53 54 1 N 1 A L2P 313 ? C54 ? I L2P 1 C54 55 1 N 1 A L2P 313 ? C55 ? I L2P 1 C55 56 1 N 1 A L2P 313 ? C56 ? I L2P 1 C56 57 1 N 1 A L2P 313 ? C57 ? I L2P 1 C57 58 1 N 1 A L2P 313 ? C58 ? I L2P 1 C58 59 1 N 1 A L2P 313 ? C59 ? I L2P 1 C59 60 1 N 1 A L2P 313 ? C60 ? I L2P 1 C60 61 1 N 1 A L2P 315 ? C2 ? J L2P 1 C2 62 1 N 1 A L2P 315 ? O2 ? J L2P 1 O2 63 1 N 1 A L2P 315 ? C3 ? J L2P 1 C3 64 1 N 1 A L2P 315 ? O3 ? J L2P 1 O3 65 1 N 1 A L2P 315 ? C14 ? J L2P 1 C14 66 1 N 1 A L2P 315 ? C19 ? J L2P 1 C19 67 1 N 1 A L2P 315 ? C21 ? J L2P 1 C21 68 1 N 1 A L2P 315 ? C22 ? J L2P 1 C22 69 1 N 1 A L2P 315 ? C23 ? J L2P 1 C23 70 1 N 1 A L2P 315 ? C24 ? J L2P 1 C24 71 1 N 1 A L2P 315 ? C25 ? J L2P 1 C25 72 1 N 1 A L2P 315 ? C26 ? J L2P 1 C26 73 1 N 1 A L2P 315 ? C27 ? J L2P 1 C27 74 1 N 1 A L2P 315 ? C28 ? J L2P 1 C28 75 1 N 1 A L2P 315 ? C29 ? J L2P 1 C29 76 1 N 1 A L2P 315 ? C30 ? J L2P 1 C30 77 1 N 1 A L2P 315 ? C41 ? J L2P 1 C41 78 1 N 1 A L2P 315 ? C42 ? J L2P 1 C42 79 1 N 1 A L2P 315 ? C43 ? J L2P 1 C43 80 1 N 1 A L2P 315 ? C44 ? J L2P 1 C44 81 1 N 1 A L2P 315 ? C45 ? J L2P 1 C45 82 1 N 1 A L2P 315 ? C46 ? J L2P 1 C46 83 1 N 1 A L2P 315 ? C47 ? J L2P 1 C47 84 1 N 1 A L2P 315 ? C48 ? J L2P 1 C48 85 1 N 1 A L2P 315 ? C49 ? J L2P 1 C49 86 1 N 1 A L2P 315 ? C50 ? J L2P 1 C50 87 1 N 1 A L2P 315 ? C51 ? J L2P 1 C51 88 1 N 1 A L2P 315 ? C52 ? J L2P 1 C52 89 1 N 1 A L2P 315 ? C53 ? J L2P 1 C53 90 1 N 1 A L2P 315 ? C54 ? J L2P 1 C54 91 1 N 1 A L2P 315 ? C55 ? J L2P 1 C55 92 1 N 1 A L2P 315 ? C56 ? J L2P 1 C56 93 1 N 1 A L2P 315 ? C57 ? J L2P 1 C57 94 1 N 1 A L2P 315 ? C58 ? J L2P 1 C58 95 1 N 1 A L2P 315 ? C59 ? J L2P 1 C59 96 1 N 1 A L2P 315 ? C60 ? J L2P 1 C60 97 1 N 1 A L2P 320 ? C14 ? K L2P 1 C14 98 1 N 1 A L2P 320 ? C18 ? K L2P 1 C18 99 1 N 1 A L2P 320 ? C19 ? K L2P 1 C19 100 1 N 1 A L2P 320 ? C20 ? K L2P 1 C20 101 1 N 1 A L2P 320 ? C21 ? K L2P 1 C21 102 1 N 1 A L2P 320 ? C22 ? K L2P 1 C22 103 1 N 1 A L2P 320 ? C23 ? K L2P 1 C23 104 1 N 1 A L2P 320 ? C24 ? K L2P 1 C24 105 1 N 1 A L2P 320 ? C25 ? K L2P 1 C25 106 1 N 1 A L2P 320 ? C26 ? K L2P 1 C26 107 1 N 1 A L2P 320 ? C27 ? K L2P 1 C27 108 1 N 1 A L2P 320 ? C28 ? K L2P 1 C28 109 1 N 1 A L2P 320 ? C29 ? K L2P 1 C29 110 1 N 1 A L2P 320 ? C30 ? K L2P 1 C30 111 1 N 1 A L2P 320 ? C44 ? K L2P 1 C44 112 1 N 1 A L2P 320 ? C49 ? K L2P 1 C49 113 1 N 1 A L2P 320 ? C54 ? K L2P 1 C54 114 1 N 1 A L2P 320 ? C58 ? K L2P 1 C58 115 1 N 1 A L2P 320 ? C59 ? K L2P 1 C59 116 1 N 1 A L2P 320 ? C60 ? K L2P 1 C60 117 1 N 1 A L2P 322 ? C1 ? L L2P 1 C1 118 1 N 1 A L2P 322 ? O1 ? L L2P 1 O1 119 1 N 1 A L2P 322 ? C2 ? L L2P 1 C2 120 1 N 1 A L2P 322 ? O2 ? L L2P 1 O2 121 1 N 1 A L2P 322 ? C3 ? L L2P 1 C3 122 1 N 1 A L2P 322 ? O3 ? L L2P 1 O3 123 1 N 1 A L2P 322 ? C14 ? L L2P 1 C14 124 1 N 1 A L2P 322 ? C22 ? L L2P 1 C22 125 1 N 1 A L2P 322 ? C23 ? L L2P 1 C23 126 1 N 1 A L2P 322 ? C24 ? L L2P 1 C24 127 1 N 1 A L2P 322 ? C25 ? L L2P 1 C25 128 1 N 1 A L2P 322 ? C26 ? L L2P 1 C26 129 1 N 1 A L2P 322 ? C27 ? L L2P 1 C27 130 1 N 1 A L2P 322 ? C28 ? L L2P 1 C28 131 1 N 1 A L2P 322 ? C29 ? L L2P 1 C29 132 1 N 1 A L2P 322 ? C30 ? L L2P 1 C30 133 1 N 1 A L2P 322 ? C41 ? L L2P 1 C41 134 1 N 1 A L2P 322 ? C42 ? L L2P 1 C42 135 1 N 1 A L2P 322 ? C43 ? L L2P 1 C43 136 1 N 1 A L2P 322 ? C44 ? L L2P 1 C44 137 1 N 1 A L2P 322 ? C45 ? L L2P 1 C45 138 1 N 1 A L2P 322 ? C46 ? L L2P 1 C46 139 1 N 1 A L2P 322 ? C47 ? L L2P 1 C47 140 1 N 1 A L2P 322 ? C48 ? L L2P 1 C48 141 1 N 1 A L2P 322 ? C49 ? L L2P 1 C49 142 1 N 1 A L2P 322 ? C50 ? L L2P 1 C50 143 1 N 1 A L2P 322 ? C51 ? L L2P 1 C51 144 1 N 1 A L2P 322 ? C52 ? L L2P 1 C52 145 1 N 1 A L2P 322 ? C53 ? L L2P 1 C53 146 1 N 1 A L2P 322 ? C54 ? L L2P 1 C54 147 1 N 1 A L2P 322 ? C55 ? L L2P 1 C55 148 1 N 1 A L2P 322 ? C56 ? L L2P 1 C56 149 1 N 1 A L2P 322 ? C57 ? L L2P 1 C57 150 1 N 1 A L2P 322 ? C58 ? L L2P 1 C58 151 1 N 1 A L2P 322 ? C59 ? L L2P 1 C59 152 1 N 1 A L2P 322 ? C60 ? L L2P 1 C60 153 1 N 1 A L2P 323 ? C14 ? M L2P 1 C14 154 1 N 1 A L2P 323 ? C16 ? M L2P 1 C16 155 1 N 1 A L2P 323 ? C17 ? M L2P 1 C17 156 1 N 1 A L2P 323 ? C18 ? M L2P 1 C18 157 1 N 1 A L2P 323 ? C19 ? M L2P 1 C19 158 1 N 1 A L2P 323 ? C20 ? M L2P 1 C20 159 1 N 1 A L2P 323 ? C21 ? M L2P 1 C21 160 1 N 1 A L2P 323 ? C22 ? M L2P 1 C22 161 1 N 1 A L2P 323 ? C23 ? M L2P 1 C23 162 1 N 1 A L2P 323 ? C24 ? M L2P 1 C24 163 1 N 1 A L2P 323 ? C25 ? M L2P 1 C25 164 1 N 1 A L2P 323 ? C26 ? M L2P 1 C26 165 1 N 1 A L2P 323 ? C27 ? M L2P 1 C27 166 1 N 1 A L2P 323 ? C28 ? M L2P 1 C28 167 1 N 1 A L2P 323 ? C29 ? M L2P 1 C29 168 1 N 1 A L2P 323 ? C30 ? M L2P 1 C30 169 1 N 1 A L2P 323 ? C41 ? M L2P 1 C41 170 1 N 1 A L2P 323 ? C42 ? M L2P 1 C42 171 1 N 1 A L2P 323 ? C43 ? M L2P 1 C43 172 1 N 1 A L2P 323 ? C44 ? M L2P 1 C44 173 1 N 1 A L2P 323 ? C45 ? M L2P 1 C45 174 1 N 1 A L2P 323 ? C46 ? M L2P 1 C46 175 1 N 1 A L2P 323 ? C47 ? M L2P 1 C47 176 1 N 1 A L2P 323 ? C48 ? M L2P 1 C48 177 1 N 1 A L2P 323 ? C49 ? M L2P 1 C49 178 1 N 1 A L2P 323 ? C50 ? M L2P 1 C50 179 1 N 1 A L2P 323 ? C51 ? M L2P 1 C51 180 1 N 1 A L2P 323 ? C52 ? M L2P 1 C52 181 1 N 1 A L2P 323 ? C53 ? M L2P 1 C53 182 1 N 1 A L2P 323 ? C54 ? M L2P 1 C54 183 1 N 1 A L2P 323 ? C55 ? M L2P 1 C55 184 1 N 1 A L2P 323 ? C56 ? M L2P 1 C56 185 1 N 1 A L2P 323 ? C57 ? M L2P 1 C57 186 1 N 1 A L2P 323 ? C58 ? M L2P 1 C58 187 1 N 1 A L2P 323 ? C59 ? M L2P 1 C59 188 1 N 1 A L2P 323 ? C60 ? M L2P 1 C60 189 1 N 1 A L2P 324 ? C1 ? N L2P 1 C1 190 1 N 1 A L2P 324 ? O1 ? N L2P 1 O1 191 1 N 1 A L2P 324 ? C2 ? N L2P 1 C2 192 1 N 1 A L2P 324 ? O2 ? N L2P 1 O2 193 1 N 1 A L2P 324 ? C3 ? N L2P 1 C3 194 1 N 1 A L2P 324 ? O3 ? N L2P 1 O3 195 1 N 1 A L2P 324 ? C11 ? N L2P 1 C11 196 1 N 1 A L2P 324 ? C12 ? N L2P 1 C12 197 1 N 1 A L2P 324 ? C13 ? N L2P 1 C13 198 1 N 1 A L2P 324 ? C14 ? N L2P 1 C14 199 1 N 1 A L2P 324 ? C15 ? N L2P 1 C15 200 1 N 1 A L2P 324 ? C16 ? N L2P 1 C16 201 1 N 1 A L2P 324 ? C17 ? N L2P 1 C17 202 1 N 1 A L2P 324 ? C18 ? N L2P 1 C18 203 1 N 1 A L2P 324 ? C19 ? N L2P 1 C19 204 1 N 1 A L2P 324 ? C20 ? N L2P 1 C20 205 1 N 1 A L2P 324 ? C21 ? N L2P 1 C21 206 1 N 1 A L2P 324 ? C22 ? N L2P 1 C22 207 1 N 1 A L2P 324 ? C23 ? N L2P 1 C23 208 1 N 1 A L2P 324 ? C24 ? N L2P 1 C24 209 1 N 1 A L2P 324 ? C25 ? N L2P 1 C25 210 1 N 1 A L2P 324 ? C26 ? N L2P 1 C26 211 1 N 1 A L2P 324 ? C27 ? N L2P 1 C27 212 1 N 1 A L2P 324 ? C28 ? N L2P 1 C28 213 1 N 1 A L2P 324 ? C29 ? N L2P 1 C29 214 1 N 1 A L2P 324 ? C30 ? N L2P 1 C30 215 1 N 1 A L2P 324 ? C41 ? N L2P 1 C41 216 1 N 1 A L2P 324 ? C42 ? N L2P 1 C42 217 1 N 1 A L2P 324 ? C43 ? N L2P 1 C43 218 1 N 1 A L2P 324 ? C44 ? N L2P 1 C44 219 1 N 1 A L2P 324 ? C49 ? N L2P 1 C49 220 1 N 1 A L2P 324 ? C54 ? N L2P 1 C54 221 1 N 1 A L2P 324 ? C59 ? N L2P 1 C59 222 1 N 1 A L2P 324 ? C60 ? N L2P 1 C60 223 1 N 1 A L2P 327 ? C1 ? O L2P 1 C1 224 1 N 1 A L2P 327 ? O1 ? O L2P 1 O1 225 1 N 1 A L2P 327 ? C2 ? O L2P 1 C2 226 1 N 1 A L2P 327 ? O2 ? O L2P 1 O2 227 1 N 1 A L2P 327 ? C3 ? O L2P 1 C3 228 1 N 1 A L2P 327 ? O3 ? O L2P 1 O3 229 1 N 1 A L2P 327 ? C11 ? O L2P 1 C11 230 1 N 1 A L2P 327 ? C12 ? O L2P 1 C12 231 1 N 1 A L2P 327 ? C13 ? O L2P 1 C13 232 1 N 1 A L2P 327 ? C14 ? O L2P 1 C14 233 1 N 1 A L2P 327 ? C15 ? O L2P 1 C15 234 1 N 1 A L2P 327 ? C16 ? O L2P 1 C16 235 1 N 1 A L2P 327 ? C17 ? O L2P 1 C17 236 1 N 1 A L2P 327 ? C19 ? O L2P 1 C19 237 1 N 1 A L2P 327 ? C24 ? O L2P 1 C24 238 1 N 1 A L2P 327 ? C30 ? O L2P 1 C30 239 1 N 1 A L2P 327 ? C41 ? O L2P 1 C41 240 1 N 1 A L2P 327 ? C42 ? O L2P 1 C42 241 1 N 1 A L2P 327 ? C43 ? O L2P 1 C43 242 1 N 1 A L2P 327 ? C44 ? O L2P 1 C44 243 1 N 1 A L2P 327 ? C45 ? O L2P 1 C45 244 1 N 1 A L2P 327 ? C46 ? O L2P 1 C46 245 1 N 1 A L2P 327 ? C47 ? O L2P 1 C47 246 1 N 1 A L2P 327 ? C48 ? O L2P 1 C48 247 1 N 1 A L2P 327 ? C49 ? O L2P 1 C49 248 1 N 1 A L2P 327 ? C50 ? O L2P 1 C50 249 1 N 1 A L2P 327 ? C51 ? O L2P 1 C51 250 1 N 1 A L2P 327 ? C52 ? O L2P 1 C52 251 1 N 1 A L2P 327 ? C53 ? O L2P 1 C53 252 1 N 1 A L2P 327 ? C54 ? O L2P 1 C54 253 1 N 1 A L2P 327 ? C55 ? O L2P 1 C55 254 1 N 1 A L2P 327 ? C56 ? O L2P 1 C56 255 1 N 1 A L2P 327 ? C57 ? O L2P 1 C57 256 1 N 1 A L2P 327 ? C58 ? O L2P 1 C58 257 1 N 1 A L2P 327 ? C59 ? O L2P 1 C59 258 1 N 1 A L2P 327 ? C60 ? O L2P 1 C60 259 1 N 1 A L2P 328 ? C1 ? P L2P 1 C1 260 1 N 1 A L2P 328 ? O1 ? P L2P 1 O1 261 1 N 1 A L2P 328 ? C2 ? P L2P 1 C2 262 1 N 1 A L2P 328 ? O2 ? P L2P 1 O2 263 1 N 1 A L2P 328 ? C3 ? P L2P 1 C3 264 1 N 1 A L2P 328 ? O3 ? P L2P 1 O3 265 1 N 1 A L2P 328 ? C11 ? P L2P 1 C11 266 1 N 1 A L2P 328 ? C12 ? P L2P 1 C12 267 1 N 1 A L2P 328 ? C13 ? P L2P 1 C13 268 1 N 1 A L2P 328 ? C14 ? P L2P 1 C14 269 1 N 1 A L2P 328 ? C15 ? P L2P 1 C15 270 1 N 1 A L2P 328 ? C16 ? P L2P 1 C16 271 1 N 1 A L2P 328 ? C17 ? P L2P 1 C17 272 1 N 1 A L2P 328 ? C18 ? P L2P 1 C18 273 1 N 1 A L2P 328 ? C19 ? P L2P 1 C19 274 1 N 1 A L2P 328 ? C24 ? P L2P 1 C24 275 1 N 1 A L2P 328 ? C29 ? P L2P 1 C29 276 1 N 1 A L2P 328 ? C30 ? P L2P 1 C30 277 1 N 1 A L2P 328 ? C41 ? P L2P 1 C41 278 1 N 1 A L2P 328 ? C42 ? P L2P 1 C42 279 1 N 1 A L2P 328 ? C43 ? P L2P 1 C43 280 1 N 1 A L2P 328 ? C44 ? P L2P 1 C44 281 1 N 1 A L2P 328 ? C45 ? P L2P 1 C45 282 1 N 1 A L2P 328 ? C46 ? P L2P 1 C46 283 1 N 1 A L2P 328 ? C47 ? P L2P 1 C47 284 1 N 1 A L2P 328 ? C48 ? P L2P 1 C48 285 1 N 1 A L2P 328 ? C49 ? P L2P 1 C49 286 1 N 1 A L2P 328 ? C50 ? P L2P 1 C50 287 1 N 1 A L2P 328 ? C51 ? P L2P 1 C51 288 1 N 1 A L2P 328 ? C52 ? P L2P 1 C52 289 1 N 1 A L2P 328 ? C53 ? P L2P 1 C53 290 1 N 1 A L2P 328 ? C54 ? P L2P 1 C54 291 1 N 1 A L2P 328 ? C55 ? P L2P 1 C55 292 1 N 1 A L2P 328 ? C56 ? P L2P 1 C56 293 1 N 1 A L2P 328 ? C57 ? P L2P 1 C57 294 1 N 1 A L2P 328 ? C58 ? P L2P 1 C58 295 1 N 1 A L2P 328 ? C59 ? P L2P 1 C59 296 1 N 1 A L2P 328 ? C60 ? P L2P 1 C60 297 1 N 1 A L2P 333 ? C2 ? Q L2P 1 C2 298 1 N 1 A L2P 333 ? O2 ? Q L2P 1 O2 299 1 N 1 A L2P 333 ? C3 ? Q L2P 1 C3 300 1 N 1 A L2P 333 ? O3 ? Q L2P 1 O3 301 1 N 1 A L2P 333 ? C14 ? Q L2P 1 C14 302 1 N 1 A L2P 333 ? C19 ? Q L2P 1 C19 303 1 N 1 A L2P 333 ? C24 ? Q L2P 1 C24 304 1 N 1 A L2P 333 ? C30 ? Q L2P 1 C30 305 1 N 1 A L2P 333 ? C41 ? Q L2P 1 C41 306 1 N 1 A L2P 333 ? C42 ? Q L2P 1 C42 307 1 N 1 A L2P 333 ? C43 ? Q L2P 1 C43 308 1 N 1 A L2P 333 ? C44 ? Q L2P 1 C44 309 1 N 1 A L2P 333 ? C45 ? Q L2P 1 C45 310 1 N 1 A L2P 333 ? C46 ? Q L2P 1 C46 311 1 N 1 A L2P 333 ? C47 ? Q L2P 1 C47 312 1 N 1 A L2P 333 ? C48 ? Q L2P 1 C48 313 1 N 1 A L2P 333 ? C49 ? Q L2P 1 C49 314 1 N 1 A L2P 333 ? C50 ? Q L2P 1 C50 315 1 N 1 A L2P 333 ? C51 ? Q L2P 1 C51 316 1 N 1 A L2P 333 ? C52 ? Q L2P 1 C52 317 1 N 1 A L2P 333 ? C53 ? Q L2P 1 C53 318 1 N 1 A L2P 333 ? C54 ? Q L2P 1 C54 319 1 N 1 A L2P 333 ? C55 ? Q L2P 1 C55 320 1 N 1 A L2P 333 ? C56 ? Q L2P 1 C56 321 1 N 1 A L2P 333 ? C57 ? Q L2P 1 C57 322 1 N 1 A L2P 333 ? C58 ? Q L2P 1 C58 323 1 N 1 A L2P 333 ? C59 ? Q L2P 1 C59 324 1 N 1 A L2P 333 ? C60 ? Q L2P 1 C60 325 1 N 1 A SQU 341 ? C1 ? R SQU 1 C1 326 1 N 1 A SQU 341 ? C2 ? R SQU 1 C2 327 1 N 1 A SQU 341 ? C3 ? R SQU 1 C3 328 1 N 1 A SQU 341 ? C4 ? R SQU 1 C4 329 1 N 1 A SQU 341 ? C5 ? R SQU 1 C5 330 1 N 1 A SQU 341 ? C6 ? R SQU 1 C6 331 1 N 1 A SQU 341 ? C7 ? R SQU 1 C7 332 1 N 1 A SQU 341 ? C9 ? R SQU 1 C9 333 1 N 1 A SQU 341 ? C10 ? R SQU 1 C10 334 1 N 1 A SQU 341 ? C11 ? R SQU 1 C11 335 1 N 1 A SQU 341 ? C12 ? R SQU 1 C12 336 1 N 1 A SQU 341 ? C13 ? R SQU 1 C13 337 1 N 1 A SQU 341 ? C14 ? R SQU 1 C14 338 1 N 1 A SQU 341 ? C15 ? R SQU 1 C15 339 1 N 1 A SQU 341 ? C16 ? R SQU 1 C16 340 1 N 1 A SQU 341 ? C17 ? R SQU 1 C17 341 1 N 1 A SQU 342 ? C1 ? S SQU 1 C1 342 1 N 1 A SQU 342 ? C2 ? S SQU 1 C2 343 1 N 1 A SQU 342 ? C3 ? S SQU 1 C3 344 1 N 1 A SQU 342 ? C4 ? S SQU 1 C4 345 1 N 1 A SQU 342 ? C5 ? S SQU 1 C5 346 1 N 1 A SQU 342 ? C6 ? S SQU 1 C6 347 1 N 1 A SQU 342 ? C7 ? S SQU 1 C7 348 1 N 1 A SQU 342 ? C9 ? S SQU 1 C9 349 1 N 1 A SQU 342 ? C10 ? S SQU 1 C10 350 1 N 1 A SQU 342 ? C11 ? S SQU 1 C11 351 1 N 1 A SQU 342 ? C12 ? S SQU 1 C12 352 1 N 1 A SQU 342 ? C13 ? S SQU 1 C13 353 1 N 1 A SQU 342 ? C14 ? S SQU 1 C14 354 1 N 1 A SQU 342 ? C15 ? S SQU 1 C15 355 1 N 1 A SQU 342 ? C16 ? S SQU 1 C16 356 1 N 1 A SQU 342 ? C17 ? S SQU 1 C17 357 1 N 1 A SQU 342 ? C18 ? S SQU 1 C18 358 1 N 1 A SQU 342 ? C20 ? S SQU 1 C20 359 1 N 1 A SQU 342 ? C29 ? S SQU 1 C29 360 1 N 1 A SQU 343 ? C1 ? T SQU 1 C1 361 1 N 1 A SQU 343 ? C2 ? T SQU 1 C2 362 1 N 1 A SQU 343 ? C3 ? T SQU 1 C3 363 1 N 1 A SQU 343 ? C4 ? T SQU 1 C4 364 1 N 1 A SQU 343 ? C5 ? T SQU 1 C5 365 1 N 1 A SQU 343 ? C6 ? T SQU 1 C6 366 1 N 1 A SQU 343 ? C7 ? T SQU 1 C7 367 1 N 1 A SQU 343 ? C9 ? T SQU 1 C9 368 1 N 1 A SQU 343 ? C10 ? T SQU 1 C10 369 1 N 1 A SQU 343 ? C11 ? T SQU 1 C11 370 1 N 1 A SQU 343 ? C12 ? T SQU 1 C12 371 1 N 1 A SQU 343 ? C13 ? T SQU 1 C13 372 1 N 1 A SQU 343 ? C14 ? T SQU 1 C14 373 1 N 1 A SQU 343 ? C15 ? T SQU 1 C15 374 1 N 1 A SQU 343 ? C16 ? T SQU 1 C16 375 1 N 1 A SQU 343 ? C17 ? T SQU 1 C17 376 1 N 1 A SQU 343 ? C28 ? T SQU 1 C28 377 1 N 1 A SQU 343 ? C29 ? T SQU 1 C29 378 1 N 1 A SQU 343 ? C30 ? T SQU 1 C30 # _pdbx_audit_support.funding_organization 'Japan Society for the Promotion of Science (JSPS)' _pdbx_audit_support.country Japan _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id RET _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id RET _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 RETINAL RET 3 2,3-DI-PHYTANYL-GLYCEROL L2P 4 2,10,23-TRIMETHYL-TETRACOSANE SQU 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5ZIL _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details ? #