HEADER HYDROLASE 02-JUN-22 7XYR TITLE CYSTAL STRUCTURE OF BETA-GLUCURONIDASE FROM BACTEROIDES TITLE 2 THETAIOTAOMICRON COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-GLUCURONIDASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.1.31; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES THETAIOTAOMICRON; SOURCE 3 ORGANISM_TAXID: 818; SOURCE 4 GENE: GAN91_07525, GAO00_01885; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA-GLUCURONIDASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR X.TENG,C.WANG REVDAT 1 05-JUL-23 7XYR 0 JRNL AUTH X.TENG,C.WANG JRNL TITL CYSTAL STRUCTURE OF BETA-GLUCURONIDASE FROM BACTEROIDES JRNL TITL 2 THETAIOTAOMICRON JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0253 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 44313 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2260 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3073 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.63 REMARK 3 BIN R VALUE (WORKING SET) : 0.2690 REMARK 3 BIN FREE R VALUE SET COUNT : 184 REMARK 3 BIN FREE R VALUE : 0.3110 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4383 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 37 REMARK 3 SOLVENT ATOMS : 452 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.00200 REMARK 3 B22 (A**2) : -0.00500 REMARK 3 B33 (A**2) : 0.00700 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.180 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.161 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.127 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.755 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4511 ; 0.009 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 4039 ; 0.002 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6133 ; 1.502 ; 1.643 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9405 ; 1.399 ; 1.573 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 543 ; 6.815 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 239 ;33.801 ;23.096 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 734 ;16.445 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;18.434 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 590 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5035 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 967 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 906 ; 0.205 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 38 ; 0.228 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2128 ; 0.173 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 363 ; 0.189 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2181 ; 1.958 ; 2.464 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2180 ; 1.951 ; 2.462 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2721 ; 2.854 ; 3.678 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2722 ; 2.853 ; 3.680 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2330 ; 2.367 ; 2.669 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2331 ; 2.366 ; 2.669 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3412 ; 3.564 ; 3.909 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3413 ; 3.563 ; 3.910 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 7XYR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1300028581. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-APR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-X REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 2.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : RIGAKU HYPIX-6000HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSALISPRO REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44460 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 23.892 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.7100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: AB INITIO PHASING REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10%PEG3350, 0.2 M NACL,0.1 M MES PH REMARK 280 5.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.56100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.56100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 50.79100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 61.12450 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 50.79100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 61.12450 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 52.56100 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 50.79100 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 61.12450 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 52.56100 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 50.79100 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 61.12450 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 971 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1024 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1145 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1151 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -1 REMARK 465 ARG A 0 REMARK 465 LYS A 1 REMARK 465 ALA A 2 REMARK 465 HIS A 3 REMARK 465 LEU A 4 REMARK 465 ILE A 5 REMARK 465 LEU A 6 REMARK 465 VAL A 7 REMARK 465 GLY A 8 REMARK 465 LEU A 9 REMARK 465 LEU A 10 REMARK 465 LEU A 11 REMARK 465 SER A 12 REMARK 465 PHE A 13 REMARK 465 ALA A 14 REMARK 465 ALA A 15 REMARK 465 ASN A 16 REMARK 465 ALA A 17 REMARK 465 THR A 18 REMARK 465 ASN A 19 REMARK 465 ASP A 20 REMARK 465 SER A 422 REMARK 465 ASN A 423 REMARK 465 VAL A 424 REMARK 465 SER A 425 REMARK 465 THR A 506 REMARK 465 SER A 507 REMARK 465 ARG A 508 REMARK 465 THR A 509 REMARK 465 LYS A 510 REMARK 465 GLU A 511 REMARK 465 ASP A 512 REMARK 465 THR A 513 REMARK 465 TRP A 514 REMARK 465 GLY A 515 REMARK 465 HIS A 516 REMARK 465 GLY A 517 REMARK 465 GLY A 518 REMARK 465 THR A 519 REMARK 465 PHE A 520 REMARK 465 THR A 521 REMARK 465 ASN A 522 REMARK 465 LYS A 588 REMARK 465 LYS A 589 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 54 CE NZ REMARK 470 LYS A 55 CG CD CE NZ REMARK 470 LYS A 77 CG CD CE NZ REMARK 470 ARG A 125 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 143 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 162 CG CD CE NZ REMARK 470 LYS A 260 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 71 44.25 -103.99 REMARK 500 ALA A 113 141.25 -170.77 REMARK 500 ALA A 179 -119.24 56.69 REMARK 500 ASN A 227 -85.11 -38.18 REMARK 500 SER A 238 -116.76 56.11 REMARK 500 ILE A 328 -106.17 59.80 REMARK 500 GLU A 377 -162.51 -127.15 REMARK 500 LEU A 460 99.05 -164.82 REMARK 500 ALA A 490 37.85 -149.06 REMARK 500 GLU A 555 -118.84 43.51 REMARK 500 LYS A 558 50.30 -103.23 REMARK 500 GLU A 571 109.44 -56.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1150 DISTANCE = 6.54 ANGSTROMS REMARK 525 HOH A1151 DISTANCE = 6.55 ANGSTROMS REMARK 525 HOH A1152 DISTANCE = 6.65 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 621 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 23 O REMARK 620 2 GLU A 25 O 98.7 REMARK 620 3 THR A 191 OG1 80.4 137.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 26 OH REMARK 620 2 GLU A 195 OE1 102.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 603 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO A 59 O REMARK 620 2 ASN A 152 O 134.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 605 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE A 72 O REMARK 620 2 TYR A 92 OH 125.8 REMARK 620 3 ILE A 188 O 95.0 104.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 631 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 113 O REMARK 620 2 GLN A 190 O 109.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 627 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 114 O REMARK 620 2 TYR A 116 O 74.4 REMARK 620 3 HIS A 130 O 148.2 79.7 REMARK 620 4 GLY A 132 O 75.9 69.9 112.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 616 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 116 OH REMARK 620 2 GLU A 397 OE2 106.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 606 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 132 O REMARK 620 2 SER A 135 O 110.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 620 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 159 OD2 REMARK 620 2 GLN A 171 OE1 141.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 618 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 161 O REMARK 620 2 GLY A 382 O 99.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 617 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 165 O REMARK 620 2 ALA A 390 O 96.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 604 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 327 O REMARK 620 2 THR A 330 OG1 91.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 612 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 374 OG1 REMARK 620 2 SER A 410 OG 100.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 630 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 377 OE1 REMARK 620 2 ALA A 415 O 90.8 REMARK 620 3 THR A 418 OG1 88.7 146.8 REMARK 620 4 THR A 453 OG1 106.1 149.8 60.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 629 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 378 O REMARK 620 2 ASN A 380 OD1 80.2 REMARK 620 3 PRO A 416 O 97.7 73.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 615 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 388 OE1 REMARK 620 2 SER A 391 OG 89.1 REMARK 620 3 THR A 428 O 128.3 106.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 613 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 417 O REMARK 620 2 ASN A 450 O 148.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 622 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 433 O REMARK 620 2 ASP A 451 O 128.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 619 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 452 O REMARK 620 2 SER A 455 OG 159.0 REMARK 620 3 PHE A 457 O 92.9 86.1 REMARK 620 N 1 2 DBREF1 7XYR A -1 589 UNP A0A6I0TE21_BACT4 DBREF2 7XYR A A0A6I0TE21 1 591 SEQRES 1 A 591 MET ARG LYS ALA HIS LEU ILE LEU VAL GLY LEU LEU LEU SEQRES 2 A 591 SER PHE ALA ALA ASN ALA THR ASN ASP ILE PRO ARG PRO SEQRES 3 A 591 GLU TYR PRO ARG PRO GLN PHE GLU ARG THR THR TRP VAL SEQRES 4 A 591 ASN LEU ASN GLY THR TRP THR TYR GLU PHE ASP LEU ASP SEQRES 5 A 591 ASP SER GLY LYS LYS ARG ASN LEU PRO THR ALA LYS GLU SEQRES 6 A 591 LEU SER LYS THR ILE THR VAL PRO PHE CYS PRO GLU SER SEQRES 7 A 591 LYS LEU SER GLY VAL ASN HIS THR ASP PHE ILE LYS LYS SEQRES 8 A 591 MET TRP TYR GLN ARG SER LEU PRO ILE PRO ALA ASP TRP SEQRES 9 A 591 SER ASN LYS LYS ILE LEU LEU HIS PHE GLY ALA VAL ASP SEQRES 10 A 591 TYR LEU ALA GLU ILE TYR ILE ASP GLY ARG LEU VAL GLY SEQRES 11 A 591 PHE HIS ASN GLY GLY SER SER PRO PHE VAL ILE ASP ILE SEQRES 12 A 591 SER ARG ILE ALA LYS PRO GLY ASN SER HIS ASN LEU VAL SEQRES 13 A 591 VAL SER VAL SER ASP ASP ALA LYS SER GLY ARG GLN ALA SEQRES 14 A 591 CYS GLY LYS GLN SER PRO GLU LYS ASN SER PHE ALA CYS SEQRES 15 A 591 PHE TYR THR ARG VAL THR GLY ILE TRP GLN THR VAL TRP SEQRES 16 A 591 MET GLU ALA LEU SER PRO CYS GLY LEU LYS SER ALA ASN SEQRES 17 A 591 THR TYR PRO ASP ILE ASP ASN ASN GLN LEU ILE ILE THR SEQRES 18 A 591 PRO GLU PHE TYR GLN ILE SER ASN ASP GLN THR LEU GLU SEQRES 19 A 591 VAL THR ILE TYR ASP SER GLN LYS LYS VAL ALA GLN VAL SEQRES 20 A 591 THR SER LYS CYS ALA ASN GLY SER ASN LEU ILE LEU PRO SEQRES 21 A 591 ILE LYS ASN ILE LYS LEU TRP SER PRO GLU THR PRO HIS SEQRES 22 A 591 LEU TYR ASP ILE SER TYR CYS VAL LYS ASP ALA LYS GLY SEQRES 23 A 591 GLN ILE ILE ASP GLU VAL LYS SER TYR VAL GLY MET ARG SEQRES 24 A 591 LYS VAL HIS ILE ALA ASN GLY LYS PHE TYR LEU ASN ASN SEQRES 25 A 591 GLU PRO TYR PHE GLN ARG LEU VAL MET ASN GLN GLY TYR SEQRES 26 A 591 TYR PRO ASP GLY ILE TRP THR ALA PRO THR ASP GLU ALA SEQRES 27 A 591 LEU LYS ASN ASP ILE LEU LEU SER LYS GLU ALA GLY PHE SEQRES 28 A 591 ASN GLY ALA ARG LEU HIS GLN LYS PHE PHE GLU GLU ARG SEQRES 29 A 591 PHE HIS TYR TRP ALA ASP LYS LEU GLY PHE ILE THR TRP SEQRES 30 A 591 GLY GLU SER PRO ASN TRP GLY MET ASN PRO ASP ASP GLU SEQRES 31 A 591 VAL ALA SER ARG ASN LEU LEU SER GLU TRP ILE GLU ILE SEQRES 32 A 591 LEU GLU ARG ASP ARG ASN HIS PRO SER ILE ILE THR TRP SEQRES 33 A 591 ALA PRO LEU THR VAL PRO LEU SER ASN VAL SER SER GLY SEQRES 34 A 591 THR PHE ALA ARG LEU VAL PHE ASP LEU GLN LYS LEU THR SEQRES 35 A 591 LYS ALA ILE ASP PRO SER ARG PRO PHE ASN ASP LEU THR SEQRES 36 A 591 GLY SER GLY PHE HIS PHE LEU THR ASP ILE TRP SER ILE SEQRES 37 A 591 SER THR TYR GLU PRO ASP ALA THR ARG PHE ALA LEU SER SEQRES 38 A 591 LEU LYS PRO ASP LYS ASN GLN ALA ALA TYR ALA ASN GLN SEQRES 39 A 591 PRO PHE ILE ILE GLY GLU PHE GLY GLY ILE VAL TRP GLU SEQRES 40 A 591 THR SER ARG THR LYS GLU ASP THR TRP GLY HIS GLY GLY SEQRES 41 A 591 THR PHE THR ASN GLU ASP ALA LEU PHE GLU ARG ILE GLU SEQRES 42 A 591 LYS LEU ILE ASN ALA ILE GLN SER SER GLY ILE ILE SER SEQRES 43 A 591 GLY PHE CYS TYR THR GLN PHE SER ASP ILE GLU GLN GLU SEQRES 44 A 591 LYS ASN GLY ILE TYR THR TYR ASP ARG GLN PRO LYS PHE SEQRES 45 A 591 GLU MET GLU ARG ILE ARG SER ILE PHE GLU LYS ILE PRO SEQRES 46 A 591 SER ARG PRO ILE LYS LYS HET MG A 601 1 HET MG A 602 1 HET MG A 603 1 HET MG A 604 1 HET MG A 605 1 HET MG A 606 1 HET MG A 607 1 HET MG A 608 1 HET MG A 609 1 HET MG A 610 1 HET MG A 611 1 HET MG A 612 1 HET MG A 613 1 HET MG A 614 1 HET MG A 615 1 HET MG A 616 1 HET MG A 617 1 HET MG A 618 1 HET MG A 619 1 HET MG A 620 1 HET MG A 621 1 HET NA A 622 1 HET NA A 623 1 HET NA A 624 1 HET NA A 625 1 HET NA A 626 1 HET NA A 627 1 HET NA A 628 1 HET NA A 629 1 HET NA A 630 1 HET MG A 631 1 HET GOL A 632 6 HETNAM MG MAGNESIUM ION HETNAM NA SODIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 MG 22(MG 2+) FORMUL 23 NA 9(NA 1+) FORMUL 33 GOL C3 H8 O3 FORMUL 34 HOH *452(H2 O) HELIX 1 AA1 ASN A 57 ALA A 61 5 5 HELIX 2 AA2 PRO A 99 SER A 103 5 5 HELIX 3 AA3 ASP A 160 GLY A 164 5 5 HELIX 4 AA4 ILE A 211 ASN A 213 5 3 HELIX 5 AA5 THR A 333 ALA A 347 1 15 HELIX 6 AA6 GLU A 360 GLY A 371 1 12 HELIX 7 AA7 ASP A 387 ARG A 406 1 20 HELIX 8 AA8 GLY A 427 ASP A 444 1 18 HELIX 9 AA9 ASP A 472 SER A 479 1 8 HELIX 10 AB1 ASP A 524 GLY A 541 1 18 HELIX 11 AB2 GLU A 571 GLU A 580 1 10 SHEET 1 AA1 4 TRP A 36 ASN A 38 0 SHEET 2 AA1 4 VAL A 192 LEU A 197 -1 O MET A 194 N VAL A 37 SHEET 3 AA1 4 LYS A 106 PHE A 111 -1 N LYS A 106 O LEU A 197 SHEET 4 AA1 4 PHE A 137 ASP A 140 -1 O ILE A 139 N LEU A 109 SHEET 1 AA2 6 LYS A 66 VAL A 70 0 SHEET 2 AA2 6 GLY A 41 PHE A 47 -1 N GLY A 41 O VAL A 70 SHEET 3 AA2 6 LYS A 89 PRO A 97 -1 O GLN A 93 N THR A 44 SHEET 4 AA2 6 SER A 150 SER A 158 -1 O VAL A 157 N MET A 90 SHEET 5 AA2 6 LEU A 117 ILE A 122 -1 N TYR A 121 O VAL A 154 SHEET 6 AA2 6 ARG A 125 ASN A 131 -1 O VAL A 127 N ILE A 120 SHEET 1 AA3 2 VAL A 114 ASP A 115 0 SHEET 2 AA3 2 GLY A 187 ILE A 188 -1 O GLY A 187 N ASP A 115 SHEET 1 AA4 3 LEU A 202 ASP A 210 0 SHEET 2 AA4 3 GLN A 215 PHE A 222 -1 O ILE A 217 N TYR A 208 SHEET 3 AA4 3 LEU A 255 PRO A 258 -1 O LEU A 257 N LEU A 216 SHEET 1 AA5 4 LYS A 240 LYS A 248 0 SHEET 2 AA5 4 THR A 230 ASP A 237 -1 N ASP A 237 O LYS A 240 SHEET 3 AA5 4 TYR A 273 LYS A 280 -1 O CYS A 278 N GLU A 232 SHEET 4 AA5 4 ILE A 286 VAL A 294 -1 O VAL A 290 N TYR A 277 SHEET 1 AA6 3 VAL A 299 ALA A 302 0 SHEET 2 AA6 3 LYS A 305 LEU A 308 -1 O TYR A 307 N HIS A 300 SHEET 3 AA6 3 GLU A 311 PRO A 312 -1 O GLU A 311 N LEU A 308 SHEET 1 AA7 7 ILE A 411 TRP A 414 0 SHEET 2 AA7 7 ILE A 373 GLY A 376 1 N THR A 374 O ILE A 412 SHEET 3 AA7 7 GLY A 351 LEU A 354 1 N ALA A 352 O ILE A 373 SHEET 4 AA7 7 GLN A 315 ASN A 320 1 N ASN A 320 O ARG A 353 SHEET 5 AA7 7 GLY A 545 THR A 549 1 O TYR A 548 N MET A 319 SHEET 6 AA7 7 PHE A 494 GLY A 500 1 N PHE A 499 O THR A 549 SHEET 7 AA7 7 TRP A 464 SER A 467 1 N ILE A 466 O GLY A 497 LINK O ARG A 23 MG MG A 621 1555 1555 2.73 LINK OE1 GLU A 25 MG MG A 601 1555 1555 2.75 LINK O GLU A 25 MG MG A 621 1555 1555 2.62 LINK OH TYR A 26 MG MG A 602 1555 1555 2.51 LINK O PRO A 59 MG MG A 603 1555 1555 2.88 LINK O PHE A 72 MG MG A 605 1555 1555 2.89 LINK OH TYR A 92 MG MG A 605 1555 1555 2.48 LINK O ALA A 113 MG MG A 631 1555 1555 2.77 LINK O VAL A 114 NA NA A 627 1555 1555 2.86 LINK OH TYR A 116 MG MG A 616 1555 1555 2.79 LINK O TYR A 116 NA NA A 627 1555 1555 2.91 LINK O HIS A 130 NA NA A 627 1555 1555 3.03 LINK O GLY A 132 MG MG A 606 1555 1555 2.62 LINK O GLY A 132 NA NA A 627 1555 1555 3.02 LINK OG SER A 134 MG MG A 609 1555 1555 2.89 LINK O SER A 135 MG MG A 606 1555 1555 2.59 LINK O PHE A 137 NA NA A 626 1555 1555 2.75 LINK O ASN A 152 MG MG A 603 1555 1555 2.58 LINK OD2 ASP A 159 MG MG A 620 1555 1555 2.61 LINK O ALA A 161 MG MG A 618 1555 1555 2.74 LINK O ARG A 165 MG MG A 617 1555 1555 2.83 LINK OE1 GLN A 171 MG MG A 620 1555 1555 2.47 LINK O ILE A 188 MG MG A 605 1555 1555 2.73 LINK O GLN A 190 MG MG A 631 1555 1555 2.86 LINK OG1 THR A 191 MG MG A 621 1555 1555 2.94 LINK OE1 GLU A 195 MG MG A 602 1555 1555 2.79 LINK O GLY A 327 MG MG A 604 1555 1555 2.63 LINK OG1 THR A 330 MG MG A 604 1555 1555 2.74 LINK O GLN A 356 NA NA A 623 1555 1555 2.69 LINK OG1 THR A 374 MG MG A 612 1555 1555 2.62 LINK OE1 GLU A 377 NA NA A 624 1555 1555 2.71 LINK O GLU A 377 NA NA A 628 1555 1555 2.75 LINK OE1 GLU A 377 NA NA A 630 1555 1555 3.03 LINK O SER A 378 NA NA A 629 1555 1555 2.90 LINK OD1 ASN A 380 NA NA A 629 1555 1555 2.87 LINK O GLY A 382 MG MG A 618 1555 1555 2.82 LINK OE1 GLU A 388 MG MG A 615 1555 1555 2.74 LINK O ALA A 390 MG MG A 617 1555 1555 2.91 LINK OG SER A 391 MG MG A 615 1555 1555 2.81 LINK OE2 GLU A 397 MG MG A 616 1555 1555 2.61 LINK OG SER A 410 MG MG A 612 1555 1555 2.62 LINK OG1 THR A 413 MG MG A 614 1555 1555 2.78 LINK O ALA A 415 NA NA A 630 1555 1555 2.82 LINK O PRO A 416 NA NA A 629 1555 1555 3.19 LINK O LEU A 417 MG MG A 613 1555 1555 2.77 LINK OG1 THR A 418 NA NA A 630 1555 1555 3.07 LINK O THR A 428 MG MG A 615 1555 1555 2.81 LINK O VAL A 433 NA NA A 622 1555 1555 2.98 LINK O ASN A 450 MG MG A 613 1555 1555 2.80 LINK O ASP A 451 NA NA A 622 1555 1555 3.00 LINK O LEU A 452 MG MG A 619 1555 1555 2.99 LINK OG1 THR A 453 NA NA A 630 1555 1555 2.71 LINK OG SER A 455 MG MG A 619 1555 1555 2.72 LINK O PHE A 457 MG MG A 619 1555 1555 2.84 LINK OE1 GLU A 498 MG MG A 608 1555 1555 2.61 LINK OG1 THR A 549 MG MG A 607 1555 1555 2.94 LINK O ILE A 561 MG MG A 611 1555 1555 2.98 CISPEP 1 VAL A 70 PRO A 71 0 12.10 CISPEP 2 ASP A 115 TYR A 116 0 12.45 CISPEP 3 THR A 549 GLN A 550 0 -6.72 CRYST1 101.582 122.249 105.122 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009844 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008180 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009513 0.00000