HEADER VIRAL PROTEIN/IMMUNE SYSTEM 04-JUN-22 7Y0C TITLE CRYSTAL STRUCTURE OF BD55-1403 AND SARS-COV-2 OMICRON RBD COMPND MOL_ID: 1; COMPND 2 MOLECULE: BD55-1403 FAB LIGHT CHAIN; COMPND 3 CHAIN: B, N; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: BD55-1403 FAB HEAVY CHAIN; COMPND 7 CHAIN: A, M; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: SPIKE PROTEIN S1; COMPND 11 CHAIN: E, R; COMPND 12 FRAGMENT: OMICRON RBD; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 6 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 15 2; SOURCE 16 ORGANISM_TAXID: 2697049; SOURCE 17 GENE: S, 2; SOURCE 18 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 20 EXPRESSION_SYSTEM_CELL_LINE: HEK293 KEYWDS SARS-COV-2, OMICRON VARIANTS, ANTIBODY, VIRAL PROTEIN, VIRAL PROTEIN- KEYWDS 2 IMMUNE SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Z.ZHANG,J.XIAO REVDAT 2 12-APR-23 7Y0C 1 JRNL REVDAT 1 28-SEP-22 7Y0C 0 JRNL AUTH Y.CAO,F.JIAN,Z.ZHANG,A.YISIMAYI,X.HAO,L.BAO,F.YUAN,Y.YU, JRNL AUTH 2 S.DU,J.WANG,T.XIAO,W.SONG,Y.ZHANG,P.LIU,R.AN,P.WANG,Y.WANG, JRNL AUTH 3 S.YANG,X.NIU,Y.ZHANG,Q.GU,F.SHAO,Y.HU,W.YIN,A.ZHENG,Y.WANG, JRNL AUTH 4 C.QIN,R.JIN,J.XIAO,X.S.XIE JRNL TITL RATIONAL IDENTIFICATION OF POTENT AND BROAD JRNL TITL 2 SARBECOVIRUS-NEUTRALIZING ANTIBODY COCKTAILS FROM SARS JRNL TITL 3 CONVALESCENTS. JRNL REF CELL REP V. 41 11845 2022 JRNL REFN ESSN 2211-1247 JRNL PMID 36493787 JRNL DOI 10.1016/J.CELREP.2022.111845 REMARK 2 REMARK 2 RESOLUTION. 2.94 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.94 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.37 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 40379 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 1995 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 54.3700 - 7.0800 0.98 2899 149 0.1676 0.2024 REMARK 3 2 7.0800 - 5.6200 1.00 2810 140 0.1840 0.2639 REMARK 3 3 5.6200 - 4.9100 1.00 2784 148 0.1650 0.2036 REMARK 3 4 4.9100 - 4.4600 1.00 2755 143 0.1606 0.2391 REMARK 3 5 4.4600 - 4.1400 1.00 2739 138 0.1683 0.2705 REMARK 3 6 4.1400 - 3.9000 1.00 2748 145 0.2070 0.2843 REMARK 3 7 3.9000 - 3.7000 1.00 2733 143 0.2206 0.3015 REMARK 3 8 3.7000 - 3.5400 1.00 2696 148 0.2286 0.3238 REMARK 3 9 3.5400 - 3.4100 0.99 2715 142 0.2337 0.3229 REMARK 3 10 3.4100 - 3.2900 1.00 2710 130 0.2485 0.3905 REMARK 3 11 3.2900 - 3.1900 1.00 2693 144 0.2644 0.3372 REMARK 3 12 3.1900 - 3.1000 1.00 2717 145 0.2744 0.3645 REMARK 3 13 3.0900 - 3.0100 1.00 2693 130 0.2821 0.3806 REMARK 3 14 3.0100 - 2.9400 1.00 2692 150 0.3027 0.3674 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 62.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7Y0C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1300030009. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-FEB-22 REMARK 200 TEMPERATURE (KELVIN) : 291 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : DIALS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 388638 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.940 REMARK 200 RESOLUTION RANGE LOW (A) : 54.370 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 10.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 1.6200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.94 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.05 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: AB INITIO PHASING REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, SODIUM CITRATE TRIBASIC REMARK 280 DIHYDRATE, PH 5.0, EVAPORATION, RECRYSTALLIZATION, TEMPERATURE REMARK 280 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.81500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.62450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 74.41450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 78.62450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.81500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 74.41450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6700 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A, R, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, N, M, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO E 330 REMARK 465 LYS E 331 REMARK 465 PRO R 330 REMARK 465 LYS R 331 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASN B 139 OG SER B 176 2.07 REMARK 500 OD1 ASP N 172 OG1 THR N 174 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS B 196 CB CYS B 196 SG -0.105 REMARK 500 LYS A 206 CD LYS A 206 CE 0.237 REMARK 500 LYS A 206 CE LYS A 206 NZ 0.162 REMARK 500 LYS N 209 CE LYS N 209 NZ 0.221 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS B 40 C - N - CA ANGL. DEV. = -15.5 DEGREES REMARK 500 LYS A 206 CA - CB - CG ANGL. DEV. = -22.9 DEGREES REMARK 500 LYS A 206 CD - CE - NZ ANGL. DEV. = -16.5 DEGREES REMARK 500 PHE E 347 CB - CG - CD2 ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG N 24 CG - CD - NE ANGL. DEV. = -14.4 DEGREES REMARK 500 LYS N 209 CD - CE - NZ ANGL. DEV. = -16.4 DEGREES REMARK 500 LEU M 105 CA - CB - CG ANGL. DEV. = 20.6 DEGREES REMARK 500 GLU M 153 OE1 - CD - OE2 ANGL. DEV. = -10.0 DEGREES REMARK 500 ARG R 357 CB - CG - CD ANGL. DEV. = 16.4 DEGREES REMARK 500 GLN R 409 CA - CB - CG ANGL. DEV. = 15.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO B 8 -169.61 -73.39 REMARK 500 GLU B 17 -166.52 -114.62 REMARK 500 SER B 31 -23.80 70.34 REMARK 500 PRO B 41 132.14 -34.81 REMARK 500 ALA B 52 -27.33 61.57 REMARK 500 ASP B 71 101.92 -165.51 REMARK 500 ASP B 83 7.05 -151.34 REMARK 500 VAL B 94 55.47 -91.14 REMARK 500 PRO B 96 72.07 -69.67 REMARK 500 GLN B 102 -19.12 -45.43 REMARK 500 ASP B 153 -120.70 60.86 REMARK 500 LYS B 171 -74.96 -82.74 REMARK 500 LYS B 192 -40.09 -132.09 REMARK 500 ASN A 56 17.05 40.97 REMARK 500 GLN A 101 47.44 -73.07 REMARK 500 TRP A 102 6.15 -153.41 REMARK 500 SER A 133 57.43 -96.74 REMARK 500 ASP A 149 57.90 71.69 REMARK 500 PRO A 152 -159.41 -87.99 REMARK 500 ASN A 160 57.93 35.69 REMARK 500 ALA A 163 -74.75 -56.35 REMARK 500 LEU A 194 -99.49 -111.73 REMARK 500 THR A 196 -59.21 -136.09 REMARK 500 THR E 333 -0.07 -148.03 REMARK 500 ASP E 339 -66.56 -26.08 REMARK 500 ALA E 352 46.22 -99.57 REMARK 500 ASN E 360 50.72 72.83 REMARK 500 ASN E 370 78.70 -155.98 REMARK 500 LEU E 371 -90.00 -102.21 REMARK 500 PHE E 374 71.27 61.69 REMARK 500 PHE E 377 114.17 -165.05 REMARK 500 ASN E 388 17.55 -61.94 REMARK 500 ASP E 389 -26.42 -144.53 REMARK 500 SER E 438 35.21 -146.61 REMARK 500 TYR E 449 32.07 -97.95 REMARK 500 LYS E 462 171.47 -59.88 REMARK 500 PRO E 463 -80.47 -57.74 REMARK 500 PHE E 464 50.00 -95.85 REMARK 500 THR E 470 22.46 -146.73 REMARK 500 ASN E 477 -153.89 -125.08 REMARK 500 ASN E 481 -130.75 55.76 REMARK 500 TYR E 501 154.62 -46.97 REMARK 500 HIS E 519 40.72 -90.05 REMARK 500 SER N 12 77.79 -115.80 REMARK 500 ARG N 24 117.90 -166.26 REMARK 500 GLN N 27 -156.93 -125.37 REMARK 500 TYR N 33 56.91 -113.25 REMARK 500 ALA N 52 -34.32 66.62 REMARK 500 SER N 66 146.16 -173.58 REMARK 500 ALA N 85 -159.59 -156.24 REMARK 500 REMARK 500 THIS ENTRY HAS 87 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 THR N 70 ASP N 71 -143.29 REMARK 500 PHE N 211 ASN N 212 -144.33 REMARK 500 PHE M 64 GLN M 65 -147.32 REMARK 500 SER R 469 THR R 470 139.97 REMARK 500 PRO R 479 CYS R 480 145.11 REMARK 500 GLY R 502 VAL R 503 -135.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ASP N 71 0.08 SIDE CHAIN REMARK 500 GLN M 110 0.08 SIDE CHAIN REMARK 500 GLU M 153 0.11 SIDE CHAIN REMARK 500 ARG R 357 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 CYS E 525 -11.27 REMARK 500 REMARK 500 REMARK: NULL DBREF 7Y0C B 1 214 PDB 7Y0C 7Y0C 1 214 DBREF 7Y0C A 1 218 PDB 7Y0C 7Y0C 1 218 DBREF 7Y0C E 330 528 UNP P0DTC2 SPIKE_SARS2 330 528 DBREF 7Y0C N 1 214 PDB 7Y0C 7Y0C 1 214 DBREF 7Y0C M 1 218 PDB 7Y0C 7Y0C 1 218 DBREF 7Y0C R 330 528 UNP P0DTC2 SPIKE_SARS2 330 528 SEQADV 7Y0C LYS E 331 UNP P0DTC2 ASN 331 VARIANT SEQADV 7Y0C ASP E 339 UNP P0DTC2 GLY 339 VARIANT SEQADV 7Y0C LEU E 371 UNP P0DTC2 SER 371 VARIANT SEQADV 7Y0C PRO E 373 UNP P0DTC2 SER 373 VARIANT SEQADV 7Y0C PHE E 375 UNP P0DTC2 SER 375 VARIANT SEQADV 7Y0C ASN E 417 UNP P0DTC2 LYS 417 VARIANT SEQADV 7Y0C LYS E 440 UNP P0DTC2 ASN 440 VARIANT SEQADV 7Y0C SER E 446 UNP P0DTC2 GLY 446 VARIANT SEQADV 7Y0C ASN E 477 UNP P0DTC2 SER 477 VARIANT SEQADV 7Y0C LYS E 478 UNP P0DTC2 THR 478 VARIANT SEQADV 7Y0C ALA E 484 UNP P0DTC2 GLU 484 VARIANT SEQADV 7Y0C ARG E 493 UNP P0DTC2 GLN 493 VARIANT SEQADV 7Y0C SER E 496 UNP P0DTC2 GLY 496 VARIANT SEQADV 7Y0C ARG E 498 UNP P0DTC2 GLN 498 VARIANT SEQADV 7Y0C TYR E 501 UNP P0DTC2 ASN 501 VARIANT SEQADV 7Y0C HIS E 505 UNP P0DTC2 TYR 505 VARIANT SEQADV 7Y0C LYS R 331 UNP P0DTC2 ASN 331 VARIANT SEQADV 7Y0C ASP R 339 UNP P0DTC2 GLY 339 VARIANT SEQADV 7Y0C LEU R 371 UNP P0DTC2 SER 371 VARIANT SEQADV 7Y0C PRO R 373 UNP P0DTC2 SER 373 VARIANT SEQADV 7Y0C PHE R 375 UNP P0DTC2 SER 375 VARIANT SEQADV 7Y0C ASN R 417 UNP P0DTC2 LYS 417 VARIANT SEQADV 7Y0C LYS R 440 UNP P0DTC2 ASN 440 VARIANT SEQADV 7Y0C SER R 446 UNP P0DTC2 GLY 446 VARIANT SEQADV 7Y0C ASN R 477 UNP P0DTC2 SER 477 VARIANT SEQADV 7Y0C LYS R 478 UNP P0DTC2 THR 478 VARIANT SEQADV 7Y0C ALA R 484 UNP P0DTC2 GLU 484 VARIANT SEQADV 7Y0C ARG R 493 UNP P0DTC2 GLN 493 VARIANT SEQADV 7Y0C SER R 496 UNP P0DTC2 GLY 496 VARIANT SEQADV 7Y0C ARG R 498 UNP P0DTC2 GLN 498 VARIANT SEQADV 7Y0C TYR R 501 UNP P0DTC2 ASN 501 VARIANT SEQADV 7Y0C HIS R 505 UNP P0DTC2 TYR 505 VARIANT SEQRES 1 B 214 GLU ILE VAL LEU THR GLN SER PRO GLY THR LEU SER LEU SEQRES 2 B 214 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 B 214 GLN SER ILE ASN SER ASN TYR LEU ALA TRP TYR GLN GLN SEQRES 4 B 214 LYS PRO GLY GLN ALA PRO ARG LEU LEU ILE TYR GLY ALA SEQRES 5 B 214 SER SER ARG ALA THR GLY ILE PRO ASP ARG PHE SER GLY SEQRES 6 B 214 SER GLY SER GLY THR ASP PHE THR LEU THR ILE SER ARG SEQRES 7 B 214 LEU GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN GLN SEQRES 8 B 214 TYR GLY VAL SER PRO ARG TRP THR PHE GLY GLN GLY THR SEQRES 9 B 214 LYS VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL SEQRES 10 B 214 PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY SEQRES 11 B 214 THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO SEQRES 12 B 214 ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU SEQRES 13 B 214 GLN SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SEQRES 14 B 214 SER LYS ASP SER THR TYR SER LEU SER SER THR LEU THR SEQRES 15 B 214 LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA SEQRES 16 B 214 CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR SEQRES 17 B 214 LYS SER PHE ASN ARG GLY SEQRES 1 A 218 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU MET LYS LYS SEQRES 2 A 218 PRO GLY SER SER VAL LYS VAL SER CYS GLN ALA SER GLY SEQRES 3 A 218 GLY THR PHE SER THR TYR VAL ILE SER TRP VAL ARG GLN SEQRES 4 A 218 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY GLY ILE ILE SEQRES 5 A 218 PRO ILE PHE ASN THR PRO HIS TYR ALA GLN LYS PHE GLN SEQRES 6 A 218 GLY ARG VAL THR ILE THR ALA ASP GLU SER THR SER THR SEQRES 7 A 218 ALA TYR MET GLU LEU SER SER LEU THR SER GLY ASP THR SEQRES 8 A 218 ALA VAL TYR TYR CYS ALA ARG VAL SER GLN TRP GLU LEU SEQRES 9 A 218 LEU VAL TYR TRP GLY GLN GLY THR LEU VAL THR VAL SER SEQRES 10 A 218 SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA SEQRES 11 A 218 PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU SEQRES 12 A 218 GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR SEQRES 13 A 218 VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS SEQRES 14 A 218 THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER SEQRES 15 A 218 LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY SEQRES 16 A 218 THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER SEQRES 17 A 218 ASN THR LYS VAL ASP LYS LYS VAL GLU PRO SEQRES 1 E 199 PRO LYS ILE THR ASN LEU CYS PRO PHE ASP GLU VAL PHE SEQRES 2 E 199 ASN ALA THR ARG PHE ALA SER VAL TYR ALA TRP ASN ARG SEQRES 3 E 199 LYS ARG ILE SER ASN CYS VAL ALA ASP TYR SER VAL LEU SEQRES 4 E 199 TYR ASN LEU ALA PRO PHE PHE THR PHE LYS CYS TYR GLY SEQRES 5 E 199 VAL SER PRO THR LYS LEU ASN ASP LEU CYS PHE THR ASN SEQRES 6 E 199 VAL TYR ALA ASP SER PHE VAL ILE ARG GLY ASP GLU VAL SEQRES 7 E 199 ARG GLN ILE ALA PRO GLY GLN THR GLY ASN ILE ALA ASP SEQRES 8 E 199 TYR ASN TYR LYS LEU PRO ASP ASP PHE THR GLY CYS VAL SEQRES 9 E 199 ILE ALA TRP ASN SER ASN LYS LEU ASP SER LYS VAL SER SEQRES 10 E 199 GLY ASN TYR ASN TYR LEU TYR ARG LEU PHE ARG LYS SER SEQRES 11 E 199 ASN LEU LYS PRO PHE GLU ARG ASP ILE SER THR GLU ILE SEQRES 12 E 199 TYR GLN ALA GLY ASN LYS PRO CYS ASN GLY VAL ALA GLY SEQRES 13 E 199 PHE ASN CYS TYR PHE PRO LEU ARG SER TYR SER PHE ARG SEQRES 14 E 199 PRO THR TYR GLY VAL GLY HIS GLN PRO TYR ARG VAL VAL SEQRES 15 E 199 VAL LEU SER PHE GLU LEU LEU HIS ALA PRO ALA THR VAL SEQRES 16 E 199 CYS GLY PRO LYS SEQRES 1 N 214 GLU ILE VAL LEU THR GLN SER PRO GLY THR LEU SER LEU SEQRES 2 N 214 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 N 214 GLN SER ILE ASN SER ASN TYR LEU ALA TRP TYR GLN GLN SEQRES 4 N 214 LYS PRO GLY GLN ALA PRO ARG LEU LEU ILE TYR GLY ALA SEQRES 5 N 214 SER SER ARG ALA THR GLY ILE PRO ASP ARG PHE SER GLY SEQRES 6 N 214 SER GLY SER GLY THR ASP PHE THR LEU THR ILE SER ARG SEQRES 7 N 214 LEU GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN GLN SEQRES 8 N 214 TYR GLY VAL SER PRO ARG TRP THR PHE GLY GLN GLY THR SEQRES 9 N 214 LYS VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL SEQRES 10 N 214 PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY SEQRES 11 N 214 THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO SEQRES 12 N 214 ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU SEQRES 13 N 214 GLN SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SEQRES 14 N 214 SER LYS ASP SER THR TYR SER LEU SER SER THR LEU THR SEQRES 15 N 214 LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA SEQRES 16 N 214 CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR SEQRES 17 N 214 LYS SER PHE ASN ARG GLY SEQRES 1 M 218 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU MET LYS LYS SEQRES 2 M 218 PRO GLY SER SER VAL LYS VAL SER CYS GLN ALA SER GLY SEQRES 3 M 218 GLY THR PHE SER THR TYR VAL ILE SER TRP VAL ARG GLN SEQRES 4 M 218 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY GLY ILE ILE SEQRES 5 M 218 PRO ILE PHE ASN THR PRO HIS TYR ALA GLN LYS PHE GLN SEQRES 6 M 218 GLY ARG VAL THR ILE THR ALA ASP GLU SER THR SER THR SEQRES 7 M 218 ALA TYR MET GLU LEU SER SER LEU THR SER GLY ASP THR SEQRES 8 M 218 ALA VAL TYR TYR CYS ALA ARG VAL SER GLN TRP GLU LEU SEQRES 9 M 218 LEU VAL TYR TRP GLY GLN GLY THR LEU VAL THR VAL SER SEQRES 10 M 218 SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA SEQRES 11 M 218 PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU SEQRES 12 M 218 GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR SEQRES 13 M 218 VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS SEQRES 14 M 218 THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER SEQRES 15 M 218 LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY SEQRES 16 M 218 THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER SEQRES 17 M 218 ASN THR LYS VAL ASP LYS LYS VAL GLU PRO SEQRES 1 R 199 PRO LYS ILE THR ASN LEU CYS PRO PHE ASP GLU VAL PHE SEQRES 2 R 199 ASN ALA THR ARG PHE ALA SER VAL TYR ALA TRP ASN ARG SEQRES 3 R 199 LYS ARG ILE SER ASN CYS VAL ALA ASP TYR SER VAL LEU SEQRES 4 R 199 TYR ASN LEU ALA PRO PHE PHE THR PHE LYS CYS TYR GLY SEQRES 5 R 199 VAL SER PRO THR LYS LEU ASN ASP LEU CYS PHE THR ASN SEQRES 6 R 199 VAL TYR ALA ASP SER PHE VAL ILE ARG GLY ASP GLU VAL SEQRES 7 R 199 ARG GLN ILE ALA PRO GLY GLN THR GLY ASN ILE ALA ASP SEQRES 8 R 199 TYR ASN TYR LYS LEU PRO ASP ASP PHE THR GLY CYS VAL SEQRES 9 R 199 ILE ALA TRP ASN SER ASN LYS LEU ASP SER LYS VAL SER SEQRES 10 R 199 GLY ASN TYR ASN TYR LEU TYR ARG LEU PHE ARG LYS SER SEQRES 11 R 199 ASN LEU LYS PRO PHE GLU ARG ASP ILE SER THR GLU ILE SEQRES 12 R 199 TYR GLN ALA GLY ASN LYS PRO CYS ASN GLY VAL ALA GLY SEQRES 13 R 199 PHE ASN CYS TYR PHE PRO LEU ARG SER TYR SER PHE ARG SEQRES 14 R 199 PRO THR TYR GLY VAL GLY HIS GLN PRO TYR ARG VAL VAL SEQRES 15 R 199 VAL LEU SER PHE GLU LEU LEU HIS ALA PRO ALA THR VAL SEQRES 16 R 199 CYS GLY PRO LYS HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET FUC C 4 10 HET NAG D 1 14 HET NAG D 2 14 HET FUC D 3 10 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 7 NAG 4(C8 H15 N O6) FORMUL 7 BMA C6 H12 O6 FORMUL 7 FUC 2(C6 H12 O5) HELIX 1 AA1 SER B 123 LYS B 128 1 6 HELIX 2 AA2 LYS B 185 GLU B 189 1 5 HELIX 3 AA3 THR A 28 SER A 30 5 3 HELIX 4 AA4 PRO A 53 ASN A 56 5 4 HELIX 5 AA5 THR A 87 THR A 91 5 5 HELIX 6 AA6 LYS A 206 ASN A 209 5 4 HELIX 7 AA7 PRO E 337 ASN E 343 1 7 HELIX 8 AA8 ASP E 364 ASN E 370 5 7 HELIX 9 AA9 SER E 383 ASN E 388 1 6 HELIX 10 AB1 ASP E 405 ILE E 410 5 6 HELIX 11 AB2 GLY E 416 ASN E 422 1 7 HELIX 12 AB3 SER E 438 SER E 443 1 6 HELIX 13 AB4 GLY E 502 HIS E 505 5 4 HELIX 14 AB5 SER N 123 SER N 129 1 7 HELIX 15 AB6 LYS N 185 GLU N 189 1 5 HELIX 16 AB7 THR M 28 TYR M 32 5 5 HELIX 17 AB8 GLN M 62 GLN M 65 5 4 HELIX 18 AB9 SER M 192 LEU M 194 5 3 HELIX 19 AC1 PHE R 338 ASN R 343 1 6 HELIX 20 AC2 SER R 349 TRP R 353 5 5 HELIX 21 AC3 ASP R 364 TYR R 369 5 6 HELIX 22 AC4 SER R 383 LEU R 387 5 5 HELIX 23 AC5 ASP R 405 ILE R 410 5 6 HELIX 24 AC6 GLY R 502 HIS R 505 5 4 SHEET 1 AA1 3 THR B 5 SER B 7 0 SHEET 2 AA1 3 ALA B 19 ILE B 29 -1 O SER B 22 N SER B 7 SHEET 3 AA1 3 PHE B 63 ILE B 76 -1 O LEU B 74 N LEU B 21 SHEET 1 AA2 6 THR B 10 LEU B 13 0 SHEET 2 AA2 6 THR B 104 ILE B 108 1 O GLU B 107 N LEU B 11 SHEET 3 AA2 6 ALA B 85 TYR B 92 -1 N TYR B 87 O THR B 104 SHEET 4 AA2 6 LEU B 34 GLN B 39 -1 N ALA B 35 O GLN B 90 SHEET 5 AA2 6 ARG B 46 TYR B 50 -1 O LEU B 48 N TRP B 36 SHEET 6 AA2 6 SER B 54 ARG B 55 -1 O SER B 54 N TYR B 50 SHEET 1 AA3 4 THR B 10 LEU B 13 0 SHEET 2 AA3 4 THR B 104 ILE B 108 1 O GLU B 107 N LEU B 11 SHEET 3 AA3 4 ALA B 85 TYR B 92 -1 N TYR B 87 O THR B 104 SHEET 4 AA3 4 TRP B 98 PHE B 100 -1 O THR B 99 N GLN B 91 SHEET 1 AA4 4 VAL B 117 PHE B 120 0 SHEET 2 AA4 4 THR B 131 PHE B 141 -1 O LEU B 137 N PHE B 118 SHEET 3 AA4 4 TYR B 175 SER B 184 -1 O TYR B 175 N PHE B 141 SHEET 4 AA4 4 SER B 161 VAL B 165 -1 N GLN B 162 O THR B 180 SHEET 1 AA5 4 ALA B 155 LEU B 156 0 SHEET 2 AA5 4 LYS B 147 VAL B 152 -1 N VAL B 152 O ALA B 155 SHEET 3 AA5 4 VAL B 193 THR B 199 -1 O GLU B 197 N GLN B 149 SHEET 4 AA5 4 VAL B 207 ASN B 212 -1 O VAL B 207 N VAL B 198 SHEET 1 AA6 4 LEU A 4 GLN A 6 0 SHEET 2 AA6 4 VAL A 18 ALA A 24 -1 O GLN A 23 N VAL A 5 SHEET 3 AA6 4 THR A 78 LEU A 83 -1 O ALA A 79 N CYS A 22 SHEET 4 AA6 4 ILE A 70 ASP A 73 -1 N ASP A 73 O THR A 78 SHEET 1 AA7 6 GLU A 10 LYS A 12 0 SHEET 2 AA7 6 LEU A 113 VAL A 116 1 O LEU A 113 N GLU A 10 SHEET 3 AA7 6 ALA A 92 SER A 100 -1 N ALA A 92 O VAL A 114 SHEET 4 AA7 6 TYR A 32 GLN A 39 -1 N VAL A 37 O TYR A 95 SHEET 5 AA7 6 GLU A 46 ILE A 51 -1 O ILE A 51 N ILE A 34 SHEET 6 AA7 6 PRO A 58 TYR A 60 -1 O HIS A 59 N GLY A 50 SHEET 1 AA8 4 GLU A 10 LYS A 12 0 SHEET 2 AA8 4 LEU A 113 VAL A 116 1 O LEU A 113 N GLU A 10 SHEET 3 AA8 4 ALA A 92 SER A 100 -1 N ALA A 92 O VAL A 114 SHEET 4 AA8 4 VAL A 106 TRP A 108 -1 O TYR A 107 N ARG A 98 SHEET 1 AA9 4 SER A 125 LEU A 129 0 SHEET 2 AA9 4 THR A 140 TYR A 150 -1 O GLY A 144 N LEU A 129 SHEET 3 AA9 4 TYR A 181 PRO A 190 -1 O LEU A 183 N VAL A 147 SHEET 4 AA9 4 VAL A 168 THR A 170 -1 N HIS A 169 O VAL A 186 SHEET 1 AB1 4 SER A 125 LEU A 129 0 SHEET 2 AB1 4 THR A 140 TYR A 150 -1 O GLY A 144 N LEU A 129 SHEET 3 AB1 4 TYR A 181 PRO A 190 -1 O LEU A 183 N VAL A 147 SHEET 4 AB1 4 VAL A 174 LEU A 175 -1 N VAL A 174 O SER A 182 SHEET 1 AB2 3 THR A 156 TRP A 159 0 SHEET 2 AB2 3 ILE A 200 HIS A 205 -1 O ASN A 202 N SER A 158 SHEET 3 AB2 3 THR A 210 LYS A 215 -1 O VAL A 212 N VAL A 203 SHEET 1 AB3 4 ASN E 334 LEU E 335 0 SHEET 2 AB3 4 CYS E 361 VAL E 362 1 O VAL E 362 N ASN E 334 SHEET 3 AB3 4 VAL E 524 CYS E 525 1 O CYS E 525 N CYS E 361 SHEET 4 AB3 4 CYS E 391 PHE E 392 -1 N PHE E 392 O VAL E 524 SHEET 1 AB4 5 ASN E 354 ILE E 358 0 SHEET 2 AB4 5 ASN E 394 ARG E 403 -1 O VAL E 395 N ILE E 358 SHEET 3 AB4 5 PRO E 507 GLU E 516 -1 O VAL E 512 N ASP E 398 SHEET 4 AB4 5 CYS E 432 ASN E 437 -1 N ILE E 434 O VAL E 511 SHEET 5 AB4 5 PHE E 375 CYS E 379 -1 N LYS E 378 O VAL E 433 SHEET 1 AB5 2 LEU E 452 ARG E 454 0 SHEET 2 AB5 2 LEU E 492 SER E 494 -1 O ARG E 493 N TYR E 453 SHEET 1 AB6 2 TYR E 473 GLN E 474 0 SHEET 2 AB6 2 CYS E 488 TYR E 489 -1 O TYR E 489 N TYR E 473 SHEET 1 AB7 4 LEU N 4 SER N 7 0 SHEET 2 AB7 4 ALA N 19 ALA N 25 -1 O ARG N 24 N THR N 5 SHEET 3 AB7 4 ASP N 71 ILE N 76 -1 O ILE N 76 N ALA N 19 SHEET 4 AB7 4 PHE N 63 SER N 68 -1 N SER N 64 O THR N 75 SHEET 1 AB8 6 THR N 10 LEU N 13 0 SHEET 2 AB8 6 THR N 104 ILE N 108 1 O LYS N 105 N LEU N 11 SHEET 3 AB8 6 VAL N 86 GLN N 91 -1 N TYR N 87 O THR N 104 SHEET 4 AB8 6 LEU N 34 GLN N 39 -1 N TYR N 37 O TYR N 88 SHEET 5 AB8 6 ARG N 46 TYR N 50 -1 O ARG N 46 N GLN N 38 SHEET 6 AB8 6 SER N 54 ARG N 55 -1 O SER N 54 N TYR N 50 SHEET 1 AB9 4 THR N 10 LEU N 13 0 SHEET 2 AB9 4 THR N 104 ILE N 108 1 O LYS N 105 N LEU N 11 SHEET 3 AB9 4 VAL N 86 GLN N 91 -1 N TYR N 87 O THR N 104 SHEET 4 AB9 4 THR N 99 PHE N 100 -1 O THR N 99 N GLN N 91 SHEET 1 AC1 4 SER N 116 PHE N 120 0 SHEET 2 AC1 4 THR N 131 PHE N 141 -1 O LEU N 137 N PHE N 118 SHEET 3 AC1 4 TYR N 175 SER N 184 -1 O LEU N 183 N ALA N 132 SHEET 4 AC1 4 SER N 161 GLN N 162 -1 N GLN N 162 O THR N 180 SHEET 1 AC2 4 LEU N 156 GLN N 157 0 SHEET 2 AC2 4 ALA N 146 LYS N 151 -1 N TRP N 150 O GLN N 157 SHEET 3 AC2 4 TYR N 194 HIS N 200 -1 O GLU N 197 N GLN N 149 SHEET 4 AC2 4 VAL N 207 PHE N 211 -1 O VAL N 207 N VAL N 198 SHEET 1 AC3 4 VAL M 5 GLN M 6 0 SHEET 2 AC3 4 SER M 17 GLN M 23 -1 O GLN M 23 N VAL M 5 SHEET 3 AC3 4 THR M 78 SER M 84 -1 O ALA M 79 N CYS M 22 SHEET 4 AC3 4 VAL M 68 ASP M 73 -1 N THR M 71 O TYR M 80 SHEET 1 AC4 6 GLU M 10 LYS M 12 0 SHEET 2 AC4 6 THR M 112 VAL M 116 1 O THR M 115 N GLU M 10 SHEET 3 AC4 6 ALA M 92 VAL M 99 -1 N TYR M 94 O THR M 112 SHEET 4 AC4 6 VAL M 33 GLN M 39 -1 N VAL M 37 O TYR M 95 SHEET 5 AC4 6 GLU M 46 ILE M 51 -1 O ILE M 51 N ILE M 34 SHEET 6 AC4 6 HIS M 59 TYR M 60 -1 O HIS M 59 N GLY M 50 SHEET 1 AC5 4 GLU M 10 LYS M 12 0 SHEET 2 AC5 4 THR M 112 VAL M 116 1 O THR M 115 N GLU M 10 SHEET 3 AC5 4 ALA M 92 VAL M 99 -1 N TYR M 94 O THR M 112 SHEET 4 AC5 4 TYR M 107 TRP M 108 -1 O TYR M 107 N ARG M 98 SHEET 1 AC6 4 SER M 125 LEU M 129 0 SHEET 2 AC6 4 THR M 140 TYR M 150 -1 O LYS M 148 N SER M 125 SHEET 3 AC6 4 TYR M 181 PRO M 190 -1 O VAL M 189 N ALA M 141 SHEET 4 AC6 4 VAL M 168 THR M 170 -1 N HIS M 169 O VAL M 186 SHEET 1 AC7 4 SER M 125 LEU M 129 0 SHEET 2 AC7 4 THR M 140 TYR M 150 -1 O LYS M 148 N SER M 125 SHEET 3 AC7 4 TYR M 181 PRO M 190 -1 O VAL M 189 N ALA M 141 SHEET 4 AC7 4 VAL M 174 LEU M 175 -1 N VAL M 174 O SER M 182 SHEET 1 AC8 3 THR M 156 TRP M 159 0 SHEET 2 AC8 3 TYR M 199 HIS M 205 -1 O ASN M 202 N SER M 158 SHEET 3 AC8 3 THR M 210 VAL M 216 -1 O VAL M 216 N TYR M 199 SHEET 1 AC9 4 ASN R 354 ILE R 358 0 SHEET 2 AC9 4 ASN R 394 ARG R 403 -1 O VAL R 395 N ILE R 358 SHEET 3 AC9 4 PRO R 507 GLU R 516 -1 O TYR R 508 N ILE R 402 SHEET 4 AC9 4 GLY R 431 ASN R 437 -1 N ILE R 434 O VAL R 511 SHEET 1 AD1 3 CYS R 361 VAL R 362 0 SHEET 2 AD1 3 VAL R 524 CYS R 525 1 O CYS R 525 N CYS R 361 SHEET 3 AD1 3 CYS R 391 PHE R 392 -1 N PHE R 392 O VAL R 524 SHEET 1 AD2 2 LEU R 452 ARG R 454 0 SHEET 2 AD2 2 LEU R 492 SER R 494 -1 O ARG R 493 N TYR R 453 SHEET 1 AD3 2 TYR R 473 GLN R 474 0 SHEET 2 AD3 2 CYS R 488 TYR R 489 -1 O TYR R 489 N TYR R 473 SSBOND 1 CYS B 23 CYS B 89 1555 1555 2.11 SSBOND 2 CYS B 136 CYS B 196 1555 1555 2.08 SSBOND 3 CYS A 22 CYS A 96 1555 1555 2.06 SSBOND 4 CYS A 145 CYS A 201 1555 1555 2.05 SSBOND 5 CYS E 336 CYS E 361 1555 1555 2.07 SSBOND 6 CYS E 379 CYS E 432 1555 1555 2.08 SSBOND 7 CYS E 391 CYS E 525 1555 1555 2.08 SSBOND 8 CYS N 23 CYS N 89 1555 1555 2.11 SSBOND 9 CYS N 136 CYS N 196 1555 1555 2.04 SSBOND 10 CYS M 22 CYS M 96 1555 1555 2.08 SSBOND 11 CYS M 145 CYS M 201 1555 1555 2.06 SSBOND 12 CYS R 336 CYS R 361 1555 1555 2.09 SSBOND 13 CYS R 379 CYS R 432 1555 1555 2.09 SSBOND 14 CYS R 391 CYS R 525 1555 1555 2.03 SSBOND 15 CYS R 480 CYS R 488 1555 1555 2.06 LINK ND2 ASN E 343 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN R 343 C1 NAG D 1 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.39 LINK O6 NAG C 1 C1 FUC C 4 1555 1555 1.40 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.46 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.45 LINK O6 NAG D 1 C1 FUC D 3 1555 1555 1.43 CISPEP 1 SER B 7 PRO B 8 0 -11.70 CISPEP 2 TYR B 142 PRO B 143 0 -5.47 CISPEP 3 PHE A 151 PRO A 152 0 -4.44 CISPEP 4 GLU A 153 PRO A 154 0 14.99 CISPEP 5 SER N 7 PRO N 8 0 -9.95 CISPEP 6 TYR N 142 PRO N 143 0 2.73 CISPEP 7 PHE M 151 PRO M 152 0 2.87 CISPEP 8 GLU M 153 PRO M 154 0 5.85 CRYST1 79.630 148.829 157.249 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012558 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006719 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006359 0.00000