HEADER OXIDOREDUCTASE 06-JUN-22 7Y0P TITLE CRYSTAL STRUCTURE OF THE P450 BM3 HEME DOMAIN MUTANT TITLE 2 F87A/T268V/A82T/I263L IN COMPLEX WITH N-IMIDAZOLYL-HEXANOYL-L- TITLE 3 PHENYLALANINE, P-CRESOL AND HYDROXYLAMINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIFUNCTIONAL CYTOCHROME P450/NADPH--P450 REDUCTASE; COMPND 3 CHAIN: B, A; COMPND 4 SYNONYM: CYTOCHROME P450(BM-3),CYTOCHROME P450BM-3,FATTY ACID COMPND 5 MONOOXYGENASE,FLAVOCYTOCHROME P450 BM3; COMPND 6 EC: 1.14.14.1,1.6.2.4; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PRIESTIA MEGATERIUM NBRC 15308 = ATCC 14581; SOURCE 3 ORGANISM_TAXID: 1348623; SOURCE 4 STRAIN: ATCC 14581 / DSM 32 / CCUG 1817 / JCM 2506 / NBRC 15308 / SOURCE 5 NCIMB 9376 / NCTC 10342 / NRRL B-14308 / VKM B-512 / FORD 19; SOURCE 6 GENE: CYP102A1, CYP102, BG04_163; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS DUAL-FUNCTIONAL SMALL MOLECULE, P450 HEME DOMAIN, COMPLEX, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.JIANG,S.DONG,Y.FENG,Z.CONG REVDAT 2 29-NOV-23 7Y0P 1 REMARK REVDAT 1 14-JUN-23 7Y0P 0 JRNL AUTH Y.JIANG,S.DONG,Y.FENG,Z.CONG JRNL TITL CRYSTAL STRUCTURE OF THE P450 BM3 HEME DOMAIN MUTANT JRNL TITL 2 F87A/T268V/A82T/I263L IN COMPLEX WITH JRNL TITL 3 N-IMIDAZOLYL-HEXANOYL-L-PHENYLALANINE, P-CRESOL AND JRNL TITL 4 HYDROXYLAMINE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.66 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 67333 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 3409 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.6600 - 5.8100 0.99 2631 125 0.1671 0.1778 REMARK 3 2 5.8100 - 4.6200 0.98 2595 128 0.1682 0.1870 REMARK 3 3 4.6200 - 4.0300 0.98 2530 154 0.1420 0.1624 REMARK 3 4 4.0300 - 3.6700 0.96 2511 137 0.1459 0.1847 REMARK 3 5 3.6600 - 3.4000 0.97 2540 142 0.1507 0.1876 REMARK 3 6 3.4000 - 3.2000 0.98 2545 130 0.1644 0.1797 REMARK 3 7 3.2000 - 3.0400 0.97 2543 134 0.1676 0.2250 REMARK 3 8 3.0400 - 2.9100 0.98 2537 157 0.1782 0.2084 REMARK 3 9 2.9100 - 2.8000 0.98 2540 153 0.1792 0.2277 REMARK 3 10 2.8000 - 2.7000 0.98 2565 133 0.1745 0.1913 REMARK 3 11 2.7000 - 2.6200 0.98 2542 126 0.1697 0.2335 REMARK 3 12 2.6200 - 2.5400 0.99 2558 151 0.1827 0.2302 REMARK 3 13 2.5400 - 2.4700 0.99 2567 135 0.1686 0.1933 REMARK 3 14 2.4700 - 2.4100 0.98 2521 141 0.1706 0.2289 REMARK 3 15 2.4100 - 2.3600 0.98 2584 136 0.1699 0.2124 REMARK 3 16 2.3600 - 2.3100 0.98 2564 132 0.1695 0.2210 REMARK 3 17 2.3100 - 2.2600 0.98 2544 149 0.1764 0.2557 REMARK 3 18 2.2600 - 2.2200 0.99 2529 145 0.1773 0.2371 REMARK 3 19 2.2200 - 2.1800 0.98 2534 143 0.1834 0.2189 REMARK 3 20 2.1800 - 2.1400 0.99 2598 127 0.1872 0.2573 REMARK 3 21 2.1400 - 2.1100 0.99 2579 133 0.1873 0.2432 REMARK 3 22 2.1100 - 2.0800 0.99 2563 149 0.1948 0.2812 REMARK 3 23 2.0800 - 2.0500 0.99 2561 113 0.2001 0.2261 REMARK 3 24 2.0500 - 2.0200 0.98 2554 141 0.2116 0.2536 REMARK 3 25 2.0200 - 1.9900 0.98 2548 136 0.2281 0.2755 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 29.2596 13.7304 30.2979 REMARK 3 T TENSOR REMARK 3 T11: 0.1772 T22: 0.1606 REMARK 3 T33: 0.1529 T12: -0.0003 REMARK 3 T13: 0.0183 T23: -0.0142 REMARK 3 L TENSOR REMARK 3 L11: 0.5767 L22: 0.3810 REMARK 3 L33: 0.2227 L12: -0.1689 REMARK 3 L13: 0.2020 L23: -0.1703 REMARK 3 S TENSOR REMARK 3 S11: -0.0057 S12: 0.0009 S13: 0.0271 REMARK 3 S21: -0.0095 S22: 0.0034 S23: -0.0055 REMARK 3 S31: -0.0107 S32: 0.0120 S33: 0.0074 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 3 THROUGH 88 OR RESID REMARK 3 90 THROUGH 455 OR RESID 501 THROUGH 601)) REMARK 3 SELECTION : (CHAIN B AND (RESID 3 THROUGH 88 OR RESID REMARK 3 90 THROUGH 455 OR RESID 501 THROUGH 601)) REMARK 3 ATOM PAIRS NUMBER : 4455 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7Y0P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1300030040. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JAN-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL10U2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97914 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67390 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 REMARK 200 RESOLUTION RANGE LOW (A) : 72.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.35800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 7EGN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.38M MGCL2, 0.1M TRIS 8.5, 12-18% REMARK 280 PEG3350, PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 72.05250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B -1 REMARK 465 MET B 0 REMARK 465 THR B 1 REMARK 465 ILE B 2 REMARK 465 ALA B 191 REMARK 465 ASN B 192 REMARK 465 LEU B 456 REMARK 465 GLU B 457 REMARK 465 HIS B 458 REMARK 465 HIS B 459 REMARK 465 HIS B 460 REMARK 465 HIS B 461 REMARK 465 HIS B 462 REMARK 465 HIS B 463 REMARK 465 GLY A -1 REMARK 465 MET A 0 REMARK 465 THR A 1 REMARK 465 ILE A 2 REMARK 465 ALA A 191 REMARK 465 ASN A 192 REMARK 465 LEU A 456 REMARK 465 GLU A 457 REMARK 465 HIS A 458 REMARK 465 HIS A 459 REMARK 465 HIS A 460 REMARK 465 HIS A 461 REMARK 465 HIS A 462 REMARK 465 HIS A 463 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 3 CG CD CE NZ REMARK 470 GLU B 4 CG CD OE1 OE2 REMARK 470 GLU B 13 CG CD OE1 OE2 REMARK 470 LYS B 31 CG CD CE NZ REMARK 470 GLN B 110 CG CD OE1 NE2 REMARK 470 ASP B 136 CB CG OD1 OD2 REMARK 470 GLU B 143 CG CD OE1 OE2 REMARK 470 PHE B 158 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN B 169 CG CD OE1 NE2 REMARK 470 ASP B 182 CG OD1 OD2 REMARK 470 GLN B 189 CG CD OE1 NE2 REMARK 470 PRO B 193 CG CD REMARK 470 ASP B 194 CG OD1 OD2 REMARK 470 ASP B 195 CB CG OD1 OD2 REMARK 470 PRO B 196 CB CG CD REMARK 470 ASP B 199 CG OD1 OD2 REMARK 470 GLU B 200 CG CD OE1 OE2 REMARK 470 LYS B 202 CG CD CE NZ REMARK 470 ARG B 203 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 210 CG CD CE NZ REMARK 470 LYS B 218 CG CD CE NZ REMARK 470 LYS B 224 CG CD CE NZ REMARK 470 ASP B 231 CG OD1 OD2 REMARK 470 LYS B 241 CD CE NZ REMARK 470 LEU B 437 CG CD1 CD2 REMARK 470 LYS B 440 CD CE NZ REMARK 470 LYS B 449 CG CD CE NZ REMARK 470 LYS A 3 CG CD CE NZ REMARK 470 GLU A 4 CG CD OE1 OE2 REMARK 470 GLU A 13 CG CD OE1 OE2 REMARK 470 LYS A 31 CG CD CE NZ REMARK 470 GLN A 110 CG CD OE1 NE2 REMARK 470 ASP A 136 CB CG OD1 OD2 REMARK 470 PHE A 158 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A 169 CG CD OE1 NE2 REMARK 470 ASP A 182 CG OD1 OD2 REMARK 470 GLN A 189 CG CD OE1 NE2 REMARK 470 PRO A 193 CG CD REMARK 470 ASP A 194 CG OD1 OD2 REMARK 470 ASP A 195 CB CG OD1 OD2 REMARK 470 PRO A 196 CB CG CD REMARK 470 ASP A 199 CG OD1 OD2 REMARK 470 GLU A 200 CG CD OE1 OE2 REMARK 470 LYS A 202 CG CD CE NZ REMARK 470 ARG A 203 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 210 CG CD CE NZ REMARK 470 LYS A 218 CG CD CE NZ REMARK 470 LYS A 224 CG CD CE NZ REMARK 470 ASP A 231 CB CG OD1 OD2 REMARK 470 LYS A 241 CG CD CE NZ REMARK 470 GLU A 292 CG CD OE1 OE2 REMARK 470 ASN A 381 CG OD1 ND2 REMARK 470 LYS A 449 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS B 15 -124.33 51.17 REMARK 500 SER B 72 170.54 -58.07 REMARK 500 ASP B 84 33.88 -90.04 REMARK 500 PHE B 158 22.83 -149.82 REMARK 500 GLU B 267 -49.68 75.73 REMARK 500 GLU B 344 -0.34 -146.05 REMARK 500 ASP B 370 44.17 -81.28 REMARK 500 THR B 436 -121.64 -105.75 REMARK 500 LYS A 15 -126.49 48.43 REMARK 500 ASP A 84 38.39 -96.36 REMARK 500 GLU A 267 -60.28 -124.08 REMARK 500 GLU A 344 -3.19 -140.99 REMARK 500 ASP A 370 42.76 -84.77 REMARK 500 THR A 436 -119.83 -111.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 400 SG REMARK 620 2 HEM B 501 NA 96.6 REMARK 620 3 HEM B 501 NB 88.0 93.1 REMARK 620 4 HEM B 501 NC 86.0 177.4 87.4 REMARK 620 5 HEM B 501 ND 95.5 88.4 176.0 90.9 REMARK 620 6 HOA B 502 N 175.9 86.5 94.5 90.9 81.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 400 SG REMARK 620 2 HEM A 501 NA 94.8 REMARK 620 3 HEM A 501 NB 91.2 90.9 REMARK 620 4 HEM A 501 NC 87.6 173.8 94.7 REMARK 620 5 HEM A 501 ND 89.8 87.2 178.0 87.1 REMARK 620 6 HOA A 502 N 176.5 85.2 92.2 92.0 86.7 REMARK 620 N 1 2 3 4 5 DBREF 7Y0P B 0 455 UNP P14779 CPXB_BACMB 1 456 DBREF 7Y0P A 0 455 UNP P14779 CPXB_BACMB 1 456 SEQADV 7Y0P GLY B -1 UNP P14779 EXPRESSION TAG SEQADV 7Y0P THR B 82 UNP P14779 ALA 83 ENGINEERED MUTATION SEQADV 7Y0P ALA B 87 UNP P14779 PHE 88 ENGINEERED MUTATION SEQADV 7Y0P LEU B 263 UNP P14779 ILE 264 ENGINEERED MUTATION SEQADV 7Y0P VAL B 268 UNP P14779 THR 269 ENGINEERED MUTATION SEQADV 7Y0P LEU B 456 UNP P14779 EXPRESSION TAG SEQADV 7Y0P GLU B 457 UNP P14779 EXPRESSION TAG SEQADV 7Y0P HIS B 458 UNP P14779 EXPRESSION TAG SEQADV 7Y0P HIS B 459 UNP P14779 EXPRESSION TAG SEQADV 7Y0P HIS B 460 UNP P14779 EXPRESSION TAG SEQADV 7Y0P HIS B 461 UNP P14779 EXPRESSION TAG SEQADV 7Y0P HIS B 462 UNP P14779 EXPRESSION TAG SEQADV 7Y0P HIS B 463 UNP P14779 EXPRESSION TAG SEQADV 7Y0P GLY A -1 UNP P14779 EXPRESSION TAG SEQADV 7Y0P THR A 82 UNP P14779 ALA 83 ENGINEERED MUTATION SEQADV 7Y0P ALA A 87 UNP P14779 PHE 88 ENGINEERED MUTATION SEQADV 7Y0P LEU A 263 UNP P14779 ILE 264 ENGINEERED MUTATION SEQADV 7Y0P VAL A 268 UNP P14779 THR 269 ENGINEERED MUTATION SEQADV 7Y0P LEU A 456 UNP P14779 EXPRESSION TAG SEQADV 7Y0P GLU A 457 UNP P14779 EXPRESSION TAG SEQADV 7Y0P HIS A 458 UNP P14779 EXPRESSION TAG SEQADV 7Y0P HIS A 459 UNP P14779 EXPRESSION TAG SEQADV 7Y0P HIS A 460 UNP P14779 EXPRESSION TAG SEQADV 7Y0P HIS A 461 UNP P14779 EXPRESSION TAG SEQADV 7Y0P HIS A 462 UNP P14779 EXPRESSION TAG SEQADV 7Y0P HIS A 463 UNP P14779 EXPRESSION TAG SEQRES 1 B 465 GLY MET THR ILE LYS GLU MET PRO GLN PRO LYS THR PHE SEQRES 2 B 465 GLY GLU LEU LYS ASN LEU PRO LEU LEU ASN THR ASP LYS SEQRES 3 B 465 PRO VAL GLN ALA LEU MET LYS ILE ALA ASP GLU LEU GLY SEQRES 4 B 465 GLU ILE PHE LYS PHE GLU ALA PRO GLY ARG VAL THR ARG SEQRES 5 B 465 TYR LEU SER SER GLN ARG LEU ILE LYS GLU ALA CYS ASP SEQRES 6 B 465 GLU SER ARG PHE ASP LYS ASN LEU SER GLN ALA LEU LYS SEQRES 7 B 465 PHE VAL ARG ASP PHE THR GLY ASP GLY LEU ALA THR SER SEQRES 8 B 465 TRP THR HIS GLU LYS ASN TRP LYS LYS ALA HIS ASN ILE SEQRES 9 B 465 LEU LEU PRO SER PHE SER GLN GLN ALA MET LYS GLY TYR SEQRES 10 B 465 HIS ALA MET MET VAL ASP ILE ALA VAL GLN LEU VAL GLN SEQRES 11 B 465 LYS TRP GLU ARG LEU ASN ALA ASP GLU HIS ILE GLU VAL SEQRES 12 B 465 PRO GLU ASP MET THR ARG LEU THR LEU ASP THR ILE GLY SEQRES 13 B 465 LEU CYS GLY PHE ASN TYR ARG PHE ASN SER PHE TYR ARG SEQRES 14 B 465 ASP GLN PRO HIS PRO PHE ILE THR SER MET VAL ARG ALA SEQRES 15 B 465 LEU ASP GLU ALA MET ASN LYS LEU GLN ARG ALA ASN PRO SEQRES 16 B 465 ASP ASP PRO ALA TYR ASP GLU ASN LYS ARG GLN PHE GLN SEQRES 17 B 465 GLU ASP ILE LYS VAL MET ASN ASP LEU VAL ASP LYS ILE SEQRES 18 B 465 ILE ALA ASP ARG LYS ALA SER GLY GLU GLN SER ASP ASP SEQRES 19 B 465 LEU LEU THR HIS MET LEU ASN GLY LYS ASP PRO GLU THR SEQRES 20 B 465 GLY GLU PRO LEU ASP ASP GLU ASN ILE ARG TYR GLN ILE SEQRES 21 B 465 ILE THR PHE LEU LEU ALA GLY HIS GLU VAL THR SER GLY SEQRES 22 B 465 LEU LEU SER PHE ALA LEU TYR PHE LEU VAL LYS ASN PRO SEQRES 23 B 465 HIS VAL LEU GLN LYS ALA ALA GLU GLU ALA ALA ARG VAL SEQRES 24 B 465 LEU VAL ASP PRO VAL PRO SER TYR LYS GLN VAL LYS GLN SEQRES 25 B 465 LEU LYS TYR VAL GLY MET VAL LEU ASN GLU ALA LEU ARG SEQRES 26 B 465 LEU TRP PRO THR ALA PRO ALA PHE SER LEU TYR ALA LYS SEQRES 27 B 465 GLU ASP THR VAL LEU GLY GLY GLU TYR PRO LEU GLU LYS SEQRES 28 B 465 GLY ASP GLU LEU MET VAL LEU ILE PRO GLN LEU HIS ARG SEQRES 29 B 465 ASP LYS THR ILE TRP GLY ASP ASP VAL GLU GLU PHE ARG SEQRES 30 B 465 PRO GLU ARG PHE GLU ASN PRO SER ALA ILE PRO GLN HIS SEQRES 31 B 465 ALA PHE LYS PRO PHE GLY ASN GLY GLN ARG ALA CYS ILE SEQRES 32 B 465 GLY GLN GLN PHE ALA LEU HIS GLU ALA THR LEU VAL LEU SEQRES 33 B 465 GLY MET MET LEU LYS HIS PHE ASP PHE GLU ASP HIS THR SEQRES 34 B 465 ASN TYR GLU LEU ASP ILE LYS GLU THR LEU THR LEU LYS SEQRES 35 B 465 PRO GLU GLY PHE VAL VAL LYS ALA LYS SER LYS LYS ILE SEQRES 36 B 465 PRO LEU LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 A 465 GLY MET THR ILE LYS GLU MET PRO GLN PRO LYS THR PHE SEQRES 2 A 465 GLY GLU LEU LYS ASN LEU PRO LEU LEU ASN THR ASP LYS SEQRES 3 A 465 PRO VAL GLN ALA LEU MET LYS ILE ALA ASP GLU LEU GLY SEQRES 4 A 465 GLU ILE PHE LYS PHE GLU ALA PRO GLY ARG VAL THR ARG SEQRES 5 A 465 TYR LEU SER SER GLN ARG LEU ILE LYS GLU ALA CYS ASP SEQRES 6 A 465 GLU SER ARG PHE ASP LYS ASN LEU SER GLN ALA LEU LYS SEQRES 7 A 465 PHE VAL ARG ASP PHE THR GLY ASP GLY LEU ALA THR SER SEQRES 8 A 465 TRP THR HIS GLU LYS ASN TRP LYS LYS ALA HIS ASN ILE SEQRES 9 A 465 LEU LEU PRO SER PHE SER GLN GLN ALA MET LYS GLY TYR SEQRES 10 A 465 HIS ALA MET MET VAL ASP ILE ALA VAL GLN LEU VAL GLN SEQRES 11 A 465 LYS TRP GLU ARG LEU ASN ALA ASP GLU HIS ILE GLU VAL SEQRES 12 A 465 PRO GLU ASP MET THR ARG LEU THR LEU ASP THR ILE GLY SEQRES 13 A 465 LEU CYS GLY PHE ASN TYR ARG PHE ASN SER PHE TYR ARG SEQRES 14 A 465 ASP GLN PRO HIS PRO PHE ILE THR SER MET VAL ARG ALA SEQRES 15 A 465 LEU ASP GLU ALA MET ASN LYS LEU GLN ARG ALA ASN PRO SEQRES 16 A 465 ASP ASP PRO ALA TYR ASP GLU ASN LYS ARG GLN PHE GLN SEQRES 17 A 465 GLU ASP ILE LYS VAL MET ASN ASP LEU VAL ASP LYS ILE SEQRES 18 A 465 ILE ALA ASP ARG LYS ALA SER GLY GLU GLN SER ASP ASP SEQRES 19 A 465 LEU LEU THR HIS MET LEU ASN GLY LYS ASP PRO GLU THR SEQRES 20 A 465 GLY GLU PRO LEU ASP ASP GLU ASN ILE ARG TYR GLN ILE SEQRES 21 A 465 ILE THR PHE LEU LEU ALA GLY HIS GLU VAL THR SER GLY SEQRES 22 A 465 LEU LEU SER PHE ALA LEU TYR PHE LEU VAL LYS ASN PRO SEQRES 23 A 465 HIS VAL LEU GLN LYS ALA ALA GLU GLU ALA ALA ARG VAL SEQRES 24 A 465 LEU VAL ASP PRO VAL PRO SER TYR LYS GLN VAL LYS GLN SEQRES 25 A 465 LEU LYS TYR VAL GLY MET VAL LEU ASN GLU ALA LEU ARG SEQRES 26 A 465 LEU TRP PRO THR ALA PRO ALA PHE SER LEU TYR ALA LYS SEQRES 27 A 465 GLU ASP THR VAL LEU GLY GLY GLU TYR PRO LEU GLU LYS SEQRES 28 A 465 GLY ASP GLU LEU MET VAL LEU ILE PRO GLN LEU HIS ARG SEQRES 29 A 465 ASP LYS THR ILE TRP GLY ASP ASP VAL GLU GLU PHE ARG SEQRES 30 A 465 PRO GLU ARG PHE GLU ASN PRO SER ALA ILE PRO GLN HIS SEQRES 31 A 465 ALA PHE LYS PRO PHE GLY ASN GLY GLN ARG ALA CYS ILE SEQRES 32 A 465 GLY GLN GLN PHE ALA LEU HIS GLU ALA THR LEU VAL LEU SEQRES 33 A 465 GLY MET MET LEU LYS HIS PHE ASP PHE GLU ASP HIS THR SEQRES 34 A 465 ASN TYR GLU LEU ASP ILE LYS GLU THR LEU THR LEU LYS SEQRES 35 A 465 PRO GLU GLY PHE VAL VAL LYS ALA LYS SER LYS LYS ILE SEQRES 36 A 465 PRO LEU LEU GLU HIS HIS HIS HIS HIS HIS HET HEM B 501 43 HET HOA B 502 2 HET IC6 B 503 24 HET IC6 B 504 24 HET PCR B 505 8 HET HEM A 501 43 HET HOA A 502 2 HET PCR A 503 8 HET IC6 A 504 24 HET IC6 A 505 24 HET PCR A 506 8 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM HOA HYDROXYAMINE HETNAM IC6 (2S)-2-(6-IMIDAZOL-1-YLHEXANOYLAMINO)-3-PHENYL- HETNAM 2 IC6 PROPANOIC ACID HETNAM PCR P-CRESOL HETSYN HEM HEME FORMUL 3 HEM 2(C34 H32 FE N4 O4) FORMUL 4 HOA 2(H3 N O) FORMUL 5 IC6 4(C18 H23 N3 O3) FORMUL 7 PCR 3(C7 H8 O) FORMUL 14 HOH *584(H2 O) HELIX 1 AA1 PHE B 11 LYS B 15 5 5 HELIX 2 AA2 ASN B 16 ASN B 21 5 6 HELIX 3 AA3 LYS B 24 GLY B 37 1 14 HELIX 4 AA4 SER B 54 CYS B 62 1 9 HELIX 5 AA5 SER B 72 GLY B 83 1 12 HELIX 6 AA6 GLU B 93 SER B 108 1 16 HELIX 7 AA7 SER B 108 ARG B 132 1 25 HELIX 8 AA8 VAL B 141 ASN B 159 1 19 HELIX 9 AA9 ASN B 163 ARG B 167 5 5 HELIX 10 AB1 HIS B 171 ARG B 190 1 20 HELIX 11 AB2 ASP B 195 ALA B 197 5 3 HELIX 12 AB3 TYR B 198 GLY B 227 1 30 HELIX 13 AB4 ASP B 232 GLY B 240 1 9 HELIX 14 AB5 ASP B 250 HIS B 266 1 17 HELIX 15 AB6 GLU B 267 ASN B 283 1 17 HELIX 16 AB7 ASN B 283 LEU B 298 1 16 HELIX 17 AB8 SER B 304 GLN B 310 1 7 HELIX 18 AB9 LEU B 311 TRP B 325 1 15 HELIX 19 AC1 ILE B 357 HIS B 361 1 5 HELIX 20 AC2 ASP B 363 GLY B 368 1 6 HELIX 21 AC3 ARG B 375 GLU B 380 5 6 HELIX 22 AC4 ASN B 381 ILE B 385 5 5 HELIX 23 AC5 ASN B 395 ALA B 399 5 5 HELIX 24 AC6 GLY B 402 HIS B 420 1 19 HELIX 25 AC7 PHE A 11 LYS A 15 5 5 HELIX 26 AC8 ASN A 16 ASN A 21 5 6 HELIX 27 AC9 LYS A 24 GLY A 37 1 14 HELIX 28 AD1 SER A 54 CYS A 62 1 9 HELIX 29 AD2 SER A 72 GLY A 83 1 12 HELIX 30 AD3 GLY A 85 SER A 89 5 5 HELIX 31 AD4 GLU A 93 LEU A 104 1 12 HELIX 32 AD5 PRO A 105 PHE A 107 5 3 HELIX 33 AD6 SER A 108 ARG A 132 1 25 HELIX 34 AD7 VAL A 141 ASN A 159 1 19 HELIX 35 AD8 ASN A 163 ARG A 167 5 5 HELIX 36 AD9 HIS A 171 ARG A 190 1 20 HELIX 37 AE1 ASP A 195 ALA A 197 5 3 HELIX 38 AE2 TYR A 198 GLY A 227 1 30 HELIX 39 AE3 ASP A 232 GLY A 240 1 9 HELIX 40 AE4 ASP A 250 GLU A 267 1 18 HELIX 41 AE5 GLU A 267 ASN A 283 1 17 HELIX 42 AE6 ASN A 283 LEU A 298 1 16 HELIX 43 AE7 SER A 304 GLN A 310 1 7 HELIX 44 AE8 LEU A 311 TRP A 325 1 15 HELIX 45 AE9 ILE A 357 HIS A 361 1 5 HELIX 46 AF1 ASP A 363 GLY A 368 1 6 HELIX 47 AF2 ARG A 375 GLU A 380 5 6 HELIX 48 AF3 ASN A 381 ILE A 385 5 5 HELIX 49 AF4 ASN A 395 ALA A 399 5 5 HELIX 50 AF5 GLY A 402 HIS A 420 1 19 SHEET 1 AA1 5 ILE B 39 ALA B 44 0 SHEET 2 AA1 5 ARG B 47 LEU B 52 -1 O THR B 49 N PHE B 42 SHEET 3 AA1 5 GLU B 352 LEU B 356 1 O MET B 354 N LEU B 52 SHEET 4 AA1 5 ALA B 330 ALA B 335 -1 N PHE B 331 O VAL B 355 SHEET 5 AA1 5 PHE B 67 ASN B 70 -1 N ASN B 70 O SER B 332 SHEET 1 AA2 3 ILE B 139 GLU B 140 0 SHEET 2 AA2 3 VAL B 445 SER B 450 -1 O VAL B 446 N ILE B 139 SHEET 3 AA2 3 PHE B 421 GLU B 424 -1 N GLU B 424 O LYS B 447 SHEET 1 AA3 2 THR B 339 LEU B 341 0 SHEET 2 AA3 2 TYR B 345 LEU B 347 -1 O LEU B 347 N THR B 339 SHEET 1 AA4 2 ILE B 433 GLU B 435 0 SHEET 2 AA4 2 LEU B 439 PRO B 441 -1 O LYS B 440 N LYS B 434 SHEET 1 AA5 5 ILE A 39 ALA A 44 0 SHEET 2 AA5 5 ARG A 47 LEU A 52 -1 O THR A 49 N PHE A 42 SHEET 3 AA5 5 GLU A 352 LEU A 356 1 O MET A 354 N LEU A 52 SHEET 4 AA5 5 ALA A 330 ALA A 335 -1 N PHE A 331 O VAL A 355 SHEET 5 AA5 5 PHE A 67 ASN A 70 -1 N ASN A 70 O SER A 332 SHEET 1 AA6 3 ILE A 139 GLU A 140 0 SHEET 2 AA6 3 VAL A 445 SER A 450 -1 O VAL A 446 N ILE A 139 SHEET 3 AA6 3 PHE A 421 GLU A 424 -1 N GLU A 424 O LYS A 447 SHEET 1 AA7 2 THR A 339 LEU A 341 0 SHEET 2 AA7 2 TYR A 345 LEU A 347 -1 O LEU A 347 N THR A 339 SHEET 1 AA8 2 ILE A 433 GLU A 435 0 SHEET 2 AA8 2 LEU A 439 PRO A 441 -1 O LYS A 440 N LYS A 434 LINK SG CYS B 400 FE HEM B 501 1555 1555 2.28 LINK FE HEM B 501 N HOA B 502 1555 1555 2.61 LINK SG CYS A 400 FE HEM A 501 1555 1555 2.28 LINK FE HEM A 501 N HOA A 502 1555 1555 2.44 CRYST1 57.244 144.105 62.836 90.00 99.94 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017469 0.000000 0.003063 0.00000 SCALE2 0.000000 0.006939 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016157 0.00000