data_7Y0W # _entry.id 7Y0W # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.368 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7Y0W pdb_00007y0w 10.2210/pdb7y0w/pdb WWPDB D_1300030045 ? ? EMDB EMD-33552 ? ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Local structure of BD55-5514 and BD55-5840 Fab and Omicron BA.1 RBD complex' _pdbx_database_related.db_id EMD-33552 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7Y0W _pdbx_database_status.recvd_initial_deposition_date 2022-06-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Zhang, Z.' 1 ? 'Xiao, J.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Cell Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2211-1247 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 41 _citation.language ? _citation.page_first 111845 _citation.page_last 111845 _citation.title 'Rational identification of potent and broad sarbecovirus-neutralizing antibody cocktails from SARS convalescents.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.celrep.2022.111845 _citation.pdbx_database_id_PubMed 36493787 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cao, Y.' 1 ? primary 'Jian, F.' 2 ? primary 'Zhang, Z.' 3 ? primary 'Yisimayi, A.' 4 ? primary 'Hao, X.' 5 ? primary 'Bao, L.' 6 ? primary 'Yuan, F.' 7 ? primary 'Yu, Y.' 8 ? primary 'Du, S.' 9 ? primary 'Wang, J.' 10 ? primary 'Xiao, T.' 11 ? primary 'Song, W.' 12 ? primary 'Zhang, Y.' 13 ? primary 'Liu, P.' 14 ? primary 'An, R.' 15 ? primary 'Wang, P.' 16 ? primary 'Wang, Y.' 17 ? primary 'Yang, S.' 18 ? primary 'Niu, X.' 19 ? primary 'Zhang, Y.' 20 ? primary 'Gu, Q.' 21 ? primary 'Shao, F.' 22 ? primary 'Hu, Y.' 23 ? primary 'Yin, W.' 24 ? primary 'Zheng, A.' 25 ? primary 'Wang, Y.' 26 ? primary 'Qin, C.' 27 ? primary 'Jin, R.' 28 ? primary 'Xiao, J.' 29 ? primary 'Xie, X.S.' 30 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7Y0W _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 7Y0W _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man BD55-5514H 13237.812 1 ? ? ? ? 2 polymer man BD55-5514L 11750.876 1 ? ? ? ? 3 polymer man BD55-5840H 13136.394 1 ? ? ? ? 4 polymer man BD55-5840L 11635.954 1 ? ? ? ? 5 polymer man 'Spike protein S1' 21983.895 1 ? ? ? ? 6 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose' 570.542 1 ? ? ? ? # _entity_name_com.entity_id 5 _entity_name_com.name 'Omicron BA.1 RBD' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;QVQLVQSGAEVKKPGSSVKVSCKASGGTFRSHVISWVRQAPGQGLEWMGGFIPLFGTTIYAQAFQGRVMISADESTSTAY MELSSLRSEDTAVYFCARLFPNGDPNSPEDGFDIWGQGTLVTV ; ;QVQLVQSGAEVKKPGSSVKVSCKASGGTFRSHVISWVRQAPGQGLEWMGGFIPLFGTTIYAQAFQGRVMISADESTSTAY MELSSLRSEDTAVYFCARLFPNGDPNSPEDGFDIWGQGTLVTV ; A ? 2 'polypeptide(L)' no no ;DIQMTQSPSSLSASVGDRVTITCQASQDIGNYLNWYQQKPGKAPKLLIYDASHLETGVPSRFSGSGSGTDFTFTISSLQP EDIATYYCQRYDDLPSYTFGQGTKVEI ; ;DIQMTQSPSSLSASVGDRVTITCQASQDIGNYLNWYQQKPGKAPKLLIYDASHLETGVPSRFSGSGSGTDFTFTISSLQP EDIATYYCQRYDDLPSYTFGQGTKVEI ; B ? 3 'polypeptide(L)' no no ;VQLAQSGSELRKPGASVKVSCDTSGHSFTSNAIHWVRQAPGQGLEWMGWINTDTGTPTYAQGFTGRFVFSLDTSARTAYL QISSLKADDTAVFYCARERDYSDYFFDYWGQGTLVTVSS ; ;VQLAQSGSELRKPGASVKVSCDTSGHSFTSNAIHWVRQAPGQGLEWMGWINTDTGTPTYAQGFTGRFVFSLDTSARTAYL QISSLKADDTAVFYCARERDYSDYFFDYWGQGTLVTVSS ; H ? 4 'polypeptide(L)' no no ;EVVMTQSPASLSVSPGERATLSCRARASLGISTDLAWYQQRPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSL QSEDSAVYYCQQYSNWPLTFGGGTKVEIK ; ;EVVMTQSPASLSVSPGERATLSCRARASLGISTDLAWYQQRPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSL QSEDSAVYYCQQYSNWPLTFGGGTKVEIK ; L ? 5 'polypeptide(L)' no no ;LCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQ TGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLRS YSFRPTYGVGHQPYRVVVLSFELLHAPATVCGK ; ;LCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQ TGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLRS YSFRPTYGVGHQPYRVVVLSFELLHAPATVCGK ; R ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 VAL n 1 3 GLN n 1 4 LEU n 1 5 VAL n 1 6 GLN n 1 7 SER n 1 8 GLY n 1 9 ALA n 1 10 GLU n 1 11 VAL n 1 12 LYS n 1 13 LYS n 1 14 PRO n 1 15 GLY n 1 16 SER n 1 17 SER n 1 18 VAL n 1 19 LYS n 1 20 VAL n 1 21 SER n 1 22 CYS n 1 23 LYS n 1 24 ALA n 1 25 SER n 1 26 GLY n 1 27 GLY n 1 28 THR n 1 29 PHE n 1 30 ARG n 1 31 SER n 1 32 HIS n 1 33 VAL n 1 34 ILE n 1 35 SER n 1 36 TRP n 1 37 VAL n 1 38 ARG n 1 39 GLN n 1 40 ALA n 1 41 PRO n 1 42 GLY n 1 43 GLN n 1 44 GLY n 1 45 LEU n 1 46 GLU n 1 47 TRP n 1 48 MET n 1 49 GLY n 1 50 GLY n 1 51 PHE n 1 52 ILE n 1 53 PRO n 1 54 LEU n 1 55 PHE n 1 56 GLY n 1 57 THR n 1 58 THR n 1 59 ILE n 1 60 TYR n 1 61 ALA n 1 62 GLN n 1 63 ALA n 1 64 PHE n 1 65 GLN n 1 66 GLY n 1 67 ARG n 1 68 VAL n 1 69 MET n 1 70 ILE n 1 71 SER n 1 72 ALA n 1 73 ASP n 1 74 GLU n 1 75 SER n 1 76 THR n 1 77 SER n 1 78 THR n 1 79 ALA n 1 80 TYR n 1 81 MET n 1 82 GLU n 1 83 LEU n 1 84 SER n 1 85 SER n 1 86 LEU n 1 87 ARG n 1 88 SER n 1 89 GLU n 1 90 ASP n 1 91 THR n 1 92 ALA n 1 93 VAL n 1 94 TYR n 1 95 PHE n 1 96 CYS n 1 97 ALA n 1 98 ARG n 1 99 LEU n 1 100 PHE n 1 101 PRO n 1 102 ASN n 1 103 GLY n 1 104 ASP n 1 105 PRO n 1 106 ASN n 1 107 SER n 1 108 PRO n 1 109 GLU n 1 110 ASP n 1 111 GLY n 1 112 PHE n 1 113 ASP n 1 114 ILE n 1 115 TRP n 1 116 GLY n 1 117 GLN n 1 118 GLY n 1 119 THR n 1 120 LEU n 1 121 VAL n 1 122 THR n 1 123 VAL n 2 1 ASP n 2 2 ILE n 2 3 GLN n 2 4 MET n 2 5 THR n 2 6 GLN n 2 7 SER n 2 8 PRO n 2 9 SER n 2 10 SER n 2 11 LEU n 2 12 SER n 2 13 ALA n 2 14 SER n 2 15 VAL n 2 16 GLY n 2 17 ASP n 2 18 ARG n 2 19 VAL n 2 20 THR n 2 21 ILE n 2 22 THR n 2 23 CYS n 2 24 GLN n 2 25 ALA n 2 26 SER n 2 27 GLN n 2 28 ASP n 2 29 ILE n 2 30 GLY n 2 31 ASN n 2 32 TYR n 2 33 LEU n 2 34 ASN n 2 35 TRP n 2 36 TYR n 2 37 GLN n 2 38 GLN n 2 39 LYS n 2 40 PRO n 2 41 GLY n 2 42 LYS n 2 43 ALA n 2 44 PRO n 2 45 LYS n 2 46 LEU n 2 47 LEU n 2 48 ILE n 2 49 TYR n 2 50 ASP n 2 51 ALA n 2 52 SER n 2 53 HIS n 2 54 LEU n 2 55 GLU n 2 56 THR n 2 57 GLY n 2 58 VAL n 2 59 PRO n 2 60 SER n 2 61 ARG n 2 62 PHE n 2 63 SER n 2 64 GLY n 2 65 SER n 2 66 GLY n 2 67 SER n 2 68 GLY n 2 69 THR n 2 70 ASP n 2 71 PHE n 2 72 THR n 2 73 PHE n 2 74 THR n 2 75 ILE n 2 76 SER n 2 77 SER n 2 78 LEU n 2 79 GLN n 2 80 PRO n 2 81 GLU n 2 82 ASP n 2 83 ILE n 2 84 ALA n 2 85 THR n 2 86 TYR n 2 87 TYR n 2 88 CYS n 2 89 GLN n 2 90 ARG n 2 91 TYR n 2 92 ASP n 2 93 ASP n 2 94 LEU n 2 95 PRO n 2 96 SER n 2 97 TYR n 2 98 THR n 2 99 PHE n 2 100 GLY n 2 101 GLN n 2 102 GLY n 2 103 THR n 2 104 LYS n 2 105 VAL n 2 106 GLU n 2 107 ILE n 3 1 VAL n 3 2 GLN n 3 3 LEU n 3 4 ALA n 3 5 GLN n 3 6 SER n 3 7 GLY n 3 8 SER n 3 9 GLU n 3 10 LEU n 3 11 ARG n 3 12 LYS n 3 13 PRO n 3 14 GLY n 3 15 ALA n 3 16 SER n 3 17 VAL n 3 18 LYS n 3 19 VAL n 3 20 SER n 3 21 CYS n 3 22 ASP n 3 23 THR n 3 24 SER n 3 25 GLY n 3 26 HIS n 3 27 SER n 3 28 PHE n 3 29 THR n 3 30 SER n 3 31 ASN n 3 32 ALA n 3 33 ILE n 3 34 HIS n 3 35 TRP n 3 36 VAL n 3 37 ARG n 3 38 GLN n 3 39 ALA n 3 40 PRO n 3 41 GLY n 3 42 GLN n 3 43 GLY n 3 44 LEU n 3 45 GLU n 3 46 TRP n 3 47 MET n 3 48 GLY n 3 49 TRP n 3 50 ILE n 3 51 ASN n 3 52 THR n 3 53 ASP n 3 54 THR n 3 55 GLY n 3 56 THR n 3 57 PRO n 3 58 THR n 3 59 TYR n 3 60 ALA n 3 61 GLN n 3 62 GLY n 3 63 PHE n 3 64 THR n 3 65 GLY n 3 66 ARG n 3 67 PHE n 3 68 VAL n 3 69 PHE n 3 70 SER n 3 71 LEU n 3 72 ASP n 3 73 THR n 3 74 SER n 3 75 ALA n 3 76 ARG n 3 77 THR n 3 78 ALA n 3 79 TYR n 3 80 LEU n 3 81 GLN n 3 82 ILE n 3 83 SER n 3 84 SER n 3 85 LEU n 3 86 LYS n 3 87 ALA n 3 88 ASP n 3 89 ASP n 3 90 THR n 3 91 ALA n 3 92 VAL n 3 93 PHE n 3 94 TYR n 3 95 CYS n 3 96 ALA n 3 97 ARG n 3 98 GLU n 3 99 ARG n 3 100 ASP n 3 101 TYR n 3 102 SER n 3 103 ASP n 3 104 TYR n 3 105 PHE n 3 106 PHE n 3 107 ASP n 3 108 TYR n 3 109 TRP n 3 110 GLY n 3 111 GLN n 3 112 GLY n 3 113 THR n 3 114 LEU n 3 115 VAL n 3 116 THR n 3 117 VAL n 3 118 SER n 3 119 SER n 4 1 GLU n 4 2 VAL n 4 3 VAL n 4 4 MET n 4 5 THR n 4 6 GLN n 4 7 SER n 4 8 PRO n 4 9 ALA n 4 10 SER n 4 11 LEU n 4 12 SER n 4 13 VAL n 4 14 SER n 4 15 PRO n 4 16 GLY n 4 17 GLU n 4 18 ARG n 4 19 ALA n 4 20 THR n 4 21 LEU n 4 22 SER n 4 23 CYS n 4 24 ARG n 4 25 ALA n 4 26 ARG n 4 27 ALA n 4 28 SER n 4 29 LEU n 4 30 GLY n 4 31 ILE n 4 32 SER n 4 33 THR n 4 34 ASP n 4 35 LEU n 4 36 ALA n 4 37 TRP n 4 38 TYR n 4 39 GLN n 4 40 GLN n 4 41 ARG n 4 42 PRO n 4 43 GLY n 4 44 GLN n 4 45 ALA n 4 46 PRO n 4 47 ARG n 4 48 LEU n 4 49 LEU n 4 50 ILE n 4 51 TYR n 4 52 GLY n 4 53 ALA n 4 54 SER n 4 55 THR n 4 56 ARG n 4 57 ALA n 4 58 THR n 4 59 GLY n 4 60 ILE n 4 61 PRO n 4 62 ALA n 4 63 ARG n 4 64 PHE n 4 65 SER n 4 66 GLY n 4 67 SER n 4 68 GLY n 4 69 SER n 4 70 GLY n 4 71 THR n 4 72 GLU n 4 73 PHE n 4 74 THR n 4 75 LEU n 4 76 THR n 4 77 ILE n 4 78 SER n 4 79 SER n 4 80 LEU n 4 81 GLN n 4 82 SER n 4 83 GLU n 4 84 ASP n 4 85 SER n 4 86 ALA n 4 87 VAL n 4 88 TYR n 4 89 TYR n 4 90 CYS n 4 91 GLN n 4 92 GLN n 4 93 TYR n 4 94 SER n 4 95 ASN n 4 96 TRP n 4 97 PRO n 4 98 LEU n 4 99 THR n 4 100 PHE n 4 101 GLY n 4 102 GLY n 4 103 GLY n 4 104 THR n 4 105 LYS n 4 106 VAL n 4 107 GLU n 4 108 ILE n 4 109 LYS n 5 1 LEU n 5 2 CYS n 5 3 PRO n 5 4 PHE n 5 5 ASP n 5 6 GLU n 5 7 VAL n 5 8 PHE n 5 9 ASN n 5 10 ALA n 5 11 THR n 5 12 ARG n 5 13 PHE n 5 14 ALA n 5 15 SER n 5 16 VAL n 5 17 TYR n 5 18 ALA n 5 19 TRP n 5 20 ASN n 5 21 ARG n 5 22 LYS n 5 23 ARG n 5 24 ILE n 5 25 SER n 5 26 ASN n 5 27 CYS n 5 28 VAL n 5 29 ALA n 5 30 ASP n 5 31 TYR n 5 32 SER n 5 33 VAL n 5 34 LEU n 5 35 TYR n 5 36 ASN n 5 37 LEU n 5 38 ALA n 5 39 PRO n 5 40 PHE n 5 41 PHE n 5 42 THR n 5 43 PHE n 5 44 LYS n 5 45 CYS n 5 46 TYR n 5 47 GLY n 5 48 VAL n 5 49 SER n 5 50 PRO n 5 51 THR n 5 52 LYS n 5 53 LEU n 5 54 ASN n 5 55 ASP n 5 56 LEU n 5 57 CYS n 5 58 PHE n 5 59 THR n 5 60 ASN n 5 61 VAL n 5 62 TYR n 5 63 ALA n 5 64 ASP n 5 65 SER n 5 66 PHE n 5 67 VAL n 5 68 ILE n 5 69 ARG n 5 70 GLY n 5 71 ASP n 5 72 GLU n 5 73 VAL n 5 74 ARG n 5 75 GLN n 5 76 ILE n 5 77 ALA n 5 78 PRO n 5 79 GLY n 5 80 GLN n 5 81 THR n 5 82 GLY n 5 83 ASN n 5 84 ILE n 5 85 ALA n 5 86 ASP n 5 87 TYR n 5 88 ASN n 5 89 TYR n 5 90 LYS n 5 91 LEU n 5 92 PRO n 5 93 ASP n 5 94 ASP n 5 95 PHE n 5 96 THR n 5 97 GLY n 5 98 CYS n 5 99 VAL n 5 100 ILE n 5 101 ALA n 5 102 TRP n 5 103 ASN n 5 104 SER n 5 105 ASN n 5 106 LYS n 5 107 LEU n 5 108 ASP n 5 109 SER n 5 110 LYS n 5 111 VAL n 5 112 SER n 5 113 GLY n 5 114 ASN n 5 115 TYR n 5 116 ASN n 5 117 TYR n 5 118 LEU n 5 119 TYR n 5 120 ARG n 5 121 LEU n 5 122 PHE n 5 123 ARG n 5 124 LYS n 5 125 SER n 5 126 ASN n 5 127 LEU n 5 128 LYS n 5 129 PRO n 5 130 PHE n 5 131 GLU n 5 132 ARG n 5 133 ASP n 5 134 ILE n 5 135 SER n 5 136 THR n 5 137 GLU n 5 138 ILE n 5 139 TYR n 5 140 GLN n 5 141 ALA n 5 142 GLY n 5 143 ASN n 5 144 LYS n 5 145 PRO n 5 146 CYS n 5 147 ASN n 5 148 GLY n 5 149 VAL n 5 150 ALA n 5 151 GLY n 5 152 PHE n 5 153 ASN n 5 154 CYS n 5 155 TYR n 5 156 PHE n 5 157 PRO n 5 158 LEU n 5 159 ARG n 5 160 SER n 5 161 TYR n 5 162 SER n 5 163 PHE n 5 164 ARG n 5 165 PRO n 5 166 THR n 5 167 TYR n 5 168 GLY n 5 169 VAL n 5 170 GLY n 5 171 HIS n 5 172 GLN n 5 173 PRO n 5 174 TYR n 5 175 ARG n 5 176 VAL n 5 177 VAL n 5 178 VAL n 5 179 LEU n 5 180 SER n 5 181 PHE n 5 182 GLU n 5 183 LEU n 5 184 LEU n 5 185 HIS n 5 186 ALA n 5 187 PRO n 5 188 ALA n 5 189 THR n 5 190 VAL n 5 191 CYS n 5 192 GLY n 5 193 LYS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 123 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 107 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 119 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 4 1 sample 'Biological sequence' 1 109 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 5 1 sample 'Biological sequence' 1 193 human ? 'S, 2' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Trichoplusia ni' 7111 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 7Y0W 7Y0W ? 1 ? 1 2 PDB 7Y0W 7Y0W ? 2 ? 1 3 PDB 7Y0W 7Y0W ? 3 ? 1 4 PDB 7Y0W 7Y0W ? 4 ? 1 5 UNP SPIKE_SARS2 P0DTC2 ? 5 ;LCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQ TGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQS YGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP ; 335 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7Y0W A 1 ? 123 ? 7Y0W 1 ? 123 ? 1 123 2 2 7Y0W B 1 ? 107 ? 7Y0W 1 ? 107 ? 1 107 3 3 7Y0W H 1 ? 119 ? 7Y0W 2 ? 120 ? 2 120 4 4 7Y0W L 1 ? 109 ? 7Y0W 1 ? 109 ? 1 109 5 5 7Y0W R 1 ? 193 ? P0DTC2 335 ? 527 ? 335 527 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 5 7Y0W ASP R 5 ? UNP P0DTC2 GLY 339 variant 339 1 5 7Y0W LEU R 37 ? UNP P0DTC2 SER 371 variant 371 2 5 7Y0W PRO R 39 ? UNP P0DTC2 SER 373 variant 373 3 5 7Y0W PHE R 41 ? UNP P0DTC2 SER 375 variant 375 4 5 7Y0W ASN R 83 ? UNP P0DTC2 LYS 417 variant 417 5 5 7Y0W LYS R 106 ? UNP P0DTC2 ASN 440 variant 440 6 5 7Y0W SER R 112 ? UNP P0DTC2 GLY 446 variant 446 7 5 7Y0W ASN R 143 ? UNP P0DTC2 SER 477 variant 477 8 5 7Y0W LYS R 144 ? UNP P0DTC2 THR 478 variant 478 9 5 7Y0W ALA R 150 ? UNP P0DTC2 GLU 484 variant 484 10 5 7Y0W ARG R 159 ? UNP P0DTC2 GLN 493 variant 493 11 5 7Y0W SER R 162 ? UNP P0DTC2 GLY 496 variant 496 12 5 7Y0W ARG R 164 ? UNP P0DTC2 GLN 498 variant 498 13 5 7Y0W TYR R 167 ? UNP P0DTC2 ASN 501 variant 501 14 5 7Y0W HIS R 171 ? UNP P0DTC2 TYR 505 variant 505 15 5 7Y0W LYS R 193 ? UNP P0DTC2 PRO 527 variant 527 16 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7Y0W _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 7Y0W _struct.title 'Local structure of BD55-5514 and BD55-5840 Fab and Omicron BA.1 RBD complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7Y0W _struct_keywords.text 'SARS-CoV-2, Omicron variants, antibody, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLN B 79 ? ILE B 83 ? GLN B 79 ILE B 83 5 ? 5 HELX_P HELX_P2 AA2 LYS C 86 ? THR C 90 ? LYS H 87 THR H 91 5 ? 5 HELX_P HELX_P3 AA3 GLN D 81 ? SER D 85 ? GLN L 81 SER L 85 5 ? 5 HELX_P HELX_P4 AA4 SER E 15 ? TRP E 19 ? SER R 349 TRP R 353 5 ? 5 HELX_P HELX_P5 AA5 ASP E 30 ? LEU E 37 ? ASP R 364 LEU R 371 5 ? 8 HELX_P HELX_P6 AA6 ASP E 71 ? VAL E 73 ? ASP R 405 VAL R 407 5 ? 3 HELX_P HELX_P7 AA7 ASN E 83 ? ASN E 88 ? ASN R 417 ASN R 422 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 96 SG ? ? A CYS 22 A CYS 96 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf2 disulf ? ? B CYS 23 SG ? ? ? 1_555 B CYS 88 SG ? ? B CYS 23 B CYS 88 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf3 disulf ? ? C CYS 21 SG ? ? ? 1_555 C CYS 95 SG ? ? H CYS 22 H CYS 96 1_555 ? ? ? ? ? ? ? 2.026 ? ? disulf4 disulf ? ? D CYS 23 SG ? ? ? 1_555 D CYS 90 SG ? ? L CYS 23 L CYS 90 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf5 disulf ? ? E CYS 2 SG ? ? ? 1_555 E CYS 27 SG ? ? R CYS 336 R CYS 361 1_555 ? ? ? ? ? ? ? 2.026 ? ? disulf6 disulf ? ? E CYS 45 SG ? ? ? 1_555 E CYS 98 SG ? ? R CYS 379 R CYS 432 1_555 ? ? ? ? ? ? ? 2.058 ? ? disulf7 disulf ? ? E CYS 57 SG ? ? ? 1_555 E CYS 191 SG ? ? R CYS 391 R CYS 525 1_555 ? ? ? ? ? ? ? 2.036 ? ? covale1 covale both ? F NAG . O4 ? ? ? 1_555 F NAG . C1 ? ? X NAG 1 X NAG 2 1_555 ? ? ? ? ? ? ? 1.432 ? ? covale2 covale both ? F NAG . O6 ? ? ? 1_555 F FUC . C1 ? ? X NAG 1 X FUC 3 1_555 ? ? ? ? ? ? ? 1.431 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 7 B . ? SER 7 B PRO 8 B ? PRO 8 B 1 -1.86 2 SER 7 D . ? SER 7 L PRO 8 D ? PRO 8 L 1 -0.52 3 PRO 15 D . ? PRO 15 L GLY 16 D ? GLY 16 L 1 -16.69 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 6 ? AA3 ? 4 ? AA4 ? 4 ? AA5 ? 3 ? AA6 ? 3 ? AA7 ? 9 ? AA8 ? 5 ? AA9 ? 4 ? AB1 ? 5 ? AB2 ? 5 ? AB3 ? 2 ? AB4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? parallel AA5 2 3 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel AA7 4 5 ? anti-parallel AA7 5 6 ? parallel AA7 6 7 ? anti-parallel AA7 7 8 ? anti-parallel AA7 8 9 ? anti-parallel AA8 1 2 ? anti-parallel AA8 2 3 ? anti-parallel AA8 3 4 ? anti-parallel AA8 4 5 ? anti-parallel AA9 1 2 ? anti-parallel AA9 2 3 ? anti-parallel AA9 3 4 ? anti-parallel AB1 1 2 ? parallel AB1 2 3 ? anti-parallel AB1 3 4 ? anti-parallel AB1 4 5 ? anti-parallel AB2 1 2 ? anti-parallel AB2 2 3 ? anti-parallel AB2 3 4 ? anti-parallel AB2 4 5 ? anti-parallel AB3 1 2 ? anti-parallel AB4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 5 ? GLN A 6 ? VAL A 5 GLN A 6 AA1 2 SER A 17 ? LYS A 23 ? SER A 17 LYS A 23 AA1 3 THR A 78 ? SER A 84 ? THR A 78 SER A 84 AA1 4 ILE A 70 ? ASP A 73 ? ILE A 70 ASP A 73 AA2 1 GLU A 10 ? VAL A 11 ? GLU A 10 VAL A 11 AA2 2 THR A 119 ? THR A 122 ? THR A 119 THR A 122 AA2 3 ALA A 92 ? ARG A 98 ? ALA A 92 ARG A 98 AA2 4 ILE A 34 ? GLN A 39 ? ILE A 34 GLN A 39 AA2 5 LEU A 45 ? PHE A 51 ? LEU A 45 PHE A 51 AA2 6 THR A 58 ? TYR A 60 ? THR A 58 TYR A 60 AA3 1 GLU A 10 ? VAL A 11 ? GLU A 10 VAL A 11 AA3 2 THR A 119 ? THR A 122 ? THR A 119 THR A 122 AA3 3 ALA A 92 ? ARG A 98 ? ALA A 92 ARG A 98 AA3 4 ILE A 114 ? TRP A 115 ? ILE A 114 TRP A 115 AA4 1 THR B 5 ? SER B 7 ? THR B 5 SER B 7 AA4 2 VAL B 19 ? GLN B 24 ? VAL B 19 GLN B 24 AA4 3 ASP B 70 ? ILE B 75 ? ASP B 70 ILE B 75 AA4 4 PHE B 62 ? SER B 65 ? PHE B 62 SER B 65 AA5 1 SER B 10 ? SER B 12 ? SER B 10 SER B 12 AA5 2 THR B 103 ? GLU B 106 ? THR B 103 GLU B 106 AA5 3 THR B 85 ? TYR B 86 ? THR B 85 TYR B 86 AA6 1 LYS B 45 ? ILE B 48 ? LYS B 45 ILE B 48 AA6 2 ASN B 34 ? GLN B 37 ? ASN B 34 GLN B 37 AA6 3 CYS B 88 ? GLN B 89 ? CYS B 88 GLN B 89 AA7 1 PRO C 57 ? TYR C 59 ? PRO H 58 TYR H 60 AA7 2 LEU C 44 ? ASN C 51 ? LEU H 45 ASN H 52 AA7 3 ALA C 32 ? GLN C 38 ? ALA H 33 GLN H 39 AA7 4 VAL C 92 ? ARG C 97 ? VAL H 93 ARG H 98 AA7 5 TYR C 108 ? GLY C 110 ? TYR H 109 GLY H 111 AA7 6 GLN C 2 ? GLN C 5 ? GLN H 3 GLN H 6 AA7 7 VAL C 17 ? ASP C 22 ? VAL H 18 ASP H 23 AA7 8 ALA C 78 ? ILE C 82 ? ALA H 79 ILE H 83 AA7 9 PHE C 67 ? LEU C 71 ? PHE H 68 LEU H 72 AA8 1 PRO C 57 ? TYR C 59 ? PRO H 58 TYR H 60 AA8 2 LEU C 44 ? ASN C 51 ? LEU H 45 ASN H 52 AA8 3 ALA C 32 ? GLN C 38 ? ALA H 33 GLN H 39 AA8 4 VAL C 92 ? ARG C 97 ? VAL H 93 ARG H 98 AA8 5 THR C 113 ? LEU C 114 ? THR H 114 LEU H 115 AA9 1 THR D 5 ? SER D 7 ? THR L 5 SER L 7 AA9 2 ALA D 19 ? ARG D 24 ? ALA L 19 ARG L 24 AA9 3 GLU D 72 ? ILE D 77 ? GLU L 72 ILE L 77 AA9 4 PHE D 64 ? SER D 69 ? PHE L 64 SER L 69 AB1 1 SER D 10 ? SER D 12 ? SER L 10 SER L 12 AB1 2 THR D 104 ? GLU D 107 ? THR L 104 GLU L 107 AB1 3 VAL D 87 ? GLN D 92 ? VAL L 87 GLN L 92 AB1 4 LEU D 35 ? GLN D 40 ? LEU L 35 GLN L 40 AB1 5 ARG D 47 ? TYR D 51 ? ARG L 47 TYR L 51 AB2 1 ASN E 20 ? ILE E 24 ? ASN R 354 ILE R 358 AB2 2 ASN E 60 ? ARG E 69 ? ASN R 394 ARG R 403 AB2 3 PRO E 173 ? GLU E 182 ? PRO R 507 GLU R 516 AB2 4 CYS E 98 ? ASN E 103 ? CYS R 432 ASN R 437 AB2 5 PHE E 41 ? CYS E 45 ? PHE R 375 CYS R 379 AB3 1 LEU E 118 ? ARG E 120 ? LEU R 452 ARG R 454 AB3 2 LEU E 158 ? SER E 160 ? LEU R 492 SER R 494 AB4 1 TYR E 139 ? GLN E 140 ? TYR R 473 GLN R 474 AB4 2 CYS E 154 ? TYR E 155 ? CYS R 488 TYR R 489 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 5 ? N VAL A 5 O LYS A 23 ? O LYS A 23 AA1 2 3 N VAL A 20 ? N VAL A 20 O MET A 81 ? O MET A 81 AA1 3 4 O THR A 78 ? O THR A 78 N ASP A 73 ? N ASP A 73 AA2 1 2 N GLU A 10 ? N GLU A 10 O THR A 122 ? O THR A 122 AA2 2 3 O THR A 119 ? O THR A 119 N TYR A 94 ? N TYR A 94 AA2 3 4 O PHE A 95 ? O PHE A 95 N VAL A 37 ? N VAL A 37 AA2 4 5 N ILE A 34 ? N ILE A 34 O PHE A 51 ? O PHE A 51 AA2 5 6 N GLY A 50 ? N GLY A 50 O ILE A 59 ? O ILE A 59 AA3 1 2 N GLU A 10 ? N GLU A 10 O THR A 122 ? O THR A 122 AA3 2 3 O THR A 119 ? O THR A 119 N TYR A 94 ? N TYR A 94 AA3 3 4 N ARG A 98 ? N ARG A 98 O ILE A 114 ? O ILE A 114 AA4 1 2 N SER B 7 ? N SER B 7 O THR B 22 ? O THR B 22 AA4 2 3 N ILE B 21 ? N ILE B 21 O PHE B 73 ? O PHE B 73 AA4 3 4 O THR B 74 ? O THR B 74 N SER B 63 ? N SER B 63 AA5 1 2 N LEU B 11 ? N LEU B 11 O LYS B 104 ? O LYS B 104 AA5 2 3 O THR B 103 ? O THR B 103 N TYR B 86 ? N TYR B 86 AA6 1 2 O ILE B 48 ? O ILE B 48 N TRP B 35 ? N TRP B 35 AA6 2 3 N ASN B 34 ? N ASN B 34 O GLN B 89 ? O GLN B 89 AA7 1 2 O THR C 58 ? O THR H 59 N TRP C 49 ? N TRP H 50 AA7 2 3 O GLY C 48 ? O GLY H 49 N TRP C 35 ? N TRP H 36 AA7 3 4 N VAL C 36 ? N VAL H 37 O TYR C 94 ? O TYR H 95 AA7 4 5 N ARG C 97 ? N ARG H 98 O TYR C 108 ? O TYR H 109 AA7 5 6 O TRP C 109 ? O TRP H 110 N LEU C 3 ? N LEU H 4 AA7 6 7 N ALA C 4 ? N ALA H 5 O ASP C 22 ? O ASP H 23 AA7 7 8 N VAL C 19 ? N VAL H 20 O LEU C 80 ? O LEU H 81 AA7 8 9 O TYR C 79 ? O TYR H 80 N SER C 70 ? N SER H 71 AA8 1 2 O THR C 58 ? O THR H 59 N TRP C 49 ? N TRP H 50 AA8 2 3 O GLY C 48 ? O GLY H 49 N TRP C 35 ? N TRP H 36 AA8 3 4 N VAL C 36 ? N VAL H 37 O TYR C 94 ? O TYR H 95 AA8 4 5 N PHE C 93 ? N PHE H 94 O THR C 113 ? O THR H 114 AA9 1 2 N THR D 5 ? N THR L 5 O ARG D 24 ? O ARG L 24 AA9 2 3 N LEU D 21 ? N LEU L 21 O LEU D 75 ? O LEU L 75 AA9 3 4 O THR D 74 ? O THR L 74 N SER D 67 ? N SER L 67 AB1 1 2 N LEU D 11 ? N LEU L 11 O GLU D 107 ? O GLU L 107 AB1 2 3 O THR D 104 ? O THR L 104 N TYR D 88 ? N TYR L 88 AB1 3 4 O VAL D 87 ? O VAL L 87 N GLN D 40 ? N GLN L 40 AB1 4 5 N TRP D 37 ? N TRP L 37 O LEU D 49 ? O LEU L 49 AB2 1 2 N LYS E 22 ? N LYS R 356 O ALA E 63 ? O ALA R 397 AB2 2 3 N ILE E 68 ? N ILE R 402 O TYR E 174 ? O TYR R 508 AB2 3 4 O VAL E 177 ? O VAL R 511 N ILE E 100 ? N ILE R 434 AB2 4 5 O ALA E 101 ? O ALA R 435 N THR E 42 ? N THR R 376 AB3 1 2 N TYR E 119 ? N TYR R 453 O ARG E 159 ? O ARG R 493 AB4 1 2 N TYR E 139 ? N TYR R 473 O TYR E 155 ? O TYR R 489 # _atom_sites.entry_id 7Y0W _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 1 1 GLN GLN A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 GLN 6 6 6 GLN GLN A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 PRO 14 14 14 PRO PRO A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 CYS 22 22 22 CYS CYS A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 HIS 32 32 32 HIS HIS A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 TRP 36 36 36 TRP TRP A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 ARG 38 38 38 ARG ARG A . n A 1 39 GLN 39 39 39 GLN GLN A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 GLN 43 43 43 GLN GLN A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 TRP 47 47 47 TRP TRP A . n A 1 48 MET 48 48 48 MET MET A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 PHE 51 51 51 PHE PHE A . n A 1 52 ILE 52 52 52 ILE ILE A . n A 1 53 PRO 53 53 53 PRO PRO A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 PHE 55 55 55 PHE PHE A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 THR 57 57 57 THR THR A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 ILE 59 59 59 ILE ILE A . n A 1 60 TYR 60 60 60 TYR TYR A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 PHE 64 64 64 PHE PHE A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 ARG 67 67 67 ARG ARG A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 MET 69 69 69 MET MET A . n A 1 70 ILE 70 70 70 ILE ILE A . n A 1 71 SER 71 71 71 SER SER A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 ASP 73 73 73 ASP ASP A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 SER 75 75 75 SER SER A . n A 1 76 THR 76 76 76 THR THR A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 ALA 79 79 79 ALA ALA A . n A 1 80 TYR 80 80 80 TYR TYR A . n A 1 81 MET 81 81 81 MET MET A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 TYR 94 94 94 TYR TYR A . n A 1 95 PHE 95 95 95 PHE PHE A . n A 1 96 CYS 96 96 96 CYS CYS A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 PHE 100 100 100 PHE PHE A . n A 1 101 PRO 101 101 101 PRO PRO A . n A 1 102 ASN 102 102 102 ASN ASN A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 ASP 104 104 104 ASP ASP A . n A 1 105 PRO 105 105 105 PRO PRO A . n A 1 106 ASN 106 106 106 ASN ASN A . n A 1 107 SER 107 107 107 SER SER A . n A 1 108 PRO 108 108 108 PRO PRO A . n A 1 109 GLU 109 109 109 GLU GLU A . n A 1 110 ASP 110 110 110 ASP ASP A . n A 1 111 GLY 111 111 111 GLY GLY A . n A 1 112 PHE 112 112 112 PHE PHE A . n A 1 113 ASP 113 113 113 ASP ASP A . n A 1 114 ILE 114 114 114 ILE ILE A . n A 1 115 TRP 115 115 115 TRP TRP A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 GLN 117 117 117 GLN GLN A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 THR 119 119 119 THR THR A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 VAL 121 121 121 VAL VAL A . n A 1 122 THR 122 122 122 THR THR A . n A 1 123 VAL 123 123 123 VAL VAL A . n B 2 1 ASP 1 1 1 ASP ASP B . n B 2 2 ILE 2 2 2 ILE ILE B . n B 2 3 GLN 3 3 3 GLN GLN B . n B 2 4 MET 4 4 4 MET MET B . n B 2 5 THR 5 5 5 THR THR B . n B 2 6 GLN 6 6 6 GLN GLN B . n B 2 7 SER 7 7 7 SER SER B . n B 2 8 PRO 8 8 8 PRO PRO B . n B 2 9 SER 9 9 9 SER SER B . n B 2 10 SER 10 10 10 SER SER B . n B 2 11 LEU 11 11 11 LEU LEU B . n B 2 12 SER 12 12 12 SER SER B . n B 2 13 ALA 13 13 13 ALA ALA B . n B 2 14 SER 14 14 14 SER SER B . n B 2 15 VAL 15 15 15 VAL VAL B . n B 2 16 GLY 16 16 16 GLY GLY B . n B 2 17 ASP 17 17 17 ASP ASP B . n B 2 18 ARG 18 18 18 ARG ARG B . n B 2 19 VAL 19 19 19 VAL VAL B . n B 2 20 THR 20 20 20 THR THR B . n B 2 21 ILE 21 21 21 ILE ILE B . n B 2 22 THR 22 22 22 THR THR B . n B 2 23 CYS 23 23 23 CYS CYS B . n B 2 24 GLN 24 24 24 GLN GLN B . n B 2 25 ALA 25 25 25 ALA ALA B . n B 2 26 SER 26 26 26 SER SER B . n B 2 27 GLN 27 27 27 GLN GLN B . n B 2 28 ASP 28 28 28 ASP ASP B . n B 2 29 ILE 29 29 29 ILE ILE B . n B 2 30 GLY 30 30 30 GLY GLY B . n B 2 31 ASN 31 31 31 ASN ASN B . n B 2 32 TYR 32 32 32 TYR TYR B . n B 2 33 LEU 33 33 33 LEU LEU B . n B 2 34 ASN 34 34 34 ASN ASN B . n B 2 35 TRP 35 35 35 TRP TRP B . n B 2 36 TYR 36 36 36 TYR TYR B . n B 2 37 GLN 37 37 37 GLN GLN B . n B 2 38 GLN 38 38 38 GLN GLN B . n B 2 39 LYS 39 39 39 LYS LYS B . n B 2 40 PRO 40 40 40 PRO PRO B . n B 2 41 GLY 41 41 41 GLY GLY B . n B 2 42 LYS 42 42 42 LYS LYS B . n B 2 43 ALA 43 43 43 ALA ALA B . n B 2 44 PRO 44 44 44 PRO PRO B . n B 2 45 LYS 45 45 45 LYS LYS B . n B 2 46 LEU 46 46 46 LEU LEU B . n B 2 47 LEU 47 47 47 LEU LEU B . n B 2 48 ILE 48 48 48 ILE ILE B . n B 2 49 TYR 49 49 49 TYR TYR B . n B 2 50 ASP 50 50 50 ASP ASP B . n B 2 51 ALA 51 51 51 ALA ALA B . n B 2 52 SER 52 52 52 SER SER B . n B 2 53 HIS 53 53 53 HIS HIS B . n B 2 54 LEU 54 54 54 LEU LEU B . n B 2 55 GLU 55 55 55 GLU GLU B . n B 2 56 THR 56 56 56 THR THR B . n B 2 57 GLY 57 57 57 GLY GLY B . n B 2 58 VAL 58 58 58 VAL VAL B . n B 2 59 PRO 59 59 59 PRO PRO B . n B 2 60 SER 60 60 60 SER SER B . n B 2 61 ARG 61 61 61 ARG ARG B . n B 2 62 PHE 62 62 62 PHE PHE B . n B 2 63 SER 63 63 63 SER SER B . n B 2 64 GLY 64 64 64 GLY GLY B . n B 2 65 SER 65 65 65 SER SER B . n B 2 66 GLY 66 66 66 GLY GLY B . n B 2 67 SER 67 67 67 SER SER B . n B 2 68 GLY 68 68 68 GLY GLY B . n B 2 69 THR 69 69 69 THR THR B . n B 2 70 ASP 70 70 70 ASP ASP B . n B 2 71 PHE 71 71 71 PHE PHE B . n B 2 72 THR 72 72 72 THR THR B . n B 2 73 PHE 73 73 73 PHE PHE B . n B 2 74 THR 74 74 74 THR THR B . n B 2 75 ILE 75 75 75 ILE ILE B . n B 2 76 SER 76 76 76 SER SER B . n B 2 77 SER 77 77 77 SER SER B . n B 2 78 LEU 78 78 78 LEU LEU B . n B 2 79 GLN 79 79 79 GLN GLN B . n B 2 80 PRO 80 80 80 PRO PRO B . n B 2 81 GLU 81 81 81 GLU GLU B . n B 2 82 ASP 82 82 82 ASP ASP B . n B 2 83 ILE 83 83 83 ILE ILE B . n B 2 84 ALA 84 84 84 ALA ALA B . n B 2 85 THR 85 85 85 THR THR B . n B 2 86 TYR 86 86 86 TYR TYR B . n B 2 87 TYR 87 87 87 TYR TYR B . n B 2 88 CYS 88 88 88 CYS CYS B . n B 2 89 GLN 89 89 89 GLN GLN B . n B 2 90 ARG 90 90 90 ARG ARG B . n B 2 91 TYR 91 91 91 TYR TYR B . n B 2 92 ASP 92 92 92 ASP ASP B . n B 2 93 ASP 93 93 93 ASP ASP B . n B 2 94 LEU 94 94 94 LEU LEU B . n B 2 95 PRO 95 95 95 PRO PRO B . n B 2 96 SER 96 96 96 SER SER B . n B 2 97 TYR 97 97 97 TYR TYR B . n B 2 98 THR 98 98 98 THR THR B . n B 2 99 PHE 99 99 99 PHE PHE B . n B 2 100 GLY 100 100 100 GLY GLY B . n B 2 101 GLN 101 101 101 GLN GLN B . n B 2 102 GLY 102 102 102 GLY GLY B . n B 2 103 THR 103 103 103 THR THR B . n B 2 104 LYS 104 104 104 LYS LYS B . n B 2 105 VAL 105 105 105 VAL VAL B . n B 2 106 GLU 106 106 106 GLU GLU B . n B 2 107 ILE 107 107 107 ILE ILE B . n C 3 1 VAL 1 2 2 VAL VAL H . n C 3 2 GLN 2 3 3 GLN GLN H . n C 3 3 LEU 3 4 4 LEU LEU H . n C 3 4 ALA 4 5 5 ALA ALA H . n C 3 5 GLN 5 6 6 GLN GLN H . n C 3 6 SER 6 7 7 SER SER H . n C 3 7 GLY 7 8 8 GLY GLY H . n C 3 8 SER 8 9 9 SER SER H . n C 3 9 GLU 9 10 10 GLU GLU H . n C 3 10 LEU 10 11 11 LEU LEU H . n C 3 11 ARG 11 12 12 ARG ARG H . n C 3 12 LYS 12 13 13 LYS LYS H . n C 3 13 PRO 13 14 14 PRO PRO H . n C 3 14 GLY 14 15 15 GLY GLY H . n C 3 15 ALA 15 16 16 ALA ALA H . n C 3 16 SER 16 17 17 SER SER H . n C 3 17 VAL 17 18 18 VAL VAL H . n C 3 18 LYS 18 19 19 LYS LYS H . n C 3 19 VAL 19 20 20 VAL VAL H . n C 3 20 SER 20 21 21 SER SER H . n C 3 21 CYS 21 22 22 CYS CYS H . n C 3 22 ASP 22 23 23 ASP ASP H . n C 3 23 THR 23 24 24 THR THR H . n C 3 24 SER 24 25 25 SER SER H . n C 3 25 GLY 25 26 26 GLY GLY H . n C 3 26 HIS 26 27 27 HIS HIS H . n C 3 27 SER 27 28 28 SER SER H . n C 3 28 PHE 28 29 29 PHE PHE H . n C 3 29 THR 29 30 30 THR THR H . n C 3 30 SER 30 31 31 SER SER H . n C 3 31 ASN 31 32 32 ASN ASN H . n C 3 32 ALA 32 33 33 ALA ALA H . n C 3 33 ILE 33 34 34 ILE ILE H . n C 3 34 HIS 34 35 35 HIS HIS H . n C 3 35 TRP 35 36 36 TRP TRP H . n C 3 36 VAL 36 37 37 VAL VAL H . n C 3 37 ARG 37 38 38 ARG ARG H . n C 3 38 GLN 38 39 39 GLN GLN H . n C 3 39 ALA 39 40 40 ALA ALA H . n C 3 40 PRO 40 41 41 PRO PRO H . n C 3 41 GLY 41 42 42 GLY GLY H . n C 3 42 GLN 42 43 43 GLN GLN H . n C 3 43 GLY 43 44 44 GLY GLY H . n C 3 44 LEU 44 45 45 LEU LEU H . n C 3 45 GLU 45 46 46 GLU GLU H . n C 3 46 TRP 46 47 47 TRP TRP H . n C 3 47 MET 47 48 48 MET MET H . n C 3 48 GLY 48 49 49 GLY GLY H . n C 3 49 TRP 49 50 50 TRP TRP H . n C 3 50 ILE 50 51 51 ILE ILE H . n C 3 51 ASN 51 52 52 ASN ASN H . n C 3 52 THR 52 53 53 THR THR H . n C 3 53 ASP 53 54 54 ASP ASP H . n C 3 54 THR 54 55 55 THR THR H . n C 3 55 GLY 55 56 56 GLY GLY H . n C 3 56 THR 56 57 57 THR THR H . n C 3 57 PRO 57 58 58 PRO PRO H . n C 3 58 THR 58 59 59 THR THR H . n C 3 59 TYR 59 60 60 TYR TYR H . n C 3 60 ALA 60 61 61 ALA ALA H . n C 3 61 GLN 61 62 62 GLN GLN H . n C 3 62 GLY 62 63 63 GLY GLY H . n C 3 63 PHE 63 64 64 PHE PHE H . n C 3 64 THR 64 65 65 THR THR H . n C 3 65 GLY 65 66 66 GLY GLY H . n C 3 66 ARG 66 67 67 ARG ARG H . n C 3 67 PHE 67 68 68 PHE PHE H . n C 3 68 VAL 68 69 69 VAL VAL H . n C 3 69 PHE 69 70 70 PHE PHE H . n C 3 70 SER 70 71 71 SER SER H . n C 3 71 LEU 71 72 72 LEU LEU H . n C 3 72 ASP 72 73 73 ASP ASP H . n C 3 73 THR 73 74 74 THR THR H . n C 3 74 SER 74 75 75 SER SER H . n C 3 75 ALA 75 76 76 ALA ALA H . n C 3 76 ARG 76 77 77 ARG ARG H . n C 3 77 THR 77 78 78 THR THR H . n C 3 78 ALA 78 79 79 ALA ALA H . n C 3 79 TYR 79 80 80 TYR TYR H . n C 3 80 LEU 80 81 81 LEU LEU H . n C 3 81 GLN 81 82 82 GLN GLN H . n C 3 82 ILE 82 83 83 ILE ILE H . n C 3 83 SER 83 84 84 SER SER H . n C 3 84 SER 84 85 85 SER SER H . n C 3 85 LEU 85 86 86 LEU LEU H . n C 3 86 LYS 86 87 87 LYS LYS H . n C 3 87 ALA 87 88 88 ALA ALA H . n C 3 88 ASP 88 89 89 ASP ASP H . n C 3 89 ASP 89 90 90 ASP ASP H . n C 3 90 THR 90 91 91 THR THR H . n C 3 91 ALA 91 92 92 ALA ALA H . n C 3 92 VAL 92 93 93 VAL VAL H . n C 3 93 PHE 93 94 94 PHE PHE H . n C 3 94 TYR 94 95 95 TYR TYR H . n C 3 95 CYS 95 96 96 CYS CYS H . n C 3 96 ALA 96 97 97 ALA ALA H . n C 3 97 ARG 97 98 98 ARG ARG H . n C 3 98 GLU 98 99 99 GLU GLU H . n C 3 99 ARG 99 100 100 ARG ARG H . n C 3 100 ASP 100 101 101 ASP ASP H . n C 3 101 TYR 101 102 102 TYR TYR H . n C 3 102 SER 102 103 103 SER SER H . n C 3 103 ASP 103 104 104 ASP ASP H . n C 3 104 TYR 104 105 105 TYR TYR H . n C 3 105 PHE 105 106 106 PHE PHE H . n C 3 106 PHE 106 107 107 PHE PHE H . n C 3 107 ASP 107 108 108 ASP ASP H . n C 3 108 TYR 108 109 109 TYR TYR H . n C 3 109 TRP 109 110 110 TRP TRP H . n C 3 110 GLY 110 111 111 GLY GLY H . n C 3 111 GLN 111 112 112 GLN GLN H . n C 3 112 GLY 112 113 113 GLY GLY H . n C 3 113 THR 113 114 114 THR THR H . n C 3 114 LEU 114 115 115 LEU LEU H . n C 3 115 VAL 115 116 116 VAL VAL H . n C 3 116 THR 116 117 117 THR THR H . n C 3 117 VAL 117 118 118 VAL VAL H . n C 3 118 SER 118 119 119 SER SER H . n C 3 119 SER 119 120 120 SER SER H . n D 4 1 GLU 1 1 1 GLU GLU L . n D 4 2 VAL 2 2 2 VAL VAL L . n D 4 3 VAL 3 3 3 VAL VAL L . n D 4 4 MET 4 4 4 MET MET L . n D 4 5 THR 5 5 5 THR THR L . n D 4 6 GLN 6 6 6 GLN GLN L . n D 4 7 SER 7 7 7 SER SER L . n D 4 8 PRO 8 8 8 PRO PRO L . n D 4 9 ALA 9 9 9 ALA ALA L . n D 4 10 SER 10 10 10 SER SER L . n D 4 11 LEU 11 11 11 LEU LEU L . n D 4 12 SER 12 12 12 SER SER L . n D 4 13 VAL 13 13 13 VAL VAL L . n D 4 14 SER 14 14 14 SER SER L . n D 4 15 PRO 15 15 15 PRO PRO L . n D 4 16 GLY 16 16 16 GLY GLY L . n D 4 17 GLU 17 17 17 GLU GLU L . n D 4 18 ARG 18 18 18 ARG ARG L . n D 4 19 ALA 19 19 19 ALA ALA L . n D 4 20 THR 20 20 20 THR THR L . n D 4 21 LEU 21 21 21 LEU LEU L . n D 4 22 SER 22 22 22 SER SER L . n D 4 23 CYS 23 23 23 CYS CYS L . n D 4 24 ARG 24 24 24 ARG ARG L . n D 4 25 ALA 25 25 25 ALA ALA L . n D 4 26 ARG 26 26 26 ARG ARG L . n D 4 27 ALA 27 27 27 ALA ALA L . n D 4 28 SER 28 28 28 SER SER L . n D 4 29 LEU 29 29 29 LEU LEU L . n D 4 30 GLY 30 30 30 GLY GLY L . n D 4 31 ILE 31 31 31 ILE ILE L . n D 4 32 SER 32 32 32 SER SER L . n D 4 33 THR 33 33 33 THR THR L . n D 4 34 ASP 34 34 34 ASP ASP L . n D 4 35 LEU 35 35 35 LEU LEU L . n D 4 36 ALA 36 36 36 ALA ALA L . n D 4 37 TRP 37 37 37 TRP TRP L . n D 4 38 TYR 38 38 38 TYR TYR L . n D 4 39 GLN 39 39 39 GLN GLN L . n D 4 40 GLN 40 40 40 GLN GLN L . n D 4 41 ARG 41 41 41 ARG ARG L . n D 4 42 PRO 42 42 42 PRO PRO L . n D 4 43 GLY 43 43 43 GLY GLY L . n D 4 44 GLN 44 44 44 GLN GLN L . n D 4 45 ALA 45 45 45 ALA ALA L . n D 4 46 PRO 46 46 46 PRO PRO L . n D 4 47 ARG 47 47 47 ARG ARG L . n D 4 48 LEU 48 48 48 LEU LEU L . n D 4 49 LEU 49 49 49 LEU LEU L . n D 4 50 ILE 50 50 50 ILE ILE L . n D 4 51 TYR 51 51 51 TYR TYR L . n D 4 52 GLY 52 52 52 GLY GLY L . n D 4 53 ALA 53 53 53 ALA ALA L . n D 4 54 SER 54 54 54 SER SER L . n D 4 55 THR 55 55 55 THR THR L . n D 4 56 ARG 56 56 56 ARG ARG L . n D 4 57 ALA 57 57 57 ALA ALA L . n D 4 58 THR 58 58 58 THR THR L . n D 4 59 GLY 59 59 59 GLY GLY L . n D 4 60 ILE 60 60 60 ILE ILE L . n D 4 61 PRO 61 61 61 PRO PRO L . n D 4 62 ALA 62 62 62 ALA ALA L . n D 4 63 ARG 63 63 63 ARG ARG L . n D 4 64 PHE 64 64 64 PHE PHE L . n D 4 65 SER 65 65 65 SER SER L . n D 4 66 GLY 66 66 66 GLY GLY L . n D 4 67 SER 67 67 67 SER SER L . n D 4 68 GLY 68 68 68 GLY GLY L . n D 4 69 SER 69 69 69 SER SER L . n D 4 70 GLY 70 70 70 GLY GLY L . n D 4 71 THR 71 71 71 THR THR L . n D 4 72 GLU 72 72 72 GLU GLU L . n D 4 73 PHE 73 73 73 PHE PHE L . n D 4 74 THR 74 74 74 THR THR L . n D 4 75 LEU 75 75 75 LEU LEU L . n D 4 76 THR 76 76 76 THR THR L . n D 4 77 ILE 77 77 77 ILE ILE L . n D 4 78 SER 78 78 78 SER SER L . n D 4 79 SER 79 79 79 SER SER L . n D 4 80 LEU 80 80 80 LEU LEU L . n D 4 81 GLN 81 81 81 GLN GLN L . n D 4 82 SER 82 82 82 SER SER L . n D 4 83 GLU 83 83 83 GLU GLU L . n D 4 84 ASP 84 84 84 ASP ASP L . n D 4 85 SER 85 85 85 SER SER L . n D 4 86 ALA 86 86 86 ALA ALA L . n D 4 87 VAL 87 87 87 VAL VAL L . n D 4 88 TYR 88 88 88 TYR TYR L . n D 4 89 TYR 89 89 89 TYR TYR L . n D 4 90 CYS 90 90 90 CYS CYS L . n D 4 91 GLN 91 91 91 GLN GLN L . n D 4 92 GLN 92 92 92 GLN GLN L . n D 4 93 TYR 93 93 93 TYR TYR L . n D 4 94 SER 94 94 94 SER SER L . n D 4 95 ASN 95 95 95 ASN ASN L . n D 4 96 TRP 96 96 96 TRP TRP L . n D 4 97 PRO 97 97 97 PRO PRO L . n D 4 98 LEU 98 98 98 LEU LEU L . n D 4 99 THR 99 99 99 THR THR L . n D 4 100 PHE 100 100 100 PHE PHE L . n D 4 101 GLY 101 101 101 GLY GLY L . n D 4 102 GLY 102 102 102 GLY GLY L . n D 4 103 GLY 103 103 103 GLY GLY L . n D 4 104 THR 104 104 104 THR THR L . n D 4 105 LYS 105 105 105 LYS LYS L . n D 4 106 VAL 106 106 106 VAL VAL L . n D 4 107 GLU 107 107 107 GLU GLU L . n D 4 108 ILE 108 108 108 ILE ILE L . n D 4 109 LYS 109 109 109 LYS LYS L . n E 5 1 LEU 1 335 335 LEU LEU R . n E 5 2 CYS 2 336 336 CYS CYS R . n E 5 3 PRO 3 337 337 PRO PRO R . n E 5 4 PHE 4 338 338 PHE PHE R . n E 5 5 ASP 5 339 339 ASP ASP R . n E 5 6 GLU 6 340 340 GLU GLU R . n E 5 7 VAL 7 341 341 VAL VAL R . n E 5 8 PHE 8 342 342 PHE PHE R . n E 5 9 ASN 9 343 343 ASN ASN R . n E 5 10 ALA 10 344 344 ALA ALA R . n E 5 11 THR 11 345 345 THR THR R . n E 5 12 ARG 12 346 346 ARG ARG R . n E 5 13 PHE 13 347 347 PHE PHE R . n E 5 14 ALA 14 348 348 ALA ALA R . n E 5 15 SER 15 349 349 SER SER R . n E 5 16 VAL 16 350 350 VAL VAL R . n E 5 17 TYR 17 351 351 TYR TYR R . n E 5 18 ALA 18 352 352 ALA ALA R . n E 5 19 TRP 19 353 353 TRP TRP R . n E 5 20 ASN 20 354 354 ASN ASN R . n E 5 21 ARG 21 355 355 ARG ARG R . n E 5 22 LYS 22 356 356 LYS LYS R . n E 5 23 ARG 23 357 357 ARG ARG R . n E 5 24 ILE 24 358 358 ILE ILE R . n E 5 25 SER 25 359 359 SER SER R . n E 5 26 ASN 26 360 360 ASN ASN R . n E 5 27 CYS 27 361 361 CYS CYS R . n E 5 28 VAL 28 362 362 VAL VAL R . n E 5 29 ALA 29 363 363 ALA ALA R . n E 5 30 ASP 30 364 364 ASP ASP R . n E 5 31 TYR 31 365 365 TYR TYR R . n E 5 32 SER 32 366 366 SER SER R . n E 5 33 VAL 33 367 367 VAL VAL R . n E 5 34 LEU 34 368 368 LEU LEU R . n E 5 35 TYR 35 369 369 TYR TYR R . n E 5 36 ASN 36 370 370 ASN ASN R . n E 5 37 LEU 37 371 371 LEU LEU R . n E 5 38 ALA 38 372 372 ALA ALA R . n E 5 39 PRO 39 373 373 PRO PRO R . n E 5 40 PHE 40 374 374 PHE PHE R . n E 5 41 PHE 41 375 375 PHE PHE R . n E 5 42 THR 42 376 376 THR THR R . n E 5 43 PHE 43 377 377 PHE PHE R . n E 5 44 LYS 44 378 378 LYS LYS R . n E 5 45 CYS 45 379 379 CYS CYS R . n E 5 46 TYR 46 380 380 TYR TYR R . n E 5 47 GLY 47 381 381 GLY GLY R . n E 5 48 VAL 48 382 382 VAL VAL R . n E 5 49 SER 49 383 383 SER SER R . n E 5 50 PRO 50 384 384 PRO PRO R . n E 5 51 THR 51 385 385 THR THR R . n E 5 52 LYS 52 386 386 LYS LYS R . n E 5 53 LEU 53 387 387 LEU LEU R . n E 5 54 ASN 54 388 388 ASN ASN R . n E 5 55 ASP 55 389 389 ASP ASP R . n E 5 56 LEU 56 390 390 LEU LEU R . n E 5 57 CYS 57 391 391 CYS CYS R . n E 5 58 PHE 58 392 392 PHE PHE R . n E 5 59 THR 59 393 393 THR THR R . n E 5 60 ASN 60 394 394 ASN ASN R . n E 5 61 VAL 61 395 395 VAL VAL R . n E 5 62 TYR 62 396 396 TYR TYR R . n E 5 63 ALA 63 397 397 ALA ALA R . n E 5 64 ASP 64 398 398 ASP ASP R . n E 5 65 SER 65 399 399 SER SER R . n E 5 66 PHE 66 400 400 PHE PHE R . n E 5 67 VAL 67 401 401 VAL VAL R . n E 5 68 ILE 68 402 402 ILE ILE R . n E 5 69 ARG 69 403 403 ARG ARG R . n E 5 70 GLY 70 404 404 GLY GLY R . n E 5 71 ASP 71 405 405 ASP ASP R . n E 5 72 GLU 72 406 406 GLU GLU R . n E 5 73 VAL 73 407 407 VAL VAL R . n E 5 74 ARG 74 408 408 ARG ARG R . n E 5 75 GLN 75 409 409 GLN GLN R . n E 5 76 ILE 76 410 410 ILE ILE R . n E 5 77 ALA 77 411 411 ALA ALA R . n E 5 78 PRO 78 412 412 PRO PRO R . n E 5 79 GLY 79 413 413 GLY GLY R . n E 5 80 GLN 80 414 414 GLN GLN R . n E 5 81 THR 81 415 415 THR THR R . n E 5 82 GLY 82 416 416 GLY GLY R . n E 5 83 ASN 83 417 417 ASN ASN R . n E 5 84 ILE 84 418 418 ILE ILE R . n E 5 85 ALA 85 419 419 ALA ALA R . n E 5 86 ASP 86 420 420 ASP ASP R . n E 5 87 TYR 87 421 421 TYR TYR R . n E 5 88 ASN 88 422 422 ASN ASN R . n E 5 89 TYR 89 423 423 TYR TYR R . n E 5 90 LYS 90 424 424 LYS LYS R . n E 5 91 LEU 91 425 425 LEU LEU R . n E 5 92 PRO 92 426 426 PRO PRO R . n E 5 93 ASP 93 427 427 ASP ASP R . n E 5 94 ASP 94 428 428 ASP ASP R . n E 5 95 PHE 95 429 429 PHE PHE R . n E 5 96 THR 96 430 430 THR THR R . n E 5 97 GLY 97 431 431 GLY GLY R . n E 5 98 CYS 98 432 432 CYS CYS R . n E 5 99 VAL 99 433 433 VAL VAL R . n E 5 100 ILE 100 434 434 ILE ILE R . n E 5 101 ALA 101 435 435 ALA ALA R . n E 5 102 TRP 102 436 436 TRP TRP R . n E 5 103 ASN 103 437 437 ASN ASN R . n E 5 104 SER 104 438 438 SER SER R . n E 5 105 ASN 105 439 439 ASN ASN R . n E 5 106 LYS 106 440 440 LYS LYS R . n E 5 107 LEU 107 441 441 LEU LEU R . n E 5 108 ASP 108 442 442 ASP ASP R . n E 5 109 SER 109 443 443 SER SER R . n E 5 110 LYS 110 444 444 LYS LYS R . n E 5 111 VAL 111 445 445 VAL VAL R . n E 5 112 SER 112 446 446 SER SER R . n E 5 113 GLY 113 447 447 GLY GLY R . n E 5 114 ASN 114 448 448 ASN ASN R . n E 5 115 TYR 115 449 449 TYR TYR R . n E 5 116 ASN 116 450 450 ASN ASN R . n E 5 117 TYR 117 451 451 TYR TYR R . n E 5 118 LEU 118 452 452 LEU LEU R . n E 5 119 TYR 119 453 453 TYR TYR R . n E 5 120 ARG 120 454 454 ARG ARG R . n E 5 121 LEU 121 455 455 LEU LEU R . n E 5 122 PHE 122 456 456 PHE PHE R . n E 5 123 ARG 123 457 457 ARG ARG R . n E 5 124 LYS 124 458 458 LYS LYS R . n E 5 125 SER 125 459 459 SER SER R . n E 5 126 ASN 126 460 460 ASN ASN R . n E 5 127 LEU 127 461 461 LEU LEU R . n E 5 128 LYS 128 462 462 LYS LYS R . n E 5 129 PRO 129 463 463 PRO PRO R . n E 5 130 PHE 130 464 464 PHE PHE R . n E 5 131 GLU 131 465 465 GLU GLU R . n E 5 132 ARG 132 466 466 ARG ARG R . n E 5 133 ASP 133 467 467 ASP ASP R . n E 5 134 ILE 134 468 468 ILE ILE R . n E 5 135 SER 135 469 469 SER SER R . n E 5 136 THR 136 470 470 THR THR R . n E 5 137 GLU 137 471 471 GLU GLU R . n E 5 138 ILE 138 472 472 ILE ILE R . n E 5 139 TYR 139 473 473 TYR TYR R . n E 5 140 GLN 140 474 474 GLN GLN R . n E 5 141 ALA 141 475 475 ALA ALA R . n E 5 142 GLY 142 476 476 GLY GLY R . n E 5 143 ASN 143 477 477 ASN ASN R . n E 5 144 LYS 144 478 478 LYS LYS R . n E 5 145 PRO 145 479 479 PRO PRO R . n E 5 146 CYS 146 480 480 CYS CYS R . n E 5 147 ASN 147 481 481 ASN ASN R . n E 5 148 GLY 148 482 482 GLY GLY R . n E 5 149 VAL 149 483 483 VAL VAL R . n E 5 150 ALA 150 484 484 ALA ALA R . n E 5 151 GLY 151 485 485 GLY GLY R . n E 5 152 PHE 152 486 486 PHE PHE R . n E 5 153 ASN 153 487 487 ASN ASN R . n E 5 154 CYS 154 488 488 CYS CYS R . n E 5 155 TYR 155 489 489 TYR TYR R . n E 5 156 PHE 156 490 490 PHE PHE R . n E 5 157 PRO 157 491 491 PRO PRO R . n E 5 158 LEU 158 492 492 LEU LEU R . n E 5 159 ARG 159 493 493 ARG ARG R . n E 5 160 SER 160 494 494 SER SER R . n E 5 161 TYR 161 495 495 TYR TYR R . n E 5 162 SER 162 496 496 SER SER R . n E 5 163 PHE 163 497 497 PHE PHE R . n E 5 164 ARG 164 498 498 ARG ARG R . n E 5 165 PRO 165 499 499 PRO PRO R . n E 5 166 THR 166 500 500 THR THR R . n E 5 167 TYR 167 501 501 TYR TYR R . n E 5 168 GLY 168 502 502 GLY GLY R . n E 5 169 VAL 169 503 503 VAL VAL R . n E 5 170 GLY 170 504 504 GLY GLY R . n E 5 171 HIS 171 505 505 HIS HIS R . n E 5 172 GLN 172 506 506 GLN GLN R . n E 5 173 PRO 173 507 507 PRO PRO R . n E 5 174 TYR 174 508 508 TYR TYR R . n E 5 175 ARG 175 509 509 ARG ARG R . n E 5 176 VAL 176 510 510 VAL VAL R . n E 5 177 VAL 177 511 511 VAL VAL R . n E 5 178 VAL 178 512 512 VAL VAL R . n E 5 179 LEU 179 513 513 LEU LEU R . n E 5 180 SER 180 514 514 SER SER R . n E 5 181 PHE 181 515 515 PHE PHE R . n E 5 182 GLU 182 516 516 GLU GLU R . n E 5 183 LEU 183 517 517 LEU LEU R . n E 5 184 LEU 184 518 518 LEU LEU R . n E 5 185 HIS 185 519 519 HIS HIS R . n E 5 186 ALA 186 520 520 ALA ALA R . n E 5 187 PRO 187 521 521 PRO PRO R . n E 5 188 ALA 188 522 522 ALA ALA R . n E 5 189 THR 189 523 523 THR THR R . n E 5 190 VAL 190 524 524 VAL VAL R . n E 5 191 CYS 191 525 525 CYS CYS R . n E 5 192 GLY 192 526 526 GLY GLY R . n E 5 193 LYS 193 527 527 LYS LYS R . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email 1801110460@pku.edu.cn _pdbx_contact_author.name_first Zhiying _pdbx_contact_author.name_last Zhang _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-5690-9796 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-09-28 2 'Structure model' 1 1 2023-04-12 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' # _pdbx_entry_details.entry_id 7Y0W _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # _em_3d_fitting.entry_id 7Y0W _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol ? _em_3d_fitting.ref_space ? _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 7Y0W _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 3985 _em_3d_reconstruction.resolution 3.42 _em_3d_reconstruction.resolution_method 'FSC 1/2 BIT CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 8.0 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name 'Local structure of BD55-5514 and BD55-5840 Fab and Omicron BA.1 RBD complex' _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.entity_id_list '1, 2, 3, 4, 5' _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_imaging.id 1 _em_imaging.entry_id 7Y0W _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen ? _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'SPOT SCAN' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode OTHER _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max 2000 _em_imaging.nominal_defocus_min 1000 _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature ? _em_vitrification.cryogen_name OTHER _em_vitrification.details ? _em_vitrification.humidity ? _em_vitrification.instrument ? _em_vitrification.entry_id 7Y0W _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 7Y0W _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB H ASP 23 ? ? CG H ASP 23 ? ? OD2 H ASP 23 ? ? 123.99 118.30 5.69 0.90 N 2 1 CB H ASP 54 ? ? CG H ASP 54 ? ? OD2 H ASP 54 ? ? 124.18 118.30 5.88 0.90 N 3 1 CA R CYS 379 ? ? CB R CYS 379 ? ? SG R CYS 379 ? ? 129.59 114.20 15.39 1.10 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 90 ? ? -90.91 52.31 2 1 ASN A 102 ? ? -140.08 31.10 3 1 SER A 107 ? ? 51.29 76.75 4 1 ALA B 51 ? ? 66.22 -5.36 5 1 SER B 67 ? ? -123.72 -50.18 6 1 THR B 69 ? ? -131.31 -32.57 7 1 THR H 55 ? ? -140.63 -5.34 8 1 SER L 32 ? ? 59.06 70.22 9 1 TYR L 93 ? ? -99.09 55.20 10 1 ASN R 370 ? ? -95.78 33.07 11 1 ASP R 428 ? ? -97.71 33.62 12 1 ARG R 457 ? ? -142.86 14.67 13 1 LYS R 458 ? ? 67.30 -4.52 14 1 SER R 459 ? ? -161.99 -167.17 15 1 ASN R 477 ? ? -91.53 51.52 16 1 PRO R 479 ? ? -90.70 56.34 17 1 CYS R 480 ? ? -105.00 42.22 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 LEU A 99 ? ? PHE A 100 ? ? -141.97 2 1 CYS R 361 ? ? VAL R 362 ? ? 146.38 3 1 CYS R 379 ? ? TYR R 380 ? ? -146.54 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 R LYS 527 ? CG ? E LYS 193 CG 2 1 Y 1 R LYS 527 ? CD ? E LYS 193 CD 3 1 Y 1 R LYS 527 ? CE ? E LYS 193 CE 4 1 Y 1 R LYS 527 ? NZ ? E LYS 193 NZ 5 1 N 1 X NAG 1 ? O1 ? F NAG 1 O1 # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type NONE _em_ctf_correction.details ? # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 1.5 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K2 QUANTUM (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? _em_image_recording.avg_electron_dose_per_subtomogram ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'CRYSTALLOGRAPHY MERGING' ? ? ? 1 1 1 2 'IMAGE ACQUISITION' ? ? ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? ? ? 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? ? ? ? ? ? 8 'MODEL REFINEMENT' ? ? ? ? ? ? 9 OTHER ? ? ? ? ? ? 10 'INITIAL EULER ASSIGNMENT' ? ? ? 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? ? ? 1 ? ? 12 CLASSIFICATION ? ? ? 1 ? ? 13 RECONSTRUCTION ? ? ? 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero F 6 NAG 1 X NAG 1 X NAG 1 n F 6 NAG 2 X NAG 2 X NAG 2 n F 6 FUC 3 X FUC 3 X FUC 3 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 6 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 6 'DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-ROH' 'Glycam Condensed Sequence' GMML 1.0 2 6 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-1-2/a4-b1_a6-c1' WURCS PDB2Glycan 1.1.0 3 6 '[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}[(6+1)][a-L-Fucp]{}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 6 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 6 3 FUC C1 O1 1 NAG O6 HO6 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 6 NAG 1 n 6 NAG 2 n 6 FUC 3 n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 FUC ? ? FUC ? ? 'SUBJECT OF INVESTIGATION' ? 2 NAG ? ? NAG ? ? 'SUBJECT OF INVESTIGATION' ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #