HEADER LIPID TRANSPORT 06-JUN-22 7Y11 TITLE CRYSTAL STRUCTURE OF ATSFH5-SEC14 IN COMPLEX WITH EGG PA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN COMPND 3 SFH5; COMPND 4 CHAIN: A, B; COMPND 5 SYNONYM: PROTEIN SEC FOURTEEN HOMOLOGS 5,ATSFH5,ATSFH5-SEC14; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: SFH5, AT1G75370, F1B16.10; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SEC14P HOMOLOG PROTEIN (SFH), ARABIDOPSIS THALIANA, CHLOROPLAST, KEYWDS 2 PHOSPHATIDIC ACID (PA), LIPID TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR Y.Q.LU,X.Q.WANG,Z.P.LUO,J.W.WU REVDAT 2 29-NOV-23 7Y11 1 REMARK REVDAT 1 19-APR-23 7Y11 0 JRNL AUTH H.Y.YAO,Y.Q.LU,X.L.YANG,X.Q.WANG,Z.LUO,D.L.LIN,J.W.WU, JRNL AUTH 2 H.W.XUE JRNL TITL ARABIDOPSIS SEC14 PROTEINS (SFH5 AND SFH7) MEDIATE JRNL TITL 2 INTERORGANELLE TRANSPORT OF PHOSPHATIDIC ACID AND REGULATE JRNL TITL 3 CHLOROPLAST DEVELOPMENT. JRNL REF PROC.NATL.ACAD.SCI.USA V. 120 37120 2023 JRNL REFN ESSN 1091-6490 JRNL PMID 36716376 JRNL DOI 10.1073/PNAS.2221637120 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.05 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 44903 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2379 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3250 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.33 REMARK 3 BIN R VALUE (WORKING SET) : 0.3370 REMARK 3 BIN FREE R VALUE SET COUNT : 158 REMARK 3 BIN FREE R VALUE : 0.3800 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4590 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 98 REMARK 3 SOLVENT ATOMS : 445 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : -0.55000 REMARK 3 B33 (A**2) : 0.56000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.181 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.158 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.131 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.779 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4800 ; 0.010 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 4659 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6438 ; 1.529 ; 1.649 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10759 ; 1.344 ; 1.586 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 563 ; 6.219 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 258 ;29.830 ;22.209 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 862 ;12.068 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 31 ; 9.962 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 609 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5245 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1087 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2258 ; 2.706 ; 3.236 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2257 ; 2.704 ; 3.235 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2819 ; 3.822 ; 4.843 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7Y11 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1300029940. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-MAR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 R 200K-A REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47341 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 13.10 REMARK 200 R MERGE (I) : 0.17100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 11.60 REMARK 200 R MERGE FOR SHELL (I) : 2.02100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.450 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1AUA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS PROPONE, PH 6.5, 20% REMARK 280 PEG3350 AND 0.2 M NANO3, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.38000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 56.38000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 49.98800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 57.12600 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 49.98800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 57.12600 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 56.38000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 49.98800 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 57.12600 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 56.38000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 49.98800 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 57.12600 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 75 REMARK 465 SER A 76 REMARK 465 LEU A 366 REMARK 465 GLU A 367 REMARK 465 HIS A 368 REMARK 465 HIS A 369 REMARK 465 HIS A 370 REMARK 465 HIS A 371 REMARK 465 HIS A 372 REMARK 465 HIS A 373 REMARK 465 MET B 75 REMARK 465 SER B 76 REMARK 465 GLY B 353 REMARK 465 GLY B 354 REMARK 465 PRO B 355 REMARK 465 LEU B 356 REMARK 465 CYS B 357 REMARK 465 ARG B 358 REMARK 465 HIS B 359 REMARK 465 ASN B 360 REMARK 465 SER B 361 REMARK 465 ALA B 362 REMARK 465 LEU B 363 REMARK 465 ASN B 364 REMARK 465 SER B 365 REMARK 465 LEU B 366 REMARK 465 GLU B 367 REMARK 465 HIS B 368 REMARK 465 HIS B 369 REMARK 465 HIS B 370 REMARK 465 HIS B 371 REMARK 465 HIS B 372 REMARK 465 HIS B 373 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 364 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 181 79.83 -101.12 REMARK 500 ASP A 227 26.84 -146.43 REMARK 500 ILE B 213 -60.17 -121.85 REMARK 500 ASP B 227 25.93 -149.35 REMARK 500 LYS B 303 67.11 -104.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 403 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 81 OD1 REMARK 620 2 ASP A 81 OD2 51.8 REMARK 620 3 HIS A 83 NE2 78.2 107.8 REMARK 620 4 HIS A 112 NE2 77.8 96.4 122.5 REMARK 620 5 CYS A 357 SG 164.2 112.6 107.9 109.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 402 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 168 NE2 REMARK 620 2 CYS A 325 SG 103.3 REMARK 620 3 CYS A 327 SG 103.7 106.3 REMARK 620 4 CYS A 333 SG 105.6 120.0 116.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 403 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 81 OD2 REMARK 620 2 HIS B 83 NE2 106.3 REMARK 620 3 HIS B 112 NE2 90.4 110.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 402 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 168 NE2 REMARK 620 2 CYS B 325 SG 100.5 REMARK 620 3 CYS B 327 SG 104.9 106.0 REMARK 620 4 CYS B 333 SG 107.5 116.3 119.4 REMARK 620 N 1 2 3 DBREF 7Y11 A 76 365 UNP Q8GXC6 SFH5_ARATH 76 365 DBREF 7Y11 B 76 365 UNP Q8GXC6 SFH5_ARATH 76 365 SEQADV 7Y11 MET A 75 UNP Q8GXC6 INITIATING METHIONINE SEQADV 7Y11 LEU A 366 UNP Q8GXC6 EXPRESSION TAG SEQADV 7Y11 GLU A 367 UNP Q8GXC6 EXPRESSION TAG SEQADV 7Y11 HIS A 368 UNP Q8GXC6 EXPRESSION TAG SEQADV 7Y11 HIS A 369 UNP Q8GXC6 EXPRESSION TAG SEQADV 7Y11 HIS A 370 UNP Q8GXC6 EXPRESSION TAG SEQADV 7Y11 HIS A 371 UNP Q8GXC6 EXPRESSION TAG SEQADV 7Y11 HIS A 372 UNP Q8GXC6 EXPRESSION TAG SEQADV 7Y11 HIS A 373 UNP Q8GXC6 EXPRESSION TAG SEQADV 7Y11 MET B 75 UNP Q8GXC6 INITIATING METHIONINE SEQADV 7Y11 LEU B 366 UNP Q8GXC6 EXPRESSION TAG SEQADV 7Y11 GLU B 367 UNP Q8GXC6 EXPRESSION TAG SEQADV 7Y11 HIS B 368 UNP Q8GXC6 EXPRESSION TAG SEQADV 7Y11 HIS B 369 UNP Q8GXC6 EXPRESSION TAG SEQADV 7Y11 HIS B 370 UNP Q8GXC6 EXPRESSION TAG SEQADV 7Y11 HIS B 371 UNP Q8GXC6 EXPRESSION TAG SEQADV 7Y11 HIS B 372 UNP Q8GXC6 EXPRESSION TAG SEQADV 7Y11 HIS B 373 UNP Q8GXC6 EXPRESSION TAG SEQRES 1 A 299 MET SER LEU THR ILE GLU ASP ILE HIS ASP VAL GLU GLU SEQRES 2 A 299 LEU ARG ALA VAL ASP GLU PHE ARG ASN LEU LEU VAL SER SEQRES 3 A 299 GLU ASN LEU LEU PRO PRO THR LEU ASP ASP TYR HIS ILE SEQRES 4 A 299 MET LEU ARG PHE LEU LYS ALA ARG LYS PHE ASP ILE GLY SEQRES 5 A 299 LYS THR LYS LEU MET TRP SER ASN MET ILE LYS TRP ARG SEQRES 6 A 299 LYS ASP PHE GLY THR ASP THR ILE PHE GLU ASP PHE GLU SEQRES 7 A 299 PHE GLU GLU PHE ASP GLU VAL LEU LYS TYR TYR PRO HIS SEQRES 8 A 299 GLY TYR HIS GLY VAL ASP LYS GLU GLY ARG PRO VAL TYR SEQRES 9 A 299 ILE GLU ARG LEU GLY LEU VAL ASP PRO ALA LYS LEU MET SEQRES 10 A 299 GLN VAL THR THR VAL GLU ARG PHE ILE ARG TYR HIS VAL SEQRES 11 A 299 ARG GLU PHE GLU LYS THR VAL ASN ILE LYS LEU PRO ALA SEQRES 12 A 299 CYS CYS ILE ALA ALA LYS ARG HIS ILE ASP SER SER THR SEQRES 13 A 299 THR ILE LEU ASP VAL GLN GLY VAL GLY PHE LYS ASN PHE SEQRES 14 A 299 SER LYS PRO ALA ARG ASP LEU ILE ILE GLN LEU GLN LYS SEQRES 15 A 299 ILE ASP ASN ASP ASN TYR PRO GLU THR LEU HIS ARG MET SEQRES 16 A 299 PHE ILE ILE ASN GLY GLY SER GLY PHE LYS LEU VAL TRP SEQRES 17 A 299 ALA THR VAL LYS GLN PHE LEU ASP PRO LYS THR VAL THR SEQRES 18 A 299 LYS ILE HIS VAL ILE GLY ASN LYS TYR GLN ASN LYS LEU SEQRES 19 A 299 LEU GLU ILE ILE ASP ALA SER GLN LEU PRO ASP PHE LEU SEQRES 20 A 299 GLY GLY THR CYS THR CYS ALA ASP ARG GLY GLY CYS MET SEQRES 21 A 299 ARG SER ASP LYS GLY PRO TRP ASN ASP PRO GLU ILE LEU SEQRES 22 A 299 LYS MET LEU GLN SER GLY GLY PRO LEU CYS ARG HIS ASN SEQRES 23 A 299 SER ALA LEU ASN SER LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 299 MET SER LEU THR ILE GLU ASP ILE HIS ASP VAL GLU GLU SEQRES 2 B 299 LEU ARG ALA VAL ASP GLU PHE ARG ASN LEU LEU VAL SER SEQRES 3 B 299 GLU ASN LEU LEU PRO PRO THR LEU ASP ASP TYR HIS ILE SEQRES 4 B 299 MET LEU ARG PHE LEU LYS ALA ARG LYS PHE ASP ILE GLY SEQRES 5 B 299 LYS THR LYS LEU MET TRP SER ASN MET ILE LYS TRP ARG SEQRES 6 B 299 LYS ASP PHE GLY THR ASP THR ILE PHE GLU ASP PHE GLU SEQRES 7 B 299 PHE GLU GLU PHE ASP GLU VAL LEU LYS TYR TYR PRO HIS SEQRES 8 B 299 GLY TYR HIS GLY VAL ASP LYS GLU GLY ARG PRO VAL TYR SEQRES 9 B 299 ILE GLU ARG LEU GLY LEU VAL ASP PRO ALA LYS LEU MET SEQRES 10 B 299 GLN VAL THR THR VAL GLU ARG PHE ILE ARG TYR HIS VAL SEQRES 11 B 299 ARG GLU PHE GLU LYS THR VAL ASN ILE LYS LEU PRO ALA SEQRES 12 B 299 CYS CYS ILE ALA ALA LYS ARG HIS ILE ASP SER SER THR SEQRES 13 B 299 THR ILE LEU ASP VAL GLN GLY VAL GLY PHE LYS ASN PHE SEQRES 14 B 299 SER LYS PRO ALA ARG ASP LEU ILE ILE GLN LEU GLN LYS SEQRES 15 B 299 ILE ASP ASN ASP ASN TYR PRO GLU THR LEU HIS ARG MET SEQRES 16 B 299 PHE ILE ILE ASN GLY GLY SER GLY PHE LYS LEU VAL TRP SEQRES 17 B 299 ALA THR VAL LYS GLN PHE LEU ASP PRO LYS THR VAL THR SEQRES 18 B 299 LYS ILE HIS VAL ILE GLY ASN LYS TYR GLN ASN LYS LEU SEQRES 19 B 299 LEU GLU ILE ILE ASP ALA SER GLN LEU PRO ASP PHE LEU SEQRES 20 B 299 GLY GLY THR CYS THR CYS ALA ASP ARG GLY GLY CYS MET SEQRES 21 B 299 ARG SER ASP LYS GLY PRO TRP ASN ASP PRO GLU ILE LEU SEQRES 22 B 299 LYS MET LEU GLN SER GLY GLY PRO LEU CYS ARG HIS ASN SEQRES 23 B 299 SER ALA LEU ASN SER LEU GLU HIS HIS HIS HIS HIS HIS HET D21 A 401 46 HET NI A 402 1 HET NI A 403 1 HET CL A 404 1 HET D21 B 401 46 HET NI B 402 1 HET NI B 403 1 HET CL B 404 1 HETNAM D21 (2R)-1-(HEXADECANOYLOXY)-3-(PHOSPHONOOXY)PROPAN-2-YL HETNAM 2 D21 (9Z)-OCTADEC-9-ENOATE HETNAM NI NICKEL (II) ION HETNAM CL CHLORIDE ION FORMUL 3 D21 2(C37 H71 O8 P) FORMUL 4 NI 4(NI 2+) FORMUL 6 CL 2(CL 1-) FORMUL 11 HOH *445(H2 O) HELIX 1 AA1 ASP A 84 GLU A 101 1 18 HELIX 2 AA2 PRO A 105 ASP A 109 5 5 HELIX 3 AA3 ASP A 110 ARG A 121 1 12 HELIX 4 AA4 ASP A 124 GLY A 143 1 20 HELIX 5 AA5 THR A 146 PHE A 151 1 6 HELIX 6 AA6 GLU A 155 TYR A 163 1 9 HELIX 7 AA7 GLY A 183 VAL A 185 5 3 HELIX 8 AA8 ASP A 186 THR A 194 1 9 HELIX 9 AA9 THR A 195 ILE A 213 1 19 HELIX 10 AB1 ILE A 213 LYS A 223 1 11 HELIX 11 AB2 GLY A 239 PHE A 243 5 5 HELIX 12 AB3 SER A 244 TYR A 262 1 19 HELIX 13 AB4 GLY A 275 GLY A 277 5 3 HELIX 14 AB5 PHE A 278 GLN A 287 1 10 HELIX 15 AB6 ASP A 290 LYS A 296 1 7 HELIX 16 AB7 TYR A 304 ILE A 312 1 9 HELIX 17 AB8 PRO A 318 GLY A 322 5 5 HELIX 18 AB9 CYS A 327 GLY A 331 5 5 HELIX 19 AC1 GLY A 332 ASP A 337 1 6 HELIX 20 AC2 GLY A 339 ASN A 342 5 4 HELIX 21 AC3 ASP A 343 GLY A 353 1 11 HELIX 22 AC4 CYS A 357 SER A 365 1 9 HELIX 23 AC5 ASP B 84 GLU B 101 1 18 HELIX 24 AC6 PRO B 105 ASP B 109 5 5 HELIX 25 AC7 ASP B 110 ARG B 121 1 12 HELIX 26 AC8 ASP B 124 GLY B 143 1 20 HELIX 27 AC9 THR B 146 PHE B 151 1 6 HELIX 28 AD1 GLU B 155 TYR B 163 1 9 HELIX 29 AD2 GLY B 183 VAL B 185 5 3 HELIX 30 AD3 ASP B 186 THR B 194 1 9 HELIX 31 AD4 THR B 195 ILE B 213 1 19 HELIX 32 AD5 ILE B 213 LYS B 223 1 11 HELIX 33 AD6 GLY B 239 PHE B 243 5 5 HELIX 34 AD7 SER B 244 TYR B 262 1 19 HELIX 35 AD8 GLY B 275 GLY B 277 5 3 HELIX 36 AD9 PHE B 278 GLN B 287 1 10 HELIX 37 AE1 ASP B 290 LYS B 296 1 7 HELIX 38 AE2 TYR B 304 ILE B 312 1 9 HELIX 39 AE3 PRO B 318 GLY B 322 5 5 HELIX 40 AE4 GLY B 339 ASN B 342 5 4 HELIX 41 AE5 ASP B 343 SER B 352 1 10 SHEET 1 AA1 5 HIS A 165 VAL A 170 0 SHEET 2 AA1 5 PRO A 176 ARG A 181 -1 O ILE A 179 N GLY A 166 SHEET 3 AA1 5 SER A 229 ASP A 234 1 O ASP A 234 N GLU A 180 SHEET 4 AA1 5 LEU A 266 ILE A 272 1 O PHE A 270 N LEU A 233 SHEET 5 AA1 5 ILE A 297 VAL A 299 1 O HIS A 298 N ILE A 271 SHEET 1 AA2 5 HIS B 165 VAL B 170 0 SHEET 2 AA2 5 PRO B 176 ARG B 181 -1 O ILE B 179 N GLY B 166 SHEET 3 AA2 5 SER B 229 ASP B 234 1 O ILE B 232 N TYR B 178 SHEET 4 AA2 5 LEU B 266 ILE B 272 1 O HIS B 267 N SER B 229 SHEET 5 AA2 5 ILE B 297 GLY B 301 1 O HIS B 298 N ILE B 271 LINK OD1 ASP A 81 NI NI A 403 1555 1555 2.80 LINK OD2 ASP A 81 NI NI A 403 1555 1555 1.97 LINK NE2 HIS A 83 NI NI A 403 1555 1555 2.01 LINK NE2 HIS A 112 NI NI A 403 1555 1555 2.11 LINK NE2 HIS A 168 NI NI A 402 1555 1555 2.06 LINK SG CYS A 325 NI NI A 402 1555 1555 2.33 LINK SG CYS A 327 NI NI A 402 1555 1555 2.31 LINK SG CYS A 333 NI NI A 402 1555 1555 2.28 LINK SG CYS A 357 NI NI A 403 1555 1555 2.35 LINK OD2 ASP B 81 NI NI B 403 1555 1555 1.98 LINK NE2 HIS B 83 NI NI B 403 1555 1555 2.12 LINK NE2 HIS B 112 NI NI B 403 1555 1555 2.10 LINK NE2 HIS B 168 NI NI B 402 1555 1555 2.03 LINK SG CYS B 325 NI NI B 402 1555 1555 2.34 LINK SG CYS B 327 NI NI B 402 1555 1555 2.32 LINK SG CYS B 333 NI NI B 402 1555 1555 2.29 CRYST1 99.976 114.252 112.760 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010002 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008753 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008868 0.00000