HEADER SIGNALING PROTEIN 08-JUN-22 7Y1P TITLE CRYSTAL STRUCTURE OF THE RGS-HOMOLOGOUS DOMAIN OF AXIN IN COMPLEX WITH TITLE 2 LZ-22NA COMPND MOL_ID: 1; COMPND 2 MOLECULE: AXIN-1; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: RGS-HOMOLOGOUS DOMAIN; COMPND 5 SYNONYM: AXIS INHIBITION PROTEIN 1,HAXIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AXIN1, AXIN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SIGNALING PROTEIN, WINT/BETA-CATENIN SIGNALING PATHWAY EXPDTA X-RAY DIFFRACTION AUTHOR Z.HE,Z.YUCHI REVDAT 1 13-DEC-23 7Y1P 0 JRNL AUTH Z.HE,Z.YUCHI JRNL TITL CRYSTAL STRUCTURE OF THE RGS-HOMOLOGOUS DOMAIN OF AXIN IN JRNL TITL 2 COMPLEX WITH LZ-22NA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3247 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.84 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 39030 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 1996 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.8360 - 6.2624 0.97 2643 142 0.1671 0.1709 REMARK 3 2 6.2624 - 4.9740 1.00 2668 142 0.2064 0.1922 REMARK 3 3 4.9740 - 4.3462 1.00 2655 144 0.1711 0.1868 REMARK 3 4 4.3462 - 3.9492 1.00 2656 142 0.1861 0.2207 REMARK 3 5 3.9492 - 3.6664 1.00 2645 142 0.1960 0.2026 REMARK 3 6 3.6664 - 3.4504 1.00 2648 142 0.2123 0.2427 REMARK 3 7 3.4504 - 3.2777 1.00 2675 141 0.2310 0.2732 REMARK 3 8 3.2777 - 3.1350 1.00 2601 142 0.2362 0.2754 REMARK 3 9 3.1350 - 3.0144 1.00 2671 146 0.2588 0.3077 REMARK 3 10 3.0144 - 2.9104 1.00 2614 141 0.2614 0.2837 REMARK 3 11 2.9104 - 2.8194 1.00 2638 142 0.2529 0.3126 REMARK 3 12 2.8194 - 2.7389 1.00 2639 144 0.2558 0.2621 REMARK 3 13 2.7389 - 2.6668 1.00 2614 140 0.2568 0.2879 REMARK 3 14 2.6668 - 2.6020 1.00 2667 146 0.2778 0.2908 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.890 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 114 THROUGH 139 OR REMARK 3 (RESID 140 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 141 REMARK 3 THROUGH 143 OR (RESID 144 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 145 THROUGH 162 OR (RESID 163 REMARK 3 THROUGH 165 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 166 OR (RESID 167 THROUGH 169 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 170 OR (RESID 171 THROUGH 174 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 175 OR (RESID REMARK 3 176 AND (NAME N OR NAME CA OR NAME C OR REMARK 3 NAME O OR NAME CB )) OR RESID 177 THROUGH REMARK 3 197 OR (RESID 198 AND (NAME N OR NAME CA REMARK 3 OR NAME C OR NAME O OR NAME CB )) OR REMARK 3 RESID 199 THROUGH 205 OR (RESID 206 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 207 THROUGH 212 OR REMARK 3 (RESID 213 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 214 REMARK 3 THROUGH 241 OR (RESID 242 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 243 THROUGH 252)) REMARK 3 SELECTION : (CHAIN B AND (RESID 114 THROUGH 139 OR REMARK 3 (RESID 140 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 141 REMARK 3 THROUGH 143 OR (RESID 144 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 145 THROUGH 162 OR (RESID 163 REMARK 3 THROUGH 165 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 166 OR (RESID 167 THROUGH 169 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 170 OR (RESID 171 THROUGH 174 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 175 THROUGH 197 REMARK 3 OR (RESID 198 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 199 THROUGH 205 OR (RESID 206 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 207 THROUGH 212 OR (RESID 213 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 214 THROUGH 241 REMARK 3 OR (RESID 242 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 243 THROUGH 252)) REMARK 3 ATOM PAIRS NUMBER : 1676 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 114 THROUGH 139 OR REMARK 3 (RESID 140 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 141 REMARK 3 THROUGH 143 OR (RESID 144 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 145 THROUGH 162 OR (RESID 163 REMARK 3 THROUGH 165 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 166 OR (RESID 167 THROUGH 169 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 170 OR (RESID 171 THROUGH 174 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 175 OR (RESID REMARK 3 176 AND (NAME N OR NAME CA OR NAME C OR REMARK 3 NAME O OR NAME CB )) OR RESID 177 THROUGH REMARK 3 197 OR (RESID 198 AND (NAME N OR NAME CA REMARK 3 OR NAME C OR NAME O OR NAME CB )) OR REMARK 3 RESID 199 THROUGH 205 OR (RESID 206 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 207 THROUGH 212 OR REMARK 3 (RESID 213 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 214 REMARK 3 THROUGH 241 OR (RESID 242 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 243 THROUGH 252)) REMARK 3 SELECTION : (CHAIN C AND (RESID 114 THROUGH 139 OR REMARK 3 (RESID 140 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 141 REMARK 3 THROUGH 171 OR (RESID 172 THROUGH 174 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 175 THROUGH 205 OR REMARK 3 (RESID 206 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 207 REMARK 3 THROUGH 252)) REMARK 3 ATOM PAIRS NUMBER : 1676 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 114 THROUGH 139 OR REMARK 3 (RESID 140 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 141 REMARK 3 THROUGH 143 OR (RESID 144 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 145 THROUGH 162 OR (RESID 163 REMARK 3 THROUGH 165 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 166 OR (RESID 167 THROUGH 169 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 170 OR (RESID 171 THROUGH 174 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 175 OR (RESID REMARK 3 176 AND (NAME N OR NAME CA OR NAME C OR REMARK 3 NAME O OR NAME CB )) OR RESID 177 THROUGH REMARK 3 197 OR (RESID 198 AND (NAME N OR NAME CA REMARK 3 OR NAME C OR NAME O OR NAME CB )) OR REMARK 3 RESID 199 THROUGH 205 OR (RESID 206 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 207 THROUGH 212 OR REMARK 3 (RESID 213 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 214 REMARK 3 THROUGH 241 OR (RESID 242 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 243 THROUGH 252)) REMARK 3 SELECTION : (CHAIN D AND (RESID 114 THROUGH 143 OR REMARK 3 (RESID 144 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 145 REMARK 3 THROUGH 163 OR (RESID 164 THROUGH 165 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 166 OR (RESID 167 REMARK 3 THROUGH 169 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 170 OR (RESID 171 THROUGH 174 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 175 THROUGH 197 OR (RESID 198 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 199 THROUGH 212 REMARK 3 OR (RESID 213 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 214 THROUGH 241 OR (RESID 242 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 243 THROUGH 252)) REMARK 3 ATOM PAIRS NUMBER : 1676 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7Y1P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1300030093. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-NOV-21 REMARK 200 TEMPERATURE (KELVIN) : 193.15 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39114 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.89500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1DK8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.4 M SODIUM MALONATE PH 7.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 77.67150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 77.67150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 53.53050 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 77.67150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 77.67150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 53.53050 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 77.67150 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 77.67150 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 53.53050 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 77.67150 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 77.67150 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 53.53050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 74 REMARK 465 SER A 75 REMARK 465 ALA A 76 REMARK 465 GLU A 216 REMARK 465 SER A 217 REMARK 465 PRO A 218 REMARK 465 LYS A 219 REMARK 465 VAL A 220 REMARK 465 GLY B 74 REMARK 465 SER B 75 REMARK 465 ALA B 76 REMARK 465 GLU B 216 REMARK 465 SER B 217 REMARK 465 PRO B 218 REMARK 465 LYS B 219 REMARK 465 VAL B 220 REMARK 465 GLY C 74 REMARK 465 SER C 75 REMARK 465 ALA C 76 REMARK 465 GLU C 216 REMARK 465 SER C 217 REMARK 465 PRO C 218 REMARK 465 LYS C 219 REMARK 465 VAL C 220 REMARK 465 GLY D 74 REMARK 465 SER D 75 REMARK 465 ALA D 76 REMARK 465 GLU D 216 REMARK 465 SER D 217 REMARK 465 PRO D 218 REMARK 465 LYS D 219 REMARK 465 VAL D 220 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 79 OG1 CG2 REMARK 470 GLN A 96 CG CD OE1 NE2 REMARK 470 GLU A 128 CG CD OE1 OE2 REMARK 470 GLU A 195 CG CD OE1 OE2 REMARK 470 SER A 215 OG REMARK 470 THR B 79 OG1 CG2 REMARK 470 GLN B 96 CG CD OE1 NE2 REMARK 470 GLU B 128 CG CD OE1 OE2 REMARK 470 LYS B 139 CG CD CE NZ REMARK 470 GLU B 195 CG CD OE1 OE2 REMARK 470 SER B 215 OG REMARK 470 THR C 79 OG1 CG2 REMARK 470 GLN C 96 CG CD OE1 NE2 REMARK 470 LYS C 107 CG CD CE NZ REMARK 470 LYS C 126 CG CD CE NZ REMARK 470 LEU C 127 CG CD1 CD2 REMARK 470 GLU C 128 CG CD OE1 OE2 REMARK 470 CYS C 130 SG REMARK 470 ASP C 131 CG OD1 OD2 REMARK 470 SER C 132 OG REMARK 470 GLU C 134 CG CD OE1 OE2 REMARK 470 LYS C 136 CG CD CE NZ REMARK 470 LYS C 139 CG CD CE NZ REMARK 470 LYS C 161 CG CD CE NZ REMARK 470 LEU C 176 CG CD1 CD2 REMARK 470 GLU C 195 CG CD OE1 OE2 REMARK 470 ASP C 205 CG OD1 OD2 REMARK 470 SER C 215 OG REMARK 470 THR D 79 OG1 CG2 REMARK 470 GLN D 96 CG CD OE1 NE2 REMARK 470 ARG D 103 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 126 CG CD CE NZ REMARK 470 GLU D 128 CG CD OE1 OE2 REMARK 470 GLU D 135 CG CD OE1 OE2 REMARK 470 LYS D 136 CG CD CE NZ REMARK 470 ARG D 137 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 139 CG CD CE NZ REMARK 470 LYS D 169 CG CD CE NZ REMARK 470 GLU D 195 CG CD OE1 OE2 REMARK 470 GLU D 209 CG CD OE1 OE2 REMARK 470 SER D 215 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR B 148 O19 I5L B 301 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 111 CB CYS A 111 SG -0.112 REMARK 500 CYS B 111 CB CYS B 111 SG -0.104 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 87 CA - CB - CG ANGL. DEV. = 25.6 DEGREES REMARK 500 HIS D 90 N - CA - CB ANGL. DEV. = -12.2 DEGREES REMARK 500 ASN D 133 CB - CA - C ANGL. DEV. = -17.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 177 62.12 -102.09 REMARK 500 ASN A 196 -63.87 -140.48 REMARK 500 ASN B 196 -65.08 -139.88 REMARK 500 LYS C 126 -76.76 -73.73 REMARK 500 LEU C 127 124.88 -17.94 REMARK 500 PRO C 129 49.31 -66.42 REMARK 500 CYS C 130 -127.23 -66.69 REMARK 500 ASP C 131 -20.53 -162.66 REMARK 500 GLU C 134 -33.28 -149.62 REMARK 500 ASN C 196 -59.72 -142.47 REMARK 500 THR C 213 61.74 -111.80 REMARK 500 ASN D 196 -64.34 -141.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN D 133 GLU D 134 -142.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 HIS D 90 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 7Y1P A 74 220 UNP O15169 AXIN1_HUMAN 74 220 DBREF 7Y1P B 74 220 UNP O15169 AXIN1_HUMAN 74 220 DBREF 7Y1P C 74 220 UNP O15169 AXIN1_HUMAN 74 220 DBREF 7Y1P D 74 220 UNP O15169 AXIN1_HUMAN 74 220 SEQRES 1 A 147 GLY SER ALA SER PRO THR PRO PRO TYR LEU LYS TRP ALA SEQRES 2 A 147 GLU SER LEU HIS SER LEU LEU ASP ASP GLN ASP GLY ILE SEQRES 3 A 147 SER LEU PHE ARG THR PHE LEU LYS GLN GLU GLY CYS ALA SEQRES 4 A 147 ASP LEU LEU ASP PHE TRP PHE ALA CYS THR GLY PHE ARG SEQRES 5 A 147 LYS LEU GLU PRO CYS ASP SER ASN GLU GLU LYS ARG LEU SEQRES 6 A 147 LYS LEU ALA ARG ALA ILE TYR ARG LYS TYR ILE LEU ASP SEQRES 7 A 147 ASN ASN GLY ILE VAL SER ARG GLN THR LYS PRO ALA THR SEQRES 8 A 147 LYS SER PHE ILE LYS GLY CYS ILE MET LYS GLN LEU ILE SEQRES 9 A 147 ASP PRO ALA MET PHE ASP GLN ALA GLN THR GLU ILE GLN SEQRES 10 A 147 ALA THR MET GLU GLU ASN THR TYR PRO SER PHE LEU LYS SEQRES 11 A 147 SER ASP ILE TYR LEU GLU TYR THR ARG THR GLY SER GLU SEQRES 12 A 147 SER PRO LYS VAL SEQRES 1 B 147 GLY SER ALA SER PRO THR PRO PRO TYR LEU LYS TRP ALA SEQRES 2 B 147 GLU SER LEU HIS SER LEU LEU ASP ASP GLN ASP GLY ILE SEQRES 3 B 147 SER LEU PHE ARG THR PHE LEU LYS GLN GLU GLY CYS ALA SEQRES 4 B 147 ASP LEU LEU ASP PHE TRP PHE ALA CYS THR GLY PHE ARG SEQRES 5 B 147 LYS LEU GLU PRO CYS ASP SER ASN GLU GLU LYS ARG LEU SEQRES 6 B 147 LYS LEU ALA ARG ALA ILE TYR ARG LYS TYR ILE LEU ASP SEQRES 7 B 147 ASN ASN GLY ILE VAL SER ARG GLN THR LYS PRO ALA THR SEQRES 8 B 147 LYS SER PHE ILE LYS GLY CYS ILE MET LYS GLN LEU ILE SEQRES 9 B 147 ASP PRO ALA MET PHE ASP GLN ALA GLN THR GLU ILE GLN SEQRES 10 B 147 ALA THR MET GLU GLU ASN THR TYR PRO SER PHE LEU LYS SEQRES 11 B 147 SER ASP ILE TYR LEU GLU TYR THR ARG THR GLY SER GLU SEQRES 12 B 147 SER PRO LYS VAL SEQRES 1 C 147 GLY SER ALA SER PRO THR PRO PRO TYR LEU LYS TRP ALA SEQRES 2 C 147 GLU SER LEU HIS SER LEU LEU ASP ASP GLN ASP GLY ILE SEQRES 3 C 147 SER LEU PHE ARG THR PHE LEU LYS GLN GLU GLY CYS ALA SEQRES 4 C 147 ASP LEU LEU ASP PHE TRP PHE ALA CYS THR GLY PHE ARG SEQRES 5 C 147 LYS LEU GLU PRO CYS ASP SER ASN GLU GLU LYS ARG LEU SEQRES 6 C 147 LYS LEU ALA ARG ALA ILE TYR ARG LYS TYR ILE LEU ASP SEQRES 7 C 147 ASN ASN GLY ILE VAL SER ARG GLN THR LYS PRO ALA THR SEQRES 8 C 147 LYS SER PHE ILE LYS GLY CYS ILE MET LYS GLN LEU ILE SEQRES 9 C 147 ASP PRO ALA MET PHE ASP GLN ALA GLN THR GLU ILE GLN SEQRES 10 C 147 ALA THR MET GLU GLU ASN THR TYR PRO SER PHE LEU LYS SEQRES 11 C 147 SER ASP ILE TYR LEU GLU TYR THR ARG THR GLY SER GLU SEQRES 12 C 147 SER PRO LYS VAL SEQRES 1 D 147 GLY SER ALA SER PRO THR PRO PRO TYR LEU LYS TRP ALA SEQRES 2 D 147 GLU SER LEU HIS SER LEU LEU ASP ASP GLN ASP GLY ILE SEQRES 3 D 147 SER LEU PHE ARG THR PHE LEU LYS GLN GLU GLY CYS ALA SEQRES 4 D 147 ASP LEU LEU ASP PHE TRP PHE ALA CYS THR GLY PHE ARG SEQRES 5 D 147 LYS LEU GLU PRO CYS ASP SER ASN GLU GLU LYS ARG LEU SEQRES 6 D 147 LYS LEU ALA ARG ALA ILE TYR ARG LYS TYR ILE LEU ASP SEQRES 7 D 147 ASN ASN GLY ILE VAL SER ARG GLN THR LYS PRO ALA THR SEQRES 8 D 147 LYS SER PHE ILE LYS GLY CYS ILE MET LYS GLN LEU ILE SEQRES 9 D 147 ASP PRO ALA MET PHE ASP GLN ALA GLN THR GLU ILE GLN SEQRES 10 D 147 ALA THR MET GLU GLU ASN THR TYR PRO SER PHE LEU LYS SEQRES 11 D 147 SER ASP ILE TYR LEU GLU TYR THR ARG THR GLY SER GLU SEQRES 12 D 147 SER PRO LYS VAL HET I5L B 301 21 HETNAM I5L (2~{Z},4~{Z})-2-METHYL-5-(8-OXIDANYLDIBENZOFURAN-4-YL) HETNAM 2 I5L PENTA-2,4-DIENAL FORMUL 5 I5L C18 H14 O3 HELIX 1 AA1 PRO A 80 SER A 88 1 9 HELIX 2 AA2 SER A 88 LEU A 93 1 6 HELIX 3 AA3 ASP A 95 GLY A 110 1 16 HELIX 4 AA4 CYS A 111 LYS A 126 1 16 HELIX 5 AA5 CYS A 130 SER A 132 5 3 HELIX 6 AA6 ASN A 133 ILE A 149 1 17 HELIX 7 AA7 GLY A 154 THR A 160 1 7 HELIX 8 AA8 LYS A 161 GLN A 175 1 15 HELIX 9 AA9 PHE A 182 ASN A 196 1 15 HELIX 10 AB1 ASN A 196 LYS A 203 1 8 HELIX 11 AB2 SER A 204 GLY A 214 1 11 HELIX 12 AB3 PRO B 80 SER B 88 1 9 HELIX 13 AB4 SER B 88 ASP B 94 1 7 HELIX 14 AB5 ASP B 95 GLY B 110 1 16 HELIX 15 AB6 CYS B 111 LYS B 126 1 16 HELIX 16 AB7 CYS B 130 SER B 132 5 3 HELIX 17 AB8 ASN B 133 ILE B 149 1 17 HELIX 18 AB9 GLY B 154 THR B 160 1 7 HELIX 19 AC1 LYS B 161 LYS B 174 1 14 HELIX 20 AC2 PHE B 182 ASN B 196 1 15 HELIX 21 AC3 ASN B 196 LYS B 203 1 8 HELIX 22 AC4 SER B 204 THR B 213 1 10 HELIX 23 AC5 PRO C 80 SER C 88 1 9 HELIX 24 AC6 SER C 88 ASP C 94 1 7 HELIX 25 AC7 ASP C 95 GLY C 110 1 16 HELIX 26 AC8 CYS C 111 LEU C 127 1 17 HELIX 27 AC9 GLU C 134 ILE C 149 1 16 HELIX 28 AD1 GLY C 154 THR C 160 1 7 HELIX 29 AD2 LYS C 161 LYS C 174 1 14 HELIX 30 AD3 PHE C 182 ASN C 196 1 15 HELIX 31 AD4 ASN C 196 LYS C 203 1 8 HELIX 32 AD5 SER C 204 THR C 213 1 10 HELIX 33 AD6 PRO D 80 SER D 88 1 9 HELIX 34 AD7 SER D 88 LEU D 93 1 6 HELIX 35 AD8 ASP D 95 GLY D 110 1 16 HELIX 36 AD9 CYS D 111 LEU D 127 1 17 HELIX 37 AE1 ASN D 133 ILE D 149 1 17 HELIX 38 AE2 GLY D 154 THR D 160 1 7 HELIX 39 AE3 LYS D 161 LYS D 174 1 14 HELIX 40 AE4 PHE D 182 ASN D 196 1 15 HELIX 41 AE5 ASN D 196 LYS D 203 1 8 HELIX 42 AE6 SER D 204 THR D 213 1 10 CRYST1 155.343 155.343 107.061 90.00 90.00 90.00 I 4 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006437 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006437 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009340 0.00000