data_7Y3K # _entry.id 7Y3K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7Y3K pdb_00007y3k 10.2210/pdb7y3k/pdb WWPDB D_1300030193 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7Y3K _pdbx_database_status.recvd_initial_deposition_date 2022-06-11 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ru, W.' 1 0000-0002-2050-1983 'Xu, C.' 2 0000-0003-0444-7080 # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_patent _citation.unpublished_flag ? ? ? ? ? ? ? US ? ? primary J.Biol.Chem. JBCHA3 0071 1083-351X ? ? 298 ? 102607 102607 ;Structural studies of SALL family protein zinc finger cluster domains in complex with DNA reveal preferential binding to an AATA tetranucleotide motif. ; 2022 ? 10.1016/j.jbc.2022.102607 36257403 ? ? ? ? ? ? ? ? ? US ? ? 1 J.Biol.Chem. JBCHA3 0071 1083-351X ? ? ? ? ? ? ;Structural studies of SALL family protein zinc finger cluster domains in complex with DNA reveal preferential binding to an AATA tetranucleotide motif ; 2022 ? doi.org/10.1016/j.jbc.2022.102607 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ru, W.' 1 ? primary 'Koga, T.' 2 ? primary 'Wang, X.' 3 ? primary 'Guo, Q.' 4 ? primary 'Gearhart, M.D.' 5 ? primary 'Zhao, S.' 6 ? primary 'Murphy, M.' 7 ? primary 'Kawakami, H.' 8 ? primary 'Corcoran, D.' 9 ? primary 'Zhang, J.' 10 ? primary 'Zhu, Z.' 11 ? primary 'Yao, X.' 12 ? primary 'Kawakami, Y.' 13 ? primary 'Xu, C.' 14 ? 1 'Ru, W.' 15 0000-0002-2050-1983 1 'Koga, T.' 16 ? 1 'Wang, X.' 17 ? 1 'Guo, Q.' 18 ? 1 'Gearhart, M.D.' 19 ? 1 'Zhao, S.' 20 ? 1 'Murphy, M.' 21 ? 1 'Kawakami, H.' 22 ? 1 'Corcoran, D.' 23 ? 1 'Zhang, J.' 24 ? 1 'Zhu, Z.' 25 ? 1 'Yao, X.' 26 ? 1 'Kawakami, Y.' 27 ? 1 'Xu, C.' 28 0000-0003-0444-7080 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7Y3K _cell.details ? _cell.formula_units_Z ? _cell.length_a 43.364 _cell.length_a_esd ? _cell.length_b 49.868 _cell.length_b_esd ? _cell.length_c 105.406 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 7Y3K _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Sal-like protein 4' 8708.993 2 ? ? ? ? 2 polymer syn 'DNA (16-mer)' 4896.215 1 ? ? ? ? 3 polymer syn 'DNA (16-mer)' 4896.215 1 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 4 ? ? ? ? 5 water nat water 18.015 16 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Zinc finger protein 797,Zinc finger protein SALL4' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no GHMMTPLLAAQPRRQAKQHGCTRCGKNFSSASALQIHERTHTGEKPFVCNICGRAFTTKGNLKVHYMTHGANNNSARRG GHMMTPLLAAQPRRQAKQHGCTRCGKNFSSASALQIHERTHTGEKPFVCNICGRAFTTKGNLKVHYMTHGANNNSARRG A,B ? 2 polydeoxyribonucleotide no no '(DG)(DG)(DA)(DA)(DA)(DT)(DA)(DT)(DT)(DA)(DT)(DA)(DT)(DT)(DC)(DC)' GGAAATATTATATTCC G ? 3 polydeoxyribonucleotide no no '(DG)(DG)(DA)(DA)(DT)(DA)(DT)(DA)(DA)(DT)(DA)(DT)(DT)(DT)(DC)(DC)' GGAATATAATATTTCC H ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 MET n 1 4 MET n 1 5 THR n 1 6 PRO n 1 7 LEU n 1 8 LEU n 1 9 ALA n 1 10 ALA n 1 11 GLN n 1 12 PRO n 1 13 ARG n 1 14 ARG n 1 15 GLN n 1 16 ALA n 1 17 LYS n 1 18 GLN n 1 19 HIS n 1 20 GLY n 1 21 CYS n 1 22 THR n 1 23 ARG n 1 24 CYS n 1 25 GLY n 1 26 LYS n 1 27 ASN n 1 28 PHE n 1 29 SER n 1 30 SER n 1 31 ALA n 1 32 SER n 1 33 ALA n 1 34 LEU n 1 35 GLN n 1 36 ILE n 1 37 HIS n 1 38 GLU n 1 39 ARG n 1 40 THR n 1 41 HIS n 1 42 THR n 1 43 GLY n 1 44 GLU n 1 45 LYS n 1 46 PRO n 1 47 PHE n 1 48 VAL n 1 49 CYS n 1 50 ASN n 1 51 ILE n 1 52 CYS n 1 53 GLY n 1 54 ARG n 1 55 ALA n 1 56 PHE n 1 57 THR n 1 58 THR n 1 59 LYS n 1 60 GLY n 1 61 ASN n 1 62 LEU n 1 63 LYS n 1 64 VAL n 1 65 HIS n 1 66 TYR n 1 67 MET n 1 68 THR n 1 69 HIS n 1 70 GLY n 1 71 ALA n 1 72 ASN n 1 73 ASN n 1 74 ASN n 1 75 SER n 1 76 ALA n 1 77 ARG n 1 78 ARG n 1 79 GLY n 2 1 DG n 2 2 DG n 2 3 DA n 2 4 DA n 2 5 DA n 2 6 DT n 2 7 DA n 2 8 DT n 2 9 DT n 2 10 DA n 2 11 DT n 2 12 DA n 2 13 DT n 2 14 DT n 2 15 DC n 2 16 DC n 3 1 DG n 3 2 DG n 3 3 DA n 3 4 DA n 3 5 DT n 3 6 DA n 3 7 DT n 3 8 DA n 3 9 DA n 3 10 DT n 3 11 DA n 3 12 DT n 3 13 DT n 3 14 DT n 3 15 DC n 3 16 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 79 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'SALL4, ZNF797' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 16 'synthetic construct' ? 32630 ? 3 1 sample 1 16 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP SALL4_HUMAN Q9UJQ4 ? 1 MTPLLAAQPRRQAKQHGCTRCGKNFSSASALQIHERTHTGEKPFVCNICGRAFTTKGNLKVHYMTHGANNNSARRG 855 2 PDB 7Y3K 7Y3K ? 2 ? 1 3 PDB 7Y3K 7Y3K ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7Y3K A 4 ? 79 ? Q9UJQ4 855 ? 930 ? 855 930 2 2 7Y3K G 1 ? 16 ? 7Y3K 1 ? 16 ? 1 16 3 3 7Y3K H 1 ? 16 ? 7Y3K 1 ? 16 ? 1 16 4 1 7Y3K B 4 ? 79 ? Q9UJQ4 855 ? 930 ? 855 930 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7Y3K GLY A 1 ? UNP Q9UJQ4 ? ? 'expression tag' 852 1 1 7Y3K HIS A 2 ? UNP Q9UJQ4 ? ? 'expression tag' 853 2 1 7Y3K MET A 3 ? UNP Q9UJQ4 ? ? 'expression tag' 854 3 4 7Y3K GLY B 1 ? UNP Q9UJQ4 ? ? 'expression tag' 852 4 4 7Y3K HIS B 2 ? UNP Q9UJQ4 ? ? 'expression tag' 853 5 4 7Y3K MET B 3 ? UNP Q9UJQ4 ? ? 'expression tag' 854 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7Y3K _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.09 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 41.27 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M BIS-TRIS, pH 5.5, 0.2 M Sodium chloride, 25% polyethylene glycol 3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-07-20 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL18U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL18U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7Y3K _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.50 _reflns.d_resolution_low 40.00 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 8329 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 10.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 19.0 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.969 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? _reflns.pdbx_CC_split_method ? # _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.54 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 8329 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.900 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 125.010 _refine.B_iso_mean 59.5261 _refine.B_iso_min 26.260 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7Y3K _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.5010 _refine.ls_d_res_low 28.7220 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 8329 _refine.ls_number_reflns_R_free 831 _refine.ls_number_reflns_R_work 7498 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.5900 _refine.ls_percent_reflns_R_free 9.9800 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2103 _refine.ls_R_factor_R_free 0.2504 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2059 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.360 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 7Y3I _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 28.9900 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3400 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.5010 _refine_hist.d_res_low 28.7220 _refine_hist.number_atoms_solvent 16 _refine_hist.number_atoms_total 1494 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 140 _refine_hist.pdbx_B_iso_mean_ligand 55.21 _refine_hist.pdbx_B_iso_mean_solvent 41.39 _refine_hist.pdbx_number_atoms_protein 818 _refine_hist.pdbx_number_atoms_nucleic_acid 656 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.5010 2.6573 . . 134 1203 98.0000 . . . 0.3127 0.0000 0.2854 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6573 2.8623 . . 137 1229 100.0000 . . . 0.3747 0.0000 0.2993 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8623 3.1500 . . 136 1226 100.0000 . . . 0.3732 0.0000 0.2891 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.1500 3.6050 . . 137 1249 100.0000 . . . 0.2204 0.0000 0.2076 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.6050 4.5391 . . 140 1255 100.0000 . . . 0.2457 0.0000 0.1837 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.5391 28.7220 . . 147 1336 100.0000 . . . 0.1921 0.0000 0.1611 . . . . . . . . . . . # _struct.entry_id 7Y3K _struct.title 'Structure of SALL4 ZFC4 bound with 16 bp AT-rich dsDNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7Y3K _struct_keywords.text 'SALL4, zinc finger, AT-rich DNA, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA complex' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 1 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 5 ? J N N 5 ? K N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 30 ? GLY A 43 ? SER A 881 GLY A 894 1 ? 14 HELX_P HELX_P2 AA2 THR A 58 ? MET A 67 ? THR A 909 MET A 918 1 ? 10 HELX_P HELX_P3 AA3 THR A 68 ? GLY A 70 ? THR A 919 GLY A 921 5 ? 3 HELX_P HELX_P4 AA4 SER D 30 ? THR D 42 ? SER B 881 THR B 893 1 ? 13 HELX_P HELX_P5 AA5 THR D 58 ? TYR D 66 ? THR B 909 TYR B 917 1 ? 9 HELX_P HELX_P6 AA6 MET D 67 ? HIS D 69 ? MET B 918 HIS B 920 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 21 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 872 A ZN 1000 1_555 ? ? ? ? ? ? ? 2.349 ? ? metalc2 metalc ? ? A CYS 24 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 875 A ZN 1000 1_555 ? ? ? ? ? ? ? 2.273 ? ? metalc3 metalc ? ? A HIS 37 NE2 ? ? ? 1_555 E ZN . ZN ? ? A HIS 888 A ZN 1000 1_555 ? ? ? ? ? ? ? 2.061 ? ? metalc4 metalc ? ? A HIS 41 NE2 ? ? ? 1_555 E ZN . ZN ? ? A HIS 892 A ZN 1000 1_555 ? ? ? ? ? ? ? 2.100 ? ? metalc5 metalc ? ? A CYS 49 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 900 A ZN 1001 1_555 ? ? ? ? ? ? ? 2.184 ? ? metalc6 metalc ? ? A CYS 52 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 903 A ZN 1001 1_555 ? ? ? ? ? ? ? 2.343 ? ? metalc7 metalc ? ? A HIS 65 NE2 ? ? ? 1_555 F ZN . ZN ? ? A HIS 916 A ZN 1001 1_555 ? ? ? ? ? ? ? 2.009 ? ? metalc8 metalc ? ? A HIS 69 NE2 ? ? ? 1_555 F ZN . ZN ? ? A HIS 920 A ZN 1001 1_555 ? ? ? ? ? ? ? 2.086 ? ? metalc9 metalc ? ? D CYS 21 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 872 B ZN 1000 1_555 ? ? ? ? ? ? ? 2.354 ? ? metalc10 metalc ? ? D CYS 24 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 875 B ZN 1000 1_555 ? ? ? ? ? ? ? 2.462 ? ? metalc11 metalc ? ? D HIS 37 NE2 ? ? ? 1_555 G ZN . ZN ? ? B HIS 888 B ZN 1000 1_555 ? ? ? ? ? ? ? 2.502 ? ? metalc12 metalc ? ? D HIS 41 NE2 ? ? ? 1_555 G ZN . ZN ? ? B HIS 892 B ZN 1000 1_555 ? ? ? ? ? ? ? 1.954 ? ? metalc13 metalc ? ? D CYS 49 SG ? ? ? 1_555 H ZN . ZN ? ? B CYS 900 B ZN 1001 1_555 ? ? ? ? ? ? ? 2.372 ? ? metalc14 metalc ? ? D CYS 52 SG ? ? ? 1_555 H ZN . ZN ? ? B CYS 903 B ZN 1001 1_555 ? ? ? ? ? ? ? 2.296 ? ? metalc15 metalc ? ? D HIS 65 NE2 ? ? ? 1_555 H ZN . ZN ? ? B HIS 916 B ZN 1001 1_555 ? ? ? ? ? ? ? 2.123 ? ? metalc16 metalc ? ? D HIS 69 NE2 ? ? ? 1_555 H ZN . ZN ? ? B HIS 920 B ZN 1001 1_555 ? ? ? ? ? ? ? 2.096 ? ? hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 C DC 16 N3 ? ? G DG 1 H DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 C DC 16 O2 ? ? G DG 1 H DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 C DC 16 N4 ? ? G DG 1 H DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 15 N3 ? ? G DG 2 H DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DC 15 O2 ? ? G DG 2 H DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 2 O6 ? ? ? 1_555 C DC 15 N4 ? ? G DG 2 H DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DA 3 N1 ? ? ? 1_555 C DT 14 N3 ? ? G DA 3 H DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DA 3 N6 ? ? ? 1_555 C DT 14 O4 ? ? G DA 3 H DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DA 4 N1 ? ? ? 1_555 C DT 13 N3 ? ? G DA 4 H DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DA 4 N6 ? ? ? 1_555 C DT 13 O4 ? ? G DA 4 H DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DA 5 N1 ? ? ? 1_555 C DT 12 N3 ? ? G DA 5 H DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DA 5 N6 ? ? ? 1_555 C DT 12 O4 ? ? G DA 5 H DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DT 6 N3 ? ? ? 1_555 C DA 11 N1 ? ? G DT 6 H DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DT 6 O4 ? ? ? 1_555 C DA 11 N6 ? ? G DT 6 H DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DA 7 N1 ? ? ? 1_555 C DT 10 N3 ? ? G DA 7 H DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DA 7 N6 ? ? ? 1_555 C DT 10 O4 ? ? G DA 7 H DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DT 8 N3 ? ? ? 1_555 C DA 9 N1 ? ? G DT 8 H DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DT 8 O4 ? ? ? 1_555 C DA 9 N6 ? ? G DT 8 H DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DT 9 N3 ? ? ? 1_555 C DA 8 N1 ? ? G DT 9 H DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DT 9 O4 ? ? ? 1_555 C DA 8 N6 ? ? G DT 9 H DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DA 10 N1 ? ? ? 1_555 C DT 7 N3 ? ? G DA 10 H DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DA 10 N6 ? ? ? 1_555 C DT 7 O4 ? ? G DA 10 H DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DT 11 N3 ? ? ? 1_555 C DA 6 N1 ? ? G DT 11 H DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DT 11 O4 ? ? ? 1_555 C DA 6 N6 ? ? G DT 11 H DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DA 12 N1 ? ? ? 1_555 C DT 5 N3 ? ? G DA 12 H DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DA 12 N6 ? ? ? 1_555 C DT 5 O4 ? ? G DA 12 H DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DT 13 N3 ? ? ? 1_555 C DA 4 N1 ? ? G DT 13 H DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DT 13 O4 ? ? ? 1_555 C DA 4 N6 ? ? G DT 13 H DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DT 14 N3 ? ? ? 1_555 C DA 3 N1 ? ? G DT 14 H DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DT 14 O4 ? ? ? 1_555 C DA 3 N6 ? ? G DT 14 H DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DC 15 N3 ? ? ? 1_555 C DG 2 N1 ? ? G DC 15 H DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DC 15 N4 ? ? ? 1_555 C DG 2 O6 ? ? G DC 15 H DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DC 15 O2 ? ? ? 1_555 C DG 2 N2 ? ? G DC 15 H DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DC 16 N3 ? ? ? 1_555 C DG 1 N1 ? ? G DC 16 H DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DC 16 N4 ? ? ? 1_555 C DG 1 O6 ? ? G DC 16 H DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B DC 16 O2 ? ? ? 1_555 C DG 1 N2 ? ? G DC 16 H DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 HIS A 19 ? GLY A 20 ? HIS A 870 GLY A 871 AA1 2 ASN A 27 ? PHE A 28 ? ASN A 878 PHE A 879 AA2 1 PHE A 47 ? VAL A 48 ? PHE A 898 VAL A 899 AA2 2 ALA A 55 ? PHE A 56 ? ALA A 906 PHE A 907 AA3 1 PHE D 47 ? VAL D 48 ? PHE B 898 VAL B 899 AA3 2 ALA D 55 ? PHE D 56 ? ALA B 906 PHE B 907 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N HIS A 19 ? N HIS A 870 O PHE A 28 ? O PHE A 879 AA2 1 2 N PHE A 47 ? N PHE A 898 O PHE A 56 ? O PHE A 907 AA3 1 2 N PHE D 47 ? N PHE B 898 O PHE D 56 ? O PHE B 907 # _atom_sites.entry_id 7Y3K _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.023061 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020053 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009487 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 852 ? ? ? A . n A 1 2 HIS 2 853 ? ? ? A . n A 1 3 MET 3 854 ? ? ? A . n A 1 4 MET 4 855 ? ? ? A . n A 1 5 THR 5 856 ? ? ? A . n A 1 6 PRO 6 857 ? ? ? A . n A 1 7 LEU 7 858 ? ? ? A . n A 1 8 LEU 8 859 ? ? ? A . n A 1 9 ALA 9 860 ? ? ? A . n A 1 10 ALA 10 861 ? ? ? A . n A 1 11 GLN 11 862 ? ? ? A . n A 1 12 PRO 12 863 ? ? ? A . n A 1 13 ARG 13 864 ? ? ? A . n A 1 14 ARG 14 865 ? ? ? A . n A 1 15 GLN 15 866 ? ? ? A . n A 1 16 ALA 16 867 ? ? ? A . n A 1 17 LYS 17 868 868 LYS LYS A . n A 1 18 GLN 18 869 869 GLN GLN A . n A 1 19 HIS 19 870 870 HIS HIS A . n A 1 20 GLY 20 871 871 GLY GLY A . n A 1 21 CYS 21 872 872 CYS CYS A . n A 1 22 THR 22 873 873 THR THR A . n A 1 23 ARG 23 874 874 ARG ARG A . n A 1 24 CYS 24 875 875 CYS CYS A . n A 1 25 GLY 25 876 876 GLY GLY A . n A 1 26 LYS 26 877 877 LYS LYS A . n A 1 27 ASN 27 878 878 ASN ASN A . n A 1 28 PHE 28 879 879 PHE PHE A . n A 1 29 SER 29 880 880 SER SER A . n A 1 30 SER 30 881 881 SER SER A . n A 1 31 ALA 31 882 882 ALA ALA A . n A 1 32 SER 32 883 883 SER SER A . n A 1 33 ALA 33 884 884 ALA ALA A . n A 1 34 LEU 34 885 885 LEU LEU A . n A 1 35 GLN 35 886 886 GLN GLN A . n A 1 36 ILE 36 887 887 ILE ILE A . n A 1 37 HIS 37 888 888 HIS HIS A . n A 1 38 GLU 38 889 889 GLU GLU A . n A 1 39 ARG 39 890 890 ARG ARG A . n A 1 40 THR 40 891 891 THR THR A . n A 1 41 HIS 41 892 892 HIS HIS A . n A 1 42 THR 42 893 893 THR THR A . n A 1 43 GLY 43 894 894 GLY GLY A . n A 1 44 GLU 44 895 895 GLU GLU A . n A 1 45 LYS 45 896 896 LYS LYS A . n A 1 46 PRO 46 897 897 PRO PRO A . n A 1 47 PHE 47 898 898 PHE PHE A . n A 1 48 VAL 48 899 899 VAL VAL A . n A 1 49 CYS 49 900 900 CYS CYS A . n A 1 50 ASN 50 901 901 ASN ASN A . n A 1 51 ILE 51 902 902 ILE ILE A . n A 1 52 CYS 52 903 903 CYS CYS A . n A 1 53 GLY 53 904 904 GLY GLY A . n A 1 54 ARG 54 905 905 ARG ARG A . n A 1 55 ALA 55 906 906 ALA ALA A . n A 1 56 PHE 56 907 907 PHE PHE A . n A 1 57 THR 57 908 908 THR THR A . n A 1 58 THR 58 909 909 THR THR A . n A 1 59 LYS 59 910 910 LYS LYS A . n A 1 60 GLY 60 911 911 GLY GLY A . n A 1 61 ASN 61 912 912 ASN ASN A . n A 1 62 LEU 62 913 913 LEU LEU A . n A 1 63 LYS 63 914 914 LYS LYS A . n A 1 64 VAL 64 915 915 VAL VAL A . n A 1 65 HIS 65 916 916 HIS HIS A . n A 1 66 TYR 66 917 917 TYR TYR A . n A 1 67 MET 67 918 918 MET MET A . n A 1 68 THR 68 919 919 THR THR A . n A 1 69 HIS 69 920 920 HIS HIS A . n A 1 70 GLY 70 921 921 GLY GLY A . n A 1 71 ALA 71 922 ? ? ? A . n A 1 72 ASN 72 923 ? ? ? A . n A 1 73 ASN 73 924 ? ? ? A . n A 1 74 ASN 74 925 ? ? ? A . n A 1 75 SER 75 926 ? ? ? A . n A 1 76 ALA 76 927 ? ? ? A . n A 1 77 ARG 77 928 ? ? ? A . n A 1 78 ARG 78 929 ? ? ? A . n A 1 79 GLY 79 930 ? ? ? A . n B 2 1 DG 1 1 1 DG DG G . n B 2 2 DG 2 2 2 DG DG G . n B 2 3 DA 3 3 3 DA DA G . n B 2 4 DA 4 4 4 DA DA G . n B 2 5 DA 5 5 5 DA DA G . n B 2 6 DT 6 6 6 DT DT G . n B 2 7 DA 7 7 7 DA DA G . n B 2 8 DT 8 8 8 DT DT G . n B 2 9 DT 9 9 9 DT DT G . n B 2 10 DA 10 10 10 DA DA G . n B 2 11 DT 11 11 11 DT DT G . n B 2 12 DA 12 12 12 DA DA G . n B 2 13 DT 13 13 13 DT DT G . n B 2 14 DT 14 14 14 DT DT G . n B 2 15 DC 15 15 15 DC DC G . n B 2 16 DC 16 16 16 DC DC G . n C 3 1 DG 1 1 1 DG DG H . n C 3 2 DG 2 2 2 DG DG H . n C 3 3 DA 3 3 3 DA DA H . n C 3 4 DA 4 4 4 DA DA H . n C 3 5 DT 5 5 5 DT DT H . n C 3 6 DA 6 6 6 DA DA H . n C 3 7 DT 7 7 7 DT DT H . n C 3 8 DA 8 8 8 DA DA H . n C 3 9 DA 9 9 9 DA DA H . n C 3 10 DT 10 10 10 DT DT H . n C 3 11 DA 11 11 11 DA DA H . n C 3 12 DT 12 12 12 DT DT H . n C 3 13 DT 13 13 13 DT DT H . n C 3 14 DT 14 14 14 DT DT H . n C 3 15 DC 15 15 15 DC DC H . n C 3 16 DC 16 16 16 DC DC H . n D 1 1 GLY 1 852 ? ? ? B . n D 1 2 HIS 2 853 ? ? ? B . n D 1 3 MET 3 854 ? ? ? B . n D 1 4 MET 4 855 ? ? ? B . n D 1 5 THR 5 856 ? ? ? B . n D 1 6 PRO 6 857 ? ? ? B . n D 1 7 LEU 7 858 ? ? ? B . n D 1 8 LEU 8 859 ? ? ? B . n D 1 9 ALA 9 860 ? ? ? B . n D 1 10 ALA 10 861 ? ? ? B . n D 1 11 GLN 11 862 ? ? ? B . n D 1 12 PRO 12 863 ? ? ? B . n D 1 13 ARG 13 864 ? ? ? B . n D 1 14 ARG 14 865 ? ? ? B . n D 1 15 GLN 15 866 ? ? ? B . n D 1 16 ALA 16 867 ? ? ? B . n D 1 17 LYS 17 868 868 LYS LYS B . n D 1 18 GLN 18 869 869 GLN GLN B . n D 1 19 HIS 19 870 870 HIS HIS B . n D 1 20 GLY 20 871 871 GLY GLY B . n D 1 21 CYS 21 872 872 CYS CYS B . n D 1 22 THR 22 873 873 THR THR B . n D 1 23 ARG 23 874 874 ARG ARG B . n D 1 24 CYS 24 875 875 CYS CYS B . n D 1 25 GLY 25 876 876 GLY GLY B . n D 1 26 LYS 26 877 877 LYS LYS B . n D 1 27 ASN 27 878 878 ASN ASN B . n D 1 28 PHE 28 879 879 PHE PHE B . n D 1 29 SER 29 880 880 SER SER B . n D 1 30 SER 30 881 881 SER SER B . n D 1 31 ALA 31 882 882 ALA ALA B . n D 1 32 SER 32 883 883 SER SER B . n D 1 33 ALA 33 884 884 ALA ALA B . n D 1 34 LEU 34 885 885 LEU LEU B . n D 1 35 GLN 35 886 886 GLN GLN B . n D 1 36 ILE 36 887 887 ILE ILE B . n D 1 37 HIS 37 888 888 HIS HIS B . n D 1 38 GLU 38 889 889 GLU GLU B . n D 1 39 ARG 39 890 890 ARG ARG B . n D 1 40 THR 40 891 891 THR THR B . n D 1 41 HIS 41 892 892 HIS HIS B . n D 1 42 THR 42 893 893 THR THR B . n D 1 43 GLY 43 894 894 GLY GLY B . n D 1 44 GLU 44 895 895 GLU GLU B . n D 1 45 LYS 45 896 896 LYS LYS B . n D 1 46 PRO 46 897 897 PRO PRO B . n D 1 47 PHE 47 898 898 PHE PHE B . n D 1 48 VAL 48 899 899 VAL VAL B . n D 1 49 CYS 49 900 900 CYS CYS B . n D 1 50 ASN 50 901 901 ASN ASN B . n D 1 51 ILE 51 902 902 ILE ILE B . n D 1 52 CYS 52 903 903 CYS CYS B . n D 1 53 GLY 53 904 904 GLY GLY B . n D 1 54 ARG 54 905 905 ARG ARG B . n D 1 55 ALA 55 906 906 ALA ALA B . n D 1 56 PHE 56 907 907 PHE PHE B . n D 1 57 THR 57 908 908 THR THR B . n D 1 58 THR 58 909 909 THR THR B . n D 1 59 LYS 59 910 910 LYS LYS B . n D 1 60 GLY 60 911 911 GLY GLY B . n D 1 61 ASN 61 912 912 ASN ASN B . n D 1 62 LEU 62 913 913 LEU LEU B . n D 1 63 LYS 63 914 914 LYS LYS B . n D 1 64 VAL 64 915 915 VAL VAL B . n D 1 65 HIS 65 916 916 HIS HIS B . n D 1 66 TYR 66 917 917 TYR TYR B . n D 1 67 MET 67 918 918 MET MET B . n D 1 68 THR 68 919 919 THR THR B . n D 1 69 HIS 69 920 920 HIS HIS B . n D 1 70 GLY 70 921 921 GLY GLY B . n D 1 71 ALA 71 922 ? ? ? B . n D 1 72 ASN 72 923 ? ? ? B . n D 1 73 ASN 73 924 ? ? ? B . n D 1 74 ASN 74 925 ? ? ? B . n D 1 75 SER 75 926 ? ? ? B . n D 1 76 ALA 76 927 ? ? ? B . n D 1 77 ARG 77 928 ? ? ? B . n D 1 78 ARG 78 929 ? ? ? B . n D 1 79 GLY 79 930 ? ? ? B . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email ruwenwen@mail.ustc.edu.cn _pdbx_contact_author.name_first Wenwen _pdbx_contact_author.name_last Ru _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-2050-1983 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 ZN 1 1000 1000 ZN ZN A . F 4 ZN 1 1001 1001 ZN ZN A . G 4 ZN 1 1000 1000 ZN ZN B . H 4 ZN 1 1001 1001 ZN ZN B . I 5 HOH 1 1101 4 HOH HOH A . I 5 HOH 2 1102 12 HOH HOH A . I 5 HOH 3 1103 11 HOH HOH A . I 5 HOH 4 1104 13 HOH HOH A . I 5 HOH 5 1105 9 HOH HOH A . J 5 HOH 1 101 3 HOH HOH G . J 5 HOH 2 102 2 HOH HOH G . J 5 HOH 3 103 14 HOH HOH G . J 5 HOH 4 104 10 HOH HOH G . K 5 HOH 1 101 5 HOH HOH H . K 5 HOH 2 102 6 HOH HOH H . K 5 HOH 3 103 16 HOH HOH H . K 5 HOH 4 104 1 HOH HOH H . K 5 HOH 5 105 8 HOH HOH H . K 5 HOH 6 106 7 HOH HOH H . K 5 HOH 7 107 15 HOH HOH H . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4130 ? 1 MORE -41 ? 1 'SSA (A^2)' 11340 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 21 ? A CYS 872 ? 1_555 ZN ? E ZN . ? A ZN 1000 ? 1_555 SG ? A CYS 24 ? A CYS 875 ? 1_555 133.6 ? 2 SG ? A CYS 21 ? A CYS 872 ? 1_555 ZN ? E ZN . ? A ZN 1000 ? 1_555 NE2 ? A HIS 37 ? A HIS 888 ? 1_555 100.1 ? 3 SG ? A CYS 24 ? A CYS 875 ? 1_555 ZN ? E ZN . ? A ZN 1000 ? 1_555 NE2 ? A HIS 37 ? A HIS 888 ? 1_555 95.9 ? 4 SG ? A CYS 21 ? A CYS 872 ? 1_555 ZN ? E ZN . ? A ZN 1000 ? 1_555 NE2 ? A HIS 41 ? A HIS 892 ? 1_555 98.4 ? 5 SG ? A CYS 24 ? A CYS 875 ? 1_555 ZN ? E ZN . ? A ZN 1000 ? 1_555 NE2 ? A HIS 41 ? A HIS 892 ? 1_555 120.4 ? 6 NE2 ? A HIS 37 ? A HIS 888 ? 1_555 ZN ? E ZN . ? A ZN 1000 ? 1_555 NE2 ? A HIS 41 ? A HIS 892 ? 1_555 102.1 ? 7 SG ? A CYS 49 ? A CYS 900 ? 1_555 ZN ? F ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 52 ? A CYS 903 ? 1_555 103.7 ? 8 SG ? A CYS 49 ? A CYS 900 ? 1_555 ZN ? F ZN . ? A ZN 1001 ? 1_555 NE2 ? A HIS 65 ? A HIS 916 ? 1_555 116.1 ? 9 SG ? A CYS 52 ? A CYS 903 ? 1_555 ZN ? F ZN . ? A ZN 1001 ? 1_555 NE2 ? A HIS 65 ? A HIS 916 ? 1_555 106.8 ? 10 SG ? A CYS 49 ? A CYS 900 ? 1_555 ZN ? F ZN . ? A ZN 1001 ? 1_555 NE2 ? A HIS 69 ? A HIS 920 ? 1_555 108.5 ? 11 SG ? A CYS 52 ? A CYS 903 ? 1_555 ZN ? F ZN . ? A ZN 1001 ? 1_555 NE2 ? A HIS 69 ? A HIS 920 ? 1_555 114.7 ? 12 NE2 ? A HIS 65 ? A HIS 916 ? 1_555 ZN ? F ZN . ? A ZN 1001 ? 1_555 NE2 ? A HIS 69 ? A HIS 920 ? 1_555 107.3 ? 13 SG ? D CYS 21 ? B CYS 872 ? 1_555 ZN ? G ZN . ? B ZN 1000 ? 1_555 SG ? D CYS 24 ? B CYS 875 ? 1_555 99.2 ? 14 SG ? D CYS 21 ? B CYS 872 ? 1_555 ZN ? G ZN . ? B ZN 1000 ? 1_555 NE2 ? D HIS 37 ? B HIS 888 ? 1_555 96.9 ? 15 SG ? D CYS 24 ? B CYS 875 ? 1_555 ZN ? G ZN . ? B ZN 1000 ? 1_555 NE2 ? D HIS 37 ? B HIS 888 ? 1_555 84.2 ? 16 SG ? D CYS 21 ? B CYS 872 ? 1_555 ZN ? G ZN . ? B ZN 1000 ? 1_555 NE2 ? D HIS 41 ? B HIS 892 ? 1_555 105.2 ? 17 SG ? D CYS 24 ? B CYS 875 ? 1_555 ZN ? G ZN . ? B ZN 1000 ? 1_555 NE2 ? D HIS 41 ? B HIS 892 ? 1_555 155.2 ? 18 NE2 ? D HIS 37 ? B HIS 888 ? 1_555 ZN ? G ZN . ? B ZN 1000 ? 1_555 NE2 ? D HIS 41 ? B HIS 892 ? 1_555 88.8 ? 19 SG ? D CYS 49 ? B CYS 900 ? 1_555 ZN ? H ZN . ? B ZN 1001 ? 1_555 SG ? D CYS 52 ? B CYS 903 ? 1_555 125.6 ? 20 SG ? D CYS 49 ? B CYS 900 ? 1_555 ZN ? H ZN . ? B ZN 1001 ? 1_555 NE2 ? D HIS 65 ? B HIS 916 ? 1_555 111.8 ? 21 SG ? D CYS 52 ? B CYS 903 ? 1_555 ZN ? H ZN . ? B ZN 1001 ? 1_555 NE2 ? D HIS 65 ? B HIS 916 ? 1_555 90.8 ? 22 SG ? D CYS 49 ? B CYS 900 ? 1_555 ZN ? H ZN . ? B ZN 1001 ? 1_555 NE2 ? D HIS 69 ? B HIS 920 ? 1_555 102.3 ? 23 SG ? D CYS 52 ? B CYS 903 ? 1_555 ZN ? H ZN . ? B ZN 1001 ? 1_555 NE2 ? D HIS 69 ? B HIS 920 ? 1_555 116.1 ? 24 NE2 ? D HIS 65 ? B HIS 916 ? 1_555 ZN ? H ZN . ? B ZN 1001 ? 1_555 NE2 ? D HIS 69 ? B HIS 920 ? 1_555 109.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-10-26 2 'Structure model' 1 1 2022-11-02 3 'Structure model' 1 2 2022-11-30 4 'Structure model' 1 3 2023-11-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' pdbx_initial_refinement_model # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 3 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_citation.journal_volume' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 12.7287 3.9788 23.9715 0.3405 ? 0.0100 ? -0.0322 ? 0.3239 ? -0.0489 ? 0.4171 ? 1.5268 ? 0.4275 ? -0.5863 ? 0.2354 ? -0.5329 ? 0.1478 ? -0.0711 ? -0.3240 ? 0.3149 ? 0.0838 ? 0.0732 ? 0.5078 ? -0.0431 ? 0.0016 ? 0.0005 ? 2 'X-RAY DIFFRACTION' ? refined 10.0052 0.3495 15.1760 0.4011 ? -0.0082 ? 0.0400 ? 0.3762 ? -0.0638 ? 0.3629 ? 1.0812 ? 0.9488 ? 0.0775 ? 0.7740 ? 0.1775 ? 0.8023 ? -0.0936 ? -0.0731 ? 0.1188 ? 0.0384 ? 0.2032 ? 0.1059 ? 0.1282 ? 0.0826 ? -0.0000 ? 3 'X-RAY DIFFRACTION' ? refined 10.2258 -1.2799 12.4049 0.3990 ? -0.0066 ? 0.0105 ? 0.4475 ? -0.1300 ? 0.4422 ? 0.1704 ? 0.3523 ? -0.0898 ? 1.8865 ? -0.7992 ? 0.9299 ? -0.0282 ? 0.5007 ? -0.0844 ? 0.0878 ? -0.1731 ? 0.2973 ? 0.0788 ? -0.0600 ? 0.0006 ? 4 'X-RAY DIFFRACTION' ? refined 13.0760 -0.4978 0.4626 0.6156 ? -0.0858 ? -0.0529 ? 0.6795 ? -0.0106 ? 0.4701 ? 0.2734 ? -0.3091 ? -0.1415 ? 0.7743 ? 0.4845 ? 0.9901 ? -0.2982 ? 0.1002 ? 0.4568 ? -0.5362 ? 0.1104 ? -0.0032 ? 0.1010 ? 0.2924 ? -0.0109 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 868 ? ? ? A 921 ? ? ;(chain 'A' and resid 868 through 921) ; 2 'X-RAY DIFFRACTION' 2 ? ? G 1 ? ? ? G 16 ? ? ;(chain 'G' and resid 1 through 16) ; 3 'X-RAY DIFFRACTION' 3 ? ? H 1 ? ? ? H 16 ? ? ;(chain 'H' and resid 1 through 16) ; 4 'X-RAY DIFFRACTION' 4 ? ? B 868 ? ? ? B 921 ? ? ;(chain 'B' and resid 868 through 921) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.14_3260 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _pdbx_entry_details.entry_id 7Y3K _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O4'" _pdbx_validate_rmsd_angle.auth_asym_id_1 H _pdbx_validate_rmsd_angle.auth_comp_id_1 DG _pdbx_validate_rmsd_angle.auth_seq_id_1 2 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C1'" _pdbx_validate_rmsd_angle.auth_asym_id_2 H _pdbx_validate_rmsd_angle.auth_comp_id_2 DG _pdbx_validate_rmsd_angle.auth_seq_id_2 2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N9 _pdbx_validate_rmsd_angle.auth_asym_id_3 H _pdbx_validate_rmsd_angle.auth_comp_id_3 DG _pdbx_validate_rmsd_angle.auth_seq_id_3 2 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 110.14 _pdbx_validate_rmsd_angle.angle_target_value 108.30 _pdbx_validate_rmsd_angle.angle_deviation 1.84 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR B 873 ? ? -76.14 43.71 2 1 ARG B 874 ? ? -143.76 -27.39 3 1 TYR B 917 ? ? -58.96 -6.74 4 1 HIS B 920 ? ? -102.82 50.39 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 868 ? CG ? A LYS 17 CG 2 1 Y 1 A LYS 868 ? CD ? A LYS 17 CD 3 1 Y 1 A LYS 868 ? CE ? A LYS 17 CE 4 1 Y 1 A LYS 868 ? NZ ? A LYS 17 NZ 5 1 Y 1 B LYS 868 ? CG ? D LYS 17 CG 6 1 Y 1 B LYS 868 ? CD ? D LYS 17 CD 7 1 Y 1 B LYS 868 ? CE ? D LYS 17 CE 8 1 Y 1 B LYS 868 ? NZ ? D LYS 17 NZ 9 1 Y 1 B GLN 869 ? CG ? D GLN 18 CG 10 1 Y 1 B GLN 869 ? CD ? D GLN 18 CD 11 1 Y 1 B GLN 869 ? OE1 ? D GLN 18 OE1 12 1 Y 1 B GLN 869 ? NE2 ? D GLN 18 NE2 13 1 Y 1 B LYS 910 ? CG ? D LYS 59 CG 14 1 Y 1 B LYS 910 ? CD ? D LYS 59 CD 15 1 Y 1 B LYS 910 ? CE ? D LYS 59 CE 16 1 Y 1 B LYS 910 ? NZ ? D LYS 59 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 852 ? A GLY 1 2 1 Y 1 A HIS 853 ? A HIS 2 3 1 Y 1 A MET 854 ? A MET 3 4 1 Y 1 A MET 855 ? A MET 4 5 1 Y 1 A THR 856 ? A THR 5 6 1 Y 1 A PRO 857 ? A PRO 6 7 1 Y 1 A LEU 858 ? A LEU 7 8 1 Y 1 A LEU 859 ? A LEU 8 9 1 Y 1 A ALA 860 ? A ALA 9 10 1 Y 1 A ALA 861 ? A ALA 10 11 1 Y 1 A GLN 862 ? A GLN 11 12 1 Y 1 A PRO 863 ? A PRO 12 13 1 Y 1 A ARG 864 ? A ARG 13 14 1 Y 1 A ARG 865 ? A ARG 14 15 1 Y 1 A GLN 866 ? A GLN 15 16 1 Y 1 A ALA 867 ? A ALA 16 17 1 Y 1 A ALA 922 ? A ALA 71 18 1 Y 1 A ASN 923 ? A ASN 72 19 1 Y 1 A ASN 924 ? A ASN 73 20 1 Y 1 A ASN 925 ? A ASN 74 21 1 Y 1 A SER 926 ? A SER 75 22 1 Y 1 A ALA 927 ? A ALA 76 23 1 Y 1 A ARG 928 ? A ARG 77 24 1 Y 1 A ARG 929 ? A ARG 78 25 1 Y 1 A GLY 930 ? A GLY 79 26 1 Y 1 B GLY 852 ? D GLY 1 27 1 Y 1 B HIS 853 ? D HIS 2 28 1 Y 1 B MET 854 ? D MET 3 29 1 Y 1 B MET 855 ? D MET 4 30 1 Y 1 B THR 856 ? D THR 5 31 1 Y 1 B PRO 857 ? D PRO 6 32 1 Y 1 B LEU 858 ? D LEU 7 33 1 Y 1 B LEU 859 ? D LEU 8 34 1 Y 1 B ALA 860 ? D ALA 9 35 1 Y 1 B ALA 861 ? D ALA 10 36 1 Y 1 B GLN 862 ? D GLN 11 37 1 Y 1 B PRO 863 ? D PRO 12 38 1 Y 1 B ARG 864 ? D ARG 13 39 1 Y 1 B ARG 865 ? D ARG 14 40 1 Y 1 B GLN 866 ? D GLN 15 41 1 Y 1 B ALA 867 ? D ALA 16 42 1 Y 1 B ALA 922 ? D ALA 71 43 1 Y 1 B ASN 923 ? D ASN 72 44 1 Y 1 B ASN 924 ? D ASN 73 45 1 Y 1 B ASN 925 ? D ASN 74 46 1 Y 1 B SER 926 ? D SER 75 47 1 Y 1 B ALA 927 ? D ALA 76 48 1 Y 1 B ARG 928 ? D ARG 77 49 1 Y 1 B ARG 929 ? D ARG 78 50 1 Y 1 B GLY 930 ? D GLY 79 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 CYS N N N N 58 CYS CA C N R 59 CYS C C N N 60 CYS O O N N 61 CYS CB C N N 62 CYS SG S N N 63 CYS OXT O N N 64 CYS H H N N 65 CYS H2 H N N 66 CYS HA H N N 67 CYS HB2 H N N 68 CYS HB3 H N N 69 CYS HG H N N 70 CYS HXT H N N 71 DA OP3 O N N 72 DA P P N N 73 DA OP1 O N N 74 DA OP2 O N N 75 DA "O5'" O N N 76 DA "C5'" C N N 77 DA "C4'" C N R 78 DA "O4'" O N N 79 DA "C3'" C N S 80 DA "O3'" O N N 81 DA "C2'" C N N 82 DA "C1'" C N R 83 DA N9 N Y N 84 DA C8 C Y N 85 DA N7 N Y N 86 DA C5 C Y N 87 DA C6 C Y N 88 DA N6 N N N 89 DA N1 N Y N 90 DA C2 C Y N 91 DA N3 N Y N 92 DA C4 C Y N 93 DA HOP3 H N N 94 DA HOP2 H N N 95 DA "H5'" H N N 96 DA "H5''" H N N 97 DA "H4'" H N N 98 DA "H3'" H N N 99 DA "HO3'" H N N 100 DA "H2'" H N N 101 DA "H2''" H N N 102 DA "H1'" H N N 103 DA H8 H N N 104 DA H61 H N N 105 DA H62 H N N 106 DA H2 H N N 107 DC OP3 O N N 108 DC P P N N 109 DC OP1 O N N 110 DC OP2 O N N 111 DC "O5'" O N N 112 DC "C5'" C N N 113 DC "C4'" C N R 114 DC "O4'" O N N 115 DC "C3'" C N S 116 DC "O3'" O N N 117 DC "C2'" C N N 118 DC "C1'" C N R 119 DC N1 N N N 120 DC C2 C N N 121 DC O2 O N N 122 DC N3 N N N 123 DC C4 C N N 124 DC N4 N N N 125 DC C5 C N N 126 DC C6 C N N 127 DC HOP3 H N N 128 DC HOP2 H N N 129 DC "H5'" H N N 130 DC "H5''" H N N 131 DC "H4'" H N N 132 DC "H3'" H N N 133 DC "HO3'" H N N 134 DC "H2'" H N N 135 DC "H2''" H N N 136 DC "H1'" H N N 137 DC H41 H N N 138 DC H42 H N N 139 DC H5 H N N 140 DC H6 H N N 141 DG OP3 O N N 142 DG P P N N 143 DG OP1 O N N 144 DG OP2 O N N 145 DG "O5'" O N N 146 DG "C5'" C N N 147 DG "C4'" C N R 148 DG "O4'" O N N 149 DG "C3'" C N S 150 DG "O3'" O N N 151 DG "C2'" C N N 152 DG "C1'" C N R 153 DG N9 N Y N 154 DG C8 C Y N 155 DG N7 N Y N 156 DG C5 C Y N 157 DG C6 C N N 158 DG O6 O N N 159 DG N1 N N N 160 DG C2 C N N 161 DG N2 N N N 162 DG N3 N N N 163 DG C4 C Y N 164 DG HOP3 H N N 165 DG HOP2 H N N 166 DG "H5'" H N N 167 DG "H5''" H N N 168 DG "H4'" H N N 169 DG "H3'" H N N 170 DG "HO3'" H N N 171 DG "H2'" H N N 172 DG "H2''" H N N 173 DG "H1'" H N N 174 DG H8 H N N 175 DG H1 H N N 176 DG H21 H N N 177 DG H22 H N N 178 DT OP3 O N N 179 DT P P N N 180 DT OP1 O N N 181 DT OP2 O N N 182 DT "O5'" O N N 183 DT "C5'" C N N 184 DT "C4'" C N R 185 DT "O4'" O N N 186 DT "C3'" C N S 187 DT "O3'" O N N 188 DT "C2'" C N N 189 DT "C1'" C N R 190 DT N1 N N N 191 DT C2 C N N 192 DT O2 O N N 193 DT N3 N N N 194 DT C4 C N N 195 DT O4 O N N 196 DT C5 C N N 197 DT C7 C N N 198 DT C6 C N N 199 DT HOP3 H N N 200 DT HOP2 H N N 201 DT "H5'" H N N 202 DT "H5''" H N N 203 DT "H4'" H N N 204 DT "H3'" H N N 205 DT "HO3'" H N N 206 DT "H2'" H N N 207 DT "H2''" H N N 208 DT "H1'" H N N 209 DT H3 H N N 210 DT H71 H N N 211 DT H72 H N N 212 DT H73 H N N 213 DT H6 H N N 214 GLN N N N N 215 GLN CA C N S 216 GLN C C N N 217 GLN O O N N 218 GLN CB C N N 219 GLN CG C N N 220 GLN CD C N N 221 GLN OE1 O N N 222 GLN NE2 N N N 223 GLN OXT O N N 224 GLN H H N N 225 GLN H2 H N N 226 GLN HA H N N 227 GLN HB2 H N N 228 GLN HB3 H N N 229 GLN HG2 H N N 230 GLN HG3 H N N 231 GLN HE21 H N N 232 GLN HE22 H N N 233 GLN HXT H N N 234 GLU N N N N 235 GLU CA C N S 236 GLU C C N N 237 GLU O O N N 238 GLU CB C N N 239 GLU CG C N N 240 GLU CD C N N 241 GLU OE1 O N N 242 GLU OE2 O N N 243 GLU OXT O N N 244 GLU H H N N 245 GLU H2 H N N 246 GLU HA H N N 247 GLU HB2 H N N 248 GLU HB3 H N N 249 GLU HG2 H N N 250 GLU HG3 H N N 251 GLU HE2 H N N 252 GLU HXT H N N 253 GLY N N N N 254 GLY CA C N N 255 GLY C C N N 256 GLY O O N N 257 GLY OXT O N N 258 GLY H H N N 259 GLY H2 H N N 260 GLY HA2 H N N 261 GLY HA3 H N N 262 GLY HXT H N N 263 HIS N N N N 264 HIS CA C N S 265 HIS C C N N 266 HIS O O N N 267 HIS CB C N N 268 HIS CG C Y N 269 HIS ND1 N Y N 270 HIS CD2 C Y N 271 HIS CE1 C Y N 272 HIS NE2 N Y N 273 HIS OXT O N N 274 HIS H H N N 275 HIS H2 H N N 276 HIS HA H N N 277 HIS HB2 H N N 278 HIS HB3 H N N 279 HIS HD1 H N N 280 HIS HD2 H N N 281 HIS HE1 H N N 282 HIS HE2 H N N 283 HIS HXT H N N 284 HOH O O N N 285 HOH H1 H N N 286 HOH H2 H N N 287 ILE N N N N 288 ILE CA C N S 289 ILE C C N N 290 ILE O O N N 291 ILE CB C N S 292 ILE CG1 C N N 293 ILE CG2 C N N 294 ILE CD1 C N N 295 ILE OXT O N N 296 ILE H H N N 297 ILE H2 H N N 298 ILE HA H N N 299 ILE HB H N N 300 ILE HG12 H N N 301 ILE HG13 H N N 302 ILE HG21 H N N 303 ILE HG22 H N N 304 ILE HG23 H N N 305 ILE HD11 H N N 306 ILE HD12 H N N 307 ILE HD13 H N N 308 ILE HXT H N N 309 LEU N N N N 310 LEU CA C N S 311 LEU C C N N 312 LEU O O N N 313 LEU CB C N N 314 LEU CG C N N 315 LEU CD1 C N N 316 LEU CD2 C N N 317 LEU OXT O N N 318 LEU H H N N 319 LEU H2 H N N 320 LEU HA H N N 321 LEU HB2 H N N 322 LEU HB3 H N N 323 LEU HG H N N 324 LEU HD11 H N N 325 LEU HD12 H N N 326 LEU HD13 H N N 327 LEU HD21 H N N 328 LEU HD22 H N N 329 LEU HD23 H N N 330 LEU HXT H N N 331 LYS N N N N 332 LYS CA C N S 333 LYS C C N N 334 LYS O O N N 335 LYS CB C N N 336 LYS CG C N N 337 LYS CD C N N 338 LYS CE C N N 339 LYS NZ N N N 340 LYS OXT O N N 341 LYS H H N N 342 LYS H2 H N N 343 LYS HA H N N 344 LYS HB2 H N N 345 LYS HB3 H N N 346 LYS HG2 H N N 347 LYS HG3 H N N 348 LYS HD2 H N N 349 LYS HD3 H N N 350 LYS HE2 H N N 351 LYS HE3 H N N 352 LYS HZ1 H N N 353 LYS HZ2 H N N 354 LYS HZ3 H N N 355 LYS HXT H N N 356 MET N N N N 357 MET CA C N S 358 MET C C N N 359 MET O O N N 360 MET CB C N N 361 MET CG C N N 362 MET SD S N N 363 MET CE C N N 364 MET OXT O N N 365 MET H H N N 366 MET H2 H N N 367 MET HA H N N 368 MET HB2 H N N 369 MET HB3 H N N 370 MET HG2 H N N 371 MET HG3 H N N 372 MET HE1 H N N 373 MET HE2 H N N 374 MET HE3 H N N 375 MET HXT H N N 376 PHE N N N N 377 PHE CA C N S 378 PHE C C N N 379 PHE O O N N 380 PHE CB C N N 381 PHE CG C Y N 382 PHE CD1 C Y N 383 PHE CD2 C Y N 384 PHE CE1 C Y N 385 PHE CE2 C Y N 386 PHE CZ C Y N 387 PHE OXT O N N 388 PHE H H N N 389 PHE H2 H N N 390 PHE HA H N N 391 PHE HB2 H N N 392 PHE HB3 H N N 393 PHE HD1 H N N 394 PHE HD2 H N N 395 PHE HE1 H N N 396 PHE HE2 H N N 397 PHE HZ H N N 398 PHE HXT H N N 399 PRO N N N N 400 PRO CA C N S 401 PRO C C N N 402 PRO O O N N 403 PRO CB C N N 404 PRO CG C N N 405 PRO CD C N N 406 PRO OXT O N N 407 PRO H H N N 408 PRO HA H N N 409 PRO HB2 H N N 410 PRO HB3 H N N 411 PRO HG2 H N N 412 PRO HG3 H N N 413 PRO HD2 H N N 414 PRO HD3 H N N 415 PRO HXT H N N 416 SER N N N N 417 SER CA C N S 418 SER C C N N 419 SER O O N N 420 SER CB C N N 421 SER OG O N N 422 SER OXT O N N 423 SER H H N N 424 SER H2 H N N 425 SER HA H N N 426 SER HB2 H N N 427 SER HB3 H N N 428 SER HG H N N 429 SER HXT H N N 430 THR N N N N 431 THR CA C N S 432 THR C C N N 433 THR O O N N 434 THR CB C N R 435 THR OG1 O N N 436 THR CG2 C N N 437 THR OXT O N N 438 THR H H N N 439 THR H2 H N N 440 THR HA H N N 441 THR HB H N N 442 THR HG1 H N N 443 THR HG21 H N N 444 THR HG22 H N N 445 THR HG23 H N N 446 THR HXT H N N 447 TYR N N N N 448 TYR CA C N S 449 TYR C C N N 450 TYR O O N N 451 TYR CB C N N 452 TYR CG C Y N 453 TYR CD1 C Y N 454 TYR CD2 C Y N 455 TYR CE1 C Y N 456 TYR CE2 C Y N 457 TYR CZ C Y N 458 TYR OH O N N 459 TYR OXT O N N 460 TYR H H N N 461 TYR H2 H N N 462 TYR HA H N N 463 TYR HB2 H N N 464 TYR HB3 H N N 465 TYR HD1 H N N 466 TYR HD2 H N N 467 TYR HE1 H N N 468 TYR HE2 H N N 469 TYR HH H N N 470 TYR HXT H N N 471 VAL N N N N 472 VAL CA C N S 473 VAL C C N N 474 VAL O O N N 475 VAL CB C N N 476 VAL CG1 C N N 477 VAL CG2 C N N 478 VAL OXT O N N 479 VAL H H N N 480 VAL H2 H N N 481 VAL HA H N N 482 VAL HB H N N 483 VAL HG11 H N N 484 VAL HG12 H N N 485 VAL HG13 H N N 486 VAL HG21 H N N 487 VAL HG22 H N N 488 VAL HG23 H N N 489 VAL HXT H N N 490 ZN ZN ZN N N 491 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 CYS N CA sing N N 55 CYS N H sing N N 56 CYS N H2 sing N N 57 CYS CA C sing N N 58 CYS CA CB sing N N 59 CYS CA HA sing N N 60 CYS C O doub N N 61 CYS C OXT sing N N 62 CYS CB SG sing N N 63 CYS CB HB2 sing N N 64 CYS CB HB3 sing N N 65 CYS SG HG sing N N 66 CYS OXT HXT sing N N 67 DA OP3 P sing N N 68 DA OP3 HOP3 sing N N 69 DA P OP1 doub N N 70 DA P OP2 sing N N 71 DA P "O5'" sing N N 72 DA OP2 HOP2 sing N N 73 DA "O5'" "C5'" sing N N 74 DA "C5'" "C4'" sing N N 75 DA "C5'" "H5'" sing N N 76 DA "C5'" "H5''" sing N N 77 DA "C4'" "O4'" sing N N 78 DA "C4'" "C3'" sing N N 79 DA "C4'" "H4'" sing N N 80 DA "O4'" "C1'" sing N N 81 DA "C3'" "O3'" sing N N 82 DA "C3'" "C2'" sing N N 83 DA "C3'" "H3'" sing N N 84 DA "O3'" "HO3'" sing N N 85 DA "C2'" "C1'" sing N N 86 DA "C2'" "H2'" sing N N 87 DA "C2'" "H2''" sing N N 88 DA "C1'" N9 sing N N 89 DA "C1'" "H1'" sing N N 90 DA N9 C8 sing Y N 91 DA N9 C4 sing Y N 92 DA C8 N7 doub Y N 93 DA C8 H8 sing N N 94 DA N7 C5 sing Y N 95 DA C5 C6 sing Y N 96 DA C5 C4 doub Y N 97 DA C6 N6 sing N N 98 DA C6 N1 doub Y N 99 DA N6 H61 sing N N 100 DA N6 H62 sing N N 101 DA N1 C2 sing Y N 102 DA C2 N3 doub Y N 103 DA C2 H2 sing N N 104 DA N3 C4 sing Y N 105 DC OP3 P sing N N 106 DC OP3 HOP3 sing N N 107 DC P OP1 doub N N 108 DC P OP2 sing N N 109 DC P "O5'" sing N N 110 DC OP2 HOP2 sing N N 111 DC "O5'" "C5'" sing N N 112 DC "C5'" "C4'" sing N N 113 DC "C5'" "H5'" sing N N 114 DC "C5'" "H5''" sing N N 115 DC "C4'" "O4'" sing N N 116 DC "C4'" "C3'" sing N N 117 DC "C4'" "H4'" sing N N 118 DC "O4'" "C1'" sing N N 119 DC "C3'" "O3'" sing N N 120 DC "C3'" "C2'" sing N N 121 DC "C3'" "H3'" sing N N 122 DC "O3'" "HO3'" sing N N 123 DC "C2'" "C1'" sing N N 124 DC "C2'" "H2'" sing N N 125 DC "C2'" "H2''" sing N N 126 DC "C1'" N1 sing N N 127 DC "C1'" "H1'" sing N N 128 DC N1 C2 sing N N 129 DC N1 C6 sing N N 130 DC C2 O2 doub N N 131 DC C2 N3 sing N N 132 DC N3 C4 doub N N 133 DC C4 N4 sing N N 134 DC C4 C5 sing N N 135 DC N4 H41 sing N N 136 DC N4 H42 sing N N 137 DC C5 C6 doub N N 138 DC C5 H5 sing N N 139 DC C6 H6 sing N N 140 DG OP3 P sing N N 141 DG OP3 HOP3 sing N N 142 DG P OP1 doub N N 143 DG P OP2 sing N N 144 DG P "O5'" sing N N 145 DG OP2 HOP2 sing N N 146 DG "O5'" "C5'" sing N N 147 DG "C5'" "C4'" sing N N 148 DG "C5'" "H5'" sing N N 149 DG "C5'" "H5''" sing N N 150 DG "C4'" "O4'" sing N N 151 DG "C4'" "C3'" sing N N 152 DG "C4'" "H4'" sing N N 153 DG "O4'" "C1'" sing N N 154 DG "C3'" "O3'" sing N N 155 DG "C3'" "C2'" sing N N 156 DG "C3'" "H3'" sing N N 157 DG "O3'" "HO3'" sing N N 158 DG "C2'" "C1'" sing N N 159 DG "C2'" "H2'" sing N N 160 DG "C2'" "H2''" sing N N 161 DG "C1'" N9 sing N N 162 DG "C1'" "H1'" sing N N 163 DG N9 C8 sing Y N 164 DG N9 C4 sing Y N 165 DG C8 N7 doub Y N 166 DG C8 H8 sing N N 167 DG N7 C5 sing Y N 168 DG C5 C6 sing N N 169 DG C5 C4 doub Y N 170 DG C6 O6 doub N N 171 DG C6 N1 sing N N 172 DG N1 C2 sing N N 173 DG N1 H1 sing N N 174 DG C2 N2 sing N N 175 DG C2 N3 doub N N 176 DG N2 H21 sing N N 177 DG N2 H22 sing N N 178 DG N3 C4 sing N N 179 DT OP3 P sing N N 180 DT OP3 HOP3 sing N N 181 DT P OP1 doub N N 182 DT P OP2 sing N N 183 DT P "O5'" sing N N 184 DT OP2 HOP2 sing N N 185 DT "O5'" "C5'" sing N N 186 DT "C5'" "C4'" sing N N 187 DT "C5'" "H5'" sing N N 188 DT "C5'" "H5''" sing N N 189 DT "C4'" "O4'" sing N N 190 DT "C4'" "C3'" sing N N 191 DT "C4'" "H4'" sing N N 192 DT "O4'" "C1'" sing N N 193 DT "C3'" "O3'" sing N N 194 DT "C3'" "C2'" sing N N 195 DT "C3'" "H3'" sing N N 196 DT "O3'" "HO3'" sing N N 197 DT "C2'" "C1'" sing N N 198 DT "C2'" "H2'" sing N N 199 DT "C2'" "H2''" sing N N 200 DT "C1'" N1 sing N N 201 DT "C1'" "H1'" sing N N 202 DT N1 C2 sing N N 203 DT N1 C6 sing N N 204 DT C2 O2 doub N N 205 DT C2 N3 sing N N 206 DT N3 C4 sing N N 207 DT N3 H3 sing N N 208 DT C4 O4 doub N N 209 DT C4 C5 sing N N 210 DT C5 C7 sing N N 211 DT C5 C6 doub N N 212 DT C7 H71 sing N N 213 DT C7 H72 sing N N 214 DT C7 H73 sing N N 215 DT C6 H6 sing N N 216 GLN N CA sing N N 217 GLN N H sing N N 218 GLN N H2 sing N N 219 GLN CA C sing N N 220 GLN CA CB sing N N 221 GLN CA HA sing N N 222 GLN C O doub N N 223 GLN C OXT sing N N 224 GLN CB CG sing N N 225 GLN CB HB2 sing N N 226 GLN CB HB3 sing N N 227 GLN CG CD sing N N 228 GLN CG HG2 sing N N 229 GLN CG HG3 sing N N 230 GLN CD OE1 doub N N 231 GLN CD NE2 sing N N 232 GLN NE2 HE21 sing N N 233 GLN NE2 HE22 sing N N 234 GLN OXT HXT sing N N 235 GLU N CA sing N N 236 GLU N H sing N N 237 GLU N H2 sing N N 238 GLU CA C sing N N 239 GLU CA CB sing N N 240 GLU CA HA sing N N 241 GLU C O doub N N 242 GLU C OXT sing N N 243 GLU CB CG sing N N 244 GLU CB HB2 sing N N 245 GLU CB HB3 sing N N 246 GLU CG CD sing N N 247 GLU CG HG2 sing N N 248 GLU CG HG3 sing N N 249 GLU CD OE1 doub N N 250 GLU CD OE2 sing N N 251 GLU OE2 HE2 sing N N 252 GLU OXT HXT sing N N 253 GLY N CA sing N N 254 GLY N H sing N N 255 GLY N H2 sing N N 256 GLY CA C sing N N 257 GLY CA HA2 sing N N 258 GLY CA HA3 sing N N 259 GLY C O doub N N 260 GLY C OXT sing N N 261 GLY OXT HXT sing N N 262 HIS N CA sing N N 263 HIS N H sing N N 264 HIS N H2 sing N N 265 HIS CA C sing N N 266 HIS CA CB sing N N 267 HIS CA HA sing N N 268 HIS C O doub N N 269 HIS C OXT sing N N 270 HIS CB CG sing N N 271 HIS CB HB2 sing N N 272 HIS CB HB3 sing N N 273 HIS CG ND1 sing Y N 274 HIS CG CD2 doub Y N 275 HIS ND1 CE1 doub Y N 276 HIS ND1 HD1 sing N N 277 HIS CD2 NE2 sing Y N 278 HIS CD2 HD2 sing N N 279 HIS CE1 NE2 sing Y N 280 HIS CE1 HE1 sing N N 281 HIS NE2 HE2 sing N N 282 HIS OXT HXT sing N N 283 HOH O H1 sing N N 284 HOH O H2 sing N N 285 ILE N CA sing N N 286 ILE N H sing N N 287 ILE N H2 sing N N 288 ILE CA C sing N N 289 ILE CA CB sing N N 290 ILE CA HA sing N N 291 ILE C O doub N N 292 ILE C OXT sing N N 293 ILE CB CG1 sing N N 294 ILE CB CG2 sing N N 295 ILE CB HB sing N N 296 ILE CG1 CD1 sing N N 297 ILE CG1 HG12 sing N N 298 ILE CG1 HG13 sing N N 299 ILE CG2 HG21 sing N N 300 ILE CG2 HG22 sing N N 301 ILE CG2 HG23 sing N N 302 ILE CD1 HD11 sing N N 303 ILE CD1 HD12 sing N N 304 ILE CD1 HD13 sing N N 305 ILE OXT HXT sing N N 306 LEU N CA sing N N 307 LEU N H sing N N 308 LEU N H2 sing N N 309 LEU CA C sing N N 310 LEU CA CB sing N N 311 LEU CA HA sing N N 312 LEU C O doub N N 313 LEU C OXT sing N N 314 LEU CB CG sing N N 315 LEU CB HB2 sing N N 316 LEU CB HB3 sing N N 317 LEU CG CD1 sing N N 318 LEU CG CD2 sing N N 319 LEU CG HG sing N N 320 LEU CD1 HD11 sing N N 321 LEU CD1 HD12 sing N N 322 LEU CD1 HD13 sing N N 323 LEU CD2 HD21 sing N N 324 LEU CD2 HD22 sing N N 325 LEU CD2 HD23 sing N N 326 LEU OXT HXT sing N N 327 LYS N CA sing N N 328 LYS N H sing N N 329 LYS N H2 sing N N 330 LYS CA C sing N N 331 LYS CA CB sing N N 332 LYS CA HA sing N N 333 LYS C O doub N N 334 LYS C OXT sing N N 335 LYS CB CG sing N N 336 LYS CB HB2 sing N N 337 LYS CB HB3 sing N N 338 LYS CG CD sing N N 339 LYS CG HG2 sing N N 340 LYS CG HG3 sing N N 341 LYS CD CE sing N N 342 LYS CD HD2 sing N N 343 LYS CD HD3 sing N N 344 LYS CE NZ sing N N 345 LYS CE HE2 sing N N 346 LYS CE HE3 sing N N 347 LYS NZ HZ1 sing N N 348 LYS NZ HZ2 sing N N 349 LYS NZ HZ3 sing N N 350 LYS OXT HXT sing N N 351 MET N CA sing N N 352 MET N H sing N N 353 MET N H2 sing N N 354 MET CA C sing N N 355 MET CA CB sing N N 356 MET CA HA sing N N 357 MET C O doub N N 358 MET C OXT sing N N 359 MET CB CG sing N N 360 MET CB HB2 sing N N 361 MET CB HB3 sing N N 362 MET CG SD sing N N 363 MET CG HG2 sing N N 364 MET CG HG3 sing N N 365 MET SD CE sing N N 366 MET CE HE1 sing N N 367 MET CE HE2 sing N N 368 MET CE HE3 sing N N 369 MET OXT HXT sing N N 370 PHE N CA sing N N 371 PHE N H sing N N 372 PHE N H2 sing N N 373 PHE CA C sing N N 374 PHE CA CB sing N N 375 PHE CA HA sing N N 376 PHE C O doub N N 377 PHE C OXT sing N N 378 PHE CB CG sing N N 379 PHE CB HB2 sing N N 380 PHE CB HB3 sing N N 381 PHE CG CD1 doub Y N 382 PHE CG CD2 sing Y N 383 PHE CD1 CE1 sing Y N 384 PHE CD1 HD1 sing N N 385 PHE CD2 CE2 doub Y N 386 PHE CD2 HD2 sing N N 387 PHE CE1 CZ doub Y N 388 PHE CE1 HE1 sing N N 389 PHE CE2 CZ sing Y N 390 PHE CE2 HE2 sing N N 391 PHE CZ HZ sing N N 392 PHE OXT HXT sing N N 393 PRO N CA sing N N 394 PRO N CD sing N N 395 PRO N H sing N N 396 PRO CA C sing N N 397 PRO CA CB sing N N 398 PRO CA HA sing N N 399 PRO C O doub N N 400 PRO C OXT sing N N 401 PRO CB CG sing N N 402 PRO CB HB2 sing N N 403 PRO CB HB3 sing N N 404 PRO CG CD sing N N 405 PRO CG HG2 sing N N 406 PRO CG HG3 sing N N 407 PRO CD HD2 sing N N 408 PRO CD HD3 sing N N 409 PRO OXT HXT sing N N 410 SER N CA sing N N 411 SER N H sing N N 412 SER N H2 sing N N 413 SER CA C sing N N 414 SER CA CB sing N N 415 SER CA HA sing N N 416 SER C O doub N N 417 SER C OXT sing N N 418 SER CB OG sing N N 419 SER CB HB2 sing N N 420 SER CB HB3 sing N N 421 SER OG HG sing N N 422 SER OXT HXT sing N N 423 THR N CA sing N N 424 THR N H sing N N 425 THR N H2 sing N N 426 THR CA C sing N N 427 THR CA CB sing N N 428 THR CA HA sing N N 429 THR C O doub N N 430 THR C OXT sing N N 431 THR CB OG1 sing N N 432 THR CB CG2 sing N N 433 THR CB HB sing N N 434 THR OG1 HG1 sing N N 435 THR CG2 HG21 sing N N 436 THR CG2 HG22 sing N N 437 THR CG2 HG23 sing N N 438 THR OXT HXT sing N N 439 TYR N CA sing N N 440 TYR N H sing N N 441 TYR N H2 sing N N 442 TYR CA C sing N N 443 TYR CA CB sing N N 444 TYR CA HA sing N N 445 TYR C O doub N N 446 TYR C OXT sing N N 447 TYR CB CG sing N N 448 TYR CB HB2 sing N N 449 TYR CB HB3 sing N N 450 TYR CG CD1 doub Y N 451 TYR CG CD2 sing Y N 452 TYR CD1 CE1 sing Y N 453 TYR CD1 HD1 sing N N 454 TYR CD2 CE2 doub Y N 455 TYR CD2 HD2 sing N N 456 TYR CE1 CZ doub Y N 457 TYR CE1 HE1 sing N N 458 TYR CE2 CZ sing Y N 459 TYR CE2 HE2 sing N N 460 TYR CZ OH sing N N 461 TYR OH HH sing N N 462 TYR OXT HXT sing N N 463 VAL N CA sing N N 464 VAL N H sing N N 465 VAL N H2 sing N N 466 VAL CA C sing N N 467 VAL CA CB sing N N 468 VAL CA HA sing N N 469 VAL C O doub N N 470 VAL C OXT sing N N 471 VAL CB CG1 sing N N 472 VAL CB CG2 sing N N 473 VAL CB HB sing N N 474 VAL CG1 HG11 sing N N 475 VAL CG1 HG12 sing N N 476 VAL CG1 HG13 sing N N 477 VAL CG2 HG21 sing N N 478 VAL CG2 HG22 sing N N 479 VAL CG2 HG23 sing N N 480 VAL OXT HXT sing N N 481 # _ndb_struct_conf_na.entry_id 7Y3K _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 C DC 16 1_555 -0.100 -0.065 -0.183 -1.809 -1.137 -7.584 1 G_DG1:DC16_H G 1 ? H 16 ? 19 1 1 B DG 2 1_555 C DC 15 1_555 -0.597 -0.061 -0.117 8.907 -6.273 4.830 2 G_DG2:DC15_H G 2 ? H 15 ? 19 1 1 B DA 3 1_555 C DT 14 1_555 -0.030 -0.106 0.565 13.312 -16.946 -5.662 3 G_DA3:DT14_H G 3 ? H 14 ? 20 1 1 B DA 4 1_555 C DT 13 1_555 0.387 -0.246 0.530 9.350 -14.359 -3.425 4 G_DA4:DT13_H G 4 ? H 13 ? 20 1 1 B DA 5 1_555 C DT 12 1_555 0.098 -0.275 0.403 8.731 -18.696 -1.023 5 G_DA5:DT12_H G 5 ? H 12 ? 20 1 1 B DT 6 1_555 C DA 11 1_555 -0.353 -0.419 0.400 -0.241 -14.007 -0.011 6 G_DT6:DA11_H G 6 ? H 11 ? 20 1 1 B DA 7 1_555 C DT 10 1_555 0.058 0.043 -0.102 -8.390 -15.303 -1.664 7 G_DA7:DT10_H G 7 ? H 10 ? 20 1 1 B DT 8 1_555 C DA 9 1_555 -0.172 -0.212 0.261 -8.583 -12.566 5.627 8 G_DT8:DA9_H G 8 ? H 9 ? 20 1 1 B DT 9 1_555 C DA 8 1_555 0.107 -0.167 -0.040 -0.822 -7.824 7.584 9 G_DT9:DA8_H G 9 ? H 8 ? 20 1 1 B DA 10 1_555 C DT 7 1_555 0.303 -0.315 -0.213 -2.424 -17.796 3.201 10 G_DA10:DT7_H G 10 ? H 7 ? 20 1 1 B DT 11 1_555 C DA 6 1_555 0.516 -0.187 -0.134 6.111 -4.598 4.377 11 G_DT11:DA6_H G 11 ? H 6 ? 20 1 1 B DA 12 1_555 C DT 5 1_555 0.015 -0.161 0.328 -4.321 -14.572 -0.387 12 G_DA12:DT5_H G 12 ? H 5 ? 20 1 1 B DT 13 1_555 C DA 4 1_555 -0.276 -0.090 0.410 -10.096 -23.978 -0.678 13 G_DT13:DA4_H G 13 ? H 4 ? 20 1 1 B DT 14 1_555 C DA 3 1_555 0.090 -0.040 0.512 -18.804 -16.215 -0.324 14 G_DT14:DA3_H G 14 ? H 3 ? 20 1 1 B DC 15 1_555 C DG 2 1_555 0.345 -0.050 0.290 -11.618 11.745 2.194 15 G_DC15:DG2_H G 15 ? H 2 ? 19 1 1 B DC 16 1_555 C DG 1 1_555 0.272 -0.074 -0.314 9.054 6.965 2.582 16 G_DC16:DG1_H G 16 ? H 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 C DC 16 1_555 B DG 2 1_555 C DC 15 1_555 0.576 0.357 3.094 0.117 6.478 27.552 -0.711 -1.153 3.097 13.369 -0.242 28.289 1 GG_DG1DG2:DC15DC16_HH G 1 ? H 16 ? G 2 ? H 15 ? 1 B DG 2 1_555 C DC 15 1_555 B DA 3 1_555 C DT 14 1_555 -1.048 0.441 3.048 -6.830 -3.264 41.621 0.930 0.787 3.132 -4.549 9.517 42.274 2 GG_DG2DA3:DT14DC15_HH G 2 ? H 15 ? G 3 ? H 14 ? 1 B DA 3 1_555 C DT 14 1_555 B DA 4 1_555 C DT 13 1_555 0.499 -0.756 3.285 1.599 -5.235 36.356 -0.468 -0.567 3.376 -8.331 -2.545 36.752 3 GG_DA3DA4:DT13DT14_HH G 3 ? H 14 ? G 4 ? H 13 ? 1 B DA 4 1_555 C DT 13 1_555 B DA 5 1_555 C DT 12 1_555 0.266 -0.488 3.168 2.742 -3.674 35.092 -0.272 -0.042 3.212 -6.062 -4.524 35.381 4 GG_DA4DA5:DT12DT13_HH G 4 ? H 13 ? G 5 ? H 12 ? 1 B DA 5 1_555 C DT 12 1_555 B DT 6 1_555 C DA 11 1_555 0.439 -0.573 3.410 0.579 -4.843 33.974 -0.170 -0.648 3.463 -8.235 -0.985 34.312 5 GG_DA5DT6:DA11DT12_HH G 5 ? H 12 ? G 6 ? H 11 ? 1 B DT 6 1_555 C DA 11 1_555 B DA 7 1_555 C DT 10 1_555 0.295 -0.055 3.449 4.061 0.555 43.300 -0.131 0.018 3.461 0.750 -5.488 43.484 6 GG_DT6DA7:DT10DA11_HH G 6 ? H 11 ? G 7 ? H 10 ? 1 B DA 7 1_555 C DT 10 1_555 B DT 8 1_555 C DA 9 1_555 0.515 -0.763 3.282 -0.856 -1.995 28.765 -1.083 -1.226 3.310 -4.008 1.719 28.845 7 GG_DA7DT8:DA9DT10_HH G 7 ? H 10 ? G 8 ? H 9 ? 1 B DT 8 1_555 C DA 9 1_555 B DT 9 1_555 C DA 8 1_555 -0.055 0.088 3.194 2.986 9.893 29.095 -1.728 0.674 3.040 18.955 -5.722 30.838 8 GG_DT8DT9:DA8DA9_HH G 8 ? H 9 ? G 9 ? H 8 ? 1 B DT 9 1_555 C DA 8 1_555 B DA 10 1_555 C DT 7 1_555 -0.415 1.170 3.505 -2.367 8.425 39.218 0.636 0.304 3.687 12.365 3.474 40.145 9 GG_DT9DA10:DT7DA8_HH G 9 ? H 8 ? G 10 ? H 7 ? 1 B DA 10 1_555 C DT 7 1_555 B DT 11 1_555 C DA 6 1_555 0.166 -0.510 3.014 -0.577 2.514 29.916 -1.456 -0.429 2.959 4.858 1.114 30.025 10 GG_DA10DT11:DA6DT7_HH G 10 ? H 7 ? G 11 ? H 6 ? 1 B DT 11 1_555 C DA 6 1_555 B DA 12 1_555 C DT 5 1_555 -0.716 0.545 3.623 -6.501 -5.209 40.890 1.378 0.243 3.598 -7.363 9.190 41.695 11 GG_DT11DA12:DT5DA6_HH G 11 ? H 6 ? G 12 ? H 5 ? 1 B DA 12 1_555 C DT 5 1_555 B DT 13 1_555 C DA 4 1_555 -0.507 -0.913 3.342 -0.786 -3.153 33.514 -1.044 0.743 3.422 -5.451 1.359 33.666 12 GG_DA12DT13:DA4DT5_HH G 12 ? H 5 ? G 13 ? H 4 ? 1 B DT 13 1_555 C DA 4 1_555 B DT 14 1_555 C DA 3 1_555 0.040 -0.183 3.457 -0.170 -3.169 40.433 0.111 -0.078 3.461 -4.576 0.246 40.553 13 GG_DT13DT14:DA3DA4_HH G 13 ? H 4 ? G 14 ? H 3 ? 1 B DT 14 1_555 C DA 3 1_555 B DC 15 1_555 C DG 2 1_555 1.137 1.240 3.549 3.367 0.417 34.142 2.030 -1.344 3.656 0.708 -5.716 34.305 14 GG_DT14DC15:DG2DA3_HH G 14 ? H 3 ? G 15 ? H 2 ? 1 B DC 15 1_555 C DG 2 1_555 B DC 16 1_555 C DG 1 1_555 -0.397 1.779 2.824 7.562 6.816 14.275 1.890 5.687 2.822 23.860 -26.470 17.518 15 GG_DC15DC16:DG1DG2_HH G 15 ? H 2 ? G 16 ? H 1 ? # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id ZN _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id ZN _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 7Y3I _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #