HEADER VIRAL PROTEIN/IMMUNE SYSTEM 11-JUN-22 7Y3N TITLE CRYSTAL STRUCTURE OF SARS-COV RECEPTOR BINDING DOMAIN IN COMPLEX WITH TITLE 2 HUMAN ANTIBODY BIOLS56 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE PROTEIN S1; COMPND 3 CHAIN: A, B, E; COMPND 4 FRAGMENT: RECEPTOR BINDING DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: HEAVY CHAIN OF BIOLS56; COMPND 8 CHAIN: H, C, F; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: LIGHT CHAIN OF BIOLS56; COMPND 12 CHAIN: L, D, G; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS; SOURCE 3 ORGANISM_COMMON: SARS-COV; SOURCE 4 ORGANISM_TAXID: 694009; SOURCE 5 GENE: S, 2; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_TAXID: 9606; SOURCE 18 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 20 EXPRESSION_SYSTEM_CELL_LINE: HEK293 KEYWDS SARS-COV, ANTIBODY, VIRAL PROTEIN, VIRAL PROTEIN-IMMUNE SYSTEM KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR X.RAO,Y.CHAI,Y.WU,F.GAO REVDAT 1 27-DEC-23 7Y3N 0 JRNL AUTH X.RAO,R.ZHAO,Z.TONG,S.GUO,W.PENG,K.LIU,S.LI,L.WU,J.TONG, JRNL AUTH 2 Y.CHAI,P.HAN,F.WANG,P.JIA,Z.LI,X.ZHAO,D.LI,R.ZHANG,X.ZHANG, JRNL AUTH 3 W.ZOU,W.LI,Q.WANG,G.F.GAO,Y.WU,L.DAI,F.GAO JRNL TITL DEFINING A DE NOVO NON-RBM ANTIBODY AS RBD-8 AND ITS JRNL TITL 2 SYNERGISTIC RESCUE OF IMMUNE-EVADED ANTIBODIES TO NEUTRALIZE JRNL TITL 3 OMICRON SARS-COV-2. JRNL REF PROC.NATL.ACAD.SCI.USA V. 120 93120 2023 JRNL REFN ESSN 1091-6490 JRNL PMID 38109549 JRNL DOI 10.1073/PNAS.2314193120 REMARK 2 REMARK 2 RESOLUTION. 2.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13-2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.39 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 63804 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 3179 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.3900 - 8.4400 0.98 2831 170 0.2070 0.2295 REMARK 3 2 8.4400 - 6.7100 1.00 2789 143 0.1995 0.2320 REMARK 3 3 6.7100 - 5.8600 1.00 2750 134 0.2049 0.2510 REMARK 3 4 5.8600 - 5.3300 1.00 2762 141 0.1827 0.2328 REMARK 3 5 5.3200 - 4.9400 1.00 2706 146 0.1691 0.2134 REMARK 3 6 4.9400 - 4.6500 1.00 2716 128 0.1673 0.2035 REMARK 3 7 4.6500 - 4.4200 1.00 2697 143 0.1769 0.1969 REMARK 3 8 4.4200 - 4.2300 1.00 2710 135 0.1775 0.2055 REMARK 3 9 4.2300 - 4.0600 0.99 2671 143 0.2003 0.2439 REMARK 3 10 4.0600 - 3.9200 0.99 2695 139 0.2165 0.2898 REMARK 3 11 3.9200 - 3.8000 0.99 2645 136 0.2362 0.2986 REMARK 3 12 3.8000 - 3.6900 0.99 2647 138 0.2394 0.2884 REMARK 3 13 3.6900 - 3.6000 0.99 2653 136 0.2485 0.2666 REMARK 3 14 3.6000 - 3.5100 0.99 2663 139 0.2467 0.2827 REMARK 3 15 3.5100 - 3.4300 0.98 2603 167 0.2612 0.3083 REMARK 3 16 3.4300 - 3.3600 0.99 2675 131 0.2640 0.2975 REMARK 3 17 3.3600 - 3.2900 0.99 2634 136 0.2660 0.3066 REMARK 3 18 3.2900 - 3.2300 0.99 2649 134 0.2858 0.3663 REMARK 3 19 3.2300 - 3.1700 0.98 2597 144 0.2915 0.3440 REMARK 3 20 3.1700 - 3.1200 0.97 2581 151 0.3067 0.3889 REMARK 3 21 3.1200 - 3.0700 0.95 2558 126 0.2996 0.3554 REMARK 3 22 3.0700 - 3.0200 0.93 2499 124 0.3170 0.4015 REMARK 3 23 3.0200 - 2.9700 0.71 1894 95 0.3157 0.3299 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.388 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.836 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 55.17 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 15000 REMARK 3 ANGLE : 0.932 20437 REMARK 3 CHIRALITY : 0.069 2272 REMARK 3 PLANARITY : 0.006 2615 REMARK 3 DIHEDRAL : 17.002 5334 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7Y3N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1300030164. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUL-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97852 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64593 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.970 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 12.50 REMARK 200 R MERGE (I) : 0.28100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.89800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6LZG, 4TSA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% V/V 2-PROPANOL, 0.1 M SODIUM REMARK 280 CITRATE TRIBASIC DIHYDRATE PH 5.9, 20% W/V POLYETHYLENE GLYCOL REMARK 280 4000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 56.24150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 87.99500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 79.50900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 87.99500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 56.24150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 79.50900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H, L, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 1 REMARK 465 VAL A 2 REMARK 465 VAL A 3 REMARK 465 PRO A 4 REMARK 465 SER A 5 REMARK 465 GLY A 6 REMARK 465 ASP A 7 REMARK 465 VAL A 8 REMARK 465 VAL A 9 REMARK 465 ARG A 10 REMARK 465 PHE A 11 REMARK 465 PRO A 12 REMARK 465 LYS A 209 REMARK 465 LEU A 210 REMARK 465 SER A 211 REMARK 465 THR A 212 REMARK 465 ASP A 213 REMARK 465 LEU A 214 REMARK 465 ILE A 215 REMARK 465 LYS A 216 REMARK 465 ASN A 217 REMARK 465 GLN A 218 REMARK 465 CYS A 219 REMARK 465 VAL A 220 REMARK 465 ASN A 221 REMARK 465 PHE A 222 REMARK 465 HIS A 223 REMARK 465 HIS A 224 REMARK 465 HIS A 225 REMARK 465 HIS A 226 REMARK 465 HIS A 227 REMARK 465 HIS A 228 REMARK 465 LYS H 140 REMARK 465 SER H 141 REMARK 465 THR H 142 REMARK 465 SER H 143 REMARK 465 ASP H 228 REMARK 465 LYS H 229 REMARK 465 THR H 230 REMARK 465 HIS H 231 REMARK 465 THR H 232 REMARK 465 CYS H 233 REMARK 465 PRO H 234 REMARK 465 PRO H 235 REMARK 465 CYS H 236 REMARK 465 PRO H 237 REMARK 465 ARG B 1 REMARK 465 VAL B 2 REMARK 465 VAL B 3 REMARK 465 PRO B 4 REMARK 465 SER B 5 REMARK 465 GLY B 6 REMARK 465 ASP B 7 REMARK 465 VAL B 8 REMARK 465 VAL B 9 REMARK 465 ARG B 10 REMARK 465 PHE B 11 REMARK 465 PRO B 12 REMARK 465 ASN B 13 REMARK 465 ILE B 14 REMARK 465 LEU B 210 REMARK 465 SER B 211 REMARK 465 THR B 212 REMARK 465 ASP B 213 REMARK 465 LEU B 214 REMARK 465 ILE B 215 REMARK 465 LYS B 216 REMARK 465 ASN B 217 REMARK 465 GLN B 218 REMARK 465 CYS B 219 REMARK 465 VAL B 220 REMARK 465 ASN B 221 REMARK 465 PHE B 222 REMARK 465 HIS B 223 REMARK 465 HIS B 224 REMARK 465 HIS B 225 REMARK 465 HIS B 226 REMARK 465 HIS B 227 REMARK 465 HIS B 228 REMARK 465 LYS C 140 REMARK 465 SER C 141 REMARK 465 THR C 142 REMARK 465 SER C 143 REMARK 465 ASP C 228 REMARK 465 LYS C 229 REMARK 465 THR C 230 REMARK 465 HIS C 231 REMARK 465 THR C 232 REMARK 465 CYS C 233 REMARK 465 PRO C 234 REMARK 465 PRO C 235 REMARK 465 CYS C 236 REMARK 465 PRO C 237 REMARK 465 SER D 215 REMARK 465 ARG E 1 REMARK 465 VAL E 2 REMARK 465 VAL E 3 REMARK 465 PRO E 4 REMARK 465 SER E 5 REMARK 465 GLY E 6 REMARK 465 ASP E 7 REMARK 465 VAL E 8 REMARK 465 VAL E 9 REMARK 465 ARG E 10 REMARK 465 PHE E 11 REMARK 465 PRO E 12 REMARK 465 ASN E 13 REMARK 465 ILE E 14 REMARK 465 THR E 15 REMARK 465 ASN E 52 REMARK 465 SER E 53 REMARK 465 THR E 54 REMARK 465 LYS E 209 REMARK 465 LEU E 210 REMARK 465 SER E 211 REMARK 465 THR E 212 REMARK 465 ASP E 213 REMARK 465 LEU E 214 REMARK 465 ILE E 215 REMARK 465 LYS E 216 REMARK 465 ASN E 217 REMARK 465 GLN E 218 REMARK 465 CYS E 219 REMARK 465 VAL E 220 REMARK 465 ASN E 221 REMARK 465 PHE E 222 REMARK 465 HIS E 223 REMARK 465 HIS E 224 REMARK 465 HIS E 225 REMARK 465 HIS E 226 REMARK 465 HIS E 227 REMARK 465 HIS E 228 REMARK 465 LYS F 140 REMARK 465 SER F 141 REMARK 465 THR F 142 REMARK 465 SER F 143 REMARK 465 SER F 226 REMARK 465 CYS F 227 REMARK 465 ASP F 228 REMARK 465 LYS F 229 REMARK 465 THR F 230 REMARK 465 HIS F 231 REMARK 465 THR F 232 REMARK 465 CYS F 233 REMARK 465 PRO F 234 REMARK 465 PRO F 235 REMARK 465 CYS F 236 REMARK 465 PRO F 237 REMARK 465 CYS G 214 REMARK 465 SER G 215 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 162 CA - CB - SG ANGL. DEV. = 8.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 54 -2.57 66.26 REMARK 500 ASP A 110 48.22 -93.59 REMARK 500 PRO A 165 34.76 -79.26 REMARK 500 LEU A 198 71.43 60.85 REMARK 500 VAL H 48 -55.26 -120.84 REMARK 500 ASP H 155 64.10 61.06 REMARK 500 SER L 30 -117.11 48.04 REMARK 500 ALA L 51 -29.04 72.04 REMARK 500 ASN L 152 -4.19 65.04 REMARK 500 TYR B 33 -10.18 83.26 REMARK 500 THR B 54 -9.37 71.51 REMARK 500 ASP B 110 48.92 -91.16 REMARK 500 THR B 128 -165.27 -78.98 REMARK 500 PRO B 157 24.91 -71.93 REMARK 500 ASP B 158 37.86 -147.82 REMARK 500 LYS B 160 115.15 66.60 REMARK 500 LEU C 18 144.29 -172.90 REMARK 500 THR C 88 -10.00 -54.13 REMARK 500 ASP C 155 61.58 63.26 REMARK 500 SER D 30 -133.85 44.51 REMARK 500 LEU D 47 -71.66 -121.21 REMARK 500 VAL D 50 60.87 -150.90 REMARK 500 ALA D 51 -14.01 68.16 REMARK 500 SER D 52 0.87 -156.70 REMARK 500 ALA D 84 -168.60 -162.30 REMARK 500 ASN D 152 -4.34 68.23 REMARK 500 TYR E 33 -13.36 83.52 REMARK 500 ASN E 42 61.51 60.81 REMARK 500 ALA E 93 149.93 -173.97 REMARK 500 ASP E 110 47.92 -89.50 REMARK 500 ASN E 122 -56.19 -18.80 REMARK 500 PRO E 165 47.75 -97.93 REMARK 500 ASN E 168 54.86 38.99 REMARK 500 LEU E 198 69.57 60.87 REMARK 500 ASP F 155 67.28 60.06 REMARK 500 SER G 30 -121.14 48.59 REMARK 500 ALA G 51 -31.32 68.58 REMARK 500 SER G 52 -6.45 -142.49 REMARK 500 LYS G 169 -68.60 -105.85 REMARK 500 REMARK 500 REMARK: NULL DBREF 7Y3N A 1 222 UNP P59594 SPIKE_SARS 306 527 DBREF 7Y3N H 1 237 PDB 7Y3N 7Y3N 1 237 DBREF 7Y3N L 1 215 PDB 7Y3N 7Y3N 1 215 DBREF 7Y3N B 1 222 UNP P59594 SPIKE_SARS 306 527 DBREF 7Y3N C 1 237 PDB 7Y3N 7Y3N 1 237 DBREF 7Y3N D 1 215 PDB 7Y3N 7Y3N 1 215 DBREF 7Y3N E 1 222 UNP P59594 SPIKE_SARS 306 527 DBREF 7Y3N F 1 237 PDB 7Y3N 7Y3N 1 237 DBREF 7Y3N G 1 215 PDB 7Y3N 7Y3N 1 215 SEQADV 7Y3N HIS A 223 UNP P59594 EXPRESSION TAG SEQADV 7Y3N HIS A 224 UNP P59594 EXPRESSION TAG SEQADV 7Y3N HIS A 225 UNP P59594 EXPRESSION TAG SEQADV 7Y3N HIS A 226 UNP P59594 EXPRESSION TAG SEQADV 7Y3N HIS A 227 UNP P59594 EXPRESSION TAG SEQADV 7Y3N HIS A 228 UNP P59594 EXPRESSION TAG SEQADV 7Y3N HIS B 223 UNP P59594 EXPRESSION TAG SEQADV 7Y3N HIS B 224 UNP P59594 EXPRESSION TAG SEQADV 7Y3N HIS B 225 UNP P59594 EXPRESSION TAG SEQADV 7Y3N HIS B 226 UNP P59594 EXPRESSION TAG SEQADV 7Y3N HIS B 227 UNP P59594 EXPRESSION TAG SEQADV 7Y3N HIS B 228 UNP P59594 EXPRESSION TAG SEQADV 7Y3N HIS E 223 UNP P59594 EXPRESSION TAG SEQADV 7Y3N HIS E 224 UNP P59594 EXPRESSION TAG SEQADV 7Y3N HIS E 225 UNP P59594 EXPRESSION TAG SEQADV 7Y3N HIS E 226 UNP P59594 EXPRESSION TAG SEQADV 7Y3N HIS E 227 UNP P59594 EXPRESSION TAG SEQADV 7Y3N HIS E 228 UNP P59594 EXPRESSION TAG SEQRES 1 A 228 ARG VAL VAL PRO SER GLY ASP VAL VAL ARG PHE PRO ASN SEQRES 2 A 228 ILE THR ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN ALA SEQRES 3 A 228 THR LYS PHE PRO SER VAL TYR ALA TRP GLU ARG LYS LYS SEQRES 4 A 228 ILE SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN SEQRES 5 A 228 SER THR PHE PHE SER THR PHE LYS CYS TYR GLY VAL SER SEQRES 6 A 228 ALA THR LYS LEU ASN ASP LEU CYS PHE SER ASN VAL TYR SEQRES 7 A 228 ALA ASP SER PHE VAL VAL LYS GLY ASP ASP VAL ARG GLN SEQRES 8 A 228 ILE ALA PRO GLY GLN THR GLY VAL ILE ALA ASP TYR ASN SEQRES 9 A 228 TYR LYS LEU PRO ASP ASP PHE MET GLY CYS VAL LEU ALA SEQRES 10 A 228 TRP ASN THR ARG ASN ILE ASP ALA THR SER THR GLY ASN SEQRES 11 A 228 TYR ASN TYR LYS TYR ARG TYR LEU ARG HIS GLY LYS LEU SEQRES 12 A 228 ARG PRO PHE GLU ARG ASP ILE SER ASN VAL PRO PHE SER SEQRES 13 A 228 PRO ASP GLY LYS PRO CYS THR PRO PRO ALA LEU ASN CYS SEQRES 14 A 228 TYR TRP PRO LEU ASN ASP TYR GLY PHE TYR THR THR THR SEQRES 15 A 228 GLY ILE GLY TYR GLN PRO TYR ARG VAL VAL VAL LEU SER SEQRES 16 A 228 PHE GLU LEU LEU ASN ALA PRO ALA THR VAL CYS GLY PRO SEQRES 17 A 228 LYS LEU SER THR ASP LEU ILE LYS ASN GLN CYS VAL ASN SEQRES 18 A 228 PHE HIS HIS HIS HIS HIS HIS SEQRES 1 H 237 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY VAL VAL GLN SEQRES 2 H 237 PRO GLY GLY SER LEU ARG LEU SER CYS ALA VAL SER GLY SEQRES 3 H 237 PHE THR PHE ASP ASP TYR ALA MET HIS TRP VAL ARG GLN SEQRES 4 H 237 ALA PRO GLY LYS GLY LEU ASP TRP VAL SER LEU ILE SER SEQRES 5 H 237 GLY ASP GLY SER TYR THR TYR TYR ALA ASP SER VAL LYS SEQRES 6 H 237 GLY ARG PHE THR ILE SER ARG ASP SER SER LYS ASN SER SEQRES 7 H 237 LEU TYR LEU GLN MET ASN SER LEU ARG THR GLU ASP THR SEQRES 8 H 237 ALA LEU TYR TYR CYS ALA LYS ALA GLN THR PRO THR LEU SEQRES 9 H 237 TRP TRP LEU GLN ASP ALA PHE ASP ILE TRP GLY GLN GLY SEQRES 10 H 237 THR MET VAL THR VAL SER SER ALA SER THR LYS GLY PRO SEQRES 11 H 237 SER VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SER SEQRES 12 H 237 GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR SEQRES 13 H 237 PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA SEQRES 14 H 237 LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SEQRES 15 H 237 SER SER GLY LEU TYR SER LEU SER SER VAL VAL THR VAL SEQRES 16 H 237 PRO SER SER SER LEU GLY THR GLN THR TYR ILE CYS ASN SEQRES 17 H 237 VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS ARG SEQRES 18 H 237 VAL GLU PRO LYS SER CYS ASP LYS THR HIS THR CYS PRO SEQRES 19 H 237 PRO CYS PRO SEQRES 1 L 215 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 L 215 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 L 215 GLN SER ILE SER ASN TYR LEU ASN TRP TYR GLN GLN LYS SEQRES 4 L 215 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR VAL ALA SER SEQRES 5 L 215 SER LEU GLN SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 215 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 215 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN SER SEQRES 8 L 215 TYR SER THR PRO PHE THR PHE GLY PRO GLY THR LYS VAL SEQRES 9 L 215 ASP ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 L 215 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 L 215 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 L 215 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 L 215 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 L 215 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 L 215 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 L 215 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 L 215 PHE ASN ARG GLY GLU CYS SER SEQRES 1 B 228 ARG VAL VAL PRO SER GLY ASP VAL VAL ARG PHE PRO ASN SEQRES 2 B 228 ILE THR ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN ALA SEQRES 3 B 228 THR LYS PHE PRO SER VAL TYR ALA TRP GLU ARG LYS LYS SEQRES 4 B 228 ILE SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN SEQRES 5 B 228 SER THR PHE PHE SER THR PHE LYS CYS TYR GLY VAL SER SEQRES 6 B 228 ALA THR LYS LEU ASN ASP LEU CYS PHE SER ASN VAL TYR SEQRES 7 B 228 ALA ASP SER PHE VAL VAL LYS GLY ASP ASP VAL ARG GLN SEQRES 8 B 228 ILE ALA PRO GLY GLN THR GLY VAL ILE ALA ASP TYR ASN SEQRES 9 B 228 TYR LYS LEU PRO ASP ASP PHE MET GLY CYS VAL LEU ALA SEQRES 10 B 228 TRP ASN THR ARG ASN ILE ASP ALA THR SER THR GLY ASN SEQRES 11 B 228 TYR ASN TYR LYS TYR ARG TYR LEU ARG HIS GLY LYS LEU SEQRES 12 B 228 ARG PRO PHE GLU ARG ASP ILE SER ASN VAL PRO PHE SER SEQRES 13 B 228 PRO ASP GLY LYS PRO CYS THR PRO PRO ALA LEU ASN CYS SEQRES 14 B 228 TYR TRP PRO LEU ASN ASP TYR GLY PHE TYR THR THR THR SEQRES 15 B 228 GLY ILE GLY TYR GLN PRO TYR ARG VAL VAL VAL LEU SER SEQRES 16 B 228 PHE GLU LEU LEU ASN ALA PRO ALA THR VAL CYS GLY PRO SEQRES 17 B 228 LYS LEU SER THR ASP LEU ILE LYS ASN GLN CYS VAL ASN SEQRES 18 B 228 PHE HIS HIS HIS HIS HIS HIS SEQRES 1 C 237 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY VAL VAL GLN SEQRES 2 C 237 PRO GLY GLY SER LEU ARG LEU SER CYS ALA VAL SER GLY SEQRES 3 C 237 PHE THR PHE ASP ASP TYR ALA MET HIS TRP VAL ARG GLN SEQRES 4 C 237 ALA PRO GLY LYS GLY LEU ASP TRP VAL SER LEU ILE SER SEQRES 5 C 237 GLY ASP GLY SER TYR THR TYR TYR ALA ASP SER VAL LYS SEQRES 6 C 237 GLY ARG PHE THR ILE SER ARG ASP SER SER LYS ASN SER SEQRES 7 C 237 LEU TYR LEU GLN MET ASN SER LEU ARG THR GLU ASP THR SEQRES 8 C 237 ALA LEU TYR TYR CYS ALA LYS ALA GLN THR PRO THR LEU SEQRES 9 C 237 TRP TRP LEU GLN ASP ALA PHE ASP ILE TRP GLY GLN GLY SEQRES 10 C 237 THR MET VAL THR VAL SER SER ALA SER THR LYS GLY PRO SEQRES 11 C 237 SER VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SER SEQRES 12 C 237 GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR SEQRES 13 C 237 PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA SEQRES 14 C 237 LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SEQRES 15 C 237 SER SER GLY LEU TYR SER LEU SER SER VAL VAL THR VAL SEQRES 16 C 237 PRO SER SER SER LEU GLY THR GLN THR TYR ILE CYS ASN SEQRES 17 C 237 VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS ARG SEQRES 18 C 237 VAL GLU PRO LYS SER CYS ASP LYS THR HIS THR CYS PRO SEQRES 19 C 237 PRO CYS PRO SEQRES 1 D 215 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 D 215 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 D 215 GLN SER ILE SER ASN TYR LEU ASN TRP TYR GLN GLN LYS SEQRES 4 D 215 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR VAL ALA SER SEQRES 5 D 215 SER LEU GLN SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 D 215 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 D 215 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN SER SEQRES 8 D 215 TYR SER THR PRO PHE THR PHE GLY PRO GLY THR LYS VAL SEQRES 9 D 215 ASP ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 D 215 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 D 215 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 D 215 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 D 215 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 D 215 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 D 215 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 D 215 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 D 215 PHE ASN ARG GLY GLU CYS SER SEQRES 1 E 228 ARG VAL VAL PRO SER GLY ASP VAL VAL ARG PHE PRO ASN SEQRES 2 E 228 ILE THR ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN ALA SEQRES 3 E 228 THR LYS PHE PRO SER VAL TYR ALA TRP GLU ARG LYS LYS SEQRES 4 E 228 ILE SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN SEQRES 5 E 228 SER THR PHE PHE SER THR PHE LYS CYS TYR GLY VAL SER SEQRES 6 E 228 ALA THR LYS LEU ASN ASP LEU CYS PHE SER ASN VAL TYR SEQRES 7 E 228 ALA ASP SER PHE VAL VAL LYS GLY ASP ASP VAL ARG GLN SEQRES 8 E 228 ILE ALA PRO GLY GLN THR GLY VAL ILE ALA ASP TYR ASN SEQRES 9 E 228 TYR LYS LEU PRO ASP ASP PHE MET GLY CYS VAL LEU ALA SEQRES 10 E 228 TRP ASN THR ARG ASN ILE ASP ALA THR SER THR GLY ASN SEQRES 11 E 228 TYR ASN TYR LYS TYR ARG TYR LEU ARG HIS GLY LYS LEU SEQRES 12 E 228 ARG PRO PHE GLU ARG ASP ILE SER ASN VAL PRO PHE SER SEQRES 13 E 228 PRO ASP GLY LYS PRO CYS THR PRO PRO ALA LEU ASN CYS SEQRES 14 E 228 TYR TRP PRO LEU ASN ASP TYR GLY PHE TYR THR THR THR SEQRES 15 E 228 GLY ILE GLY TYR GLN PRO TYR ARG VAL VAL VAL LEU SER SEQRES 16 E 228 PHE GLU LEU LEU ASN ALA PRO ALA THR VAL CYS GLY PRO SEQRES 17 E 228 LYS LEU SER THR ASP LEU ILE LYS ASN GLN CYS VAL ASN SEQRES 18 E 228 PHE HIS HIS HIS HIS HIS HIS SEQRES 1 F 237 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY VAL VAL GLN SEQRES 2 F 237 PRO GLY GLY SER LEU ARG LEU SER CYS ALA VAL SER GLY SEQRES 3 F 237 PHE THR PHE ASP ASP TYR ALA MET HIS TRP VAL ARG GLN SEQRES 4 F 237 ALA PRO GLY LYS GLY LEU ASP TRP VAL SER LEU ILE SER SEQRES 5 F 237 GLY ASP GLY SER TYR THR TYR TYR ALA ASP SER VAL LYS SEQRES 6 F 237 GLY ARG PHE THR ILE SER ARG ASP SER SER LYS ASN SER SEQRES 7 F 237 LEU TYR LEU GLN MET ASN SER LEU ARG THR GLU ASP THR SEQRES 8 F 237 ALA LEU TYR TYR CYS ALA LYS ALA GLN THR PRO THR LEU SEQRES 9 F 237 TRP TRP LEU GLN ASP ALA PHE ASP ILE TRP GLY GLN GLY SEQRES 10 F 237 THR MET VAL THR VAL SER SER ALA SER THR LYS GLY PRO SEQRES 11 F 237 SER VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SER SEQRES 12 F 237 GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR SEQRES 13 F 237 PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA SEQRES 14 F 237 LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SEQRES 15 F 237 SER SER GLY LEU TYR SER LEU SER SER VAL VAL THR VAL SEQRES 16 F 237 PRO SER SER SER LEU GLY THR GLN THR TYR ILE CYS ASN SEQRES 17 F 237 VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS ARG SEQRES 18 F 237 VAL GLU PRO LYS SER CYS ASP LYS THR HIS THR CYS PRO SEQRES 19 F 237 PRO CYS PRO SEQRES 1 G 215 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 G 215 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 G 215 GLN SER ILE SER ASN TYR LEU ASN TRP TYR GLN GLN LYS SEQRES 4 G 215 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR VAL ALA SER SEQRES 5 G 215 SER LEU GLN SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 G 215 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 G 215 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN SER SEQRES 8 G 215 TYR SER THR PRO PHE THR PHE GLY PRO GLY THR LYS VAL SEQRES 9 G 215 ASP ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 G 215 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 G 215 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 G 215 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 G 215 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 G 215 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 G 215 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 G 215 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 G 215 PHE ASN ARG GLY GLU CYS SER HET NAG I 1 14 HET NAG I 2 14 HET FUC I 3 10 HET NAG B 301 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 10 NAG 3(C8 H15 N O6) FORMUL 10 FUC C6 H12 O5 HELIX 1 AA1 PRO A 19 ASN A 25 1 7 HELIX 2 AA2 TYR A 47 TYR A 51 5 5 HELIX 3 AA3 SER A 65 LEU A 69 5 5 HELIX 4 AA4 ASP A 87 ILE A 92 5 6 HELIX 5 AA5 GLY A 98 ASN A 104 1 7 HELIX 6 AA6 THR A 120 ALA A 125 1 6 HELIX 7 AA7 THR H 28 TYR H 32 5 5 HELIX 8 AA8 ARG H 87 THR H 91 5 5 HELIX 9 AA9 SER H 167 ALA H 169 5 3 HELIX 10 AB1 GLN L 79 PHE L 83 5 5 HELIX 11 AB2 SER L 121 GLY L 128 1 8 HELIX 12 AB3 LYS L 183 LYS L 188 1 6 HELIX 13 AB4 PRO B 19 ASN B 25 1 7 HELIX 14 AB5 SER B 65 ASP B 71 5 7 HELIX 15 AB6 ASP B 87 ILE B 92 5 6 HELIX 16 AB7 GLY B 98 ASN B 104 1 7 HELIX 17 AB8 THR B 120 ALA B 125 1 6 HELIX 18 AB9 GLY B 183 TYR B 186 5 4 HELIX 19 AC1 THR C 28 TYR C 32 5 5 HELIX 20 AC2 ARG C 87 THR C 91 5 5 HELIX 21 AC3 SER C 167 ALA C 169 5 3 HELIX 22 AC4 SER C 198 LEU C 200 5 3 HELIX 23 AC5 LYS C 212 ASN C 215 5 4 HELIX 24 AC6 GLN D 79 PHE D 83 5 5 HELIX 25 AC7 SER D 121 GLY D 128 1 8 HELIX 26 AC8 LYS D 183 LYS D 188 1 6 HELIX 27 AC9 PRO E 19 ASN E 25 1 7 HELIX 28 AD1 ASP E 46 TYR E 51 5 6 HELIX 29 AD2 SER E 65 ASP E 71 5 7 HELIX 30 AD3 ASP E 87 ILE E 92 5 6 HELIX 31 AD4 GLY E 98 ASN E 104 1 7 HELIX 32 AD5 THR E 120 ALA E 125 1 6 HELIX 33 AD6 THR F 28 TYR F 32 5 5 HELIX 34 AD7 ARG F 87 THR F 91 5 5 HELIX 35 AD8 SER F 167 ALA F 169 5 3 HELIX 36 AD9 LYS F 212 ASN F 215 5 4 HELIX 37 AE1 GLN G 79 PHE G 83 5 5 HELIX 38 AE2 SER G 121 GLY G 128 1 8 HELIX 39 AE3 LYS G 183 LYS G 188 1 6 SHEET 1 AA1 5 GLU A 36 ILE A 40 0 SHEET 2 AA1 5 VAL A 77 LYS A 85 -1 O VAL A 77 N ILE A 40 SHEET 3 AA1 5 PRO A 188 PHE A 196 -1 O SER A 195 N TYR A 78 SHEET 4 AA1 5 GLY A 113 ASN A 119 -1 N CYS A 114 O LEU A 194 SHEET 5 AA1 5 THR A 58 TYR A 62 -1 N TYR A 62 O GLY A 113 SHEET 1 AA2 3 CYS A 43 VAL A 44 0 SHEET 2 AA2 3 VAL A 205 CYS A 206 1 O CYS A 206 N CYS A 43 SHEET 3 AA2 3 CYS A 73 PHE A 74 -1 N PHE A 74 O VAL A 205 SHEET 1 AA3 2 LYS A 134 ARG A 136 0 SHEET 2 AA3 2 LEU A 173 ASP A 175 -1 O ASN A 174 N TYR A 135 SHEET 1 AA4 4 GLN H 3 SER H 7 0 SHEET 2 AA4 4 LEU H 18 SER H 25 -1 O SER H 21 N SER H 7 SHEET 3 AA4 4 SER H 78 MET H 83 -1 O MET H 83 N LEU H 18 SHEET 4 AA4 4 PHE H 68 ASP H 73 -1 N SER H 71 O TYR H 80 SHEET 1 AA5 6 VAL H 11 VAL H 12 0 SHEET 2 AA5 6 THR H 118 VAL H 122 1 O THR H 121 N VAL H 12 SHEET 3 AA5 6 ALA H 92 ALA H 99 -1 N TYR H 94 O THR H 118 SHEET 4 AA5 6 MET H 34 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 AA5 6 ASP H 46 ILE H 51 -1 O ASP H 46 N ARG H 38 SHEET 6 AA5 6 THR H 58 TYR H 60 -1 O TYR H 59 N LEU H 50 SHEET 1 AA6 4 VAL H 11 VAL H 12 0 SHEET 2 AA6 4 THR H 118 VAL H 122 1 O THR H 121 N VAL H 12 SHEET 3 AA6 4 ALA H 92 ALA H 99 -1 N TYR H 94 O THR H 118 SHEET 4 AA6 4 PHE H 111 TRP H 114 -1 O ILE H 113 N LYS H 98 SHEET 1 AA7 4 SER H 131 LEU H 135 0 SHEET 2 AA7 4 THR H 146 TYR H 156 -1 O GLY H 150 N LEU H 135 SHEET 3 AA7 4 TYR H 187 PRO H 196 -1 O LEU H 189 N VAL H 153 SHEET 4 AA7 4 VAL H 174 THR H 176 -1 N HIS H 175 O VAL H 192 SHEET 1 AA8 4 SER H 131 LEU H 135 0 SHEET 2 AA8 4 THR H 146 TYR H 156 -1 O GLY H 150 N LEU H 135 SHEET 3 AA8 4 TYR H 187 PRO H 196 -1 O LEU H 189 N VAL H 153 SHEET 4 AA8 4 VAL H 180 LEU H 181 -1 N VAL H 180 O SER H 188 SHEET 1 AA9 3 THR H 162 TRP H 165 0 SHEET 2 AA9 3 ILE H 206 HIS H 211 -1 O ASN H 208 N SER H 164 SHEET 3 AA9 3 THR H 216 ARG H 221 -1 O VAL H 218 N VAL H 209 SHEET 1 AB1 4 MET L 4 SER L 7 0 SHEET 2 AB1 4 VAL L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AB1 4 ASP L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 4 AB1 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AB2 5 SER L 10 ALA L 13 0 SHEET 2 AB2 5 THR L 102 ILE L 106 1 O ASP L 105 N LEU L 11 SHEET 3 AB2 5 THR L 85 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AB2 5 LEU L 33 GLN L 38 -1 N TYR L 36 O TYR L 87 SHEET 5 AB2 5 LYS L 45 ILE L 48 -1 O LYS L 45 N GLN L 37 SHEET 1 AB3 4 SER L 10 ALA L 13 0 SHEET 2 AB3 4 THR L 102 ILE L 106 1 O ASP L 105 N LEU L 11 SHEET 3 AB3 4 THR L 85 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AB3 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 AB4 4 SER L 114 PHE L 118 0 SHEET 2 AB4 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 AB4 4 TYR L 173 SER L 182 -1 O LEU L 175 N LEU L 136 SHEET 4 AB4 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 AB5 4 ALA L 153 LEU L 154 0 SHEET 2 AB5 4 ALA L 144 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 AB5 4 VAL L 191 HIS L 198 -1 O GLU L 195 N GLN L 147 SHEET 4 AB5 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SHEET 1 AB6 5 GLU B 36 ILE B 40 0 SHEET 2 AB6 5 ASN B 76 LYS B 85 -1 O ALA B 79 N LYS B 38 SHEET 3 AB6 5 PRO B 188 GLU B 197 -1 O SER B 195 N TYR B 78 SHEET 4 AB6 5 GLY B 113 ASN B 119 -1 N LEU B 116 O VAL B 192 SHEET 5 AB6 5 THR B 58 TYR B 62 -1 N TYR B 62 O GLY B 113 SHEET 1 AB7 3 CYS B 43 VAL B 44 0 SHEET 2 AB7 3 VAL B 205 CYS B 206 1 O CYS B 206 N CYS B 43 SHEET 3 AB7 3 CYS B 73 PHE B 74 -1 N PHE B 74 O VAL B 205 SHEET 1 AB8 2 ASN B 130 ARG B 136 0 SHEET 2 AB8 2 LEU B 173 PHE B 178 -1 O TYR B 176 N TYR B 133 SHEET 1 AB9 4 GLN C 3 SER C 7 0 SHEET 2 AB9 4 LEU C 18 SER C 25 -1 O SER C 21 N SER C 7 SHEET 3 AB9 4 SER C 78 MET C 83 -1 O MET C 83 N LEU C 18 SHEET 4 AB9 4 PHE C 68 ASP C 73 -1 N THR C 69 O GLN C 82 SHEET 1 AC1 6 VAL C 11 VAL C 12 0 SHEET 2 AC1 6 THR C 118 VAL C 122 1 O THR C 121 N VAL C 12 SHEET 3 AC1 6 ALA C 92 ALA C 99 -1 N TYR C 94 O THR C 118 SHEET 4 AC1 6 MET C 34 GLN C 39 -1 N VAL C 37 O TYR C 95 SHEET 5 AC1 6 LEU C 45 ILE C 51 -1 O VAL C 48 N TRP C 36 SHEET 6 AC1 6 THR C 58 TYR C 60 -1 O TYR C 59 N LEU C 50 SHEET 1 AC2 4 VAL C 11 VAL C 12 0 SHEET 2 AC2 4 THR C 118 VAL C 122 1 O THR C 121 N VAL C 12 SHEET 3 AC2 4 ALA C 92 ALA C 99 -1 N TYR C 94 O THR C 118 SHEET 4 AC2 4 PHE C 111 TRP C 114 -1 O ILE C 113 N LYS C 98 SHEET 1 AC3 4 SER C 131 LEU C 135 0 SHEET 2 AC3 4 THR C 146 TYR C 156 -1 O GLY C 150 N LEU C 135 SHEET 3 AC3 4 TYR C 187 PRO C 196 -1 O TYR C 187 N TYR C 156 SHEET 4 AC3 4 VAL C 174 THR C 176 -1 N HIS C 175 O VAL C 192 SHEET 1 AC4 4 SER C 131 LEU C 135 0 SHEET 2 AC4 4 THR C 146 TYR C 156 -1 O GLY C 150 N LEU C 135 SHEET 3 AC4 4 TYR C 187 PRO C 196 -1 O TYR C 187 N TYR C 156 SHEET 4 AC4 4 VAL C 180 LEU C 181 -1 N VAL C 180 O SER C 188 SHEET 1 AC5 3 THR C 162 TRP C 165 0 SHEET 2 AC5 3 TYR C 205 HIS C 211 -1 O ASN C 208 N SER C 164 SHEET 3 AC5 3 THR C 216 VAL C 222 -1 O VAL C 218 N VAL C 209 SHEET 1 AC6 4 MET D 4 SER D 7 0 SHEET 2 AC6 4 VAL D 19 ALA D 25 -1 O ARG D 24 N THR D 5 SHEET 3 AC6 4 ASP D 70 ILE D 75 -1 O PHE D 71 N CYS D 23 SHEET 4 AC6 4 PHE D 62 SER D 65 -1 N SER D 63 O THR D 74 SHEET 1 AC7 5 SER D 10 ALA D 13 0 SHEET 2 AC7 5 THR D 102 ILE D 106 1 O LYS D 103 N LEU D 11 SHEET 3 AC7 5 THR D 85 GLN D 90 -1 N TYR D 86 O THR D 102 SHEET 4 AC7 5 LEU D 33 GLN D 38 -1 N ASN D 34 O GLN D 89 SHEET 5 AC7 5 LYS D 45 ILE D 48 -1 O LYS D 45 N GLN D 37 SHEET 1 AC8 4 SER D 10 ALA D 13 0 SHEET 2 AC8 4 THR D 102 ILE D 106 1 O LYS D 103 N LEU D 11 SHEET 3 AC8 4 THR D 85 GLN D 90 -1 N TYR D 86 O THR D 102 SHEET 4 AC8 4 THR D 97 PHE D 98 -1 O THR D 97 N GLN D 90 SHEET 1 AC9 4 SER D 114 PHE D 118 0 SHEET 2 AC9 4 THR D 129 PHE D 139 -1 O LEU D 135 N PHE D 116 SHEET 3 AC9 4 TYR D 173 SER D 182 -1 O LEU D 179 N VAL D 132 SHEET 4 AC9 4 SER D 159 VAL D 163 -1 N SER D 162 O SER D 176 SHEET 1 AD1 4 ALA D 153 LEU D 154 0 SHEET 2 AD1 4 ALA D 144 VAL D 150 -1 N VAL D 150 O ALA D 153 SHEET 3 AD1 4 VAL D 191 HIS D 198 -1 O ALA D 193 N LYS D 149 SHEET 4 AD1 4 VAL D 205 ASN D 210 -1 O LYS D 207 N CYS D 194 SHEET 1 AD2 5 GLU E 36 ILE E 40 0 SHEET 2 AD2 5 VAL E 77 LYS E 85 -1 O VAL E 77 N ILE E 40 SHEET 3 AD2 5 PRO E 188 PHE E 196 -1 O VAL E 191 N PHE E 82 SHEET 4 AD2 5 GLY E 113 ASN E 119 -1 N LEU E 116 O VAL E 192 SHEET 5 AD2 5 THR E 58 TYR E 62 -1 N TYR E 62 O GLY E 113 SHEET 1 AD3 2 CYS E 73 PHE E 74 0 SHEET 2 AD3 2 VAL E 205 CYS E 206 -1 O VAL E 205 N PHE E 74 SHEET 1 AD4 2 LYS E 134 ARG E 136 0 SHEET 2 AD4 2 LEU E 173 ASP E 175 -1 O ASN E 174 N TYR E 135 SHEET 1 AD5 4 GLN F 3 SER F 7 0 SHEET 2 AD5 4 LEU F 18 SER F 25 -1 O SER F 25 N GLN F 3 SHEET 3 AD5 4 SER F 78 MET F 83 -1 O MET F 83 N LEU F 18 SHEET 4 AD5 4 PHE F 68 ASP F 73 -1 N SER F 71 O TYR F 80 SHEET 1 AD6 6 VAL F 11 VAL F 12 0 SHEET 2 AD6 6 THR F 118 VAL F 122 1 O THR F 121 N VAL F 12 SHEET 3 AD6 6 ALA F 92 ALA F 99 -1 N TYR F 94 O THR F 118 SHEET 4 AD6 6 MET F 34 GLN F 39 -1 N VAL F 37 O TYR F 95 SHEET 5 AD6 6 LEU F 45 ILE F 51 -1 O ASP F 46 N ARG F 38 SHEET 6 AD6 6 THR F 58 TYR F 60 -1 O TYR F 59 N LEU F 50 SHEET 1 AD7 4 VAL F 11 VAL F 12 0 SHEET 2 AD7 4 THR F 118 VAL F 122 1 O THR F 121 N VAL F 12 SHEET 3 AD7 4 ALA F 92 ALA F 99 -1 N TYR F 94 O THR F 118 SHEET 4 AD7 4 PHE F 111 TRP F 114 -1 O ILE F 113 N LYS F 98 SHEET 1 AD8 4 SER F 131 LEU F 135 0 SHEET 2 AD8 4 THR F 146 TYR F 156 -1 O GLY F 150 N LEU F 135 SHEET 3 AD8 4 TYR F 187 PRO F 196 -1 O TYR F 187 N TYR F 156 SHEET 4 AD8 4 VAL F 174 THR F 176 -1 N HIS F 175 O VAL F 192 SHEET 1 AD9 4 SER F 131 LEU F 135 0 SHEET 2 AD9 4 THR F 146 TYR F 156 -1 O GLY F 150 N LEU F 135 SHEET 3 AD9 4 TYR F 187 PRO F 196 -1 O TYR F 187 N TYR F 156 SHEET 4 AD9 4 VAL F 180 LEU F 181 -1 N VAL F 180 O SER F 188 SHEET 1 AE1 3 THR F 162 TRP F 165 0 SHEET 2 AE1 3 TYR F 205 HIS F 211 -1 O ASN F 208 N SER F 164 SHEET 3 AE1 3 THR F 216 VAL F 222 -1 O VAL F 218 N VAL F 209 SHEET 1 AE2 4 MET G 4 SER G 7 0 SHEET 2 AE2 4 VAL G 19 ALA G 25 -1 O ARG G 24 N THR G 5 SHEET 3 AE2 4 ASP G 70 ILE G 75 -1 O LEU G 73 N ILE G 21 SHEET 4 AE2 4 PHE G 62 SER G 67 -1 N SER G 63 O THR G 74 SHEET 1 AE3 5 SER G 10 ALA G 13 0 SHEET 2 AE3 5 THR G 102 ILE G 106 1 O ASP G 105 N LEU G 11 SHEET 3 AE3 5 THR G 85 GLN G 90 -1 N TYR G 86 O THR G 102 SHEET 4 AE3 5 LEU G 33 GLN G 38 -1 N ASN G 34 O GLN G 89 SHEET 5 AE3 5 LYS G 45 ILE G 48 -1 O LYS G 45 N GLN G 37 SHEET 1 AE4 4 SER G 114 PHE G 118 0 SHEET 2 AE4 4 THR G 129 PHE G 139 -1 O LEU G 135 N PHE G 116 SHEET 3 AE4 4 TYR G 173 SER G 182 -1 O LEU G 181 N ALA G 130 SHEET 4 AE4 4 SER G 159 VAL G 163 -1 N SER G 162 O SER G 176 SHEET 1 AE5 4 ALA G 153 LEU G 154 0 SHEET 2 AE5 4 ALA G 144 VAL G 150 -1 N VAL G 150 O ALA G 153 SHEET 3 AE5 4 VAL G 191 HIS G 198 -1 O GLU G 195 N GLN G 147 SHEET 4 AE5 4 VAL G 205 ASN G 210 -1 O VAL G 205 N VAL G 196 SSBOND 1 CYS A 18 CYS A 43 1555 1555 2.01 SSBOND 2 CYS A 61 CYS A 114 1555 1555 2.04 SSBOND 3 CYS A 73 CYS A 206 1555 1555 2.03 SSBOND 4 CYS A 162 CYS A 169 1555 1555 2.02 SSBOND 5 CYS H 22 CYS H 96 1555 1555 2.04 SSBOND 6 CYS H 151 CYS H 207 1555 1555 2.04 SSBOND 7 CYS H 227 CYS L 214 1555 1555 2.03 SSBOND 8 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 9 CYS L 134 CYS L 194 1555 1555 2.03 SSBOND 10 CYS B 18 CYS B 43 1555 1555 2.01 SSBOND 11 CYS B 61 CYS B 114 1555 1555 2.03 SSBOND 12 CYS B 73 CYS B 206 1555 1555 2.03 SSBOND 13 CYS B 162 CYS B 169 1555 1555 2.25 SSBOND 14 CYS C 22 CYS C 96 1555 1555 2.04 SSBOND 15 CYS C 151 CYS C 207 1555 1555 2.03 SSBOND 16 CYS C 227 CYS D 214 1555 1555 2.03 SSBOND 17 CYS D 23 CYS D 88 1555 1555 2.01 SSBOND 18 CYS D 134 CYS D 194 1555 1555 2.03 SSBOND 19 CYS E 18 CYS E 43 1555 1555 2.01 SSBOND 20 CYS E 61 CYS E 114 1555 1555 2.03 SSBOND 21 CYS E 73 CYS E 206 1555 1555 2.03 SSBOND 22 CYS E 162 CYS E 169 1555 1555 2.02 SSBOND 23 CYS F 22 CYS F 96 1555 1555 2.04 SSBOND 24 CYS F 151 CYS F 207 1555 1555 2.03 SSBOND 25 CYS G 23 CYS G 88 1555 1555 2.04 SSBOND 26 CYS G 134 CYS G 194 1555 1555 2.03 LINK ND2 ASN A 52 C1 NAG I 1 1555 1555 1.44 LINK ND2 ASN B 52 C1 NAG B 301 1555 1555 1.45 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.46 LINK O6 NAG I 1 C1 FUC I 3 1555 1555 1.45 CISPEP 1 PRO A 164 PRO A 165 0 7.15 CISPEP 2 PHE H 157 PRO H 158 0 -3.51 CISPEP 3 GLU H 159 PRO H 160 0 -4.32 CISPEP 4 SER L 7 PRO L 8 0 -1.45 CISPEP 5 THR L 94 PRO L 95 0 1.58 CISPEP 6 TYR L 140 PRO L 141 0 1.34 CISPEP 7 PRO B 164 PRO B 165 0 3.84 CISPEP 8 PHE C 157 PRO C 158 0 -3.85 CISPEP 9 GLU C 159 PRO C 160 0 -2.15 CISPEP 10 SER D 7 PRO D 8 0 1.42 CISPEP 11 THR D 94 PRO D 95 0 -1.32 CISPEP 12 TYR D 140 PRO D 141 0 -0.51 CISPEP 13 PRO E 164 PRO E 165 0 10.33 CISPEP 14 PHE F 157 PRO F 158 0 -4.76 CISPEP 15 GLU F 159 PRO F 160 0 -6.44 CISPEP 16 SER G 7 PRO G 8 0 -4.69 CISPEP 17 THR G 94 PRO G 95 0 1.43 CISPEP 18 TYR G 140 PRO G 141 0 -1.11 CRYST1 112.483 159.018 175.990 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008890 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006289 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005682 0.00000