HEADER HYDROLASE 14-JUN-22 7Y4B TITLE CRYSTAL STRUCTURE OF DUSP10 MUTANT_D59A COMPND MOL_ID: 1; COMPND 2 MOLECULE: DUAL SPECIFICITY PROTEIN PHOSPHATASE 10; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MITOGEN-ACTIVATED PROTEIN KINASE PHOSPHATASE 5,MAP KINASE COMPND 5 PHOSPHATASE 5,MKP-5; COMPND 6 EC: 3.1.3.16,3.1.3.48; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DUSP10, MKP5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS DUAL SPECIFICITY PROTEIN PHOSPHATASE 10, MAP KINASE PHOSPHATASE 5, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR I.C.HU,P.C.LYU REVDAT 2 29-NOV-23 7Y4B 1 REMARK REVDAT 1 21-JUN-23 7Y4B 0 JRNL AUTH I.C.HU,P.C.LYU JRNL TITL CRYSTAL STRUCTURE OF DUSP10 MUTANT_D59A JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.0 REMARK 3 NUMBER OF REFLECTIONS : 23130 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.590 REMARK 3 FREE R VALUE TEST SET COUNT : 1986 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.7600 - 4.4800 0.91 1558 144 0.1685 0.1903 REMARK 3 2 4.4800 - 3.5600 0.72 1219 119 0.1448 0.1958 REMARK 3 3 3.5600 - 3.1100 0.88 1525 143 0.1799 0.2461 REMARK 3 4 3.1100 - 2.8300 0.89 1523 139 0.2034 0.2394 REMARK 3 5 2.8300 - 2.6200 0.88 1509 151 0.1978 0.2273 REMARK 3 6 2.6200 - 2.4700 0.90 1539 138 0.1979 0.2751 REMARK 3 7 2.4700 - 2.3500 0.90 1553 145 0.2043 0.2684 REMARK 3 8 2.3500 - 2.2400 0.88 1502 139 0.1996 0.2648 REMARK 3 9 2.2400 - 2.1600 0.91 1582 152 0.1970 0.2280 REMARK 3 10 2.1600 - 2.0800 0.92 1574 147 0.1894 0.2456 REMARK 3 11 2.0800 - 2.0200 0.91 1557 149 0.2021 0.2294 REMARK 3 12 2.0200 - 1.9600 0.93 1582 145 0.2024 0.2368 REMARK 3 13 1.9600 - 1.9100 0.93 1589 161 0.2252 0.3122 REMARK 3 14 1.9100 - 1.8600 0.76 1332 114 0.2434 0.3273 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.194 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.084 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 2454 REMARK 3 ANGLE : 1.229 3318 REMARK 3 CHIRALITY : 0.063 366 REMARK 3 PLANARITY : 0.010 432 REMARK 3 DIHEDRAL : 7.176 324 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 19 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 109 THROUGH 123 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.5261 -13.5994 -9.9847 REMARK 3 T TENSOR REMARK 3 T11: 0.4437 T22: 0.3152 REMARK 3 T33: 0.2350 T12: -0.1034 REMARK 3 T13: -0.0113 T23: 0.0178 REMARK 3 L TENSOR REMARK 3 L11: 3.7681 L22: 4.5514 REMARK 3 L33: 5.6802 L12: 0.0089 REMARK 3 L13: 1.2385 L23: 1.3742 REMARK 3 S TENSOR REMARK 3 S11: -0.1971 S12: -0.3301 S13: -0.0709 REMARK 3 S21: 0.8089 S22: 0.3290 S23: -0.2231 REMARK 3 S31: 0.4806 S32: -0.3722 S33: -0.1062 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 124 THROUGH 130 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.1503 -15.9964 -16.4464 REMARK 3 T TENSOR REMARK 3 T11: 0.7034 T22: 0.7127 REMARK 3 T33: 0.5820 T12: -0.1373 REMARK 3 T13: 0.0888 T23: -0.0197 REMARK 3 L TENSOR REMARK 3 L11: -0.0144 L22: 1.1327 REMARK 3 L33: 0.9395 L12: -0.0336 REMARK 3 L13: -0.0281 L23: 1.0762 REMARK 3 S TENSOR REMARK 3 S11: 0.3139 S12: -0.7703 S13: -0.1163 REMARK 3 S21: -0.3314 S22: -0.5086 S23: 0.9935 REMARK 3 S31: 0.6322 S32: -1.0984 S33: 0.2062 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 131 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.4039 -25.2606 -14.4521 REMARK 3 T TENSOR REMARK 3 T11: 0.5733 T22: 0.3123 REMARK 3 T33: 0.4504 T12: 0.0379 REMARK 3 T13: -0.1093 T23: -0.0020 REMARK 3 L TENSOR REMARK 3 L11: 4.7485 L22: 1.8299 REMARK 3 L33: 5.9491 L12: 0.8422 REMARK 3 L13: 3.4358 L23: 1.4649 REMARK 3 S TENSOR REMARK 3 S11: -0.0468 S12: -0.4751 S13: -0.5196 REMARK 3 S21: 0.4277 S22: 0.0761 S23: -0.5627 REMARK 3 S31: 1.3269 S32: -0.0119 S33: -0.4773 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 8 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.7685 3.0950 -4.8919 REMARK 3 T TENSOR REMARK 3 T11: 0.4066 T22: 0.3892 REMARK 3 T33: 0.3830 T12: 0.1696 REMARK 3 T13: -0.0693 T23: -0.0292 REMARK 3 L TENSOR REMARK 3 L11: 2.1466 L22: 6.6885 REMARK 3 L33: 4.6684 L12: 0.1799 REMARK 3 L13: 0.3367 L23: 2.5465 REMARK 3 S TENSOR REMARK 3 S11: -0.1244 S12: -0.1226 S13: 0.6112 REMARK 3 S21: -0.6945 S22: -0.0077 S23: 0.3049 REMARK 3 S31: -0.9937 S32: -0.7306 S33: 0.2686 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 9 THROUGH 21 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.3734 3.3458 1.8398 REMARK 3 T TENSOR REMARK 3 T11: 0.2598 T22: 0.3697 REMARK 3 T33: 0.2690 T12: 0.1257 REMARK 3 T13: -0.0442 T23: -0.0312 REMARK 3 L TENSOR REMARK 3 L11: 2.2517 L22: 2.6989 REMARK 3 L33: 4.9490 L12: 0.8791 REMARK 3 L13: -0.6616 L23: 1.7396 REMARK 3 S TENSOR REMARK 3 S11: -0.2941 S12: -0.1437 S13: 0.4699 REMARK 3 S21: -0.1022 S22: 0.0452 S23: 0.3464 REMARK 3 S31: -0.4345 S32: -0.9994 S33: 0.2024 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 22 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.1556 -1.8659 5.8926 REMARK 3 T TENSOR REMARK 3 T11: 0.2686 T22: 0.4404 REMARK 3 T33: 0.3227 T12: -0.0109 REMARK 3 T13: 0.0329 T23: -0.0591 REMARK 3 L TENSOR REMARK 3 L11: 2.3501 L22: 3.0801 REMARK 3 L33: 4.0333 L12: 1.4117 REMARK 3 L13: 1.5606 L23: 1.7880 REMARK 3 S TENSOR REMARK 3 S11: 0.1245 S12: -0.3845 S13: 0.0732 REMARK 3 S21: 0.1503 S22: -0.4668 S23: 0.6028 REMARK 3 S31: 0.0304 S32: -0.9671 S33: 0.2878 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 36 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.0746 3.7314 13.3107 REMARK 3 T TENSOR REMARK 3 T11: 0.3114 T22: 0.3129 REMARK 3 T33: 0.2145 T12: -0.0501 REMARK 3 T13: 0.0259 T23: -0.0110 REMARK 3 L TENSOR REMARK 3 L11: 2.6014 L22: 4.2902 REMARK 3 L33: 4.6312 L12: 1.2439 REMARK 3 L13: 1.0528 L23: 1.4293 REMARK 3 S TENSOR REMARK 3 S11: 0.2062 S12: -0.2254 S13: 0.0924 REMARK 3 S21: 0.5126 S22: -0.3980 S23: 0.3972 REMARK 3 S31: 0.1171 S32: -0.5092 S33: 0.1877 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 55 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.1921 10.7077 5.5225 REMARK 3 T TENSOR REMARK 3 T11: 0.4809 T22: 0.3661 REMARK 3 T33: 0.4197 T12: -0.0675 REMARK 3 T13: 0.0763 T23: 0.0507 REMARK 3 L TENSOR REMARK 3 L11: 3.3073 L22: 5.5793 REMARK 3 L33: 5.7674 L12: 0.3298 REMARK 3 L13: 0.6647 L23: 1.3285 REMARK 3 S TENSOR REMARK 3 S11: 0.2878 S12: 0.5939 S13: 0.9673 REMARK 3 S21: 0.0712 S22: 0.2751 S23: -0.6279 REMARK 3 S31: -1.3364 S32: 0.1457 S33: -0.1553 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 66 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.9690 -5.6822 4.6057 REMARK 3 T TENSOR REMARK 3 T11: 0.3546 T22: 0.2508 REMARK 3 T33: 0.2896 T12: 0.0380 REMARK 3 T13: -0.0541 T23: 0.0088 REMARK 3 L TENSOR REMARK 3 L11: 2.8995 L22: 3.3701 REMARK 3 L33: 3.4091 L12: 1.8233 REMARK 3 L13: 0.8721 L23: 1.5569 REMARK 3 S TENSOR REMARK 3 S11: 0.4782 S12: -0.0259 S13: -0.7611 REMARK 3 S21: 0.7361 S22: -0.0240 S23: -0.5123 REMARK 3 S31: 0.7663 S32: 0.1834 S33: -0.2265 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 83 THROUGH 108 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.1721 1.4131 -0.5094 REMARK 3 T TENSOR REMARK 3 T11: 0.2384 T22: 0.1893 REMARK 3 T33: 0.2505 T12: 0.0451 REMARK 3 T13: -0.0088 T23: 0.0168 REMARK 3 L TENSOR REMARK 3 L11: 2.4081 L22: 2.1228 REMARK 3 L33: 5.2060 L12: 0.5204 REMARK 3 L13: 0.2311 L23: 1.5700 REMARK 3 S TENSOR REMARK 3 S11: -0.0017 S12: -0.0435 S13: -0.0264 REMARK 3 S21: -0.1441 S22: -0.0490 S23: -0.0385 REMARK 3 S31: -0.3207 S32: -0.2472 S33: -0.0350 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 109 THROUGH 123 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.5253 -0.0832 -12.3978 REMARK 3 T TENSOR REMARK 3 T11: 0.3119 T22: 0.2796 REMARK 3 T33: 0.2746 T12: -0.0358 REMARK 3 T13: 0.0255 T23: 0.0011 REMARK 3 L TENSOR REMARK 3 L11: 5.6178 L22: 3.8311 REMARK 3 L33: 6.7949 L12: 0.8325 REMARK 3 L13: 0.4906 L23: 1.3583 REMARK 3 S TENSOR REMARK 3 S11: 0.0688 S12: 0.6579 S13: -0.2173 REMARK 3 S21: -0.2608 S22: -0.0122 S23: -0.1316 REMARK 3 S31: -0.2789 S32: 0.0867 S33: -0.1172 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 124 THROUGH 130 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.8902 10.2315 -7.2913 REMARK 3 T TENSOR REMARK 3 T11: 0.5918 T22: 0.3003 REMARK 3 T33: 0.4644 T12: -0.0001 REMARK 3 T13: -0.0680 T23: 0.0301 REMARK 3 L TENSOR REMARK 3 L11: 1.8454 L22: 1.4350 REMARK 3 L33: 1.9520 L12: 1.3172 REMARK 3 L13: 0.9383 L23: 1.5131 REMARK 3 S TENSOR REMARK 3 S11: -0.2491 S12: 0.1873 S13: 0.9790 REMARK 3 S21: -0.7508 S22: 0.1438 S23: -0.0418 REMARK 3 S31: -1.3405 S32: -0.0683 S33: 0.2349 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 131 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.4461 1.4598 -5.8115 REMARK 3 T TENSOR REMARK 3 T11: 0.3036 T22: 0.5372 REMARK 3 T33: 0.3421 T12: -0.1193 REMARK 3 T13: 0.0674 T23: -0.1145 REMARK 3 L TENSOR REMARK 3 L11: 3.1265 L22: 5.0789 REMARK 3 L33: 6.0486 L12: 0.3796 REMARK 3 L13: -0.0062 L23: 3.1980 REMARK 3 S TENSOR REMARK 3 S11: 0.0448 S12: 0.3144 S13: -0.1520 REMARK 3 S21: -0.1574 S22: 0.3354 S23: -0.6829 REMARK 3 S31: -0.3044 S32: 1.1646 S33: -0.4221 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 8 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.4019 -3.6572 -19.8189 REMARK 3 T TENSOR REMARK 3 T11: 0.4333 T22: 0.4067 REMARK 3 T33: 0.5805 T12: 0.1178 REMARK 3 T13: -0.1483 T23: -0.1040 REMARK 3 L TENSOR REMARK 3 L11: 3.5116 L22: 2.0099 REMARK 3 L33: 5.1445 L12: 2.6397 REMARK 3 L13: 2.2160 L23: 1.1761 REMARK 3 S TENSOR REMARK 3 S11: -0.4064 S12: 0.0498 S13: 0.9655 REMARK 3 S21: -1.0222 S22: -0.3553 S23: 1.4968 REMARK 3 S31: -0.4785 S32: -1.1343 S33: 0.2941 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 9 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.7003 -3.1070 -26.6795 REMARK 3 T TENSOR REMARK 3 T11: 0.4288 T22: 0.3616 REMARK 3 T33: 0.3480 T12: 0.0764 REMARK 3 T13: -0.0363 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 2.1374 L22: 2.3304 REMARK 3 L33: 4.5669 L12: 1.0795 REMARK 3 L13: 1.8857 L23: 1.6935 REMARK 3 S TENSOR REMARK 3 S11: 0.1222 S12: 0.2013 S13: 0.3257 REMARK 3 S21: -0.4155 S22: -0.1891 S23: 0.5570 REMARK 3 S31: -0.8630 S32: -0.3388 S33: 0.3080 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 28 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.9822 -8.1761 -34.5055 REMARK 3 T TENSOR REMARK 3 T11: 0.4984 T22: 0.2813 REMARK 3 T33: 0.2495 T12: -0.1034 REMARK 3 T13: 0.0070 T23: 0.0126 REMARK 3 L TENSOR REMARK 3 L11: 1.7432 L22: 1.9633 REMARK 3 L33: 3.4564 L12: 0.9632 REMARK 3 L13: 1.0727 L23: 1.6618 REMARK 3 S TENSOR REMARK 3 S11: -0.3792 S12: 0.2479 S13: 0.2094 REMARK 3 S21: -0.5213 S22: 0.2263 S23: -0.1453 REMARK 3 S31: -0.8683 S32: 0.3561 S33: 0.0857 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 55 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1233 -26.1064 -27.7779 REMARK 3 T TENSOR REMARK 3 T11: 0.5334 T22: 0.3978 REMARK 3 T33: 0.3648 T12: -0.1146 REMARK 3 T13: 0.0307 T23: -0.0518 REMARK 3 L TENSOR REMARK 3 L11: 2.5808 L22: 3.1264 REMARK 3 L33: 5.1490 L12: 0.4688 REMARK 3 L13: 1.5938 L23: 1.1899 REMARK 3 S TENSOR REMARK 3 S11: 0.0858 S12: 0.0178 S13: -0.5437 REMARK 3 S21: 0.4721 S22: 0.1782 S23: -0.0754 REMARK 3 S31: 0.9918 S32: -0.8709 S33: -0.2206 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 66 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.8069 -13.3702 -25.9646 REMARK 3 T TENSOR REMARK 3 T11: 0.3781 T22: 0.4318 REMARK 3 T33: 0.3839 T12: -0.0791 REMARK 3 T13: 0.0698 T23: -0.0958 REMARK 3 L TENSOR REMARK 3 L11: 2.1123 L22: 6.2095 REMARK 3 L33: 3.6835 L12: 2.6251 REMARK 3 L13: 1.3178 L23: 1.6301 REMARK 3 S TENSOR REMARK 3 S11: -0.4891 S12: 0.6592 S13: -0.5191 REMARK 3 S21: -0.5502 S22: 0.9314 S23: -1.2541 REMARK 3 S31: -0.2115 S32: 1.0155 S33: -0.2891 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 83 THROUGH 108 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.9357 -13.1504 -21.9178 REMARK 3 T TENSOR REMARK 3 T11: 0.2708 T22: 0.2670 REMARK 3 T33: 0.2798 T12: -0.0170 REMARK 3 T13: 0.0409 T23: -0.0092 REMARK 3 L TENSOR REMARK 3 L11: 2.2903 L22: 2.8165 REMARK 3 L33: 5.0230 L12: 0.7600 REMARK 3 L13: 1.6572 L23: 1.3232 REMARK 3 S TENSOR REMARK 3 S11: 0.1289 S12: 0.0543 S13: -0.2694 REMARK 3 S21: -0.1012 S22: 0.1351 S23: -0.1668 REMARK 3 S31: 0.0007 S32: -0.0991 S33: -0.0922 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7Y4B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1300028665. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-FEB-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5-7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13C1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97622 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23176 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.860 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.8 REMARK 200 DATA REDUNDANCY : 1.900 REMARK 200 R MERGE (I) : 0.02800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.7480 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.12100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.650 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1ZZW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22.5%(W/V) PEG 3000, 100MM TRIS REMARK 280 BASE/HYDROCHLORIC ACID, 200MM CALCIUM ACETATE, PH 7.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 283K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE ARG B 66 O HOH B 201 1.08 REMARK 500 HH11 ARG A 110 O HOH A 203 1.21 REMARK 500 HD21 ASN A 146 O HOH A 204 1.45 REMARK 500 HH21 ARG A 66 O HOH A 206 1.48 REMARK 500 OE2 GLU A 78 O HOH A 201 1.80 REMARK 500 NE ARG B 66 O HOH B 201 1.83 REMARK 500 O HOH A 289 O HOH B 244 1.86 REMARK 500 O HOH A 292 O HOH A 297 1.99 REMARK 500 OE2 GLU A 46 O HOH A 202 2.03 REMARK 500 NH1 ARG A 110 O HOH A 203 2.06 REMARK 500 OE1 GLU B 78 O HOH B 202 2.09 REMARK 500 O HOH A 264 O HOH A 269 2.11 REMARK 500 ND2 ASN A 146 O HOH A 204 2.12 REMARK 500 OE1 GLU A 16 O HOH A 205 2.12 REMARK 500 O HOH A 247 O HOH A 294 2.14 REMARK 500 OE1 GLU B 46 O HOH B 203 2.16 REMARK 500 O HOH A 210 O HOH A 262 2.17 REMARK 500 O HOH A 281 O HOH A 286 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 238 O HOH B 253 1666 1.84 REMARK 500 O HOH A 296 O HOH B 265 1556 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 36 45.73 -94.11 REMARK 500 THR A 58 -160.53 -100.92 REMARK 500 CYS A 90 -132.76 -124.90 REMARK 500 SER A 95 -62.45 -127.23 REMARK 500 SER A 128 75.02 -171.84 REMARK 500 VAL A 148 49.20 -108.41 REMARK 500 GLU B 3 85.76 -168.53 REMARK 500 VAL B 36 49.39 -99.56 REMARK 500 CYS B 90 -110.83 -130.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 300 DISTANCE = 6.51 ANGSTROMS DBREF 7Y4B A 2 149 UNP Q9Y6W6 DUS10_HUMAN 320 467 DBREF 7Y4B B 2 149 UNP Q9Y6W6 DUS10_HUMAN 320 467 SEQADV 7Y4B SER A 1 UNP Q9Y6W6 EXPRESSION TAG SEQADV 7Y4B ALA A 59 UNP Q9Y6W6 ASP 377 ENGINEERED MUTATION SEQADV 7Y4B SER B 1 UNP Q9Y6W6 EXPRESSION TAG SEQADV 7Y4B ALA B 59 UNP Q9Y6W6 ASP 377 ENGINEERED MUTATION SEQRES 1 A 149 SER ALA GLU LEU THR PRO ILE LEU PRO PHE LEU PHE LEU SEQRES 2 A 149 GLY ASN GLU GLN ASP ALA GLN ASP LEU ASP THR MET GLN SEQRES 3 A 149 ARG LEU ASN ILE GLY TYR VAL ILE ASN VAL THR THR HIS SEQRES 4 A 149 LEU PRO LEU TYR HIS TYR GLU LYS GLY LEU PHE ASN TYR SEQRES 5 A 149 LYS ARG LEU PRO ALA THR ALA SER ASN LYS GLN ASN LEU SEQRES 6 A 149 ARG GLN TYR PHE GLU GLU ALA PHE GLU PHE ILE GLU GLU SEQRES 7 A 149 ALA HIS GLN CYS GLY LYS GLY LEU LEU ILE HIS CYS GLN SEQRES 8 A 149 ALA GLY VAL SER ARG SER ALA THR ILE VAL ILE ALA TYR SEQRES 9 A 149 LEU MET LYS HIS THR ARG MET THR MET THR ASP ALA TYR SEQRES 10 A 149 LYS PHE VAL LYS GLY LYS ARG PRO ILE ILE SER PRO ASN SEQRES 11 A 149 LEU ASN PHE MET GLY GLN LEU LEU GLU PHE GLU GLU ASP SEQRES 12 A 149 LEU ASN ASN GLY VAL THR SEQRES 1 B 149 SER ALA GLU LEU THR PRO ILE LEU PRO PHE LEU PHE LEU SEQRES 2 B 149 GLY ASN GLU GLN ASP ALA GLN ASP LEU ASP THR MET GLN SEQRES 3 B 149 ARG LEU ASN ILE GLY TYR VAL ILE ASN VAL THR THR HIS SEQRES 4 B 149 LEU PRO LEU TYR HIS TYR GLU LYS GLY LEU PHE ASN TYR SEQRES 5 B 149 LYS ARG LEU PRO ALA THR ALA SER ASN LYS GLN ASN LEU SEQRES 6 B 149 ARG GLN TYR PHE GLU GLU ALA PHE GLU PHE ILE GLU GLU SEQRES 7 B 149 ALA HIS GLN CYS GLY LYS GLY LEU LEU ILE HIS CYS GLN SEQRES 8 B 149 ALA GLY VAL SER ARG SER ALA THR ILE VAL ILE ALA TYR SEQRES 9 B 149 LEU MET LYS HIS THR ARG MET THR MET THR ASP ALA TYR SEQRES 10 B 149 LYS PHE VAL LYS GLY LYS ARG PRO ILE ILE SER PRO ASN SEQRES 11 B 149 LEU ASN PHE MET GLY GLN LEU LEU GLU PHE GLU GLU ASP SEQRES 12 B 149 LEU ASN ASN GLY VAL THR FORMUL 3 HOH *168(H2 O) HELIX 1 AA1 GLN A 17 GLN A 20 5 4 HELIX 2 AA2 ASP A 21 LEU A 28 1 8 HELIX 3 AA3 HIS A 44 GLY A 48 5 5 HELIX 4 AA4 LEU A 65 GLN A 67 5 3 HELIX 5 AA5 TYR A 68 CYS A 82 1 15 HELIX 6 AA6 SER A 95 THR A 109 1 15 HELIX 7 AA7 THR A 112 ARG A 124 1 13 HELIX 8 AA8 ASN A 130 ASN A 146 1 17 HELIX 9 AA9 GLN B 17 GLN B 20 5 4 HELIX 10 AB1 ASP B 21 LEU B 28 1 8 HELIX 11 AB2 HIS B 44 GLY B 48 5 5 HELIX 12 AB3 LEU B 65 GLN B 67 5 3 HELIX 13 AB4 TYR B 68 GLY B 83 1 16 HELIX 14 AB5 VAL B 94 THR B 109 1 16 HELIX 15 AB6 THR B 112 ARG B 124 1 13 HELIX 16 AB7 ASN B 130 ASN B 146 1 17 SHEET 1 AA1 5 THR A 5 LEU A 8 0 SHEET 2 AA1 5 LEU A 11 GLY A 14 -1 O LEU A 11 N ILE A 7 SHEET 3 AA1 5 GLY A 85 HIS A 89 1 O ILE A 88 N PHE A 12 SHEET 4 AA1 5 ILE A 30 ASN A 35 1 N ILE A 34 O LEU A 87 SHEET 5 AA1 5 ASN A 51 ARG A 54 1 O ASN A 51 N GLY A 31 SHEET 1 AA2 5 THR B 5 LEU B 8 0 SHEET 2 AA2 5 LEU B 11 GLY B 14 -1 O LEU B 11 N ILE B 7 SHEET 3 AA2 5 GLY B 85 HIS B 89 1 O LEU B 86 N PHE B 12 SHEET 4 AA2 5 ILE B 30 ASN B 35 1 N ILE B 34 O LEU B 87 SHEET 5 AA2 5 ASN B 51 ARG B 54 1 O ASN B 51 N GLY B 31 CRYST1 40.230 41.584 56.826 96.03 100.44 117.45 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024857 0.012912 0.007549 0.00000 SCALE2 0.000000 0.027099 0.005997 0.00000 SCALE3 0.000000 0.000000 0.018327 0.00000