data_7Y4N # _entry.id 7Y4N # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.360 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7Y4N pdb_00007y4n 10.2210/pdb7y4n/pdb WWPDB D_1300023768 ? ? BMRB 36493 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Insight into the C-terminal SH3 mediated binding of Drosophila Drk towards Sos and Dos' _pdbx_database_related.db_id 36493 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 7Y4N _pdbx_database_status.recvd_initial_deposition_date 2022-06-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Pooppadi, M.S.' 1 0000-0003-0662-8248 'Ikeya, T.' 2 0000-0002-6721-3727 'Sugasawa, H.' 3 0000-0002-1134-5712 'Watanabe, R.' 4 0000-0002-8644-1696 'Mishima, M.' 5 0000-0001-7626-7287 'Inomata, K.' 6 0000-0002-6816-7961 'Ito, Y.' 7 0000-0002-1030-4660 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biochem.Biophys.Res.Commun. _citation.journal_id_ASTM BBRCA9 _citation.journal_id_CSD 0146 _citation.journal_id_ISSN 1090-2104 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 625 _citation.language ? _citation.page_first 87 _citation.page_last 93 _citation.title 'Insight into the C-terminal SH3 domain mediated binding of Drosophila Drk to Sos and Dos.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.bbrc.2022.08.007 _citation.pdbx_database_id_PubMed 35952612 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sayeesh, P.M.' 1 ? primary 'Ikeya, T.' 2 ? primary 'Sugasawa, H.' 3 ? primary 'Watanabe, R.' 4 ? primary 'Mishima, M.' 5 ? primary 'Inomata, K.' 6 ? primary 'Ito, Y.' 7 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7Y4N _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.000 _cell.length_a_esd ? _cell.length_b 1.000 _cell.length_b_esd ? _cell.length_c 1.000 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 7Y4N _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Growth factor receptor-bound protein 2' _entity.formula_weight 6913.521 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Downstream of receptor kinase,Protein enhancer of sevenless 2B' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GEEMLVQALYDFVPQESGELDFRRGDVITVTDRSDENWWNGEIGNRKGIFPATYVTPYHS _entity_poly.pdbx_seq_one_letter_code_can GEEMLVQALYDFVPQESGELDFRRGDVITVTDRSDENWWNGEIGNRKGIFPATYVTPYHS _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLU n 1 3 GLU n 1 4 MET n 1 5 LEU n 1 6 VAL n 1 7 GLN n 1 8 ALA n 1 9 LEU n 1 10 TYR n 1 11 ASP n 1 12 PHE n 1 13 VAL n 1 14 PRO n 1 15 GLN n 1 16 GLU n 1 17 SER n 1 18 GLY n 1 19 GLU n 1 20 LEU n 1 21 ASP n 1 22 PHE n 1 23 ARG n 1 24 ARG n 1 25 GLY n 1 26 ASP n 1 27 VAL n 1 28 ILE n 1 29 THR n 1 30 VAL n 1 31 THR n 1 32 ASP n 1 33 ARG n 1 34 SER n 1 35 ASP n 1 36 GLU n 1 37 ASN n 1 38 TRP n 1 39 TRP n 1 40 ASN n 1 41 GLY n 1 42 GLU n 1 43 ILE n 1 44 GLY n 1 45 ASN n 1 46 ARG n 1 47 LYS n 1 48 GLY n 1 49 ILE n 1 50 PHE n 1 51 PRO n 1 52 ALA n 1 53 THR n 1 54 TYR n 1 55 VAL n 1 56 THR n 1 57 PRO n 1 58 TYR n 1 59 HIS n 1 60 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 60 _entity_src_gen.gene_src_common_name 'fruit fly' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene drk _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Drosophila melanogaster' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 7227 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GRAP_DROME _struct_ref.pdbx_db_accession Q08012 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code EEMLVQALYDFVPQESGELDFRRGDVITVTDRSDENWWNGEIGNRKGIFPATYVTPYHS _struct_ref.pdbx_align_begin 153 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7Y4N _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 60 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q08012 _struct_ref_seq.db_align_beg 153 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 211 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 153 _struct_ref_seq.pdbx_auth_seq_align_end 211 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 7Y4N _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q08012 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 152 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '13C-separated NOESY' 1 isotropic 7 1 1 '15N-sperated NOESY' 1 isotropic 12 2 2 '2D 1H-15N HSQC' 1 isotropic 14 1 1 '3D HNCO' 1 isotropic 15 1 1 '3D HNCACO' 1 isotropic 16 1 1 '3D HNCA' 1 isotropic 17 1 1 '3D HN(CO)CA' 1 isotropic 13 1 1 '3D CBCA(CO)NH' 1 isotropic 18 1 1 '3D CBCANH' 1 isotropic 19 1 1 '3D CCCONH' 1 isotropic 20 1 1 '3D H(CCO)NH' 1 isotropic 21 1 1 '3D 1H-15N TOCSY' 1 isotropic 22 1 1 '3D 1H-15N COSY' 1 isotropic 23 1 1 '3D TROSY HNCO' 1 isotropic # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.details _pdbx_nmr_exptl_sample_conditions.ionic_strength_err _pdbx_nmr_exptl_sample_conditions.ionic_strength_units _pdbx_nmr_exptl_sample_conditions.label _pdbx_nmr_exptl_sample_conditions.pH_err _pdbx_nmr_exptl_sample_conditions.pH_units _pdbx_nmr_exptl_sample_conditions.pressure_err _pdbx_nmr_exptl_sample_conditions.temperature_err _pdbx_nmr_exptl_sample_conditions.temperature_units 1 298 atm AMBIENT 7.4 100 ? ? mM 13C15N_Sample ? pH ? ? K 2 298 atm AMBIENT 7.4 100 ? ? mM 15N_Sample ? pH ? ? K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '1 mM [U-100% 13C; U-100% 15N] the C-terminal SH3 domain of Drosophila, 90% H2O/10% D2O' '90% H2O/10% D2O' 13C15N_Sample solution ? 2 '1 mM [U-100% 15N] the C-terminal SH3 domain of Drosophila, 90% H2O/10% D2O' '90% H2O/10% D2O' 15N_Sample solution ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AVANCE III' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.details ? # _pdbx_nmr_refine.entry_id 7Y4N _pdbx_nmr_refine.method 'molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 5 # _pdbx_nmr_ensemble.entry_id 7Y4N _pdbx_nmr_ensemble.conformers_calculated_total_number 20 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 7Y4N _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'target function' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 processing Azara 2.8 'Boucher, W.' 2 'chemical shift assignment' 'CcpNmr Analysis' 2.5.1 CCPN 3 'structure calculation' CYANA 3.98 'Guntert, P., Mumenthaler, C., and Wuthrich, K.' 4 collection TopSpin '3.5 PL7' 'Bruker Biospin' 5 refinement OPALp ? 'Luginbuhl, R., Guntert, P., Billeter, M., and Wuthrich, K.' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7Y4N _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 7Y4N _struct.title 'Insight into the C-terminal SH3 domain mediated binding of Drosophila Drk to Sos and Dos' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7Y4N _struct_keywords.text 'NMR spectroscopy, SH3, Drosophila, Adapter protein, PEPTIDE BINDING PROTEIN' _struct_keywords.pdbx_keywords 'PEPTIDE BINDING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ARG A 46 ? PRO A 51 ? ARG A 197 PRO A 202 AA1 2 TRP A 38 ? ILE A 43 ? TRP A 189 ILE A 194 AA1 3 VAL A 27 ? ASP A 32 ? VAL A 178 ASP A 183 AA1 4 LEU A 5 ? ALA A 8 ? LEU A 156 ALA A 159 AA1 5 VAL A 55 ? PRO A 57 ? VAL A 206 PRO A 208 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ARG A 46 ? O ARG A 197 N ILE A 43 ? N ILE A 194 AA1 2 3 O GLU A 42 ? O GLU A 193 N THR A 29 ? N THR A 180 AA1 3 4 O ILE A 28 ? O ILE A 179 N VAL A 6 ? N VAL A 157 AA1 4 5 N GLN A 7 ? N GLN A 158 O THR A 56 ? O THR A 207 # _database_PDB_matrix.entry_id 7Y4N _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 7Y4N _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 152 152 GLY GLY A . n A 1 2 GLU 2 153 153 GLU GLU A . n A 1 3 GLU 3 154 154 GLU GLU A . n A 1 4 MET 4 155 155 MET MET A . n A 1 5 LEU 5 156 156 LEU LEU A . n A 1 6 VAL 6 157 157 VAL VAL A . n A 1 7 GLN 7 158 158 GLN GLN A . n A 1 8 ALA 8 159 159 ALA ALA A . n A 1 9 LEU 9 160 160 LEU LEU A . n A 1 10 TYR 10 161 161 TYR TYR A . n A 1 11 ASP 11 162 162 ASP ASP A . n A 1 12 PHE 12 163 163 PHE PHE A . n A 1 13 VAL 13 164 164 VAL VAL A . n A 1 14 PRO 14 165 165 PRO PRO A . n A 1 15 GLN 15 166 166 GLN GLN A . n A 1 16 GLU 16 167 167 GLU GLU A . n A 1 17 SER 17 168 168 SER SER A . n A 1 18 GLY 18 169 169 GLY GLY A . n A 1 19 GLU 19 170 170 GLU GLU A . n A 1 20 LEU 20 171 171 LEU LEU A . n A 1 21 ASP 21 172 172 ASP ASP A . n A 1 22 PHE 22 173 173 PHE PHE A . n A 1 23 ARG 23 174 174 ARG ARG A . n A 1 24 ARG 24 175 175 ARG ARG A . n A 1 25 GLY 25 176 176 GLY GLY A . n A 1 26 ASP 26 177 177 ASP ASP A . n A 1 27 VAL 27 178 178 VAL VAL A . n A 1 28 ILE 28 179 179 ILE ILE A . n A 1 29 THR 29 180 180 THR THR A . n A 1 30 VAL 30 181 181 VAL VAL A . n A 1 31 THR 31 182 182 THR THR A . n A 1 32 ASP 32 183 183 ASP ASP A . n A 1 33 ARG 33 184 184 ARG ARG A . n A 1 34 SER 34 185 185 SER SER A . n A 1 35 ASP 35 186 186 ASP ASP A . n A 1 36 GLU 36 187 187 GLU GLU A . n A 1 37 ASN 37 188 188 ASN ASN A . n A 1 38 TRP 38 189 189 TRP TRP A . n A 1 39 TRP 39 190 190 TRP TRP A . n A 1 40 ASN 40 191 191 ASN ASN A . n A 1 41 GLY 41 192 192 GLY GLY A . n A 1 42 GLU 42 193 193 GLU GLU A . n A 1 43 ILE 43 194 194 ILE ILE A . n A 1 44 GLY 44 195 195 GLY GLY A . n A 1 45 ASN 45 196 196 ASN ASN A . n A 1 46 ARG 46 197 197 ARG ARG A . n A 1 47 LYS 47 198 198 LYS LYS A . n A 1 48 GLY 48 199 199 GLY GLY A . n A 1 49 ILE 49 200 200 ILE ILE A . n A 1 50 PHE 50 201 201 PHE PHE A . n A 1 51 PRO 51 202 202 PRO PRO A . n A 1 52 ALA 52 203 203 ALA ALA A . n A 1 53 THR 53 204 204 THR THR A . n A 1 54 TYR 54 205 205 TYR TYR A . n A 1 55 VAL 55 206 206 VAL VAL A . n A 1 56 THR 56 207 207 THR THR A . n A 1 57 PRO 57 208 208 PRO PRO A . n A 1 58 TYR 58 209 209 TYR TYR A . n A 1 59 HIS 59 210 210 HIS HIS A . n A 1 60 SER 60 211 211 SER SER A . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email ito-yutaka@tmu.ac.jp _pdbx_contact_author.name_first Yutaka _pdbx_contact_author.name_last Ito _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-1030-4660 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2022-08-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 'the C-terminal SH3 domain of Drosophila' 1 ? mM '[U-100% 13C; U-100% 15N]' 2 'the C-terminal SH3 domain of Drosophila' 1 ? mM '[U-100% 15N]' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 173 ? ? 178.69 174.65 2 1 ARG A 184 ? ? -106.16 72.54 3 2 SER A 185 ? ? -54.37 -77.05 4 3 SER A 185 ? ? -42.84 -70.70 5 4 GLU A 154 ? ? -157.12 5.68 6 5 PRO A 208 ? ? -69.51 96.40 7 7 ASP A 183 ? ? -164.31 103.05 8 7 ARG A 184 ? ? -68.69 72.95 9 7 SER A 185 ? ? -66.97 -79.57 10 8 GLU A 154 ? ? -156.48 1.88 11 8 PHE A 173 ? ? -171.19 -175.21 12 9 SER A 185 ? ? -39.40 -73.82 13 12 SER A 185 ? ? -49.03 -71.15 14 15 SER A 185 ? ? -43.42 -72.33 15 16 GLU A 154 ? ? -160.65 10.00 16 17 SER A 185 ? ? -48.34 -73.09 17 18 SER A 185 ? ? -66.46 -88.67 18 19 GLU A 154 ? ? -65.71 8.72 19 19 SER A 185 ? ? -49.37 -72.70 20 20 GLU A 154 ? ? -64.38 1.26 21 20 SER A 185 ? ? -48.13 -73.15 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Science and Technology' Japan 'CREST; JPMJCR13M3' 1 'Other government' ? 'Tokyo Human Resources Fund for City Diplomacy' 2 'Japan Society for the Promotion of Science (JSPS)' Japan JP26102538,JP19H05773 3 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'NMR Distance Restraints' _pdbx_struct_assembly_auth_evidence.details ;distance restraints derived from NOESYs dihedral angle restraints derived from chemical shifts hydrogen bond restraints supported by 3j-HNCO ; #