HEADER SIGNALING PROTEIN 15-JUN-22 7Y4P TITLE HUMAN PLEXIN A1, EXTRACELLULAR DOMAINS 1-4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLEXIN-A1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ECTODOMAIN FRAGMENT; COMPND 5 SYNONYM: SEMAPHORIN RECEPTOR NOV; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PLXNA1, NOV, PLXN1; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293S GNT1- KEYWDS LIGAND BINDING DOMAIN OF RECEPTOR, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.TANAKA,M.NEYAZAKI,T.NOGI REVDAT 3 29-NOV-23 7Y4P 1 REMARK REVDAT 2 16-NOV-22 7Y4P 1 JRNL REVDAT 1 19-OCT-22 7Y4P 0 JRNL AUTH T.TANAKA,T.EKIMOTO,M.NAGATOMO,M.NEYAZAKI,E.SHIMOJI,T.YAMANE, JRNL AUTH 2 S.KANAGAWA,R.OI,E.MIHARA,J.TAKAGI,S.AKASHI,M.IKEGUCHI,T.NOGI JRNL TITL HYBRID IN VITRO/IN SILICO ANALYSIS OF LOW-AFFINITY JRNL TITL 2 PROTEIN-PROTEIN INTERACTIONS THAT REGULATE SIGNAL JRNL TITL 3 TRANSDUCTION BY SEMA6D. JRNL REF PROTEIN SCI. V. 31 E4452 2022 JRNL REFN ESSN 1469-896X JRNL PMID 36156831 JRNL DOI 10.1002/PRO.4452 REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.28 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 62479 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 3101 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.2800 - 9.7830 0.96 2638 130 0.1880 0.1840 REMARK 3 2 9.7830 - 7.7749 0.96 2641 124 0.1641 0.2017 REMARK 3 3 7.7749 - 6.7950 0.96 2624 127 0.1908 0.2218 REMARK 3 4 6.7950 - 6.1750 0.98 2675 147 0.2133 0.2369 REMARK 3 5 6.1750 - 5.7331 0.99 2718 144 0.2192 0.2160 REMARK 3 6 5.7331 - 5.3955 0.98 2680 154 0.2140 0.2683 REMARK 3 7 5.3955 - 5.1256 0.98 2662 148 0.2144 0.2650 REMARK 3 8 5.1256 - 4.9027 0.98 2717 119 0.1827 0.2392 REMARK 3 9 4.9027 - 4.7141 0.99 2680 164 0.1935 0.1591 REMARK 3 10 4.7141 - 4.5516 0.99 2694 121 0.1960 0.1877 REMARK 3 11 4.5516 - 4.4093 0.99 2704 126 0.1998 0.2316 REMARK 3 12 4.4093 - 4.2834 0.99 2721 156 0.2204 0.2481 REMARK 3 13 4.2834 - 4.1707 0.99 2716 138 0.2507 0.2483 REMARK 3 14 4.1707 - 4.0690 1.00 2730 135 0.2548 0.3379 REMARK 3 15 4.0690 - 3.9765 1.00 2726 161 0.2668 0.2909 REMARK 3 16 3.9765 - 3.8919 1.00 2737 125 0.2783 0.3128 REMARK 3 17 3.8919 - 3.8141 1.00 2740 131 0.2936 0.3010 REMARK 3 18 3.8141 - 3.7421 1.00 2745 148 0.3117 0.3895 REMARK 3 19 3.7421 - 3.6753 1.00 2729 140 0.3182 0.3339 REMARK 3 20 3.6753 - 3.6130 1.00 2689 157 0.3161 0.3283 REMARK 3 21 3.6130 - 3.5548 1.00 2694 168 0.3425 0.2631 REMARK 3 22 3.5548 - 3.5001 1.00 2718 138 0.3675 0.4141 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.470 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.940 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 5470 REMARK 3 ANGLE : 0.752 7445 REMARK 3 CHIRALITY : 0.048 830 REMARK 3 PLANARITY : 0.004 971 REMARK 3 DIHEDRAL : 8.290 3261 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7Y4P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1300030260. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-DEC-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9800 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66184 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.500 REMARK 200 RESOLUTION RANGE LOW (A) : 49.280 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 8.300 REMARK 200 R MERGE (I) : 0.10500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.67 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3OKT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 85.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 8.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.2 M SODIUM POTASSIUM PHOSPHATE REMARK 280 BUFFER (PH 7.7), VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 112.38700 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 112.38700 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 102.52000 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 112.38700 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 112.38700 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 102.52000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 112.38700 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 112.38700 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 102.52000 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 112.38700 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 112.38700 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 102.52000 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 112.38700 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 112.38700 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 102.52000 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 112.38700 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 112.38700 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 102.52000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 112.38700 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 112.38700 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 102.52000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 112.38700 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 112.38700 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 102.52000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 25 REMARK 465 ARG A 26 REMARK 465 GLU A 27 REMARK 465 ALA A 28 REMARK 465 GLY A 29 REMARK 465 LEU A 30 REMARK 465 PRO A 31 REMARK 465 ARG A 32 REMARK 465 ALA A 33 REMARK 465 GLY A 34 REMARK 465 GLY A 35 REMARK 465 GLY A 36 REMARK 465 SER A 37 REMARK 465 SER A 709 REMARK 465 ARG A 710 REMARK 465 LEU A 711 REMARK 465 GLU A 712 REMARK 465 ASN A 713 REMARK 465 LEU A 714 REMARK 465 TYR A 715 REMARK 465 PHE A 716 REMARK 465 GLN A 717 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 47 -135.76 -67.41 REMARK 500 THR A 52 -45.92 -135.21 REMARK 500 ASN A 69 -20.29 67.47 REMARK 500 LEU A 81 -67.42 -108.70 REMARK 500 VAL A 101 -50.56 -126.64 REMARK 500 LEU A 108 -162.82 -101.31 REMARK 500 ASP A 145 0.75 -155.08 REMARK 500 LYS A 148 94.33 -62.57 REMARK 500 GLU A 151 67.14 -162.39 REMARK 500 HIS A 153 32.55 -147.25 REMARK 500 PHE A 224 -62.46 -93.69 REMARK 500 SER A 227 56.44 -67.62 REMARK 500 LEU A 229 85.96 -162.19 REMARK 500 PRO A 240 -75.34 -54.04 REMARK 500 GLU A 253 -132.22 58.49 REMARK 500 GLN A 266 -66.69 -91.28 REMARK 500 LEU A 267 11.18 -65.02 REMARK 500 GLN A 313 -51.79 -123.34 REMARK 500 ASN A 347 95.11 66.72 REMARK 500 LYS A 350 81.74 -152.56 REMARK 500 ASN A 390 -72.89 64.81 REMARK 500 GLU A 392 82.94 -65.33 REMARK 500 ASP A 405 67.28 -110.71 REMARK 500 GLN A 481 108.97 -166.94 REMARK 500 LEU A 490 72.14 -161.08 REMARK 500 HIS A 496 19.44 56.26 REMARK 500 ARG A 509 96.39 -68.76 REMARK 500 GLN A 554 -9.07 68.01 REMARK 500 LEU A 561 32.12 -70.02 REMARK 500 PRO A 590 -167.05 -71.95 REMARK 500 SER A 593 -8.79 -56.59 REMARK 500 GLU A 601 -110.42 40.00 REMARK 500 PHE A 603 -101.72 -124.23 REMARK 500 ASP A 612 -123.03 50.86 REMARK 500 ARG A 630 95.47 -57.07 REMARK 500 HIS A 688 -84.18 -92.99 REMARK 500 REMARK 500 REMARK: NULL DBREF 7Y4P A 27 708 UNP Q9UIW2 PLXA1_HUMAN 27 708 SEQADV 7Y4P GLY A 25 UNP Q9UIW2 EXPRESSION TAG SEQADV 7Y4P ARG A 26 UNP Q9UIW2 EXPRESSION TAG SEQADV 7Y4P SER A 709 UNP Q9UIW2 EXPRESSION TAG SEQADV 7Y4P ARG A 710 UNP Q9UIW2 EXPRESSION TAG SEQADV 7Y4P LEU A 711 UNP Q9UIW2 EXPRESSION TAG SEQADV 7Y4P GLU A 712 UNP Q9UIW2 EXPRESSION TAG SEQADV 7Y4P ASN A 713 UNP Q9UIW2 EXPRESSION TAG SEQADV 7Y4P LEU A 714 UNP Q9UIW2 EXPRESSION TAG SEQADV 7Y4P TYR A 715 UNP Q9UIW2 EXPRESSION TAG SEQADV 7Y4P PHE A 716 UNP Q9UIW2 EXPRESSION TAG SEQADV 7Y4P GLN A 717 UNP Q9UIW2 EXPRESSION TAG SEQRES 1 A 693 GLY ARG GLU ALA GLY LEU PRO ARG ALA GLY GLY GLY SER SEQRES 2 A 693 GLN PRO PRO PHE ARG THR PHE SER ALA SER ASP TRP GLY SEQRES 3 A 693 LEU THR HIS LEU VAL VAL HIS GLU GLN THR GLY GLU VAL SEQRES 4 A 693 TYR VAL GLY ALA VAL ASN ARG ILE TYR LYS LEU SER GLY SEQRES 5 A 693 ASN LEU THR LEU LEU ARG ALA HIS VAL THR GLY PRO VAL SEQRES 6 A 693 GLU ASP ASN GLU LYS CYS TYR PRO PRO PRO SER VAL GLN SEQRES 7 A 693 SER CYS PRO HIS GLY LEU GLY SER THR ASP ASN VAL ASN SEQRES 8 A 693 LYS LEU LEU LEU LEU ASP TYR ALA ALA ASN ARG LEU LEU SEQRES 9 A 693 ALA CYS GLY SER ALA SER GLN GLY ILE CYS GLN PHE LEU SEQRES 10 A 693 ARG LEU ASP ASP LEU PHE LYS LEU GLY GLU PRO HIS HIS SEQRES 11 A 693 ARG LYS GLU HIS TYR LEU SER SER VAL GLN GLU ALA GLY SEQRES 12 A 693 SER MET ALA GLY VAL LEU ILE ALA GLY PRO PRO GLY GLN SEQRES 13 A 693 GLY GLN ALA LYS LEU PHE VAL GLY THR PRO ILE ASP GLY SEQRES 14 A 693 LYS SER GLU TYR PHE PRO THR LEU SER SER ARG ARG LEU SEQRES 15 A 693 MET ALA ASN GLU GLU ASP ALA ASP MET PHE GLY PHE VAL SEQRES 16 A 693 TYR GLN ASP GLU PHE VAL SER SER GLN LEU LYS ILE PRO SEQRES 17 A 693 SER ASP THR LEU SER LYS PHE PRO ALA PHE ASP ILE TYR SEQRES 18 A 693 TYR VAL TYR SER PHE ARG SER GLU GLN PHE VAL TYR TYR SEQRES 19 A 693 LEU THR LEU GLN LEU ASP THR GLN LEU THR SER PRO ASP SEQRES 20 A 693 ALA ALA GLY GLU HIS PHE PHE THR SER LYS ILE VAL ARG SEQRES 21 A 693 LEU CYS VAL ASP ASP PRO LYS PHE TYR SER TYR VAL GLU SEQRES 22 A 693 PHE PRO ILE GLY CYS GLU GLN ALA GLY VAL GLU TYR ARG SEQRES 23 A 693 LEU VAL GLN ASP ALA TYR LEU SER ARG PRO GLY ARG ALA SEQRES 24 A 693 LEU ALA HIS GLN LEU GLY LEU ALA GLU ASP GLU ASP VAL SEQRES 25 A 693 LEU PHE THR VAL PHE ALA GLN GLY GLN LYS ASN ARG VAL SEQRES 26 A 693 LYS PRO PRO LYS GLU SER ALA LEU CYS LEU PHE THR LEU SEQRES 27 A 693 ARG ALA ILE LYS GLU LYS ILE LYS GLU ARG ILE GLN SER SEQRES 28 A 693 CYS TYR ARG GLY GLU GLY LYS LEU SER LEU PRO TRP LEU SEQRES 29 A 693 LEU ASN LYS GLU LEU GLY CYS ILE ASN SER PRO LEU GLN SEQRES 30 A 693 ILE ASP ASP ASP PHE CYS GLY GLN ASP PHE ASN GLN PRO SEQRES 31 A 693 LEU GLY GLY THR VAL THR ILE GLU GLY THR PRO LEU PHE SEQRES 32 A 693 VAL ASP LYS ASP ASP GLY LEU THR ALA VAL ALA ALA TYR SEQRES 33 A 693 ASP TYR ARG GLY ARG THR VAL VAL PHE ALA GLY THR ARG SEQRES 34 A 693 SER GLY ARG ILE ARG LYS ILE LEU VAL ASP LEU SER ASN SEQRES 35 A 693 PRO GLY GLY ARG PRO ALA LEU ALA TYR GLU SER VAL VAL SEQRES 36 A 693 ALA GLN GLU GLY SER PRO ILE LEU ARG ASP LEU VAL LEU SEQRES 37 A 693 SER PRO ASN HIS GLN TYR LEU TYR ALA MET THR GLU LYS SEQRES 38 A 693 GLN VAL THR ARG VAL PRO VAL GLU SER CYS VAL GLN TYR SEQRES 39 A 693 THR SER CYS GLU LEU CYS LEU GLY SER ARG ASP PRO HIS SEQRES 40 A 693 CYS GLY TRP CYS VAL LEU HIS SER ILE CYS SER ARG ARG SEQRES 41 A 693 ASP ALA CYS GLU ARG ALA ASP GLU PRO GLN ARG PHE ALA SEQRES 42 A 693 ALA ASP LEU LEU GLN CYS VAL GLN LEU THR VAL GLN PRO SEQRES 43 A 693 ARG ASN VAL SER VAL THR MET SER GLN VAL PRO LEU VAL SEQRES 44 A 693 LEU GLN ALA TRP ASN VAL PRO ASP LEU SER ALA GLY VAL SEQRES 45 A 693 ASN CYS SER PHE GLU ASP PHE THR GLU SER GLU SER VAL SEQRES 46 A 693 LEU GLU ASP GLY ARG ILE HIS CYS ARG SER PRO SER ALA SEQRES 47 A 693 ARG GLU VAL ALA PRO ILE THR ARG GLY GLN GLY ASP GLN SEQRES 48 A 693 ARG VAL VAL LYS LEU TYR LEU LYS SER LYS GLU THR GLY SEQRES 49 A 693 LYS LYS PHE ALA SER VAL ASP PHE VAL PHE TYR ASN CYS SEQRES 50 A 693 SER VAL HIS GLN SER CYS LEU SER CYS VAL ASN GLY SER SEQRES 51 A 693 PHE PRO CYS HIS TRP CYS LYS TYR ARG HIS VAL CYS THR SEQRES 52 A 693 HIS ASN VAL ALA ASP CYS ALA PHE LEU GLU GLY ARG VAL SEQRES 53 A 693 ASN VAL SER GLU ASP CYS PRO GLN SER ARG LEU GLU ASN SEQRES 54 A 693 LEU TYR PHE GLN HET NAG B 1 14 HET NAG B 2 14 HET NAG C 1 14 HET NAG C 2 14 HET NAG A3001 14 HET NAG A3002 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 2 NAG 6(C8 H15 N O6) HELIX 1 AA1 ARG A 155 TYR A 159 5 5 HELIX 2 AA2 PRO A 232 PHE A 239 1 8 HELIX 3 AA3 PRO A 320 GLY A 329 1 10 HELIX 4 AA4 LEU A 362 ILE A 373 1 12 HELIX 5 AA5 ILE A 373 ARG A 378 1 6 HELIX 6 AA6 SER A 514 TYR A 518 5 5 HELIX 7 AA7 SER A 520 LEU A 525 1 6 HELIX 8 AA8 GLY A 526 ARG A 528 5 3 HELIX 9 AA9 ASP A 559 CYS A 563 5 5 HELIX 10 AB1 ASP A 591 ALA A 594 5 4 HELIX 11 AB2 SER A 621 ARG A 630 1 10 HELIX 12 AB3 CYS A 661 HIS A 664 5 4 HELIX 13 AB4 SER A 666 ASN A 672 1 7 HELIX 14 AB5 ASN A 689 CYS A 693 5 5 HELIX 15 AB6 PHE A 695 GLU A 697 5 3 HELIX 16 AB7 VAL A 702 CYS A 706 5 5 SHEET 1 AA1 3 ARG A 42 SER A 45 0 SHEET 2 AA1 3 GLN A 506 PRO A 511 -1 O ARG A 509 N ARG A 42 SHEET 3 AA1 3 TYR A 498 MET A 502 -1 N LEU A 499 O VAL A 510 SHEET 1 AA2 4 LEU A 51 VAL A 56 0 SHEET 2 AA2 4 VAL A 63 ALA A 67 -1 O GLY A 66 N HIS A 53 SHEET 3 AA2 4 ARG A 70 LEU A 74 -1 O LEU A 74 N VAL A 63 SHEET 4 AA2 4 LEU A 80 VAL A 85 -1 O ARG A 82 N LYS A 73 SHEET 1 AA3 2 VAL A 89 GLU A 90 0 SHEET 2 AA3 2 SER A 110 THR A 111 -1 O THR A 111 N VAL A 89 SHEET 1 AA4 3 LEU A 117 ASP A 121 0 SHEET 2 AA4 3 ARG A 126 CYS A 130 -1 O LEU A 128 N LEU A 119 SHEET 3 AA4 3 CYS A 138 ARG A 142 -1 O GLN A 139 N ALA A 129 SHEET 1 AA5 3 ALA A 170 ALA A 175 0 SHEET 2 AA5 3 ALA A 183 GLY A 188 -1 O GLY A 188 N ALA A 170 SHEET 3 AA5 3 LEU A 201 LEU A 206 -1 O ARG A 204 N LEU A 185 SHEET 1 AA6 5 ILE A 244 SER A 252 0 SHEET 2 AA6 5 PHE A 255 LEU A 263 -1 O TYR A 257 N PHE A 250 SHEET 3 AA6 5 PHE A 278 CYS A 286 -1 O THR A 279 N GLN A 262 SHEET 4 AA6 5 VAL A 296 GLN A 304 -1 O PHE A 298 N ILE A 282 SHEET 5 AA6 5 ILE A 421 GLU A 422 1 O ILE A 421 N PRO A 299 SHEET 1 AA7 8 ILE A 244 SER A 252 0 SHEET 2 AA7 8 PHE A 255 LEU A 263 -1 O TYR A 257 N PHE A 250 SHEET 3 AA7 8 PHE A 278 CYS A 286 -1 O THR A 279 N GLN A 262 SHEET 4 AA7 8 VAL A 296 GLN A 304 -1 O PHE A 298 N ILE A 282 SHEET 5 AA7 8 VAL A 307 SER A 318 -1 O TYR A 309 N CYS A 302 SHEET 6 AA7 8 VAL A 336 GLN A 343 -1 O PHE A 338 N TYR A 316 SHEET 7 AA7 8 SER A 355 THR A 361 -1 O PHE A 360 N LEU A 337 SHEET 8 AA7 8 THR A 424 ASP A 429 -1 O THR A 424 N LEU A 359 SHEET 1 AA8 4 LEU A 434 TYR A 442 0 SHEET 2 AA8 4 ARG A 445 THR A 452 -1 O ARG A 445 N TYR A 442 SHEET 3 AA8 4 ARG A 456 VAL A 462 -1 O ILE A 460 N VAL A 448 SHEET 4 AA8 4 ALA A 472 VAL A 479 -1 O VAL A 478 N ILE A 457 SHEET 1 AA9 3 ILE A 540 SER A 542 0 SHEET 2 AA9 3 GLY A 533 CYS A 535 -1 N CYS A 535 O ILE A 540 SHEET 3 AA9 3 PHE A 556 ALA A 557 -1 N ALA A 557 O TRP A 534 SHEET 1 AB1 4 GLN A 565 GLN A 569 0 SHEET 2 AB1 4 PRO A 581 TRP A 587 -1 O TRP A 587 N GLN A 565 SHEET 3 AB1 4 ARG A 614 ARG A 618 -1 O ILE A 615 N LEU A 584 SHEET 4 AB1 4 VAL A 609 GLU A 611 -1 N GLU A 611 O ARG A 614 SHEET 1 AB2 5 ASN A 572 SER A 574 0 SHEET 2 AB2 5 LYS A 650 TYR A 659 1 O VAL A 657 N VAL A 573 SHEET 3 AB2 5 GLN A 635 SER A 644 -1 N VAL A 638 O PHE A 656 SHEET 4 AB2 5 VAL A 596 PHE A 600 -1 N ASN A 597 O LYS A 643 SHEET 5 AB2 5 GLU A 605 GLU A 607 -1 O SER A 606 N CYS A 598 SHEET 1 AB3 3 VAL A 685 THR A 687 0 SHEET 2 AB3 3 HIS A 678 CYS A 680 -1 N CYS A 680 O VAL A 685 SHEET 3 AB3 3 ARG A 699 VAL A 700 -1 O VAL A 700 N TRP A 679 SSBOND 1 CYS A 95 CYS A 104 1555 1555 2.03 SSBOND 2 CYS A 130 CYS A 138 1555 1555 2.03 SSBOND 3 CYS A 286 CYS A 407 1555 1555 2.04 SSBOND 4 CYS A 302 CYS A 358 1555 1555 2.04 SSBOND 5 CYS A 376 CYS A 395 1555 1555 2.03 SSBOND 6 CYS A 515 CYS A 532 1555 1555 2.04 SSBOND 7 CYS A 521 CYS A 563 1555 1555 2.04 SSBOND 8 CYS A 524 CYS A 541 1555 1555 2.03 SSBOND 9 CYS A 535 CYS A 547 1555 1555 2.03 SSBOND 10 CYS A 598 CYS A 617 1555 1555 2.04 SSBOND 11 CYS A 661 CYS A 677 1555 1555 2.04 SSBOND 12 CYS A 667 CYS A 706 1555 1555 2.03 SSBOND 13 CYS A 670 CYS A 686 1555 1555 2.03 SSBOND 14 CYS A 680 CYS A 693 1555 1555 2.03 LINK ND2 ASN A 77 C1 NAG A3002 1555 1555 1.44 LINK ND2 ASN A 572 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN A 597 C1 NAG A3001 1555 1555 1.45 LINK ND2 ASN A 660 C1 NAG B 1 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 CISPEP 1 GLY A 87 PRO A 88 0 -0.18 CISPEP 2 TYR A 96 PRO A 97 0 -5.25 CISPEP 3 GLN A 413 PRO A 414 0 0.74 CISPEP 4 GLN A 569 PRO A 570 0 -0.64 CRYST1 224.774 224.774 205.040 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004449 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004449 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004877 0.00000