HEADER DNA BINDING PROTEIN/DNA 17-JUN-22 7Y5W TITLE CRYO-EM STRUCTURE OF THE LEFT-HANDED DI-TETRASOME COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE H3.1; COMPND 3 CHAIN: A, C, E, G; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HISTONE H4; COMPND 7 CHAIN: B, D, F, H; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: WIDOM 601 DNA (147-MER); COMPND 11 CHAIN: I; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: WIDOM 601 DNA (147-MER); COMPND 15 CHAIN: J; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 16 ORGANISM_TAXID: 32630; SOURCE 17 MOL_ID: 4; SOURCE 18 SYNTHETIC: YES; SOURCE 19 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 20 ORGANISM_TAXID: 32630 KEYWDS LEFT-HANDED, DI-TETRASOME, DNA BINDING PROTEIN, DNA BINDING PROTEIN- KEYWDS 2 DNA COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR C.P.LIU,Z.Y.YU,C.YU,R.M.XU REVDAT 3 06-SEP-23 7Y5W 1 JRNL REVDAT 2 30-AUG-23 7Y5W 1 REMARK REVDAT 1 16-AUG-23 7Y5W 0 JRNL AUTH C.P.LIU,Z.YU,J.XIONG,J.HU,A.SONG,D.DING,C.YU,N.YANG,M.WANG, JRNL AUTH 2 J.YU,P.HOU,K.ZENG,Z.LI,Z.ZHANG,X.ZHANG,W.LI,Z.ZHANG,B.ZHU, JRNL AUTH 3 G.LI,R.M.XU JRNL TITL STRUCTURAL INSIGHTS INTO HISTONE BINDING AND NUCLEOSOME JRNL TITL 2 ASSEMBLY BY CHROMATIN ASSEMBLY FACTOR-1. JRNL REF SCIENCE V. 381 D8673 2023 JRNL REFN ESSN 1095-9203 JRNL PMID 37616371 JRNL DOI 10.1126/SCIENCE.ADD8673 REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : UCSF CHIMERA, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : CORRELATION COEFFICIENT REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.500 REMARK 3 NUMBER OF PARTICLES : 335568 REMARK 3 CTF CORRECTION METHOD : NONE REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7Y5W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1300030333. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : A LEFT-HANDED DI-TETRASOME; H3 REMARK 245 -H4; DNA REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.40 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TECNAI ARCTICA REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1200.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DECAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 ALA A 1 REMARK 465 ARG A 2 REMARK 465 THR A 3 REMARK 465 LYS A 4 REMARK 465 GLN A 5 REMARK 465 THR A 6 REMARK 465 ALA A 7 REMARK 465 ARG A 8 REMARK 465 LYS A 9 REMARK 465 SER A 10 REMARK 465 THR A 11 REMARK 465 GLY A 12 REMARK 465 GLY A 13 REMARK 465 LYS A 14 REMARK 465 ALA A 15 REMARK 465 PRO A 16 REMARK 465 ARG A 17 REMARK 465 LYS A 18 REMARK 465 GLN A 19 REMARK 465 LEU A 20 REMARK 465 ALA A 21 REMARK 465 THR A 22 REMARK 465 LYS A 23 REMARK 465 ALA A 24 REMARK 465 ALA A 25 REMARK 465 ARG A 26 REMARK 465 LYS A 27 REMARK 465 SER A 28 REMARK 465 ALA A 29 REMARK 465 PRO A 30 REMARK 465 ALA A 31 REMARK 465 THR A 32 REMARK 465 GLY A 33 REMARK 465 GLY A 34 REMARK 465 VAL A 35 REMARK 465 LYS A 36 REMARK 465 LYS A 37 REMARK 465 PRO A 38 REMARK 465 HIS A 39 REMARK 465 ARG A 40 REMARK 465 TYR A 41 REMARK 465 ARG A 42 REMARK 465 PRO A 43 REMARK 465 GLY A 44 REMARK 465 THR A 45 REMARK 465 VAL A 46 REMARK 465 ALA A 47 REMARK 465 LEU A 48 REMARK 465 ARG A 49 REMARK 465 GLU A 50 REMARK 465 ILE A 51 REMARK 465 ARG A 52 REMARK 465 ARG A 53 REMARK 465 TYR A 54 REMARK 465 GLN A 55 REMARK 465 LYS A 56 REMARK 465 SER A 57 REMARK 465 THR A 58 REMARK 465 ALA A 135 REMARK 465 MET B 0 REMARK 465 SER B 1 REMARK 465 GLY B 2 REMARK 465 ARG B 3 REMARK 465 GLY B 4 REMARK 465 LYS B 5 REMARK 465 GLY B 6 REMARK 465 GLY B 7 REMARK 465 LYS B 8 REMARK 465 GLY B 9 REMARK 465 LEU B 10 REMARK 465 GLY B 11 REMARK 465 LYS B 12 REMARK 465 GLY B 13 REMARK 465 GLY B 14 REMARK 465 ALA B 15 REMARK 465 LYS B 16 REMARK 465 ARG B 17 REMARK 465 HIS B 18 REMARK 465 ARG B 19 REMARK 465 LYS B 20 REMARK 465 VAL B 21 REMARK 465 LEU B 22 REMARK 465 ARG B 23 REMARK 465 GLY B 94 REMARK 465 ARG B 95 REMARK 465 THR B 96 REMARK 465 LEU B 97 REMARK 465 TYR B 98 REMARK 465 GLY B 99 REMARK 465 PHE B 100 REMARK 465 GLY B 101 REMARK 465 GLY B 102 REMARK 465 MET C 0 REMARK 465 ALA C 1 REMARK 465 ARG C 2 REMARK 465 THR C 3 REMARK 465 LYS C 4 REMARK 465 GLN C 5 REMARK 465 THR C 6 REMARK 465 ALA C 7 REMARK 465 ARG C 8 REMARK 465 LYS C 9 REMARK 465 SER C 10 REMARK 465 THR C 11 REMARK 465 GLY C 12 REMARK 465 GLY C 13 REMARK 465 LYS C 14 REMARK 465 ALA C 15 REMARK 465 PRO C 16 REMARK 465 ARG C 17 REMARK 465 LYS C 18 REMARK 465 GLN C 19 REMARK 465 LEU C 20 REMARK 465 ALA C 21 REMARK 465 THR C 22 REMARK 465 LYS C 23 REMARK 465 ALA C 24 REMARK 465 ALA C 25 REMARK 465 ARG C 26 REMARK 465 LYS C 27 REMARK 465 SER C 28 REMARK 465 ALA C 29 REMARK 465 PRO C 30 REMARK 465 ALA C 31 REMARK 465 THR C 32 REMARK 465 GLY C 33 REMARK 465 GLY C 34 REMARK 465 VAL C 35 REMARK 465 LYS C 36 REMARK 465 LYS C 37 REMARK 465 PRO C 38 REMARK 465 HIS C 39 REMARK 465 ARG C 40 REMARK 465 TYR C 41 REMARK 465 ARG C 42 REMARK 465 PRO C 43 REMARK 465 GLY C 44 REMARK 465 THR C 45 REMARK 465 VAL C 46 REMARK 465 ALA C 47 REMARK 465 LEU C 48 REMARK 465 ARG C 49 REMARK 465 GLU C 50 REMARK 465 ILE C 51 REMARK 465 ARG C 52 REMARK 465 ARG C 53 REMARK 465 TYR C 54 REMARK 465 GLN C 55 REMARK 465 LYS C 56 REMARK 465 SER C 57 REMARK 465 THR C 58 REMARK 465 ARG C 134 REMARK 465 ALA C 135 REMARK 465 MET D 0 REMARK 465 SER D 1 REMARK 465 GLY D 2 REMARK 465 ARG D 3 REMARK 465 GLY D 4 REMARK 465 LYS D 5 REMARK 465 GLY D 6 REMARK 465 GLY D 7 REMARK 465 LYS D 8 REMARK 465 GLY D 9 REMARK 465 LEU D 10 REMARK 465 GLY D 11 REMARK 465 LYS D 12 REMARK 465 GLY D 13 REMARK 465 GLY D 14 REMARK 465 ALA D 15 REMARK 465 LYS D 16 REMARK 465 ARG D 17 REMARK 465 HIS D 18 REMARK 465 ARG D 19 REMARK 465 LYS D 20 REMARK 465 VAL D 21 REMARK 465 LEU D 22 REMARK 465 ARG D 23 REMARK 465 THR D 96 REMARK 465 LEU D 97 REMARK 465 TYR D 98 REMARK 465 GLY D 99 REMARK 465 PHE D 100 REMARK 465 GLY D 101 REMARK 465 GLY D 102 REMARK 465 MET E 0 REMARK 465 ALA E 1 REMARK 465 ARG E 2 REMARK 465 THR E 3 REMARK 465 LYS E 4 REMARK 465 GLN E 5 REMARK 465 THR E 6 REMARK 465 ALA E 7 REMARK 465 ARG E 8 REMARK 465 LYS E 9 REMARK 465 SER E 10 REMARK 465 THR E 11 REMARK 465 GLY E 12 REMARK 465 GLY E 13 REMARK 465 LYS E 14 REMARK 465 ALA E 15 REMARK 465 PRO E 16 REMARK 465 ARG E 17 REMARK 465 LYS E 18 REMARK 465 GLN E 19 REMARK 465 LEU E 20 REMARK 465 ALA E 21 REMARK 465 THR E 22 REMARK 465 LYS E 23 REMARK 465 ALA E 24 REMARK 465 ALA E 25 REMARK 465 ARG E 26 REMARK 465 LYS E 27 REMARK 465 SER E 28 REMARK 465 ALA E 29 REMARK 465 PRO E 30 REMARK 465 ALA E 31 REMARK 465 THR E 32 REMARK 465 GLY E 33 REMARK 465 GLY E 34 REMARK 465 VAL E 35 REMARK 465 LYS E 36 REMARK 465 LYS E 37 REMARK 465 PRO E 38 REMARK 465 HIS E 39 REMARK 465 ARG E 40 REMARK 465 TYR E 41 REMARK 465 ARG E 42 REMARK 465 PRO E 43 REMARK 465 GLY E 44 REMARK 465 THR E 45 REMARK 465 VAL E 46 REMARK 465 ALA E 47 REMARK 465 LEU E 48 REMARK 465 ARG E 49 REMARK 465 GLU E 50 REMARK 465 ILE E 51 REMARK 465 ARG E 52 REMARK 465 ARG E 53 REMARK 465 TYR E 54 REMARK 465 GLN E 55 REMARK 465 LYS E 56 REMARK 465 SER E 57 REMARK 465 ARG E 134 REMARK 465 ALA E 135 REMARK 465 MET F 0 REMARK 465 SER F 1 REMARK 465 GLY F 2 REMARK 465 ARG F 3 REMARK 465 GLY F 4 REMARK 465 LYS F 5 REMARK 465 GLY F 6 REMARK 465 GLY F 7 REMARK 465 LYS F 8 REMARK 465 GLY F 9 REMARK 465 LEU F 10 REMARK 465 GLY F 11 REMARK 465 LYS F 12 REMARK 465 GLY F 13 REMARK 465 GLY F 14 REMARK 465 ALA F 15 REMARK 465 LYS F 16 REMARK 465 ARG F 17 REMARK 465 HIS F 18 REMARK 465 ARG F 19 REMARK 465 LYS F 20 REMARK 465 VAL F 21 REMARK 465 LEU F 22 REMARK 465 ARG F 95 REMARK 465 THR F 96 REMARK 465 LEU F 97 REMARK 465 TYR F 98 REMARK 465 GLY F 99 REMARK 465 PHE F 100 REMARK 465 GLY F 101 REMARK 465 GLY F 102 REMARK 465 MET G 0 REMARK 465 ALA G 1 REMARK 465 ARG G 2 REMARK 465 THR G 3 REMARK 465 LYS G 4 REMARK 465 GLN G 5 REMARK 465 THR G 6 REMARK 465 ALA G 7 REMARK 465 ARG G 8 REMARK 465 LYS G 9 REMARK 465 SER G 10 REMARK 465 THR G 11 REMARK 465 GLY G 12 REMARK 465 GLY G 13 REMARK 465 LYS G 14 REMARK 465 ALA G 15 REMARK 465 PRO G 16 REMARK 465 ARG G 17 REMARK 465 LYS G 18 REMARK 465 GLN G 19 REMARK 465 LEU G 20 REMARK 465 ALA G 21 REMARK 465 THR G 22 REMARK 465 LYS G 23 REMARK 465 ALA G 24 REMARK 465 ALA G 25 REMARK 465 ARG G 26 REMARK 465 LYS G 27 REMARK 465 SER G 28 REMARK 465 ALA G 29 REMARK 465 PRO G 30 REMARK 465 ALA G 31 REMARK 465 THR G 32 REMARK 465 GLY G 33 REMARK 465 GLY G 34 REMARK 465 VAL G 35 REMARK 465 LYS G 36 REMARK 465 LYS G 37 REMARK 465 PRO G 38 REMARK 465 HIS G 39 REMARK 465 ARG G 40 REMARK 465 TYR G 41 REMARK 465 ARG G 42 REMARK 465 PRO G 43 REMARK 465 GLY G 44 REMARK 465 THR G 45 REMARK 465 VAL G 46 REMARK 465 ALA G 47 REMARK 465 LEU G 48 REMARK 465 ARG G 49 REMARK 465 GLU G 50 REMARK 465 ILE G 51 REMARK 465 ARG G 52 REMARK 465 ARG G 53 REMARK 465 TYR G 54 REMARK 465 GLN G 55 REMARK 465 LYS G 56 REMARK 465 SER G 57 REMARK 465 THR G 58 REMARK 465 GLU G 59 REMARK 465 LEU G 60 REMARK 465 ARG G 134 REMARK 465 ALA G 135 REMARK 465 MET H 0 REMARK 465 SER H 1 REMARK 465 GLY H 2 REMARK 465 ARG H 3 REMARK 465 GLY H 4 REMARK 465 LYS H 5 REMARK 465 GLY H 6 REMARK 465 GLY H 7 REMARK 465 LYS H 8 REMARK 465 GLY H 9 REMARK 465 LEU H 10 REMARK 465 GLY H 11 REMARK 465 LYS H 12 REMARK 465 GLY H 13 REMARK 465 GLY H 14 REMARK 465 ALA H 15 REMARK 465 LYS H 16 REMARK 465 ARG H 17 REMARK 465 HIS H 18 REMARK 465 ARG H 19 REMARK 465 LYS H 20 REMARK 465 VAL H 21 REMARK 465 LEU H 22 REMARK 465 ARG H 23 REMARK 465 ASP H 24 REMARK 465 ASN H 25 REMARK 465 ILE H 26 REMARK 465 GLN H 27 REMARK 465 GLY H 28 REMARK 465 GLY H 94 REMARK 465 ARG H 95 REMARK 465 THR H 96 REMARK 465 LEU H 97 REMARK 465 TYR H 98 REMARK 465 GLY H 99 REMARK 465 PHE H 100 REMARK 465 GLY H 101 REMARK 465 GLY H 102 REMARK 465 DC I 1 REMARK 465 DT I 2 REMARK 465 DG I 3 REMARK 465 DG I 4 REMARK 465 DA I 5 REMARK 465 DG I 6 REMARK 465 DA I 7 REMARK 465 DA I 8 REMARK 465 DT I 9 REMARK 465 DC I 10 REMARK 465 DC I 11 REMARK 465 DC I 12 REMARK 465 DG I 13 REMARK 465 DG I 14 REMARK 465 DT I 15 REMARK 465 DG I 16 REMARK 465 DC I 17 REMARK 465 DC I 18 REMARK 465 DG I 19 REMARK 465 DA I 20 REMARK 465 DG I 21 REMARK 465 DG I 22 REMARK 465 DC I 23 REMARK 465 DC I 24 REMARK 465 DG I 25 REMARK 465 DC I 26 REMARK 465 DT I 27 REMARK 465 DC I 28 REMARK 465 DA I 29 REMARK 465 DA I 30 REMARK 465 DT I 31 REMARK 465 DT I 32 REMARK 465 DT I 134 REMARK 465 DA I 135 REMARK 465 DT I 136 REMARK 465 DA I 137 REMARK 465 DT I 138 REMARK 465 DA I 139 REMARK 465 DC I 140 REMARK 465 DA I 141 REMARK 465 DT I 142 REMARK 465 DC I 143 REMARK 465 DC I 144 REMARK 465 DT I 145 REMARK 465 DG I 146 REMARK 465 DT I 147 REMARK 465 DA J 1 REMARK 465 DC J 2 REMARK 465 DA J 3 REMARK 465 DG J 4 REMARK 465 DG J 5 REMARK 465 DA J 6 REMARK 465 DT J 7 REMARK 465 DG J 8 REMARK 465 DT J 9 REMARK 465 DA J 10 REMARK 465 DT J 11 REMARK 465 DA J 12 REMARK 465 DT J 13 REMARK 465 DA J 14 REMARK 465 DA J 116 REMARK 465 DA J 117 REMARK 465 DT J 118 REMARK 465 DT J 119 REMARK 465 DG J 120 REMARK 465 DA J 121 REMARK 465 DG J 122 REMARK 465 DC J 123 REMARK 465 DG J 124 REMARK 465 DG J 125 REMARK 465 DC J 126 REMARK 465 DC J 127 REMARK 465 DT J 128 REMARK 465 DC J 129 REMARK 465 DG J 130 REMARK 465 DG J 131 REMARK 465 DC J 132 REMARK 465 DA J 133 REMARK 465 DC J 134 REMARK 465 DC J 135 REMARK 465 DG J 136 REMARK 465 DG J 137 REMARK 465 DG J 138 REMARK 465 DA J 139 REMARK 465 DT J 140 REMARK 465 DT J 141 REMARK 465 DC J 142 REMARK 465 DT J 143 REMARK 465 DC J 144 REMARK 465 DC J 145 REMARK 465 DA J 146 REMARK 465 DG J 147 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N2 DG I 34 O2 DC J 114 2.10 REMARK 500 N2 DG I 33 O2 DC J 115 2.12 REMARK 500 N2 DG I 85 O2 DC J 63 2.14 REMARK 500 O2 DC I 82 N2 DG J 66 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT I 105 O4' - C1' - N1 ANGL. DEV. = 2.8 DEGREES REMARK 500 DC I 107 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC J 48 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 79 115.57 -161.47 REMARK 500 ASP A 81 60.59 60.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-33627 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF THE LEFT-HANDED DI-TETRASOME DBREF 7Y5W A 0 135 UNP P68431 H31_HUMAN 1 136 DBREF 7Y5W B 0 102 UNP P62805 H4_HUMAN 1 103 DBREF 7Y5W C 0 135 UNP P68431 H31_HUMAN 1 136 DBREF 7Y5W D 0 102 UNP P62805 H4_HUMAN 1 103 DBREF 7Y5W E 0 135 UNP P68431 H31_HUMAN 1 136 DBREF 7Y5W F 0 102 UNP P62805 H4_HUMAN 1 103 DBREF 7Y5W G 0 135 UNP P68431 H31_HUMAN 1 136 DBREF 7Y5W H 0 102 UNP P62805 H4_HUMAN 1 103 DBREF 7Y5W I 1 147 PDB 7Y5W 7Y5W 1 147 DBREF 7Y5W J 1 147 PDB 7Y5W 7Y5W 1 147 SEQRES 1 A 136 MET ALA ARG THR LYS GLN THR ALA ARG LYS SER THR GLY SEQRES 2 A 136 GLY LYS ALA PRO ARG LYS GLN LEU ALA THR LYS ALA ALA SEQRES 3 A 136 ARG LYS SER ALA PRO ALA THR GLY GLY VAL LYS LYS PRO SEQRES 4 A 136 HIS ARG TYR ARG PRO GLY THR VAL ALA LEU ARG GLU ILE SEQRES 5 A 136 ARG ARG TYR GLN LYS SER THR GLU LEU LEU ILE ARG LYS SEQRES 6 A 136 LEU PRO PHE GLN ARG LEU VAL ARG GLU ILE ALA GLN ASP SEQRES 7 A 136 PHE LYS THR ASP LEU ARG PHE GLN SER SER ALA VAL MET SEQRES 8 A 136 ALA LEU GLN GLU ALA CYS GLU ALA TYR LEU VAL GLY LEU SEQRES 9 A 136 PHE GLU ASP THR ASN LEU CYS ALA ILE HIS ALA LYS ARG SEQRES 10 A 136 VAL THR ILE MET PRO LYS ASP ILE GLN LEU ALA ARG ARG SEQRES 11 A 136 ILE ARG GLY GLU ARG ALA SEQRES 1 B 103 MET SER GLY ARG GLY LYS GLY GLY LYS GLY LEU GLY LYS SEQRES 2 B 103 GLY GLY ALA LYS ARG HIS ARG LYS VAL LEU ARG ASP ASN SEQRES 3 B 103 ILE GLN GLY ILE THR LYS PRO ALA ILE ARG ARG LEU ALA SEQRES 4 B 103 ARG ARG GLY GLY VAL LYS ARG ILE SER GLY LEU ILE TYR SEQRES 5 B 103 GLU GLU THR ARG GLY VAL LEU LYS VAL PHE LEU GLU ASN SEQRES 6 B 103 VAL ILE ARG ASP ALA VAL THR TYR THR GLU HIS ALA LYS SEQRES 7 B 103 ARG LYS THR VAL THR ALA MET ASP VAL VAL TYR ALA LEU SEQRES 8 B 103 LYS ARG GLN GLY ARG THR LEU TYR GLY PHE GLY GLY SEQRES 1 C 136 MET ALA ARG THR LYS GLN THR ALA ARG LYS SER THR GLY SEQRES 2 C 136 GLY LYS ALA PRO ARG LYS GLN LEU ALA THR LYS ALA ALA SEQRES 3 C 136 ARG LYS SER ALA PRO ALA THR GLY GLY VAL LYS LYS PRO SEQRES 4 C 136 HIS ARG TYR ARG PRO GLY THR VAL ALA LEU ARG GLU ILE SEQRES 5 C 136 ARG ARG TYR GLN LYS SER THR GLU LEU LEU ILE ARG LYS SEQRES 6 C 136 LEU PRO PHE GLN ARG LEU VAL ARG GLU ILE ALA GLN ASP SEQRES 7 C 136 PHE LYS THR ASP LEU ARG PHE GLN SER SER ALA VAL MET SEQRES 8 C 136 ALA LEU GLN GLU ALA CYS GLU ALA TYR LEU VAL GLY LEU SEQRES 9 C 136 PHE GLU ASP THR ASN LEU CYS ALA ILE HIS ALA LYS ARG SEQRES 10 C 136 VAL THR ILE MET PRO LYS ASP ILE GLN LEU ALA ARG ARG SEQRES 11 C 136 ILE ARG GLY GLU ARG ALA SEQRES 1 D 103 MET SER GLY ARG GLY LYS GLY GLY LYS GLY LEU GLY LYS SEQRES 2 D 103 GLY GLY ALA LYS ARG HIS ARG LYS VAL LEU ARG ASP ASN SEQRES 3 D 103 ILE GLN GLY ILE THR LYS PRO ALA ILE ARG ARG LEU ALA SEQRES 4 D 103 ARG ARG GLY GLY VAL LYS ARG ILE SER GLY LEU ILE TYR SEQRES 5 D 103 GLU GLU THR ARG GLY VAL LEU LYS VAL PHE LEU GLU ASN SEQRES 6 D 103 VAL ILE ARG ASP ALA VAL THR TYR THR GLU HIS ALA LYS SEQRES 7 D 103 ARG LYS THR VAL THR ALA MET ASP VAL VAL TYR ALA LEU SEQRES 8 D 103 LYS ARG GLN GLY ARG THR LEU TYR GLY PHE GLY GLY SEQRES 1 E 136 MET ALA ARG THR LYS GLN THR ALA ARG LYS SER THR GLY SEQRES 2 E 136 GLY LYS ALA PRO ARG LYS GLN LEU ALA THR LYS ALA ALA SEQRES 3 E 136 ARG LYS SER ALA PRO ALA THR GLY GLY VAL LYS LYS PRO SEQRES 4 E 136 HIS ARG TYR ARG PRO GLY THR VAL ALA LEU ARG GLU ILE SEQRES 5 E 136 ARG ARG TYR GLN LYS SER THR GLU LEU LEU ILE ARG LYS SEQRES 6 E 136 LEU PRO PHE GLN ARG LEU VAL ARG GLU ILE ALA GLN ASP SEQRES 7 E 136 PHE LYS THR ASP LEU ARG PHE GLN SER SER ALA VAL MET SEQRES 8 E 136 ALA LEU GLN GLU ALA CYS GLU ALA TYR LEU VAL GLY LEU SEQRES 9 E 136 PHE GLU ASP THR ASN LEU CYS ALA ILE HIS ALA LYS ARG SEQRES 10 E 136 VAL THR ILE MET PRO LYS ASP ILE GLN LEU ALA ARG ARG SEQRES 11 E 136 ILE ARG GLY GLU ARG ALA SEQRES 1 F 103 MET SER GLY ARG GLY LYS GLY GLY LYS GLY LEU GLY LYS SEQRES 2 F 103 GLY GLY ALA LYS ARG HIS ARG LYS VAL LEU ARG ASP ASN SEQRES 3 F 103 ILE GLN GLY ILE THR LYS PRO ALA ILE ARG ARG LEU ALA SEQRES 4 F 103 ARG ARG GLY GLY VAL LYS ARG ILE SER GLY LEU ILE TYR SEQRES 5 F 103 GLU GLU THR ARG GLY VAL LEU LYS VAL PHE LEU GLU ASN SEQRES 6 F 103 VAL ILE ARG ASP ALA VAL THR TYR THR GLU HIS ALA LYS SEQRES 7 F 103 ARG LYS THR VAL THR ALA MET ASP VAL VAL TYR ALA LEU SEQRES 8 F 103 LYS ARG GLN GLY ARG THR LEU TYR GLY PHE GLY GLY SEQRES 1 G 136 MET ALA ARG THR LYS GLN THR ALA ARG LYS SER THR GLY SEQRES 2 G 136 GLY LYS ALA PRO ARG LYS GLN LEU ALA THR LYS ALA ALA SEQRES 3 G 136 ARG LYS SER ALA PRO ALA THR GLY GLY VAL LYS LYS PRO SEQRES 4 G 136 HIS ARG TYR ARG PRO GLY THR VAL ALA LEU ARG GLU ILE SEQRES 5 G 136 ARG ARG TYR GLN LYS SER THR GLU LEU LEU ILE ARG LYS SEQRES 6 G 136 LEU PRO PHE GLN ARG LEU VAL ARG GLU ILE ALA GLN ASP SEQRES 7 G 136 PHE LYS THR ASP LEU ARG PHE GLN SER SER ALA VAL MET SEQRES 8 G 136 ALA LEU GLN GLU ALA CYS GLU ALA TYR LEU VAL GLY LEU SEQRES 9 G 136 PHE GLU ASP THR ASN LEU CYS ALA ILE HIS ALA LYS ARG SEQRES 10 G 136 VAL THR ILE MET PRO LYS ASP ILE GLN LEU ALA ARG ARG SEQRES 11 G 136 ILE ARG GLY GLU ARG ALA SEQRES 1 H 103 MET SER GLY ARG GLY LYS GLY GLY LYS GLY LEU GLY LYS SEQRES 2 H 103 GLY GLY ALA LYS ARG HIS ARG LYS VAL LEU ARG ASP ASN SEQRES 3 H 103 ILE GLN GLY ILE THR LYS PRO ALA ILE ARG ARG LEU ALA SEQRES 4 H 103 ARG ARG GLY GLY VAL LYS ARG ILE SER GLY LEU ILE TYR SEQRES 5 H 103 GLU GLU THR ARG GLY VAL LEU LYS VAL PHE LEU GLU ASN SEQRES 6 H 103 VAL ILE ARG ASP ALA VAL THR TYR THR GLU HIS ALA LYS SEQRES 7 H 103 ARG LYS THR VAL THR ALA MET ASP VAL VAL TYR ALA LEU SEQRES 8 H 103 LYS ARG GLN GLY ARG THR LEU TYR GLY PHE GLY GLY SEQRES 1 I 147 DC DT DG DG DA DG DA DA DT DC DC DC DG SEQRES 2 I 147 DG DT DG DC DC DG DA DG DG DC DC DG DC SEQRES 3 I 147 DT DC DA DA DT DT DG DG DT DC DG DT DA SEQRES 4 I 147 DG DA DC DA DG DC DT DC DT DA DG DC DA SEQRES 5 I 147 DC DC DG DC DT DT DA DA DA DC DG DC DA SEQRES 6 I 147 DC DG DT DA DC DG DC DG DC DT DG DT DC SEQRES 7 I 147 DC DC DC DC DG DC DG DT DT DT DT DA DA SEQRES 8 I 147 DC DC DG DC DC DA DA DG DG DG DG DA DT SEQRES 9 I 147 DT DA DC DT DC DC DC DT DA DG DT DC DT SEQRES 10 I 147 DC DC DA DG DG DC DA DC DG DT DG DT DC SEQRES 11 I 147 DA DC DA DT DA DT DA DT DA DC DA DT DC SEQRES 12 I 147 DC DT DG DT SEQRES 1 J 147 DA DC DA DG DG DA DT DG DT DA DT DA DT SEQRES 2 J 147 DA DT DG DT DG DA DC DA DC DG DT DG DC SEQRES 3 J 147 DC DT DG DG DA DG DA DC DT DA DG DG DG SEQRES 4 J 147 DA DG DT DA DA DT DC DC DC DC DT DT DG SEQRES 5 J 147 DG DC DG DG DT DT DA DA DA DA DC DG DC SEQRES 6 J 147 DG DG DG DG DG DA DC DA DG DC DG DC DG SEQRES 7 J 147 DT DA DC DG DT DG DC DG DT DT DT DA DA SEQRES 8 J 147 DG DC DG DG DT DG DC DT DA DG DA DG DC SEQRES 9 J 147 DT DG DT DC DT DA DC DG DA DC DC DA DA SEQRES 10 J 147 DT DT DG DA DG DC DG DG DC DC DT DC DG SEQRES 11 J 147 DG DC DA DC DC DG DG DG DA DT DT DC DT SEQRES 12 J 147 DC DC DA DG HELIX 1 AA1 ARG A 63 LYS A 79 1 17 HELIX 2 AA2 GLN A 85 ALA A 114 1 30 HELIX 3 AA3 MET A 120 ARG A 131 1 12 HELIX 4 AA4 ASN B 25 ILE B 29 5 5 HELIX 5 AA5 THR B 30 GLY B 41 1 12 HELIX 6 AA6 LEU B 49 ALA B 76 1 28 HELIX 7 AA7 THR B 82 ARG B 92 1 11 HELIX 8 AA8 ARG C 63 LYS C 79 1 17 HELIX 9 AA9 GLN C 85 ALA C 114 1 30 HELIX 10 AB1 MET C 120 ARG C 131 1 12 HELIX 11 AB2 THR D 30 GLY D 41 1 12 HELIX 12 AB3 SER D 47 ALA D 76 1 30 HELIX 13 AB4 THR D 82 GLY D 94 1 13 HELIX 14 AB5 ARG E 63 LYS E 79 1 17 HELIX 15 AB6 GLN E 85 ALA E 114 1 30 HELIX 16 AB7 MET E 120 GLY E 132 1 13 HELIX 17 AB8 ASN F 25 ILE F 29 5 5 HELIX 18 AB9 THR F 30 GLY F 41 1 12 HELIX 19 AC1 LEU F 49 ALA F 76 1 28 HELIX 20 AC2 THR F 82 GLN F 93 1 12 HELIX 21 AC3 ARG G 63 LYS G 79 1 17 HELIX 22 AC4 GLN G 85 ALA G 114 1 30 HELIX 23 AC5 MET G 120 GLY G 132 1 13 HELIX 24 AC6 THR H 30 GLY H 41 1 12 HELIX 25 AC7 LEU H 49 LYS H 77 1 29 HELIX 26 AC8 THR H 82 ARG H 92 1 11 SHEET 1 AA1 2 THR A 118 ILE A 119 0 SHEET 2 AA1 2 ARG B 45 ILE B 46 1 O ARG B 45 N ILE A 119 SHEET 1 AA2 2 ARG C 83 PHE C 84 0 SHEET 2 AA2 2 THR D 80 VAL D 81 1 O VAL D 81 N ARG C 83 SHEET 1 AA3 2 THR C 118 ILE C 119 0 SHEET 2 AA3 2 ARG D 45 ILE D 46 1 O ARG D 45 N ILE C 119 SHEET 1 AA4 2 ARG E 83 PHE E 84 0 SHEET 2 AA4 2 THR F 80 VAL F 81 1 O VAL F 81 N ARG E 83 SHEET 1 AA5 2 THR E 118 ILE E 119 0 SHEET 2 AA5 2 ARG F 45 ILE F 46 1 O ARG F 45 N ILE E 119 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000