HEADER HYDROLASE 18-JUN-22 7Y6A TITLE CRYSTAL STRUCTURE OF CHICKEN EGG LYSOZYME COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOZYME C; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 1,4-BETA-N-ACETYLMURAMIDASE C,ALLERGEN GAL D IV; COMPND 5 EC: 3.2.1.17 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031 KEYWDS CELL, ENZYME, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR H.DEMIRCI REVDAT 3 29-NOV-23 7Y6A 1 REMARK REVDAT 2 16-AUG-23 7Y6A 1 JRNL REVDAT 1 19-APR-23 7Y6A 0 JRNL AUTH N.ATALAY,E.K.AKCAN,M.GUL,E.AYAN,E.DESTAN,F.B.ERTEM,N.TOKAY, JRNL AUTH 2 B.CAKILKAYA,Z.NERGIZ,G.KARAKADIOGLU,A.KEPCEOGLU,I.YAPICI, JRNL AUTH 3 B.TOSUN,N.BALDIR,G.YILDIRIM,J.A.JOHNSON,O.GUVEN,A.SHAFIEI, JRNL AUTH 4 N.E.ARSLAN,M.YILMAZ,C.KULAKMAN,S.S.PAYDOS,Z.S.CINAL, JRNL AUTH 5 K.SABANOGLU,A.PAZARCEVIREN,A.YILMAZ,B.CANBAY,B.ASCI, JRNL AUTH 6 E.KARTAL,S.TAVLI,M.CALISEKI,G.GOC,A.MERMER,G.YESILAY, JRNL AUTH 7 S.ALTUNTAS,H.TATEISHI,M.OTSUKA,M.FUJITA,S.TEKIN,H.CIFTCI, JRNL AUTH 8 S.DURDAGI,G.DINLER DOGANAY,E.KARACA,B.KAPLAN TURKOZ, JRNL AUTH 9 B.V.KABASAKAL,A.KATI,H.DEMIRCI JRNL TITL CRYOGENIC X-RAY CRYSTALLOGRAPHIC STUDIES OF JRNL TITL 2 BIOMACROMOLECULES AT TURKISH LIGHT SOURCE " TURKISH DELIGHT JRNL TITL 3 ". JRNL REF TURK J BIOL V. 47 1 2023 JRNL REFN ISSN 1303-6092 JRNL PMID 37529114 JRNL DOI 10.55730/1300-0152.2637 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_3318 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.46 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.100 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 19182 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.540 REMARK 3 FREE R VALUE TEST SET COUNT : 679 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.4600 - 2.5642 1.00 3930 145 0.2173 0.2475 REMARK 3 2 2.5642 - 2.0356 1.00 3721 136 0.2275 0.2782 REMARK 3 3 2.0356 - 1.7784 0.99 3689 135 0.2206 0.2269 REMARK 3 4 1.7784 - 1.6158 0.99 3606 133 0.2265 0.2723 REMARK 3 5 1.6158 - 1.5000 0.97 3557 130 0.2275 0.2752 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.260 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.7338 -15.6604 -8.5131 REMARK 3 T TENSOR REMARK 3 T11: 0.1309 T22: 0.1494 REMARK 3 T33: 0.1658 T12: -0.0052 REMARK 3 T13: 0.0328 T23: 0.0772 REMARK 3 L TENSOR REMARK 3 L11: 4.2144 L22: 2.3155 REMARK 3 L33: 2.5595 L12: -0.1415 REMARK 3 L13: 0.3529 L23: 0.0133 REMARK 3 S TENSOR REMARK 3 S11: 0.2154 S12: 0.2855 S13: 0.0657 REMARK 3 S21: 0.0244 S22: -0.3737 S23: -0.3448 REMARK 3 S31: -0.1229 S32: 0.1473 S33: 0.1221 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 16 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.1686 -24.6738 2.3138 REMARK 3 T TENSOR REMARK 3 T11: 0.0926 T22: 0.1420 REMARK 3 T33: 0.1825 T12: -0.0114 REMARK 3 T13: -0.0141 T23: 0.0851 REMARK 3 L TENSOR REMARK 3 L11: 7.5515 L22: 8.6456 REMARK 3 L33: 1.0643 L12: 2.8155 REMARK 3 L13: 2.2701 L23: 2.1738 REMARK 3 S TENSOR REMARK 3 S11: -0.1188 S12: 0.0492 S13: 0.0050 REMARK 3 S21: 0.1886 S22: -0.1721 S23: -0.5903 REMARK 3 S31: -0.2425 S32: 0.4268 S33: 0.2205 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 25 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.3462 -24.2837 -4.8834 REMARK 3 T TENSOR REMARK 3 T11: 0.0978 T22: 0.1001 REMARK 3 T33: 0.0948 T12: -0.0015 REMARK 3 T13: 0.0215 T23: 0.0239 REMARK 3 L TENSOR REMARK 3 L11: 4.7940 L22: 2.5532 REMARK 3 L33: 1.4729 L12: -0.9324 REMARK 3 L13: 1.1848 L23: 0.2315 REMARK 3 S TENSOR REMARK 3 S11: 0.0102 S12: 0.0314 S13: 0.0122 REMARK 3 S21: 0.0432 S22: -0.0890 S23: 0.0250 REMARK 3 S31: 0.0115 S32: -0.0372 S33: 0.0758 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 37 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.3220 -17.2183 -0.4406 REMARK 3 T TENSOR REMARK 3 T11: 0.1072 T22: 0.0956 REMARK 3 T33: 0.1831 T12: 0.0237 REMARK 3 T13: 0.0170 T23: 0.0315 REMARK 3 L TENSOR REMARK 3 L11: 1.9800 L22: 1.5102 REMARK 3 L33: 7.2431 L12: -0.7735 REMARK 3 L13: -1.9662 L23: -0.0889 REMARK 3 S TENSOR REMARK 3 S11: -0.0649 S12: 0.1952 S13: -0.2371 REMARK 3 S21: 0.0514 S22: -0.0014 S23: 0.2771 REMARK 3 S31: 0.2005 S32: -0.4026 S33: 0.0619 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.9191 -16.8650 1.8260 REMARK 3 T TENSOR REMARK 3 T11: 0.1209 T22: 0.0987 REMARK 3 T33: 0.0860 T12: 0.0269 REMARK 3 T13: 0.0110 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 3.7251 L22: 7.2873 REMARK 3 L33: 5.4303 L12: -5.0997 REMARK 3 L13: -2.7055 L23: 3.4892 REMARK 3 S TENSOR REMARK 3 S11: -0.1553 S12: -0.3782 S13: -0.1006 REMARK 3 S21: 0.2037 S22: 0.2368 S23: -0.1021 REMARK 3 S31: 0.3095 S32: 0.2642 S33: -0.0558 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 59 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.4504 -15.1793 10.9399 REMARK 3 T TENSOR REMARK 3 T11: 0.1791 T22: 0.1705 REMARK 3 T33: 0.1286 T12: 0.0196 REMARK 3 T13: 0.0275 T23: 0.0148 REMARK 3 L TENSOR REMARK 3 L11: 6.4830 L22: 6.2235 REMARK 3 L33: 4.3374 L12: -4.5450 REMARK 3 L13: 2.5519 L23: -0.9120 REMARK 3 S TENSOR REMARK 3 S11: -0.3317 S12: -0.5503 S13: -0.1165 REMARK 3 S21: 0.4717 S22: 0.2325 S23: 0.1775 REMARK 3 S31: 0.2462 S32: -0.3488 S33: 0.0591 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 78 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.4903 -13.5087 14.4594 REMARK 3 T TENSOR REMARK 3 T11: 0.1784 T22: 0.1822 REMARK 3 T33: 0.1178 T12: 0.0438 REMARK 3 T13: -0.0214 T23: 0.0134 REMARK 3 L TENSOR REMARK 3 L11: 6.1166 L22: 2.2986 REMARK 3 L33: 5.3592 L12: -0.0298 REMARK 3 L13: 0.4778 L23: 0.5046 REMARK 3 S TENSOR REMARK 3 S11: -0.1614 S12: -0.7898 S13: 0.0242 REMARK 3 S21: 0.2850 S22: 0.0473 S23: -0.1456 REMARK 3 S31: 0.0751 S32: -0.0682 S33: 0.0776 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 79 THROUGH 88 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.4802 -8.8029 0.7119 REMARK 3 T TENSOR REMARK 3 T11: 0.1827 T22: 0.1383 REMARK 3 T33: 0.2415 T12: 0.0080 REMARK 3 T13: -0.0080 T23: 0.0422 REMARK 3 L TENSOR REMARK 3 L11: 2.4749 L22: 0.5110 REMARK 3 L33: 2.7480 L12: -1.0602 REMARK 3 L13: -2.4776 L23: 1.1892 REMARK 3 S TENSOR REMARK 3 S11: 0.0199 S12: 0.1612 S13: 0.3700 REMARK 3 S21: -0.1663 S22: -0.0364 S23: -0.1977 REMARK 3 S31: -0.3226 S32: -0.0105 S33: 0.0112 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 89 THROUGH 100 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8225 -17.0059 6.4225 REMARK 3 T TENSOR REMARK 3 T11: 0.1195 T22: 0.1022 REMARK 3 T33: 0.1065 T12: 0.0024 REMARK 3 T13: -0.0338 T23: -0.0138 REMARK 3 L TENSOR REMARK 3 L11: 7.5013 L22: 5.8818 REMARK 3 L33: 5.9843 L12: 1.1442 REMARK 3 L13: -1.7744 L23: -3.6097 REMARK 3 S TENSOR REMARK 3 S11: 0.0788 S12: -0.2722 S13: 0.1445 REMARK 3 S21: 0.6118 S22: -0.1278 S23: -0.2565 REMARK 3 S31: -0.2919 S32: 0.1832 S33: 0.0427 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 101 THROUGH 108 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.1733 -27.4383 7.4799 REMARK 3 T TENSOR REMARK 3 T11: 0.1747 T22: 0.1025 REMARK 3 T33: 0.0975 T12: 0.0231 REMARK 3 T13: 0.0214 T23: 0.0205 REMARK 3 L TENSOR REMARK 3 L11: 9.2912 L22: 3.4805 REMARK 3 L33: 4.1837 L12: -0.7106 REMARK 3 L13: 1.7766 L23: 0.7179 REMARK 3 S TENSOR REMARK 3 S11: -0.0488 S12: -0.4288 S13: -0.0539 REMARK 3 S21: 0.7061 S22: 0.1452 S23: 0.0673 REMARK 3 S31: -0.1873 S32: -0.3002 S33: -0.0835 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 109 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.5158 -30.9131 -0.7424 REMARK 3 T TENSOR REMARK 3 T11: 0.0706 T22: 0.1237 REMARK 3 T33: 0.0952 T12: -0.0121 REMARK 3 T13: 0.0127 T23: -0.0100 REMARK 3 L TENSOR REMARK 3 L11: 6.2293 L22: 7.3183 REMARK 3 L33: 2.2154 L12: -0.9353 REMARK 3 L13: 3.0443 L23: 1.8181 REMARK 3 S TENSOR REMARK 3 S11: 0.1163 S12: -0.4512 S13: 0.1167 REMARK 3 S21: 0.3800 S22: -0.1220 S23: 0.2474 REMARK 3 S31: 0.2120 S32: -0.3757 S33: -0.0047 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 123 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.5951 -31.7792 -7.7154 REMARK 3 T TENSOR REMARK 3 T11: 0.1282 T22: 0.1185 REMARK 3 T33: 0.1257 T12: 0.0432 REMARK 3 T13: 0.0347 T23: 0.0181 REMARK 3 L TENSOR REMARK 3 L11: 2.4547 L22: 3.4426 REMARK 3 L33: 4.6754 L12: 1.7417 REMARK 3 L13: -2.6929 L23: -1.7201 REMARK 3 S TENSOR REMARK 3 S11: -0.1552 S12: -0.0397 S13: -0.1155 REMARK 3 S21: -0.3007 S22: -0.1160 S23: -0.4577 REMARK 3 S31: 0.4181 S32: 0.4094 S33: 0.2627 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: ((CHAIN 'A' AND RESID 124 THROUGH 128) OR (CHAIN 'A' REMARK 3 AND RESID 201)) REMARK 3 ORIGIN FOR THE GROUP (A): 11.2259 -23.8195 -15.2585 REMARK 3 T TENSOR REMARK 3 T11: 0.1904 T22: 0.3324 REMARK 3 T33: 0.2128 T12: 0.0456 REMARK 3 T13: 0.0901 T23: -0.0354 REMARK 3 L TENSOR REMARK 3 L11: 9.2263 L22: 7.5904 REMARK 3 L33: 8.1769 L12: 0.8911 REMARK 3 L13: 1.1965 L23: 2.2532 REMARK 3 S TENSOR REMARK 3 S11: -0.1577 S12: 0.9060 S13: -0.3189 REMARK 3 S21: -0.9645 S22: -0.0171 S23: -0.6804 REMARK 3 S31: 0.0633 S32: 0.4770 S33: 0.1145 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7Y6A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1300030262. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU PHOTONJET-R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : RIGAKU HYPIX-3000 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSALISPRO REMARK 200 DATA SCALING SOFTWARE : CRYSALISPRO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19182 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 24.460 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3IJV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 31.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.09 M HEPES-NAOH PH 7.5, 1.26 M REMARK 280 SODIUM CITRATE TRIBASIC DIHYDRATE, 10% V/V GLYCEROL, MICROBATCH, REMARK 280 TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 19.40000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 38.67500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 38.67500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 29.10000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 38.67500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 38.67500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 9.70000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 38.67500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 38.67500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 29.10000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 38.67500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 38.67500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 9.70000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 19.40000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 346 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 425 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 433 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -17 REMARK 465 ARG A -16 REMARK 465 SER A -15 REMARK 465 LEU A -14 REMARK 465 LEU A -13 REMARK 465 ILE A -12 REMARK 465 LEU A -11 REMARK 465 VAL A -10 REMARK 465 LEU A -9 REMARK 465 CYS A -8 REMARK 465 PHE A -7 REMARK 465 LEU A -6 REMARK 465 PRO A -5 REMARK 465 LEU A -4 REMARK 465 ALA A -3 REMARK 465 ALA A -2 REMARK 465 LEU A -1 REMARK 465 GLY A 0 REMARK 465 LEU A 129 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 99 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 302 O HOH A 412 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 NO3 A 201 DBREF 7Y6A A -17 129 UNP P00698 LYSC_CHICK 1 147 SEQRES 1 A 147 MET ARG SER LEU LEU ILE LEU VAL LEU CYS PHE LEU PRO SEQRES 2 A 147 LEU ALA ALA LEU GLY LYS VAL PHE GLY ARG CYS GLU LEU SEQRES 3 A 147 ALA ALA ALA MET LYS ARG HIS GLY LEU ASP ASN TYR ARG SEQRES 4 A 147 GLY TYR SER LEU GLY ASN TRP VAL CYS ALA ALA LYS PHE SEQRES 5 A 147 GLU SER ASN PHE ASN THR GLN ALA THR ASN ARG ASN THR SEQRES 6 A 147 ASP GLY SER THR ASP TYR GLY ILE LEU GLN ILE ASN SER SEQRES 7 A 147 ARG TRP TRP CYS ASN ASP GLY ARG THR PRO GLY SER ARG SEQRES 8 A 147 ASN LEU CYS ASN ILE PRO CYS SER ALA LEU LEU SER SER SEQRES 9 A 147 ASP ILE THR ALA SER VAL ASN CYS ALA LYS LYS ILE VAL SEQRES 10 A 147 SER ASP GLY ASN GLY MET ASN ALA TRP VAL ALA TRP ARG SEQRES 11 A 147 ASN ARG CYS LYS GLY THR ASP VAL GLN ALA TRP ILE ARG SEQRES 12 A 147 GLY CYS ARG LEU HET NO3 A 201 4 HETNAM NO3 NITRATE ION FORMUL 2 NO3 N O3 1- FORMUL 3 HOH *134(H2 O) HELIX 1 AA1 GLY A 4 HIS A 15 1 12 HELIX 2 AA2 ASN A 19 TYR A 23 5 5 HELIX 3 AA3 SER A 24 ASN A 37 1 14 HELIX 4 AA4 PRO A 79 SER A 85 5 7 HELIX 5 AA5 ILE A 88 SER A 100 1 13 HELIX 6 AA6 ASN A 103 ALA A 107 5 5 HELIX 7 AA7 TRP A 108 CYS A 115 1 8 HELIX 8 AA8 ASP A 119 ARG A 125 5 7 SHEET 1 AA1 3 THR A 43 ARG A 45 0 SHEET 2 AA1 3 THR A 51 TYR A 53 -1 O ASP A 52 N ASN A 44 SHEET 3 AA1 3 ILE A 58 ASN A 59 -1 O ILE A 58 N TYR A 53 SSBOND 1 CYS A 6 CYS A 127 1555 1555 2.03 SSBOND 2 CYS A 30 CYS A 115 1555 1555 2.05 SSBOND 3 CYS A 64 CYS A 80 1555 1555 2.03 SSBOND 4 CYS A 76 CYS A 94 1555 1555 2.03 CRYST1 77.350 77.350 38.800 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012928 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012928 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025773 0.00000