data_7Y9I # _entry.id 7Y9I # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7Y9I pdb_00007y9i 10.2210/pdb7y9i/pdb WWPDB D_1300030518 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7Y9I _pdbx_database_status.recvd_initial_deposition_date 2022-06-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Li, X.' 1 ? 'Chen, Z.' 2 ? # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_patent _citation.unpublished_flag ? ? ? ? ? ? ? CH ? ? primary 'Front Mol Biosci' ? ? 2296-889X ? ? 9 ? 1061350 1061350 'Co-crystalization reveals the interaction between AtYchF1 and ppGpp.' 2022 ? 10.3389/fmolb.2022.1061350 36533075 ? ? ? ? ? ? ? ? ? US ? ? 1 Proc.Natl.Acad.Sci.USA PNASA6 0040 1091-6490 ? ? ? ? ? ? 'ATP binding by the P-loop NTPase OsYchF1 (an unconventional G protein) contributes to biotic but not abiotic stress responses' 2016 ? ? ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cheung, M.Y.' 1 ? primary 'Li, X.' 2 ? primary 'Ku, Y.S.' 3 ? primary 'Chen, Z.' 4 ? primary 'Lam, H.M.' 5 ? 1 'Cheung, M.-Y.' 6 ? 1 'Li, X.' 7 ? 1 'Miao, R.' 8 ? 1 'Fong, Y.-H.' 9 ? 1 'Li, K.-P.' 10 ? 1 'Yung, Y.-L.' 11 ? 1 'Yu, M.-H.' 12 ? 1 'Wong, K.-B.' 13 ? 1 'Chen, Z.' 14 ? 1 'Lam, M.-H.' 15 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7Y9I _cell.details ? _cell.formula_units_Z ? _cell.length_a 72.460 _cell.length_a_esd ? _cell.length_b 111.500 _cell.length_b_esd ? _cell.length_c 52.330 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 7Y9I _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Obg-like ATPase 1' 44536.027 1 3.6.5.- ? ? ? 2 non-polymer syn "GUANOSINE-5',3'-TETRAPHOSPHATE" 603.160 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 water nat water 18.015 61 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Ribosome-binding ATPase YchF,AtYchF1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MPPKAKAKDAGPVERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLSIPAENFPFCTIEPNEARVNIPDERFDWLCQTY KPKSEIPAFLEIHDIAGLVRGAHEGQGLGNNFLSHIRAVDGIFHVLRAFEDADIIHVDDIVDPVRDLETITEELRLKDIE FVGKKIDDVEKSMKRSNDKQLKIELELLQKVKAWLEDGKDVRFGDWKTADIEILNTFQLLSAKPVVYLINLNERDYQRKK NKFLPKIHAWVQEHGGDTMIPFSGVFERSLADMAPDEAAKYCEENKLQSALPRIIKTGFSAINLIYFFTAGPDEVKCWQI RRQSKAPQAAGAIHTDFERGFICAEVMKFEDLKELGNEPAVKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK ; _entity_poly.pdbx_seq_one_letter_code_can ;MPPKAKAKDAGPVERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLSIPAENFPFCTIEPNEARVNIPDERFDWLCQTY KPKSEIPAFLEIHDIAGLVRGAHEGQGLGNNFLSHIRAVDGIFHVLRAFEDADIIHVDDIVDPVRDLETITEELRLKDIE FVGKKIDDVEKSMKRSNDKQLKIELELLQKVKAWLEDGKDVRFGDWKTADIEILNTFQLLSAKPVVYLINLNERDYQRKK NKFLPKIHAWVQEHGGDTMIPFSGVFERSLADMAPDEAAKYCEENKLQSALPRIIKTGFSAINLIYFFTAGPDEVKCWQI RRQSKAPQAAGAIHTDFERGFICAEVMKFEDLKELGNEPAVKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 PRO n 1 3 PRO n 1 4 LYS n 1 5 ALA n 1 6 LYS n 1 7 ALA n 1 8 LYS n 1 9 ASP n 1 10 ALA n 1 11 GLY n 1 12 PRO n 1 13 VAL n 1 14 GLU n 1 15 ARG n 1 16 PRO n 1 17 ILE n 1 18 LEU n 1 19 GLY n 1 20 ARG n 1 21 PHE n 1 22 SER n 1 23 SER n 1 24 HIS n 1 25 LEU n 1 26 LYS n 1 27 ILE n 1 28 GLY n 1 29 ILE n 1 30 VAL n 1 31 GLY n 1 32 LEU n 1 33 PRO n 1 34 ASN n 1 35 VAL n 1 36 GLY n 1 37 LYS n 1 38 SER n 1 39 THR n 1 40 LEU n 1 41 PHE n 1 42 ASN n 1 43 THR n 1 44 LEU n 1 45 THR n 1 46 LYS n 1 47 LEU n 1 48 SER n 1 49 ILE n 1 50 PRO n 1 51 ALA n 1 52 GLU n 1 53 ASN n 1 54 PHE n 1 55 PRO n 1 56 PHE n 1 57 CYS n 1 58 THR n 1 59 ILE n 1 60 GLU n 1 61 PRO n 1 62 ASN n 1 63 GLU n 1 64 ALA n 1 65 ARG n 1 66 VAL n 1 67 ASN n 1 68 ILE n 1 69 PRO n 1 70 ASP n 1 71 GLU n 1 72 ARG n 1 73 PHE n 1 74 ASP n 1 75 TRP n 1 76 LEU n 1 77 CYS n 1 78 GLN n 1 79 THR n 1 80 TYR n 1 81 LYS n 1 82 PRO n 1 83 LYS n 1 84 SER n 1 85 GLU n 1 86 ILE n 1 87 PRO n 1 88 ALA n 1 89 PHE n 1 90 LEU n 1 91 GLU n 1 92 ILE n 1 93 HIS n 1 94 ASP n 1 95 ILE n 1 96 ALA n 1 97 GLY n 1 98 LEU n 1 99 VAL n 1 100 ARG n 1 101 GLY n 1 102 ALA n 1 103 HIS n 1 104 GLU n 1 105 GLY n 1 106 GLN n 1 107 GLY n 1 108 LEU n 1 109 GLY n 1 110 ASN n 1 111 ASN n 1 112 PHE n 1 113 LEU n 1 114 SER n 1 115 HIS n 1 116 ILE n 1 117 ARG n 1 118 ALA n 1 119 VAL n 1 120 ASP n 1 121 GLY n 1 122 ILE n 1 123 PHE n 1 124 HIS n 1 125 VAL n 1 126 LEU n 1 127 ARG n 1 128 ALA n 1 129 PHE n 1 130 GLU n 1 131 ASP n 1 132 ALA n 1 133 ASP n 1 134 ILE n 1 135 ILE n 1 136 HIS n 1 137 VAL n 1 138 ASP n 1 139 ASP n 1 140 ILE n 1 141 VAL n 1 142 ASP n 1 143 PRO n 1 144 VAL n 1 145 ARG n 1 146 ASP n 1 147 LEU n 1 148 GLU n 1 149 THR n 1 150 ILE n 1 151 THR n 1 152 GLU n 1 153 GLU n 1 154 LEU n 1 155 ARG n 1 156 LEU n 1 157 LYS n 1 158 ASP n 1 159 ILE n 1 160 GLU n 1 161 PHE n 1 162 VAL n 1 163 GLY n 1 164 LYS n 1 165 LYS n 1 166 ILE n 1 167 ASP n 1 168 ASP n 1 169 VAL n 1 170 GLU n 1 171 LYS n 1 172 SER n 1 173 MET n 1 174 LYS n 1 175 ARG n 1 176 SER n 1 177 ASN n 1 178 ASP n 1 179 LYS n 1 180 GLN n 1 181 LEU n 1 182 LYS n 1 183 ILE n 1 184 GLU n 1 185 LEU n 1 186 GLU n 1 187 LEU n 1 188 LEU n 1 189 GLN n 1 190 LYS n 1 191 VAL n 1 192 LYS n 1 193 ALA n 1 194 TRP n 1 195 LEU n 1 196 GLU n 1 197 ASP n 1 198 GLY n 1 199 LYS n 1 200 ASP n 1 201 VAL n 1 202 ARG n 1 203 PHE n 1 204 GLY n 1 205 ASP n 1 206 TRP n 1 207 LYS n 1 208 THR n 1 209 ALA n 1 210 ASP n 1 211 ILE n 1 212 GLU n 1 213 ILE n 1 214 LEU n 1 215 ASN n 1 216 THR n 1 217 PHE n 1 218 GLN n 1 219 LEU n 1 220 LEU n 1 221 SER n 1 222 ALA n 1 223 LYS n 1 224 PRO n 1 225 VAL n 1 226 VAL n 1 227 TYR n 1 228 LEU n 1 229 ILE n 1 230 ASN n 1 231 LEU n 1 232 ASN n 1 233 GLU n 1 234 ARG n 1 235 ASP n 1 236 TYR n 1 237 GLN n 1 238 ARG n 1 239 LYS n 1 240 LYS n 1 241 ASN n 1 242 LYS n 1 243 PHE n 1 244 LEU n 1 245 PRO n 1 246 LYS n 1 247 ILE n 1 248 HIS n 1 249 ALA n 1 250 TRP n 1 251 VAL n 1 252 GLN n 1 253 GLU n 1 254 HIS n 1 255 GLY n 1 256 GLY n 1 257 ASP n 1 258 THR n 1 259 MET n 1 260 ILE n 1 261 PRO n 1 262 PHE n 1 263 SER n 1 264 GLY n 1 265 VAL n 1 266 PHE n 1 267 GLU n 1 268 ARG n 1 269 SER n 1 270 LEU n 1 271 ALA n 1 272 ASP n 1 273 MET n 1 274 ALA n 1 275 PRO n 1 276 ASP n 1 277 GLU n 1 278 ALA n 1 279 ALA n 1 280 LYS n 1 281 TYR n 1 282 CYS n 1 283 GLU n 1 284 GLU n 1 285 ASN n 1 286 LYS n 1 287 LEU n 1 288 GLN n 1 289 SER n 1 290 ALA n 1 291 LEU n 1 292 PRO n 1 293 ARG n 1 294 ILE n 1 295 ILE n 1 296 LYS n 1 297 THR n 1 298 GLY n 1 299 PHE n 1 300 SER n 1 301 ALA n 1 302 ILE n 1 303 ASN n 1 304 LEU n 1 305 ILE n 1 306 TYR n 1 307 PHE n 1 308 PHE n 1 309 THR n 1 310 ALA n 1 311 GLY n 1 312 PRO n 1 313 ASP n 1 314 GLU n 1 315 VAL n 1 316 LYS n 1 317 CYS n 1 318 TRP n 1 319 GLN n 1 320 ILE n 1 321 ARG n 1 322 ARG n 1 323 GLN n 1 324 SER n 1 325 LYS n 1 326 ALA n 1 327 PRO n 1 328 GLN n 1 329 ALA n 1 330 ALA n 1 331 GLY n 1 332 ALA n 1 333 ILE n 1 334 HIS n 1 335 THR n 1 336 ASP n 1 337 PHE n 1 338 GLU n 1 339 ARG n 1 340 GLY n 1 341 PHE n 1 342 ILE n 1 343 CYS n 1 344 ALA n 1 345 GLU n 1 346 VAL n 1 347 MET n 1 348 LYS n 1 349 PHE n 1 350 GLU n 1 351 ASP n 1 352 LEU n 1 353 LYS n 1 354 GLU n 1 355 LEU n 1 356 GLY n 1 357 ASN n 1 358 GLU n 1 359 PRO n 1 360 ALA n 1 361 VAL n 1 362 LYS n 1 363 ALA n 1 364 ALA n 1 365 GLY n 1 366 LYS n 1 367 TYR n 1 368 ARG n 1 369 GLN n 1 370 GLU n 1 371 GLY n 1 372 LYS n 1 373 THR n 1 374 TYR n 1 375 VAL n 1 376 VAL n 1 377 GLN n 1 378 ASP n 1 379 GLY n 1 380 ASP n 1 381 ILE n 1 382 ILE n 1 383 PHE n 1 384 PHE n 1 385 LYS n 1 386 PHE n 1 387 ASN n 1 388 VAL n 1 389 SER n 1 390 GLY n 1 391 GLY n 1 392 GLY n 1 393 LYS n 1 394 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 394 _entity_src_gen.gene_src_common_name 'thale cress' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'YchF1, At1g30580, T5I8.3' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Arabidopsis thaliana' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3702 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code OLA1_ARATH _struct_ref.pdbx_db_accession Q9SA73 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MPPKAKAKDAGPVERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLSIPAENFPFCTIEPNEARVNIPDERFDWLCQTY KPKSEIPAFLEIHDIAGLVRGAHEGQGLGNNFLSHIRAVDGIFHVLRAFEDADIIHVDDIVDPVRDLETITEELRLKDIE FVGKKIDDVEKSMKRSNDKQLKIELELLQKVKAWLEDGKDVRFGDWKTADIEILNTFQLLSAKPVVYLINLNERDYQRKK NKFLPKIHAWVQEHGGDTMIPFSGVFERSLADMAPDEAAKYCEENKLQSALPRIIKTGFSAINLIYFFTAGPDEVKCWQI RRQSKAPQAAGAIHTDFERGFICAEVMKFEDLKELGNEPAVKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7Y9I _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 394 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9SA73 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 394 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 394 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G4P 'RNA linking' . "GUANOSINE-5',3'-TETRAPHOSPHATE" 'guanosine tetraphosphate;ppGpp' 'C10 H17 N5 O17 P4' 603.160 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7Y9I _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.55 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 51.83 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details PEG _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 113 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 2M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-03-24 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL17B1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL17B1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7Y9I _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.07 _reflns.d_resolution_low 50.01 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 26569 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 13.0 _reflns.pdbx_Rmerge_I_obs 0.073 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 18.8 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.028 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? _reflns.pdbx_CC_split_method ? # _reflns_shell.d_res_high 2.07 _reflns_shell.d_res_low 2.12 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1922 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.392 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] -2.630 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -0.000 _refine.aniso_B[2][2] -0.066 _refine.aniso_B[2][3] 0.000 _refine.aniso_B[3][3] 2.696 _refine.B_iso_max ? _refine.B_iso_mean 48.867 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.964 _refine.correlation_coeff_Fo_to_Fc_free 0.950 _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7Y9I _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.070 _refine.ls_d_res_low 50.005 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 26522 _refine.ls_number_reflns_R_free 1367 _refine.ls_number_reflns_R_work 25155 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.853 _refine.ls_percent_reflns_R_free 5.154 _refine.ls_R_factor_all 0.207 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.2355 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2056 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method NONE _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5EE0 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.199 _refine.pdbx_overall_ESU_R_Free 0.168 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 5.971 _refine.overall_SU_ML 0.149 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.070 _refine_hist.d_res_low 50.005 _refine_hist.number_atoms_solvent 61 _refine_hist.number_atoms_total 2883 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2785 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 37 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.006 0.013 2885 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.017 2701 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.425 1.658 3925 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.253 1.584 6182 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.521 5.000 360 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 31.320 22.029 138 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 13.223 15.000 463 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 18.727 15.000 17 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.059 0.200 392 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 0.020 3239 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 667 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 0.189 0.200 522 ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.165 0.200 2266 ? r_symmetry_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.158 0.200 1418 ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? 0.076 0.200 1297 ? r_symmetry_nbtor_other ? ? 'X-RAY DIFFRACTION' ? 0.148 0.200 68 ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.150 0.200 13 ? r_symmetry_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.177 0.200 60 ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.122 0.200 4 ? r_symmetry_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 3.080 5.149 1446 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 3.080 5.146 1445 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 4.339 7.713 1804 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 4.338 7.715 1805 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 3.675 5.487 1439 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 3.673 5.487 1438 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? 5.618 8.081 2121 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 5.618 8.082 2122 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 6.851 60.039 3098 ? r_lrange_it ? ? 'X-RAY DIFFRACTION' ? 6.828 60.006 3092 ? r_lrange_other ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.070 2.124 1923 . 97 1821 99.7400 . 0.328 . 0.348 . 0.327 . . . . . 0.308 . 20 . 0.707 0.662 'X-RAY DIFFRACTION' 2.124 2.182 1884 . 93 1788 99.8408 . 0.297 . 0.339 . 0.295 . . . . . 0.270 . 20 . 0.761 0.716 'X-RAY DIFFRACTION' 2.182 2.245 1811 . 106 1703 99.8896 . 0.288 . 0.335 . 0.286 . . . . . 0.253 . 20 . 0.808 0.769 'X-RAY DIFFRACTION' 2.245 2.314 1789 . 79 1706 99.7764 . 0.269 . 0.271 . 0.268 . . . . . 0.234 . 20 . 0.845 0.857 'X-RAY DIFFRACTION' 2.314 2.390 1720 . 80 1639 99.9419 . 0.256 . 0.316 . 0.253 . . . . . 0.223 . 20 . 0.877 0.844 'X-RAY DIFFRACTION' 2.390 2.473 1685 . 94 1589 99.8813 . 0.245 . 0.258 . 0.245 . . . . . 0.213 . 20 . 0.901 0.886 'X-RAY DIFFRACTION' 2.473 2.566 1613 . 82 1529 99.8760 . 0.255 . 0.349 . 0.251 . . . . . 0.216 . 20 . 0.906 0.871 'X-RAY DIFFRACTION' 2.566 2.671 1554 . 72 1479 99.8070 . 0.248 . 0.276 . 0.246 . . . . . 0.219 . 20 . 0.912 0.905 'X-RAY DIFFRACTION' 2.671 2.789 1510 . 71 1439 100.0000 . 0.239 . 0.312 . 0.235 . . . . . 0.205 . 20 . 0.924 0.900 'X-RAY DIFFRACTION' 2.789 2.925 1425 . 66 1356 99.7895 . 0.220 . 0.204 . 0.221 . . . . . 0.198 . 20 . 0.934 0.934 'X-RAY DIFFRACTION' 2.925 3.083 1382 . 77 1304 99.9276 . 0.236 . 0.232 . 0.237 . . . . . 0.221 . 20 . 0.917 0.914 'X-RAY DIFFRACTION' 3.083 3.269 1292 . 66 1224 99.8452 . 0.228 . 0.292 . 0.225 . . . . . 0.217 . 20 . 0.923 0.897 'X-RAY DIFFRACTION' 3.269 3.493 1228 . 67 1160 99.9186 . 0.217 . 0.277 . 0.213 . . . . . 0.212 . 20 . 0.939 0.913 'X-RAY DIFFRACTION' 3.493 3.772 1142 . 64 1078 100.0000 . 0.201 . 0.221 . 0.199 . . . . . 0.204 . 20 . 0.954 0.944 'X-RAY DIFFRACTION' 3.772 4.129 1055 . 56 999 100.0000 . 0.171 . 0.184 . 0.170 . . . . . 0.183 . 20 . 0.967 0.968 'X-RAY DIFFRACTION' 4.129 4.613 972 . 69 902 99.8971 . 0.147 . 0.175 . 0.145 . . . . . 0.166 . 20 . 0.976 0.969 'X-RAY DIFFRACTION' 4.613 5.319 875 . 47 828 100.0000 . 0.158 . 0.235 . 0.154 . . . . . 0.181 . 20 . 0.972 0.947 'X-RAY DIFFRACTION' 5.319 6.496 738 . 38 700 100.0000 . 0.216 . 0.170 . 0.219 . . . . . 0.251 . 20 . 0.949 0.953 'X-RAY DIFFRACTION' 6.496 9.110 593 . 28 564 99.8314 . 0.199 . 0.209 . 0.199 . . . . . 0.248 . 20 . 0.959 0.958 'X-RAY DIFFRACTION' 9.110 50.005 367 . 15 347 98.6376 . 0.170 . 0.234 . 0.167 . . . . . 0.232 . 20 . 0.974 0.957 # _struct.entry_id 7Y9I _struct.title 'Complex structure of AtYchF1 with ppGpp' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7Y9I _struct_keywords.text 'AtYchF1, GTP-BINDING PROTEIN, ppGpp, YchF-type, P-Loop NTPase, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 36 ? LEU A 47 ? GLY A 36 LEU A 47 1 ? 12 HELX_P HELX_P2 AA2 PRO A 50 ? PHE A 54 ? PRO A 50 PHE A 54 5 ? 5 HELX_P HELX_P3 AA3 ASP A 70 ? LYS A 81 ? ASP A 70 LYS A 81 1 ? 12 HELX_P HELX_P4 AA4 LEU A 113 ? VAL A 119 ? LEU A 113 VAL A 119 1 ? 7 HELX_P HELX_P5 AA5 ASP A 142 ? SER A 176 ? ASP A 142 SER A 176 1 ? 35 HELX_P HELX_P6 AA6 ASP A 178 ? ASP A 197 ? ASP A 178 ASP A 197 1 ? 20 HELX_P HELX_P7 AA7 ASP A 200 ? GLY A 204 ? ASP A 200 GLY A 204 5 ? 5 HELX_P HELX_P8 AA8 LYS A 207 ? GLN A 218 ? LYS A 207 GLN A 218 1 ? 12 HELX_P HELX_P9 AA9 LEU A 219 ? LYS A 223 ? LEU A 219 LYS A 223 5 ? 5 HELX_P HELX_P10 AB1 ASN A 232 ? LYS A 239 ? ASN A 232 LYS A 239 1 ? 8 HELX_P HELX_P11 AB2 PHE A 243 ? HIS A 254 ? PHE A 243 HIS A 254 1 ? 12 HELX_P HELX_P12 AB3 SER A 263 ? MET A 273 ? SER A 263 MET A 273 1 ? 11 HELX_P HELX_P13 AB4 ALA A 274 ? LYS A 286 ? ALA A 274 LYS A 286 1 ? 13 HELX_P HELX_P14 AB5 ALA A 290 ? GLY A 298 ? ALA A 290 GLY A 298 1 ? 9 HELX_P HELX_P15 AB6 LYS A 325 ? HIS A 334 ? LYS A 325 HIS A 334 1 ? 10 HELX_P HELX_P16 AB7 HIS A 334 ? GLY A 340 ? HIS A 334 GLY A 340 1 ? 7 HELX_P HELX_P17 AB8 LYS A 348 ? GLY A 356 ? LYS A 348 GLY A 356 1 ? 9 HELX_P HELX_P18 AB9 ASN A 357 ? ALA A 364 ? ASN A 357 ALA A 364 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A SER 38 OG ? ? ? 1_555 C MG . MG ? ? A SER 38 A MG 402 1_555 ? ? ? ? ? ? ? 2.113 ? ? metalc2 metalc ? ? B G4P . O3B ? ? ? 1_555 C MG . MG ? ? A G4P 401 A MG 402 1_555 ? ? ? ? ? ? ? 2.166 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 3 ? AA3 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 63 ? ASN A 67 ? GLU A 63 ASN A 67 AA1 2 PHE A 89 ? ASP A 94 ? PHE A 89 ASP A 94 AA1 3 LYS A 26 ? VAL A 30 ? LYS A 26 VAL A 30 AA1 4 GLY A 121 ? ARG A 127 ? GLY A 121 ARG A 127 AA1 5 VAL A 225 ? ASN A 230 ? VAL A 225 ASN A 230 AA1 6 MET A 259 ? PHE A 262 ? MET A 259 PHE A 262 AA2 1 SER A 84 ? ILE A 86 ? SER A 84 ILE A 86 AA2 2 GLU A 314 ? ARG A 321 ? GLU A 314 ARG A 321 AA2 3 LEU A 304 ? ALA A 310 ? LEU A 304 ALA A 310 AA3 1 ARG A 368 ? GLU A 370 ? ARG A 368 GLU A 370 AA3 2 PHE A 341 ? MET A 347 ? PHE A 341 MET A 347 AA3 3 ILE A 381 ? PHE A 386 ? ILE A 381 PHE A 386 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ALA A 64 ? N ALA A 64 O ILE A 92 ? O ILE A 92 AA1 2 3 O GLU A 91 ? O GLU A 91 N ILE A 27 ? N ILE A 27 AA1 3 4 N VAL A 30 ? N VAL A 30 O PHE A 123 ? O PHE A 123 AA1 4 5 N LEU A 126 ? N LEU A 126 O ASN A 230 ? O ASN A 230 AA1 5 6 N ILE A 229 ? N ILE A 229 O PHE A 262 ? O PHE A 262 AA2 1 2 N ILE A 86 ? N ILE A 86 O VAL A 315 ? O VAL A 315 AA2 2 3 O TRP A 318 ? O TRP A 318 N PHE A 307 ? N PHE A 307 AA3 1 2 O GLU A 370 ? O GLU A 370 N ALA A 344 ? N ALA A 344 AA3 2 3 N MET A 347 ? N MET A 347 O ILE A 381 ? O ILE A 381 # _atom_sites.entry_id 7Y9I _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.013801 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008969 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019109 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.pdbx_scat_Z _atom_type.pdbx_N_electrons _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c C 6 6 2.310 20.844 1.020 10.208 1.589 0.569 0.865 51.651 0.216 H 1 1 0.493 10.511 0.323 26.126 0.140 3.142 0.041 57.800 0.003 MG 12 12 5.427 2.828 2.176 79.261 1.228 0.381 2.310 7.194 0.859 N 7 7 12.222 0.006 3.135 9.893 2.014 28.997 1.167 0.583 -11.538 O 8 8 3.049 13.277 2.287 5.701 1.546 0.324 0.867 32.909 0.251 O-1 8 9 4.195 12.857 1.641 4.172 1.528 47.018 -20.325 -0.014 21.960 P 15 15 6.435 1.907 4.179 27.157 1.780 0.526 1.491 68.164 1.115 S 16 16 6.905 1.468 5.203 22.215 1.438 0.254 1.586 56.172 0.867 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 PRO 2 2 ? ? ? A . n A 1 3 PRO 3 3 ? ? ? A . n A 1 4 LYS 4 4 ? ? ? A . n A 1 5 ALA 5 5 ? ? ? A . n A 1 6 LYS 6 6 ? ? ? A . n A 1 7 ALA 7 7 ? ? ? A . n A 1 8 LYS 8 8 ? ? ? A . n A 1 9 ASP 9 9 ? ? ? A . n A 1 10 ALA 10 10 ? ? ? A . n A 1 11 GLY 11 11 ? ? ? A . n A 1 12 PRO 12 12 ? ? ? A . n A 1 13 VAL 13 13 ? ? ? A . n A 1 14 GLU 14 14 ? ? ? A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 ARG 20 20 20 ARG ARG A . n A 1 21 PHE 21 21 21 PHE PHE A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 HIS 24 24 24 HIS HIS A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 ILE 27 27 27 ILE ILE A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 PRO 33 33 33 PRO PRO A . n A 1 34 ASN 34 34 34 ASN ASN A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 PHE 41 41 41 PHE PHE A . n A 1 42 ASN 42 42 42 ASN ASN A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 ILE 49 49 49 ILE ILE A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 ASN 53 53 53 ASN ASN A . n A 1 54 PHE 54 54 54 PHE PHE A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 PHE 56 56 56 PHE PHE A . n A 1 57 CYS 57 57 57 CYS CYS A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 ILE 59 59 59 ILE ILE A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 ASN 62 62 62 ASN ASN A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 ARG 65 65 65 ARG ARG A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 ASN 67 67 67 ASN ASN A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 PRO 69 69 69 PRO PRO A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 PHE 73 73 73 PHE PHE A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 TRP 75 75 75 TRP TRP A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 CYS 77 77 77 CYS CYS A . n A 1 78 GLN 78 78 78 GLN GLN A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 TYR 80 80 80 TYR TYR A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 PRO 82 82 82 PRO PRO A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 GLU 85 85 85 GLU GLU A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 PRO 87 87 87 PRO PRO A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 PHE 89 89 89 PHE PHE A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 ILE 92 92 92 ILE ILE A . n A 1 93 HIS 93 93 93 HIS HIS A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 GLY 97 97 97 GLY GLY A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 VAL 99 99 ? ? ? A . n A 1 100 ARG 100 100 ? ? ? A . n A 1 101 GLY 101 101 ? ? ? A . n A 1 102 ALA 102 102 ? ? ? A . n A 1 103 HIS 103 103 ? ? ? A . n A 1 104 GLU 104 104 ? ? ? A . n A 1 105 GLY 105 105 ? ? ? A . n A 1 106 GLN 106 106 ? ? ? A . n A 1 107 GLY 107 107 ? ? ? A . n A 1 108 LEU 108 108 ? ? ? A . n A 1 109 GLY 109 109 ? ? ? A . n A 1 110 ASN 110 110 ? ? ? A . n A 1 111 ASN 111 111 ? ? ? A . n A 1 112 PHE 112 112 112 PHE PHE A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 SER 114 114 114 SER SER A . n A 1 115 HIS 115 115 115 HIS HIS A . n A 1 116 ILE 116 116 116 ILE ILE A . n A 1 117 ARG 117 117 117 ARG ARG A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 VAL 119 119 119 VAL VAL A . n A 1 120 ASP 120 120 120 ASP ASP A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 ILE 122 122 122 ILE ILE A . n A 1 123 PHE 123 123 123 PHE PHE A . n A 1 124 HIS 124 124 124 HIS HIS A . n A 1 125 VAL 125 125 125 VAL VAL A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 ARG 127 127 127 ARG ARG A . n A 1 128 ALA 128 128 128 ALA ALA A . n A 1 129 PHE 129 129 129 PHE PHE A . n A 1 130 GLU 130 130 130 GLU GLU A . n A 1 131 ASP 131 131 131 ASP ASP A . n A 1 132 ALA 132 132 132 ALA ALA A . n A 1 133 ASP 133 133 133 ASP ASP A . n A 1 134 ILE 134 134 134 ILE ILE A . n A 1 135 ILE 135 135 135 ILE ILE A . n A 1 136 HIS 136 136 136 HIS HIS A . n A 1 137 VAL 137 137 137 VAL VAL A . n A 1 138 ASP 138 138 138 ASP ASP A . n A 1 139 ASP 139 139 139 ASP ASP A . n A 1 140 ILE 140 140 140 ILE ILE A . n A 1 141 VAL 141 141 141 VAL VAL A . n A 1 142 ASP 142 142 142 ASP ASP A . n A 1 143 PRO 143 143 143 PRO PRO A . n A 1 144 VAL 144 144 144 VAL VAL A . n A 1 145 ARG 145 145 145 ARG ARG A . n A 1 146 ASP 146 146 146 ASP ASP A . n A 1 147 LEU 147 147 147 LEU LEU A . n A 1 148 GLU 148 148 148 GLU GLU A . n A 1 149 THR 149 149 149 THR THR A . n A 1 150 ILE 150 150 150 ILE ILE A . n A 1 151 THR 151 151 151 THR THR A . n A 1 152 GLU 152 152 152 GLU GLU A . n A 1 153 GLU 153 153 153 GLU GLU A . n A 1 154 LEU 154 154 154 LEU LEU A . n A 1 155 ARG 155 155 155 ARG ARG A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 LYS 157 157 157 LYS LYS A . n A 1 158 ASP 158 158 158 ASP ASP A . n A 1 159 ILE 159 159 159 ILE ILE A . n A 1 160 GLU 160 160 160 GLU GLU A . n A 1 161 PHE 161 161 161 PHE PHE A . n A 1 162 VAL 162 162 162 VAL VAL A . n A 1 163 GLY 163 163 163 GLY GLY A . n A 1 164 LYS 164 164 164 LYS LYS A . n A 1 165 LYS 165 165 165 LYS LYS A . n A 1 166 ILE 166 166 166 ILE ILE A . n A 1 167 ASP 167 167 167 ASP ASP A . n A 1 168 ASP 168 168 168 ASP ASP A . n A 1 169 VAL 169 169 169 VAL VAL A . n A 1 170 GLU 170 170 170 GLU GLU A . n A 1 171 LYS 171 171 171 LYS LYS A . n A 1 172 SER 172 172 172 SER SER A . n A 1 173 MET 173 173 173 MET MET A . n A 1 174 LYS 174 174 174 LYS LYS A . n A 1 175 ARG 175 175 175 ARG ARG A . n A 1 176 SER 176 176 176 SER SER A . n A 1 177 ASN 177 177 177 ASN ASN A . n A 1 178 ASP 178 178 178 ASP ASP A . n A 1 179 LYS 179 179 179 LYS LYS A . n A 1 180 GLN 180 180 180 GLN GLN A . n A 1 181 LEU 181 181 181 LEU LEU A . n A 1 182 LYS 182 182 182 LYS LYS A . n A 1 183 ILE 183 183 183 ILE ILE A . n A 1 184 GLU 184 184 184 GLU GLU A . n A 1 185 LEU 185 185 185 LEU LEU A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 LEU 187 187 187 LEU LEU A . n A 1 188 LEU 188 188 188 LEU LEU A . n A 1 189 GLN 189 189 189 GLN GLN A . n A 1 190 LYS 190 190 190 LYS LYS A . n A 1 191 VAL 191 191 191 VAL VAL A . n A 1 192 LYS 192 192 192 LYS LYS A . n A 1 193 ALA 193 193 193 ALA ALA A . n A 1 194 TRP 194 194 194 TRP TRP A . n A 1 195 LEU 195 195 195 LEU LEU A . n A 1 196 GLU 196 196 196 GLU GLU A . n A 1 197 ASP 197 197 197 ASP ASP A . n A 1 198 GLY 198 198 198 GLY GLY A . n A 1 199 LYS 199 199 199 LYS LYS A . n A 1 200 ASP 200 200 200 ASP ASP A . n A 1 201 VAL 201 201 201 VAL VAL A . n A 1 202 ARG 202 202 202 ARG ARG A . n A 1 203 PHE 203 203 203 PHE PHE A . n A 1 204 GLY 204 204 204 GLY GLY A . n A 1 205 ASP 205 205 205 ASP ASP A . n A 1 206 TRP 206 206 206 TRP TRP A . n A 1 207 LYS 207 207 207 LYS LYS A . n A 1 208 THR 208 208 208 THR THR A . n A 1 209 ALA 209 209 209 ALA ALA A . n A 1 210 ASP 210 210 210 ASP ASP A . n A 1 211 ILE 211 211 211 ILE ILE A . n A 1 212 GLU 212 212 212 GLU GLU A . n A 1 213 ILE 213 213 213 ILE ILE A . n A 1 214 LEU 214 214 214 LEU LEU A . n A 1 215 ASN 215 215 215 ASN ASN A . n A 1 216 THR 216 216 216 THR THR A . n A 1 217 PHE 217 217 217 PHE PHE A . n A 1 218 GLN 218 218 218 GLN GLN A . n A 1 219 LEU 219 219 219 LEU LEU A . n A 1 220 LEU 220 220 220 LEU LEU A . n A 1 221 SER 221 221 221 SER SER A . n A 1 222 ALA 222 222 222 ALA ALA A . n A 1 223 LYS 223 223 223 LYS LYS A . n A 1 224 PRO 224 224 224 PRO PRO A . n A 1 225 VAL 225 225 225 VAL VAL A . n A 1 226 VAL 226 226 226 VAL VAL A . n A 1 227 TYR 227 227 227 TYR TYR A . n A 1 228 LEU 228 228 228 LEU LEU A . n A 1 229 ILE 229 229 229 ILE ILE A . n A 1 230 ASN 230 230 230 ASN ASN A . n A 1 231 LEU 231 231 231 LEU LEU A . n A 1 232 ASN 232 232 232 ASN ASN A . n A 1 233 GLU 233 233 233 GLU GLU A . n A 1 234 ARG 234 234 234 ARG ARG A . n A 1 235 ASP 235 235 235 ASP ASP A . n A 1 236 TYR 236 236 236 TYR TYR A . n A 1 237 GLN 237 237 237 GLN GLN A . n A 1 238 ARG 238 238 238 ARG ARG A . n A 1 239 LYS 239 239 239 LYS LYS A . n A 1 240 LYS 240 240 240 LYS LYS A . n A 1 241 ASN 241 241 241 ASN ASN A . n A 1 242 LYS 242 242 242 LYS LYS A . n A 1 243 PHE 243 243 243 PHE PHE A . n A 1 244 LEU 244 244 244 LEU LEU A . n A 1 245 PRO 245 245 245 PRO PRO A . n A 1 246 LYS 246 246 246 LYS LYS A . n A 1 247 ILE 247 247 247 ILE ILE A . n A 1 248 HIS 248 248 248 HIS HIS A . n A 1 249 ALA 249 249 249 ALA ALA A . n A 1 250 TRP 250 250 250 TRP TRP A . n A 1 251 VAL 251 251 251 VAL VAL A . n A 1 252 GLN 252 252 252 GLN GLN A . n A 1 253 GLU 253 253 253 GLU GLU A . n A 1 254 HIS 254 254 254 HIS HIS A . n A 1 255 GLY 255 255 255 GLY GLY A . n A 1 256 GLY 256 256 256 GLY GLY A . n A 1 257 ASP 257 257 257 ASP ASP A . n A 1 258 THR 258 258 258 THR THR A . n A 1 259 MET 259 259 259 MET MET A . n A 1 260 ILE 260 260 260 ILE ILE A . n A 1 261 PRO 261 261 261 PRO PRO A . n A 1 262 PHE 262 262 262 PHE PHE A . n A 1 263 SER 263 263 263 SER SER A . n A 1 264 GLY 264 264 264 GLY GLY A . n A 1 265 VAL 265 265 265 VAL VAL A . n A 1 266 PHE 266 266 266 PHE PHE A . n A 1 267 GLU 267 267 267 GLU GLU A . n A 1 268 ARG 268 268 268 ARG ARG A . n A 1 269 SER 269 269 269 SER SER A . n A 1 270 LEU 270 270 270 LEU LEU A . n A 1 271 ALA 271 271 271 ALA ALA A . n A 1 272 ASP 272 272 272 ASP ASP A . n A 1 273 MET 273 273 273 MET MET A . n A 1 274 ALA 274 274 274 ALA ALA A . n A 1 275 PRO 275 275 275 PRO PRO A . n A 1 276 ASP 276 276 276 ASP ASP A . n A 1 277 GLU 277 277 277 GLU GLU A . n A 1 278 ALA 278 278 278 ALA ALA A . n A 1 279 ALA 279 279 279 ALA ALA A . n A 1 280 LYS 280 280 280 LYS LYS A . n A 1 281 TYR 281 281 281 TYR TYR A . n A 1 282 CYS 282 282 282 CYS CYS A . n A 1 283 GLU 283 283 283 GLU GLU A . n A 1 284 GLU 284 284 284 GLU GLU A . n A 1 285 ASN 285 285 285 ASN ASN A . n A 1 286 LYS 286 286 286 LYS LYS A . n A 1 287 LEU 287 287 287 LEU LEU A . n A 1 288 GLN 288 288 288 GLN GLN A . n A 1 289 SER 289 289 289 SER SER A . n A 1 290 ALA 290 290 290 ALA ALA A . n A 1 291 LEU 291 291 291 LEU LEU A . n A 1 292 PRO 292 292 292 PRO PRO A . n A 1 293 ARG 293 293 293 ARG ARG A . n A 1 294 ILE 294 294 294 ILE ILE A . n A 1 295 ILE 295 295 295 ILE ILE A . n A 1 296 LYS 296 296 296 LYS LYS A . n A 1 297 THR 297 297 297 THR THR A . n A 1 298 GLY 298 298 298 GLY GLY A . n A 1 299 PHE 299 299 299 PHE PHE A . n A 1 300 SER 300 300 300 SER SER A . n A 1 301 ALA 301 301 301 ALA ALA A . n A 1 302 ILE 302 302 302 ILE ILE A . n A 1 303 ASN 303 303 303 ASN ASN A . n A 1 304 LEU 304 304 304 LEU LEU A . n A 1 305 ILE 305 305 305 ILE ILE A . n A 1 306 TYR 306 306 306 TYR TYR A . n A 1 307 PHE 307 307 307 PHE PHE A . n A 1 308 PHE 308 308 308 PHE PHE A . n A 1 309 THR 309 309 309 THR THR A . n A 1 310 ALA 310 310 310 ALA ALA A . n A 1 311 GLY 311 311 311 GLY GLY A . n A 1 312 PRO 312 312 312 PRO PRO A . n A 1 313 ASP 313 313 313 ASP ASP A . n A 1 314 GLU 314 314 314 GLU GLU A . n A 1 315 VAL 315 315 315 VAL VAL A . n A 1 316 LYS 316 316 316 LYS LYS A . n A 1 317 CYS 317 317 317 CYS CYS A . n A 1 318 TRP 318 318 318 TRP TRP A . n A 1 319 GLN 319 319 319 GLN GLN A . n A 1 320 ILE 320 320 320 ILE ILE A . n A 1 321 ARG 321 321 321 ARG ARG A . n A 1 322 ARG 322 322 322 ARG ARG A . n A 1 323 GLN 323 323 323 GLN GLN A . n A 1 324 SER 324 324 324 SER SER A . n A 1 325 LYS 325 325 325 LYS LYS A . n A 1 326 ALA 326 326 326 ALA ALA A . n A 1 327 PRO 327 327 327 PRO PRO A . n A 1 328 GLN 328 328 328 GLN GLN A . n A 1 329 ALA 329 329 329 ALA ALA A . n A 1 330 ALA 330 330 330 ALA ALA A . n A 1 331 GLY 331 331 331 GLY GLY A . n A 1 332 ALA 332 332 332 ALA ALA A . n A 1 333 ILE 333 333 333 ILE ILE A . n A 1 334 HIS 334 334 334 HIS HIS A . n A 1 335 THR 335 335 335 THR THR A . n A 1 336 ASP 336 336 336 ASP ASP A . n A 1 337 PHE 337 337 337 PHE PHE A . n A 1 338 GLU 338 338 338 GLU GLU A . n A 1 339 ARG 339 339 339 ARG ARG A . n A 1 340 GLY 340 340 340 GLY GLY A . n A 1 341 PHE 341 341 341 PHE PHE A . n A 1 342 ILE 342 342 342 ILE ILE A . n A 1 343 CYS 343 343 343 CYS CYS A . n A 1 344 ALA 344 344 344 ALA ALA A . n A 1 345 GLU 345 345 345 GLU GLU A . n A 1 346 VAL 346 346 346 VAL VAL A . n A 1 347 MET 347 347 347 MET MET A . n A 1 348 LYS 348 348 348 LYS LYS A . n A 1 349 PHE 349 349 349 PHE PHE A . n A 1 350 GLU 350 350 350 GLU GLU A . n A 1 351 ASP 351 351 351 ASP ASP A . n A 1 352 LEU 352 352 352 LEU LEU A . n A 1 353 LYS 353 353 353 LYS LYS A . n A 1 354 GLU 354 354 354 GLU GLU A . n A 1 355 LEU 355 355 355 LEU LEU A . n A 1 356 GLY 356 356 356 GLY GLY A . n A 1 357 ASN 357 357 357 ASN ASN A . n A 1 358 GLU 358 358 358 GLU GLU A . n A 1 359 PRO 359 359 359 PRO PRO A . n A 1 360 ALA 360 360 360 ALA ALA A . n A 1 361 VAL 361 361 361 VAL VAL A . n A 1 362 LYS 362 362 362 LYS LYS A . n A 1 363 ALA 363 363 363 ALA ALA A . n A 1 364 ALA 364 364 364 ALA ALA A . n A 1 365 GLY 365 365 365 GLY GLY A . n A 1 366 LYS 366 366 366 LYS LYS A . n A 1 367 TYR 367 367 367 TYR TYR A . n A 1 368 ARG 368 368 368 ARG ARG A . n A 1 369 GLN 369 369 369 GLN GLN A . n A 1 370 GLU 370 370 370 GLU GLU A . n A 1 371 GLY 371 371 371 GLY GLY A . n A 1 372 LYS 372 372 372 LYS LYS A . n A 1 373 THR 373 373 373 THR THR A . n A 1 374 TYR 374 374 374 TYR TYR A . n A 1 375 VAL 375 375 375 VAL VAL A . n A 1 376 VAL 376 376 376 VAL VAL A . n A 1 377 GLN 377 377 377 GLN GLN A . n A 1 378 ASP 378 378 378 ASP ASP A . n A 1 379 GLY 379 379 379 GLY GLY A . n A 1 380 ASP 380 380 380 ASP ASP A . n A 1 381 ILE 381 381 381 ILE ILE A . n A 1 382 ILE 382 382 382 ILE ILE A . n A 1 383 PHE 383 383 383 PHE PHE A . n A 1 384 PHE 384 384 384 PHE PHE A . n A 1 385 LYS 385 385 385 LYS LYS A . n A 1 386 PHE 386 386 386 PHE PHE A . n A 1 387 ASN 387 387 387 ASN ASN A . n A 1 388 VAL 388 388 388 VAL VAL A . n A 1 389 SER 389 389 389 SER SER A . n A 1 390 GLY 390 390 ? ? ? A . n A 1 391 GLY 391 391 ? ? ? A . n A 1 392 GLY 392 392 ? ? ? A . n A 1 393 LYS 393 393 ? ? ? A . n A 1 394 LYS 394 394 ? ? ? A . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email chenzhongzhou@cau.edu.cn _pdbx_contact_author.name_first zhongzhou _pdbx_contact_author.name_last Chen _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-1319-9664 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 G4P 1 401 202 G4P G4P A . C 3 MG 1 402 203 MG MG A . D 4 HOH 1 501 40 HOH HOH A . D 4 HOH 2 502 6 HOH HOH A . D 4 HOH 3 503 56 HOH HOH A . D 4 HOH 4 504 23 HOH HOH A . D 4 HOH 5 505 58 HOH HOH A . D 4 HOH 6 506 33 HOH HOH A . D 4 HOH 7 507 35 HOH HOH A . D 4 HOH 8 508 43 HOH HOH A . D 4 HOH 9 509 44 HOH HOH A . D 4 HOH 10 510 14 HOH HOH A . D 4 HOH 11 511 54 HOH HOH A . D 4 HOH 12 512 37 HOH HOH A . D 4 HOH 13 513 29 HOH HOH A . D 4 HOH 14 514 52 HOH HOH A . D 4 HOH 15 515 18 HOH HOH A . D 4 HOH 16 516 60 HOH HOH A . D 4 HOH 17 517 31 HOH HOH A . D 4 HOH 18 518 21 HOH HOH A . D 4 HOH 19 519 36 HOH HOH A . D 4 HOH 20 520 46 HOH HOH A . D 4 HOH 21 521 5 HOH HOH A . D 4 HOH 22 522 24 HOH HOH A . D 4 HOH 23 523 11 HOH HOH A . D 4 HOH 24 524 34 HOH HOH A . D 4 HOH 25 525 47 HOH HOH A . D 4 HOH 26 526 2 HOH HOH A . D 4 HOH 27 527 9 HOH HOH A . D 4 HOH 28 528 28 HOH HOH A . D 4 HOH 29 529 1 HOH HOH A . D 4 HOH 30 530 19 HOH HOH A . D 4 HOH 31 531 7 HOH HOH A . D 4 HOH 32 532 10 HOH HOH A . D 4 HOH 33 533 49 HOH HOH A . D 4 HOH 34 534 15 HOH HOH A . D 4 HOH 35 535 50 HOH HOH A . D 4 HOH 36 536 48 HOH HOH A . D 4 HOH 37 537 53 HOH HOH A . D 4 HOH 38 538 39 HOH HOH A . D 4 HOH 39 539 16 HOH HOH A . D 4 HOH 40 540 57 HOH HOH A . D 4 HOH 41 541 4 HOH HOH A . D 4 HOH 42 542 45 HOH HOH A . D 4 HOH 43 543 55 HOH HOH A . D 4 HOH 44 544 25 HOH HOH A . D 4 HOH 45 545 12 HOH HOH A . D 4 HOH 46 546 38 HOH HOH A . D 4 HOH 47 547 22 HOH HOH A . D 4 HOH 48 548 20 HOH HOH A . D 4 HOH 49 549 51 HOH HOH A . D 4 HOH 50 550 3 HOH HOH A . D 4 HOH 51 551 59 HOH HOH A . D 4 HOH 52 552 26 HOH HOH A . D 4 HOH 53 553 8 HOH HOH A . D 4 HOH 54 554 27 HOH HOH A . D 4 HOH 55 555 61 HOH HOH A . D 4 HOH 56 556 17 HOH HOH A . D 4 HOH 57 557 42 HOH HOH A . D 4 HOH 58 558 30 HOH HOH A . D 4 HOH 59 559 32 HOH HOH A . D 4 HOH 60 560 13 HOH HOH A . D 4 HOH 61 561 41 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 790 ? 1 MORE -16 ? 1 'SSA (A^2)' 18800 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id OG _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id A _pdbx_struct_conn_angle.ptnr1_label_comp_id SER _pdbx_struct_conn_angle.ptnr1_label_seq_id 38 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id SER _pdbx_struct_conn_angle.ptnr1_auth_seq_id 38 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id MG _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id C _pdbx_struct_conn_angle.ptnr2_label_comp_id MG _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id A _pdbx_struct_conn_angle.ptnr2_auth_comp_id MG _pdbx_struct_conn_angle.ptnr2_auth_seq_id 402 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id O3B _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id B _pdbx_struct_conn_angle.ptnr3_label_comp_id G4P _pdbx_struct_conn_angle.ptnr3_label_seq_id . _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id A _pdbx_struct_conn_angle.ptnr3_auth_comp_id G4P _pdbx_struct_conn_angle.ptnr3_auth_seq_id 401 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 91.5 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-07-12 2 'Structure model' 1 1 2023-11-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' pdbx_initial_refinement_model # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0267 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_entry_details.entry_id 7Y9I _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 22 ? ? -112.87 -80.93 2 1 PHE A 54 ? ? -118.00 68.63 3 1 ASN A 62 ? ? -97.20 32.06 4 1 ALA A 132 ? ? -116.25 -88.88 5 1 ASP A 142 ? ? -153.68 87.30 6 1 LYS A 239 ? ? 70.40 44.95 7 1 ILE A 302 ? ? -114.50 79.63 8 1 HIS A 334 ? ? -172.70 143.94 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 46 ? CE ? A LYS 46 CE 2 1 Y 1 A LYS 46 ? NZ ? A LYS 46 NZ 3 1 Y 1 A GLU 52 ? CG ? A GLU 52 CG 4 1 Y 1 A GLU 52 ? CD ? A GLU 52 CD 5 1 Y 1 A GLU 52 ? OE1 ? A GLU 52 OE1 6 1 Y 1 A GLU 52 ? OE2 ? A GLU 52 OE2 7 1 Y 1 A GLU 60 ? CG ? A GLU 60 CG 8 1 Y 1 A GLU 60 ? CD ? A GLU 60 CD 9 1 Y 1 A GLU 60 ? OE1 ? A GLU 60 OE1 10 1 Y 1 A GLU 60 ? OE2 ? A GLU 60 OE2 11 1 Y 1 A GLU 71 ? CG ? A GLU 71 CG 12 1 Y 1 A GLU 71 ? CD ? A GLU 71 CD 13 1 Y 1 A GLU 71 ? OE1 ? A GLU 71 OE1 14 1 Y 1 A GLU 71 ? OE2 ? A GLU 71 OE2 15 1 Y 1 A GLN 78 ? CD ? A GLN 78 CD 16 1 Y 1 A GLN 78 ? OE1 ? A GLN 78 OE1 17 1 Y 1 A GLN 78 ? NE2 ? A GLN 78 NE2 18 1 Y 1 A LYS 81 ? CD ? A LYS 81 CD 19 1 Y 1 A LYS 81 ? CE ? A LYS 81 CE 20 1 Y 1 A LYS 81 ? NZ ? A LYS 81 NZ 21 1 Y 1 A LYS 83 ? CD ? A LYS 83 CD 22 1 Y 1 A LYS 83 ? CE ? A LYS 83 CE 23 1 Y 1 A LYS 83 ? NZ ? A LYS 83 NZ 24 1 Y 1 A LEU 98 ? CG ? A LEU 98 CG 25 1 Y 1 A LEU 98 ? CD1 ? A LEU 98 CD1 26 1 Y 1 A LEU 98 ? CD2 ? A LEU 98 CD2 27 1 Y 1 A PHE 112 ? CG ? A PHE 112 CG 28 1 Y 1 A PHE 112 ? CD1 ? A PHE 112 CD1 29 1 Y 1 A PHE 112 ? CD2 ? A PHE 112 CD2 30 1 Y 1 A PHE 112 ? CE1 ? A PHE 112 CE1 31 1 Y 1 A PHE 112 ? CE2 ? A PHE 112 CE2 32 1 Y 1 A PHE 112 ? CZ ? A PHE 112 CZ 33 1 Y 1 A HIS 115 ? CG ? A HIS 115 CG 34 1 Y 1 A HIS 115 ? ND1 ? A HIS 115 ND1 35 1 Y 1 A HIS 115 ? CD2 ? A HIS 115 CD2 36 1 Y 1 A HIS 115 ? CE1 ? A HIS 115 CE1 37 1 Y 1 A HIS 115 ? NE2 ? A HIS 115 NE2 38 1 Y 1 A GLU 130 ? CD ? A GLU 130 CD 39 1 Y 1 A GLU 130 ? OE1 ? A GLU 130 OE1 40 1 Y 1 A GLU 130 ? OE2 ? A GLU 130 OE2 41 1 Y 1 A ASP 133 ? CG ? A ASP 133 CG 42 1 Y 1 A ASP 133 ? OD1 ? A ASP 133 OD1 43 1 Y 1 A ASP 133 ? OD2 ? A ASP 133 OD2 44 1 Y 1 A GLU 148 ? OE1 ? A GLU 148 OE1 45 1 Y 1 A GLU 148 ? OE2 ? A GLU 148 OE2 46 1 Y 1 A LYS 157 ? CE ? A LYS 157 CE 47 1 Y 1 A LYS 157 ? NZ ? A LYS 157 NZ 48 1 Y 1 A GLU 160 ? CG ? A GLU 160 CG 49 1 Y 1 A GLU 160 ? CD ? A GLU 160 CD 50 1 Y 1 A GLU 160 ? OE1 ? A GLU 160 OE1 51 1 Y 1 A GLU 160 ? OE2 ? A GLU 160 OE2 52 1 Y 1 A LYS 164 ? CD ? A LYS 164 CD 53 1 Y 1 A LYS 164 ? CE ? A LYS 164 CE 54 1 Y 1 A LYS 164 ? NZ ? A LYS 164 NZ 55 1 Y 1 A LYS 165 ? CE ? A LYS 165 CE 56 1 Y 1 A LYS 165 ? NZ ? A LYS 165 NZ 57 1 Y 1 A LYS 174 ? CG ? A LYS 174 CG 58 1 Y 1 A LYS 174 ? CD ? A LYS 174 CD 59 1 Y 1 A LYS 174 ? CE ? A LYS 174 CE 60 1 Y 1 A LYS 174 ? NZ ? A LYS 174 NZ 61 1 Y 1 A ASN 177 ? CG ? A ASN 177 CG 62 1 Y 1 A ASN 177 ? OD1 ? A ASN 177 OD1 63 1 Y 1 A ASN 177 ? ND2 ? A ASN 177 ND2 64 1 Y 1 A LYS 179 ? CG ? A LYS 179 CG 65 1 Y 1 A LYS 179 ? CD ? A LYS 179 CD 66 1 Y 1 A LYS 179 ? CE ? A LYS 179 CE 67 1 Y 1 A LYS 179 ? NZ ? A LYS 179 NZ 68 1 Y 1 A GLN 180 ? CD ? A GLN 180 CD 69 1 Y 1 A GLN 180 ? OE1 ? A GLN 180 OE1 70 1 Y 1 A GLN 180 ? NE2 ? A GLN 180 NE2 71 1 Y 1 A LYS 182 ? CG ? A LYS 182 CG 72 1 Y 1 A LYS 182 ? CD ? A LYS 182 CD 73 1 Y 1 A LYS 182 ? CE ? A LYS 182 CE 74 1 Y 1 A LYS 182 ? NZ ? A LYS 182 NZ 75 1 Y 1 A GLU 184 ? CD ? A GLU 184 CD 76 1 Y 1 A GLU 184 ? OE1 ? A GLU 184 OE1 77 1 Y 1 A GLU 184 ? OE2 ? A GLU 184 OE2 78 1 Y 1 A GLU 186 ? CG ? A GLU 186 CG 79 1 Y 1 A GLU 186 ? CD ? A GLU 186 CD 80 1 Y 1 A GLU 186 ? OE1 ? A GLU 186 OE1 81 1 Y 1 A GLU 186 ? OE2 ? A GLU 186 OE2 82 1 Y 1 A LYS 190 ? CE ? A LYS 190 CE 83 1 Y 1 A LYS 190 ? NZ ? A LYS 190 NZ 84 1 Y 1 A GLU 212 ? CG ? A GLU 212 CG 85 1 Y 1 A GLU 212 ? CD ? A GLU 212 CD 86 1 Y 1 A GLU 212 ? OE1 ? A GLU 212 OE1 87 1 Y 1 A GLU 212 ? OE2 ? A GLU 212 OE2 88 1 Y 1 A ILE 229 ? CD1 ? A ILE 229 CD1 89 1 Y 1 A GLU 253 ? CG ? A GLU 253 CG 90 1 Y 1 A GLU 253 ? CD ? A GLU 253 CD 91 1 Y 1 A GLU 253 ? OE1 ? A GLU 253 OE1 92 1 Y 1 A GLU 253 ? OE2 ? A GLU 253 OE2 93 1 Y 1 A ASP 276 ? CG ? A ASP 276 CG 94 1 Y 1 A ASP 276 ? OD1 ? A ASP 276 OD1 95 1 Y 1 A ASP 276 ? OD2 ? A ASP 276 OD2 96 1 Y 1 A GLU 277 ? CG ? A GLU 277 CG 97 1 Y 1 A GLU 277 ? CD ? A GLU 277 CD 98 1 Y 1 A GLU 277 ? OE1 ? A GLU 277 OE1 99 1 Y 1 A GLU 277 ? OE2 ? A GLU 277 OE2 100 1 Y 1 A LYS 280 ? CG ? A LYS 280 CG 101 1 Y 1 A LYS 280 ? CD ? A LYS 280 CD 102 1 Y 1 A LYS 280 ? CE ? A LYS 280 CE 103 1 Y 1 A LYS 280 ? NZ ? A LYS 280 NZ 104 1 Y 1 A GLU 283 ? CG ? A GLU 283 CG 105 1 Y 1 A GLU 283 ? CD ? A GLU 283 CD 106 1 Y 1 A GLU 283 ? OE1 ? A GLU 283 OE1 107 1 Y 1 A GLU 283 ? OE2 ? A GLU 283 OE2 108 1 Y 1 A GLU 284 ? CG ? A GLU 284 CG 109 1 Y 1 A GLU 284 ? CD ? A GLU 284 CD 110 1 Y 1 A GLU 284 ? OE1 ? A GLU 284 OE1 111 1 Y 1 A GLU 284 ? OE2 ? A GLU 284 OE2 112 1 Y 1 A LYS 286 ? CE ? A LYS 286 CE 113 1 Y 1 A LYS 286 ? NZ ? A LYS 286 NZ 114 1 Y 1 A ASP 313 ? OD1 ? A ASP 313 OD1 115 1 Y 1 A ASP 313 ? OD2 ? A ASP 313 OD2 116 1 Y 1 A LYS 325 ? CE ? A LYS 325 CE 117 1 Y 1 A LYS 325 ? NZ ? A LYS 325 NZ 118 1 Y 1 A ARG 339 ? CG ? A ARG 339 CG 119 1 Y 1 A ARG 339 ? CD ? A ARG 339 CD 120 1 Y 1 A ARG 339 ? NE ? A ARG 339 NE 121 1 Y 1 A ARG 339 ? CZ ? A ARG 339 CZ 122 1 Y 1 A ARG 339 ? NH1 ? A ARG 339 NH1 123 1 Y 1 A ARG 339 ? NH2 ? A ARG 339 NH2 124 1 Y 1 A GLU 350 ? CG ? A GLU 350 CG 125 1 Y 1 A GLU 350 ? CD ? A GLU 350 CD 126 1 Y 1 A GLU 350 ? OE1 ? A GLU 350 OE1 127 1 Y 1 A GLU 350 ? OE2 ? A GLU 350 OE2 128 1 Y 1 A LYS 353 ? CE ? A LYS 353 CE 129 1 Y 1 A LYS 353 ? NZ ? A LYS 353 NZ 130 1 Y 1 A LYS 372 ? CD ? A LYS 372 CD 131 1 Y 1 A LYS 372 ? CE ? A LYS 372 CE 132 1 Y 1 A LYS 372 ? NZ ? A LYS 372 NZ 133 1 Y 1 A LYS 385 ? NZ ? A LYS 385 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A PRO 2 ? A PRO 2 3 1 Y 1 A PRO 3 ? A PRO 3 4 1 Y 1 A LYS 4 ? A LYS 4 5 1 Y 1 A ALA 5 ? A ALA 5 6 1 Y 1 A LYS 6 ? A LYS 6 7 1 Y 1 A ALA 7 ? A ALA 7 8 1 Y 1 A LYS 8 ? A LYS 8 9 1 Y 1 A ASP 9 ? A ASP 9 10 1 Y 1 A ALA 10 ? A ALA 10 11 1 Y 1 A GLY 11 ? A GLY 11 12 1 Y 1 A PRO 12 ? A PRO 12 13 1 Y 1 A VAL 13 ? A VAL 13 14 1 Y 1 A GLU 14 ? A GLU 14 15 1 Y 1 A VAL 99 ? A VAL 99 16 1 Y 1 A ARG 100 ? A ARG 100 17 1 Y 1 A GLY 101 ? A GLY 101 18 1 Y 1 A ALA 102 ? A ALA 102 19 1 Y 1 A HIS 103 ? A HIS 103 20 1 Y 1 A GLU 104 ? A GLU 104 21 1 Y 1 A GLY 105 ? A GLY 105 22 1 Y 1 A GLN 106 ? A GLN 106 23 1 Y 1 A GLY 107 ? A GLY 107 24 1 Y 1 A LEU 108 ? A LEU 108 25 1 Y 1 A GLY 109 ? A GLY 109 26 1 Y 1 A ASN 110 ? A ASN 110 27 1 Y 1 A ASN 111 ? A ASN 111 28 1 Y 1 A GLY 390 ? A GLY 390 29 1 Y 1 A GLY 391 ? A GLY 391 30 1 Y 1 A GLY 392 ? A GLY 392 31 1 Y 1 A LYS 393 ? A LYS 393 32 1 Y 1 A LYS 394 ? A LYS 394 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 G4P PB P N N 88 G4P O1B O N N 89 G4P O2B O N N 90 G4P O3B O N N 91 G4P O3A O N N 92 G4P PA P N S 93 G4P O1A O N N 94 G4P O2A O N N 95 G4P "O5'" O N N 96 G4P "C5'" C N N 97 G4P "C4'" C N R 98 G4P "O4'" O N N 99 G4P "C3'" C N S 100 G4P "O3'" O N N 101 G4P "C2'" C N R 102 G4P "O2'" O N N 103 G4P "C1'" C N R 104 G4P N9 N Y N 105 G4P C8 C Y N 106 G4P N7 N Y N 107 G4P C5 C Y N 108 G4P C6 C N N 109 G4P O6 O N N 110 G4P N1 N N N 111 G4P C2 C N N 112 G4P N2 N N N 113 G4P N3 N N N 114 G4P C4 C Y N 115 G4P PC P N S 116 G4P O1C O N N 117 G4P O2C O N N 118 G4P O3C O N N 119 G4P PD P N N 120 G4P O1D O N N 121 G4P O2D O N N 122 G4P O3D O N N 123 G4P HOB2 H N N 124 G4P HOB3 H N N 125 G4P HOA2 H N N 126 G4P "H5'" H N N 127 G4P "H5''" H N N 128 G4P "H4'" H N N 129 G4P "H3'" H N N 130 G4P "H2'" H N N 131 G4P "HO2'" H N N 132 G4P "H1'" H N N 133 G4P H8 H N N 134 G4P HN1 H N N 135 G4P HN21 H N N 136 G4P HN22 H N N 137 G4P H2C H N N 138 G4P H2D H N N 139 G4P H3D H N N 140 GLN N N N N 141 GLN CA C N S 142 GLN C C N N 143 GLN O O N N 144 GLN CB C N N 145 GLN CG C N N 146 GLN CD C N N 147 GLN OE1 O N N 148 GLN NE2 N N N 149 GLN OXT O N N 150 GLN H H N N 151 GLN H2 H N N 152 GLN HA H N N 153 GLN HB2 H N N 154 GLN HB3 H N N 155 GLN HG2 H N N 156 GLN HG3 H N N 157 GLN HE21 H N N 158 GLN HE22 H N N 159 GLN HXT H N N 160 GLU N N N N 161 GLU CA C N S 162 GLU C C N N 163 GLU O O N N 164 GLU CB C N N 165 GLU CG C N N 166 GLU CD C N N 167 GLU OE1 O N N 168 GLU OE2 O N N 169 GLU OXT O N N 170 GLU H H N N 171 GLU H2 H N N 172 GLU HA H N N 173 GLU HB2 H N N 174 GLU HB3 H N N 175 GLU HG2 H N N 176 GLU HG3 H N N 177 GLU HE2 H N N 178 GLU HXT H N N 179 GLY N N N N 180 GLY CA C N N 181 GLY C C N N 182 GLY O O N N 183 GLY OXT O N N 184 GLY H H N N 185 GLY H2 H N N 186 GLY HA2 H N N 187 GLY HA3 H N N 188 GLY HXT H N N 189 HIS N N N N 190 HIS CA C N S 191 HIS C C N N 192 HIS O O N N 193 HIS CB C N N 194 HIS CG C Y N 195 HIS ND1 N Y N 196 HIS CD2 C Y N 197 HIS CE1 C Y N 198 HIS NE2 N Y N 199 HIS OXT O N N 200 HIS H H N N 201 HIS H2 H N N 202 HIS HA H N N 203 HIS HB2 H N N 204 HIS HB3 H N N 205 HIS HD1 H N N 206 HIS HD2 H N N 207 HIS HE1 H N N 208 HIS HE2 H N N 209 HIS HXT H N N 210 HOH O O N N 211 HOH H1 H N N 212 HOH H2 H N N 213 ILE N N N N 214 ILE CA C N S 215 ILE C C N N 216 ILE O O N N 217 ILE CB C N S 218 ILE CG1 C N N 219 ILE CG2 C N N 220 ILE CD1 C N N 221 ILE OXT O N N 222 ILE H H N N 223 ILE H2 H N N 224 ILE HA H N N 225 ILE HB H N N 226 ILE HG12 H N N 227 ILE HG13 H N N 228 ILE HG21 H N N 229 ILE HG22 H N N 230 ILE HG23 H N N 231 ILE HD11 H N N 232 ILE HD12 H N N 233 ILE HD13 H N N 234 ILE HXT H N N 235 LEU N N N N 236 LEU CA C N S 237 LEU C C N N 238 LEU O O N N 239 LEU CB C N N 240 LEU CG C N N 241 LEU CD1 C N N 242 LEU CD2 C N N 243 LEU OXT O N N 244 LEU H H N N 245 LEU H2 H N N 246 LEU HA H N N 247 LEU HB2 H N N 248 LEU HB3 H N N 249 LEU HG H N N 250 LEU HD11 H N N 251 LEU HD12 H N N 252 LEU HD13 H N N 253 LEU HD21 H N N 254 LEU HD22 H N N 255 LEU HD23 H N N 256 LEU HXT H N N 257 LYS N N N N 258 LYS CA C N S 259 LYS C C N N 260 LYS O O N N 261 LYS CB C N N 262 LYS CG C N N 263 LYS CD C N N 264 LYS CE C N N 265 LYS NZ N N N 266 LYS OXT O N N 267 LYS H H N N 268 LYS H2 H N N 269 LYS HA H N N 270 LYS HB2 H N N 271 LYS HB3 H N N 272 LYS HG2 H N N 273 LYS HG3 H N N 274 LYS HD2 H N N 275 LYS HD3 H N N 276 LYS HE2 H N N 277 LYS HE3 H N N 278 LYS HZ1 H N N 279 LYS HZ2 H N N 280 LYS HZ3 H N N 281 LYS HXT H N N 282 MET N N N N 283 MET CA C N S 284 MET C C N N 285 MET O O N N 286 MET CB C N N 287 MET CG C N N 288 MET SD S N N 289 MET CE C N N 290 MET OXT O N N 291 MET H H N N 292 MET H2 H N N 293 MET HA H N N 294 MET HB2 H N N 295 MET HB3 H N N 296 MET HG2 H N N 297 MET HG3 H N N 298 MET HE1 H N N 299 MET HE2 H N N 300 MET HE3 H N N 301 MET HXT H N N 302 MG MG MG N N 303 PHE N N N N 304 PHE CA C N S 305 PHE C C N N 306 PHE O O N N 307 PHE CB C N N 308 PHE CG C Y N 309 PHE CD1 C Y N 310 PHE CD2 C Y N 311 PHE CE1 C Y N 312 PHE CE2 C Y N 313 PHE CZ C Y N 314 PHE OXT O N N 315 PHE H H N N 316 PHE H2 H N N 317 PHE HA H N N 318 PHE HB2 H N N 319 PHE HB3 H N N 320 PHE HD1 H N N 321 PHE HD2 H N N 322 PHE HE1 H N N 323 PHE HE2 H N N 324 PHE HZ H N N 325 PHE HXT H N N 326 PRO N N N N 327 PRO CA C N S 328 PRO C C N N 329 PRO O O N N 330 PRO CB C N N 331 PRO CG C N N 332 PRO CD C N N 333 PRO OXT O N N 334 PRO H H N N 335 PRO HA H N N 336 PRO HB2 H N N 337 PRO HB3 H N N 338 PRO HG2 H N N 339 PRO HG3 H N N 340 PRO HD2 H N N 341 PRO HD3 H N N 342 PRO HXT H N N 343 SER N N N N 344 SER CA C N S 345 SER C C N N 346 SER O O N N 347 SER CB C N N 348 SER OG O N N 349 SER OXT O N N 350 SER H H N N 351 SER H2 H N N 352 SER HA H N N 353 SER HB2 H N N 354 SER HB3 H N N 355 SER HG H N N 356 SER HXT H N N 357 THR N N N N 358 THR CA C N S 359 THR C C N N 360 THR O O N N 361 THR CB C N R 362 THR OG1 O N N 363 THR CG2 C N N 364 THR OXT O N N 365 THR H H N N 366 THR H2 H N N 367 THR HA H N N 368 THR HB H N N 369 THR HG1 H N N 370 THR HG21 H N N 371 THR HG22 H N N 372 THR HG23 H N N 373 THR HXT H N N 374 TRP N N N N 375 TRP CA C N S 376 TRP C C N N 377 TRP O O N N 378 TRP CB C N N 379 TRP CG C Y N 380 TRP CD1 C Y N 381 TRP CD2 C Y N 382 TRP NE1 N Y N 383 TRP CE2 C Y N 384 TRP CE3 C Y N 385 TRP CZ2 C Y N 386 TRP CZ3 C Y N 387 TRP CH2 C Y N 388 TRP OXT O N N 389 TRP H H N N 390 TRP H2 H N N 391 TRP HA H N N 392 TRP HB2 H N N 393 TRP HB3 H N N 394 TRP HD1 H N N 395 TRP HE1 H N N 396 TRP HE3 H N N 397 TRP HZ2 H N N 398 TRP HZ3 H N N 399 TRP HH2 H N N 400 TRP HXT H N N 401 TYR N N N N 402 TYR CA C N S 403 TYR C C N N 404 TYR O O N N 405 TYR CB C N N 406 TYR CG C Y N 407 TYR CD1 C Y N 408 TYR CD2 C Y N 409 TYR CE1 C Y N 410 TYR CE2 C Y N 411 TYR CZ C Y N 412 TYR OH O N N 413 TYR OXT O N N 414 TYR H H N N 415 TYR H2 H N N 416 TYR HA H N N 417 TYR HB2 H N N 418 TYR HB3 H N N 419 TYR HD1 H N N 420 TYR HD2 H N N 421 TYR HE1 H N N 422 TYR HE2 H N N 423 TYR HH H N N 424 TYR HXT H N N 425 VAL N N N N 426 VAL CA C N S 427 VAL C C N N 428 VAL O O N N 429 VAL CB C N N 430 VAL CG1 C N N 431 VAL CG2 C N N 432 VAL OXT O N N 433 VAL H H N N 434 VAL H2 H N N 435 VAL HA H N N 436 VAL HB H N N 437 VAL HG11 H N N 438 VAL HG12 H N N 439 VAL HG13 H N N 440 VAL HG21 H N N 441 VAL HG22 H N N 442 VAL HG23 H N N 443 VAL HXT H N N 444 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 G4P PB O1B doub N N 83 G4P PB O2B sing N N 84 G4P PB O3B sing N N 85 G4P PB O3A sing N N 86 G4P O2B HOB2 sing N N 87 G4P O3B HOB3 sing N N 88 G4P O3A PA sing N N 89 G4P PA O1A doub N N 90 G4P PA O2A sing N N 91 G4P PA "O5'" sing N N 92 G4P O2A HOA2 sing N N 93 G4P "O5'" "C5'" sing N N 94 G4P "C5'" "C4'" sing N N 95 G4P "C5'" "H5'" sing N N 96 G4P "C5'" "H5''" sing N N 97 G4P "C4'" "O4'" sing N N 98 G4P "C4'" "C3'" sing N N 99 G4P "C4'" "H4'" sing N N 100 G4P "O4'" "C1'" sing N N 101 G4P "C3'" "O3'" sing N N 102 G4P "C3'" "C2'" sing N N 103 G4P "C3'" "H3'" sing N N 104 G4P "O3'" PC sing N N 105 G4P "C2'" "O2'" sing N N 106 G4P "C2'" "C1'" sing N N 107 G4P "C2'" "H2'" sing N N 108 G4P "O2'" "HO2'" sing N N 109 G4P "C1'" N9 sing N N 110 G4P "C1'" "H1'" sing N N 111 G4P N9 C8 sing Y N 112 G4P N9 C4 sing Y N 113 G4P C8 N7 doub Y N 114 G4P C8 H8 sing N N 115 G4P N7 C5 sing Y N 116 G4P C5 C6 sing N N 117 G4P C5 C4 doub Y N 118 G4P C6 O6 doub N N 119 G4P C6 N1 sing N N 120 G4P N1 C2 sing N N 121 G4P N1 HN1 sing N N 122 G4P C2 N2 sing N N 123 G4P C2 N3 doub N N 124 G4P N2 HN21 sing N N 125 G4P N2 HN22 sing N N 126 G4P N3 C4 sing N N 127 G4P PC O1C doub N N 128 G4P PC O2C sing N N 129 G4P PC O3C sing N N 130 G4P O2C H2C sing N N 131 G4P O3C PD sing N N 132 G4P PD O1D doub N N 133 G4P PD O2D sing N N 134 G4P PD O3D sing N N 135 G4P O2D H2D sing N N 136 G4P O3D H3D sing N N 137 GLN N CA sing N N 138 GLN N H sing N N 139 GLN N H2 sing N N 140 GLN CA C sing N N 141 GLN CA CB sing N N 142 GLN CA HA sing N N 143 GLN C O doub N N 144 GLN C OXT sing N N 145 GLN CB CG sing N N 146 GLN CB HB2 sing N N 147 GLN CB HB3 sing N N 148 GLN CG CD sing N N 149 GLN CG HG2 sing N N 150 GLN CG HG3 sing N N 151 GLN CD OE1 doub N N 152 GLN CD NE2 sing N N 153 GLN NE2 HE21 sing N N 154 GLN NE2 HE22 sing N N 155 GLN OXT HXT sing N N 156 GLU N CA sing N N 157 GLU N H sing N N 158 GLU N H2 sing N N 159 GLU CA C sing N N 160 GLU CA CB sing N N 161 GLU CA HA sing N N 162 GLU C O doub N N 163 GLU C OXT sing N N 164 GLU CB CG sing N N 165 GLU CB HB2 sing N N 166 GLU CB HB3 sing N N 167 GLU CG CD sing N N 168 GLU CG HG2 sing N N 169 GLU CG HG3 sing N N 170 GLU CD OE1 doub N N 171 GLU CD OE2 sing N N 172 GLU OE2 HE2 sing N N 173 GLU OXT HXT sing N N 174 GLY N CA sing N N 175 GLY N H sing N N 176 GLY N H2 sing N N 177 GLY CA C sing N N 178 GLY CA HA2 sing N N 179 GLY CA HA3 sing N N 180 GLY C O doub N N 181 GLY C OXT sing N N 182 GLY OXT HXT sing N N 183 HIS N CA sing N N 184 HIS N H sing N N 185 HIS N H2 sing N N 186 HIS CA C sing N N 187 HIS CA CB sing N N 188 HIS CA HA sing N N 189 HIS C O doub N N 190 HIS C OXT sing N N 191 HIS CB CG sing N N 192 HIS CB HB2 sing N N 193 HIS CB HB3 sing N N 194 HIS CG ND1 sing Y N 195 HIS CG CD2 doub Y N 196 HIS ND1 CE1 doub Y N 197 HIS ND1 HD1 sing N N 198 HIS CD2 NE2 sing Y N 199 HIS CD2 HD2 sing N N 200 HIS CE1 NE2 sing Y N 201 HIS CE1 HE1 sing N N 202 HIS NE2 HE2 sing N N 203 HIS OXT HXT sing N N 204 HOH O H1 sing N N 205 HOH O H2 sing N N 206 ILE N CA sing N N 207 ILE N H sing N N 208 ILE N H2 sing N N 209 ILE CA C sing N N 210 ILE CA CB sing N N 211 ILE CA HA sing N N 212 ILE C O doub N N 213 ILE C OXT sing N N 214 ILE CB CG1 sing N N 215 ILE CB CG2 sing N N 216 ILE CB HB sing N N 217 ILE CG1 CD1 sing N N 218 ILE CG1 HG12 sing N N 219 ILE CG1 HG13 sing N N 220 ILE CG2 HG21 sing N N 221 ILE CG2 HG22 sing N N 222 ILE CG2 HG23 sing N N 223 ILE CD1 HD11 sing N N 224 ILE CD1 HD12 sing N N 225 ILE CD1 HD13 sing N N 226 ILE OXT HXT sing N N 227 LEU N CA sing N N 228 LEU N H sing N N 229 LEU N H2 sing N N 230 LEU CA C sing N N 231 LEU CA CB sing N N 232 LEU CA HA sing N N 233 LEU C O doub N N 234 LEU C OXT sing N N 235 LEU CB CG sing N N 236 LEU CB HB2 sing N N 237 LEU CB HB3 sing N N 238 LEU CG CD1 sing N N 239 LEU CG CD2 sing N N 240 LEU CG HG sing N N 241 LEU CD1 HD11 sing N N 242 LEU CD1 HD12 sing N N 243 LEU CD1 HD13 sing N N 244 LEU CD2 HD21 sing N N 245 LEU CD2 HD22 sing N N 246 LEU CD2 HD23 sing N N 247 LEU OXT HXT sing N N 248 LYS N CA sing N N 249 LYS N H sing N N 250 LYS N H2 sing N N 251 LYS CA C sing N N 252 LYS CA CB sing N N 253 LYS CA HA sing N N 254 LYS C O doub N N 255 LYS C OXT sing N N 256 LYS CB CG sing N N 257 LYS CB HB2 sing N N 258 LYS CB HB3 sing N N 259 LYS CG CD sing N N 260 LYS CG HG2 sing N N 261 LYS CG HG3 sing N N 262 LYS CD CE sing N N 263 LYS CD HD2 sing N N 264 LYS CD HD3 sing N N 265 LYS CE NZ sing N N 266 LYS CE HE2 sing N N 267 LYS CE HE3 sing N N 268 LYS NZ HZ1 sing N N 269 LYS NZ HZ2 sing N N 270 LYS NZ HZ3 sing N N 271 LYS OXT HXT sing N N 272 MET N CA sing N N 273 MET N H sing N N 274 MET N H2 sing N N 275 MET CA C sing N N 276 MET CA CB sing N N 277 MET CA HA sing N N 278 MET C O doub N N 279 MET C OXT sing N N 280 MET CB CG sing N N 281 MET CB HB2 sing N N 282 MET CB HB3 sing N N 283 MET CG SD sing N N 284 MET CG HG2 sing N N 285 MET CG HG3 sing N N 286 MET SD CE sing N N 287 MET CE HE1 sing N N 288 MET CE HE2 sing N N 289 MET CE HE3 sing N N 290 MET OXT HXT sing N N 291 PHE N CA sing N N 292 PHE N H sing N N 293 PHE N H2 sing N N 294 PHE CA C sing N N 295 PHE CA CB sing N N 296 PHE CA HA sing N N 297 PHE C O doub N N 298 PHE C OXT sing N N 299 PHE CB CG sing N N 300 PHE CB HB2 sing N N 301 PHE CB HB3 sing N N 302 PHE CG CD1 doub Y N 303 PHE CG CD2 sing Y N 304 PHE CD1 CE1 sing Y N 305 PHE CD1 HD1 sing N N 306 PHE CD2 CE2 doub Y N 307 PHE CD2 HD2 sing N N 308 PHE CE1 CZ doub Y N 309 PHE CE1 HE1 sing N N 310 PHE CE2 CZ sing Y N 311 PHE CE2 HE2 sing N N 312 PHE CZ HZ sing N N 313 PHE OXT HXT sing N N 314 PRO N CA sing N N 315 PRO N CD sing N N 316 PRO N H sing N N 317 PRO CA C sing N N 318 PRO CA CB sing N N 319 PRO CA HA sing N N 320 PRO C O doub N N 321 PRO C OXT sing N N 322 PRO CB CG sing N N 323 PRO CB HB2 sing N N 324 PRO CB HB3 sing N N 325 PRO CG CD sing N N 326 PRO CG HG2 sing N N 327 PRO CG HG3 sing N N 328 PRO CD HD2 sing N N 329 PRO CD HD3 sing N N 330 PRO OXT HXT sing N N 331 SER N CA sing N N 332 SER N H sing N N 333 SER N H2 sing N N 334 SER CA C sing N N 335 SER CA CB sing N N 336 SER CA HA sing N N 337 SER C O doub N N 338 SER C OXT sing N N 339 SER CB OG sing N N 340 SER CB HB2 sing N N 341 SER CB HB3 sing N N 342 SER OG HG sing N N 343 SER OXT HXT sing N N 344 THR N CA sing N N 345 THR N H sing N N 346 THR N H2 sing N N 347 THR CA C sing N N 348 THR CA CB sing N N 349 THR CA HA sing N N 350 THR C O doub N N 351 THR C OXT sing N N 352 THR CB OG1 sing N N 353 THR CB CG2 sing N N 354 THR CB HB sing N N 355 THR OG1 HG1 sing N N 356 THR CG2 HG21 sing N N 357 THR CG2 HG22 sing N N 358 THR CG2 HG23 sing N N 359 THR OXT HXT sing N N 360 TRP N CA sing N N 361 TRP N H sing N N 362 TRP N H2 sing N N 363 TRP CA C sing N N 364 TRP CA CB sing N N 365 TRP CA HA sing N N 366 TRP C O doub N N 367 TRP C OXT sing N N 368 TRP CB CG sing N N 369 TRP CB HB2 sing N N 370 TRP CB HB3 sing N N 371 TRP CG CD1 doub Y N 372 TRP CG CD2 sing Y N 373 TRP CD1 NE1 sing Y N 374 TRP CD1 HD1 sing N N 375 TRP CD2 CE2 doub Y N 376 TRP CD2 CE3 sing Y N 377 TRP NE1 CE2 sing Y N 378 TRP NE1 HE1 sing N N 379 TRP CE2 CZ2 sing Y N 380 TRP CE3 CZ3 doub Y N 381 TRP CE3 HE3 sing N N 382 TRP CZ2 CH2 doub Y N 383 TRP CZ2 HZ2 sing N N 384 TRP CZ3 CH2 sing Y N 385 TRP CZ3 HZ3 sing N N 386 TRP CH2 HH2 sing N N 387 TRP OXT HXT sing N N 388 TYR N CA sing N N 389 TYR N H sing N N 390 TYR N H2 sing N N 391 TYR CA C sing N N 392 TYR CA CB sing N N 393 TYR CA HA sing N N 394 TYR C O doub N N 395 TYR C OXT sing N N 396 TYR CB CG sing N N 397 TYR CB HB2 sing N N 398 TYR CB HB3 sing N N 399 TYR CG CD1 doub Y N 400 TYR CG CD2 sing Y N 401 TYR CD1 CE1 sing Y N 402 TYR CD1 HD1 sing N N 403 TYR CD2 CE2 doub Y N 404 TYR CD2 HD2 sing N N 405 TYR CE1 CZ doub Y N 406 TYR CE1 HE1 sing N N 407 TYR CE2 CZ sing Y N 408 TYR CE2 HE2 sing N N 409 TYR CZ OH sing N N 410 TYR OH HH sing N N 411 TYR OXT HXT sing N N 412 VAL N CA sing N N 413 VAL N H sing N N 414 VAL N H2 sing N N 415 VAL CA C sing N N 416 VAL CA CB sing N N 417 VAL CA HA sing N N 418 VAL C O doub N N 419 VAL C OXT sing N N 420 VAL CB CG1 sing N N 421 VAL CB CG2 sing N N 422 VAL CB HB sing N N 423 VAL CG1 HG11 sing N N 424 VAL CG1 HG12 sing N N 425 VAL CG1 HG13 sing N N 426 VAL CG2 HG21 sing N N 427 VAL CG2 HG22 sing N N 428 VAL CG2 HG23 sing N N 429 VAL OXT HXT sing N N 430 # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 32071210 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 G4P ? ? G4P ? ? 'SUBJECT OF INVESTIGATION' ? 2 MG ? ? MG ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5',3'-TETRAPHOSPHATE" G4P 3 'MAGNESIUM ION' MG 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5EE0 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details monomer #