data_7YAD # _entry.id 7YAD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.360 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7YAD pdb_00007yad 10.2210/pdb7yad/pdb WWPDB D_1300030544 ? ? EMDB EMD-33709 ? ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of S309-RBD-RBD-S309 in the S309-bound Omicron spike protein (local refinement)' _pdbx_database_related.db_id EMD-33709 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7YAD _pdbx_database_status.recvd_initial_deposition_date 2022-06-27 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Zhao, Z.N.' 1 ? 'Xie, Y.F.' 2 ? 'Qi, J.X.' 3 ? 'Gao, F.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 13 _citation.language ? _citation.page_first 4958 _citation.page_last 4958 _citation.title 'Omicron SARS-CoV-2 mutations stabilize spike up-RBD conformation and lead to a non-RBM-binding monoclonal antibody escape.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-022-32665-7 _citation.pdbx_database_id_PubMed 36002453 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhao, Z.' 1 ? primary 'Zhou, J.' 2 ? primary 'Tian, M.' 3 ? primary 'Huang, M.' 4 ? primary 'Liu, S.' 5 ? primary 'Xie, Y.' 6 ? primary 'Han, P.' 7 ? primary 'Bai, C.' 8 ? primary 'Han, P.' 9 ? primary 'Zheng, A.' 10 ? primary 'Fu, L.' 11 ? primary 'Gao, Y.' 12 ? primary 'Peng, Q.' 13 ? primary 'Li, Y.' 14 ? primary 'Chai, Y.' 15 ? primary 'Zhang, Z.' 16 ? primary 'Zhao, X.' 17 ? primary 'Song, H.' 18 ? primary 'Qi, J.' 19 ? primary 'Wang, Q.' 20 ? primary 'Wang, P.' 21 ? primary 'Gao, G.F.' 22 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'S309 neutralizing antibody heavy chain' 13918.448 2 ? ? ? ? 2 polymer man 'S309 neutralizing antibody light chain' 11601.871 2 ? ? ? ? 3 polymer man 'Spike protein S1' 22749.773 2 ? ? ? ? 4 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose' 570.542 2 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'S glycoprotein,E2,Peplomer protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGY MELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVS ; ;QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGY MELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVS ; A,C ? 2 'polypeptide(L)' no no ;EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLE PEDFAVYYCQQHDTSLTFGGGTKVEIKR ; ;EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLE PEDFAVYYCQQHDTSLTFGGGTKVEIKR ; B,D ? 3 'polypeptide(L)' no no ;PNITNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQ IAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCY FPLRSYSFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKK ; ;PNITNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQ IAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCY FPLRSYSFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKK ; M,E ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 VAL n 1 3 GLN n 1 4 LEU n 1 5 VAL n 1 6 GLN n 1 7 SER n 1 8 GLY n 1 9 ALA n 1 10 GLU n 1 11 VAL n 1 12 LYS n 1 13 LYS n 1 14 PRO n 1 15 GLY n 1 16 ALA n 1 17 SER n 1 18 VAL n 1 19 LYS n 1 20 VAL n 1 21 SER n 1 22 CYS n 1 23 LYS n 1 24 ALA n 1 25 SER n 1 26 GLY n 1 27 TYR n 1 28 PRO n 1 29 PHE n 1 30 THR n 1 31 SER n 1 32 TYR n 1 33 GLY n 1 34 ILE n 1 35 SER n 1 36 TRP n 1 37 VAL n 1 38 ARG n 1 39 GLN n 1 40 ALA n 1 41 PRO n 1 42 GLY n 1 43 GLN n 1 44 GLY n 1 45 LEU n 1 46 GLU n 1 47 TRP n 1 48 MET n 1 49 GLY n 1 50 TRP n 1 51 ILE n 1 52 SER n 1 53 THR n 1 54 TYR n 1 55 ASN n 1 56 GLY n 1 57 ASN n 1 58 THR n 1 59 ASN n 1 60 TYR n 1 61 ALA n 1 62 GLN n 1 63 LYS n 1 64 PHE n 1 65 GLN n 1 66 GLY n 1 67 ARG n 1 68 VAL n 1 69 THR n 1 70 MET n 1 71 THR n 1 72 THR n 1 73 ASP n 1 74 THR n 1 75 SER n 1 76 THR n 1 77 THR n 1 78 THR n 1 79 GLY n 1 80 TYR n 1 81 MET n 1 82 GLU n 1 83 LEU n 1 84 ARG n 1 85 ARG n 1 86 LEU n 1 87 ARG n 1 88 SER n 1 89 ASP n 1 90 ASP n 1 91 THR n 1 92 ALA n 1 93 VAL n 1 94 TYR n 1 95 TYR n 1 96 CYS n 1 97 ALA n 1 98 ARG n 1 99 ASP n 1 100 TYR n 1 101 THR n 1 102 ARG n 1 103 GLY n 1 104 ALA n 1 105 TRP n 1 106 PHE n 1 107 GLY n 1 108 GLU n 1 109 SER n 1 110 LEU n 1 111 ILE n 1 112 GLY n 1 113 GLY n 1 114 PHE n 1 115 ASP n 1 116 ASN n 1 117 TRP n 1 118 GLY n 1 119 GLN n 1 120 GLY n 1 121 THR n 1 122 LEU n 1 123 VAL n 1 124 THR n 1 125 VAL n 1 126 SER n 2 1 GLU n 2 2 ILE n 2 3 VAL n 2 4 LEU n 2 5 THR n 2 6 GLN n 2 7 SER n 2 8 PRO n 2 9 GLY n 2 10 THR n 2 11 LEU n 2 12 SER n 2 13 LEU n 2 14 SER n 2 15 PRO n 2 16 GLY n 2 17 GLU n 2 18 ARG n 2 19 ALA n 2 20 THR n 2 21 LEU n 2 22 SER n 2 23 CYS n 2 24 ARG n 2 25 ALA n 2 26 SER n 2 27 GLN n 2 28 THR n 2 29 VAL n 2 30 SER n 2 31 SER n 2 32 THR n 2 33 SER n 2 34 LEU n 2 35 ALA n 2 36 TRP n 2 37 TYR n 2 38 GLN n 2 39 GLN n 2 40 LYS n 2 41 PRO n 2 42 GLY n 2 43 GLN n 2 44 ALA n 2 45 PRO n 2 46 ARG n 2 47 LEU n 2 48 LEU n 2 49 ILE n 2 50 TYR n 2 51 GLY n 2 52 ALA n 2 53 SER n 2 54 SER n 2 55 ARG n 2 56 ALA n 2 57 THR n 2 58 GLY n 2 59 ILE n 2 60 PRO n 2 61 ASP n 2 62 ARG n 2 63 PHE n 2 64 SER n 2 65 GLY n 2 66 SER n 2 67 GLY n 2 68 SER n 2 69 GLY n 2 70 THR n 2 71 ASP n 2 72 PHE n 2 73 THR n 2 74 LEU n 2 75 THR n 2 76 ILE n 2 77 SER n 2 78 ARG n 2 79 LEU n 2 80 GLU n 2 81 PRO n 2 82 GLU n 2 83 ASP n 2 84 PHE n 2 85 ALA n 2 86 VAL n 2 87 TYR n 2 88 TYR n 2 89 CYS n 2 90 GLN n 2 91 GLN n 2 92 HIS n 2 93 ASP n 2 94 THR n 2 95 SER n 2 96 LEU n 2 97 THR n 2 98 PHE n 2 99 GLY n 2 100 GLY n 2 101 GLY n 2 102 THR n 2 103 LYS n 2 104 VAL n 2 105 GLU n 2 106 ILE n 2 107 LYS n 2 108 ARG n 3 1 PRO n 3 2 ASN n 3 3 ILE n 3 4 THR n 3 5 ASN n 3 6 LEU n 3 7 CYS n 3 8 PRO n 3 9 PHE n 3 10 ASP n 3 11 GLU n 3 12 VAL n 3 13 PHE n 3 14 ASN n 3 15 ALA n 3 16 THR n 3 17 ARG n 3 18 PHE n 3 19 ALA n 3 20 SER n 3 21 VAL n 3 22 TYR n 3 23 ALA n 3 24 TRP n 3 25 ASN n 3 26 ARG n 3 27 LYS n 3 28 ARG n 3 29 ILE n 3 30 SER n 3 31 ASN n 3 32 CYS n 3 33 VAL n 3 34 ALA n 3 35 ASP n 3 36 TYR n 3 37 SER n 3 38 VAL n 3 39 LEU n 3 40 TYR n 3 41 ASN n 3 42 LEU n 3 43 ALA n 3 44 PRO n 3 45 PHE n 3 46 PHE n 3 47 THR n 3 48 PHE n 3 49 LYS n 3 50 CYS n 3 51 TYR n 3 52 GLY n 3 53 VAL n 3 54 SER n 3 55 PRO n 3 56 THR n 3 57 LYS n 3 58 LEU n 3 59 ASN n 3 60 ASP n 3 61 LEU n 3 62 CYS n 3 63 PHE n 3 64 THR n 3 65 ASN n 3 66 VAL n 3 67 TYR n 3 68 ALA n 3 69 ASP n 3 70 SER n 3 71 PHE n 3 72 VAL n 3 73 ILE n 3 74 ARG n 3 75 GLY n 3 76 ASP n 3 77 GLU n 3 78 VAL n 3 79 ARG n 3 80 GLN n 3 81 ILE n 3 82 ALA n 3 83 PRO n 3 84 GLY n 3 85 GLN n 3 86 THR n 3 87 GLY n 3 88 ASN n 3 89 ILE n 3 90 ALA n 3 91 ASP n 3 92 TYR n 3 93 ASN n 3 94 TYR n 3 95 LYS n 3 96 LEU n 3 97 PRO n 3 98 ASP n 3 99 ASP n 3 100 PHE n 3 101 THR n 3 102 GLY n 3 103 CYS n 3 104 VAL n 3 105 ILE n 3 106 ALA n 3 107 TRP n 3 108 ASN n 3 109 SER n 3 110 ASN n 3 111 LYS n 3 112 LEU n 3 113 ASP n 3 114 SER n 3 115 LYS n 3 116 VAL n 3 117 SER n 3 118 GLY n 3 119 ASN n 3 120 TYR n 3 121 ASN n 3 122 TYR n 3 123 LEU n 3 124 TYR n 3 125 ARG n 3 126 LEU n 3 127 PHE n 3 128 ARG n 3 129 LYS n 3 130 SER n 3 131 ASN n 3 132 LEU n 3 133 LYS n 3 134 PRO n 3 135 PHE n 3 136 GLU n 3 137 ARG n 3 138 ASP n 3 139 ILE n 3 140 SER n 3 141 THR n 3 142 GLU n 3 143 ILE n 3 144 TYR n 3 145 GLN n 3 146 ALA n 3 147 GLY n 3 148 ASN n 3 149 LYS n 3 150 PRO n 3 151 CYS n 3 152 ASN n 3 153 GLY n 3 154 VAL n 3 155 ALA n 3 156 GLY n 3 157 PHE n 3 158 ASN n 3 159 CYS n 3 160 TYR n 3 161 PHE n 3 162 PRO n 3 163 LEU n 3 164 ARG n 3 165 SER n 3 166 TYR n 3 167 SER n 3 168 PHE n 3 169 ARG n 3 170 PRO n 3 171 THR n 3 172 TYR n 3 173 GLY n 3 174 VAL n 3 175 GLY n 3 176 HIS n 3 177 GLN n 3 178 PRO n 3 179 TYR n 3 180 ARG n 3 181 VAL n 3 182 VAL n 3 183 VAL n 3 184 LEU n 3 185 SER n 3 186 PHE n 3 187 GLU n 3 188 LEU n 3 189 LEU n 3 190 HIS n 3 191 ALA n 3 192 PRO n 3 193 ALA n 3 194 THR n 3 195 VAL n 3 196 CYS n 3 197 GLY n 3 198 PRO n 3 199 LYS n 3 200 LYS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 126 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 108 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 200 ? ? 'S, 2' ? ? ? ? ? ? 'Severe acute respiratory syndrome coronavirus 2' 2697049 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 7YAD 7YAD ? 1 ? 1 2 PDB 7YAD 7YAD ? 2 ? 1 3 UNP SPIKE_SARS2 P0DTC2 ? 3 ;PNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQ IAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCY FPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKK ; 330 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7YAD A 1 ? 126 ? 7YAD 1 ? 126 ? 1 126 2 2 7YAD B 1 ? 108 ? 7YAD 1 ? 108 ? 1 108 3 3 7YAD M 1 ? 200 ? P0DTC2 330 ? 529 ? 330 529 4 1 7YAD C 1 ? 126 ? 7YAD 1 ? 126 ? 1 126 5 2 7YAD D 1 ? 108 ? 7YAD 1 ? 108 ? 1 108 6 3 7YAD E 1 ? 200 ? P0DTC2 330 ? 529 ? 330 529 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 3 7YAD ASP M 10 ? UNP P0DTC2 GLY 339 variant 339 1 3 7YAD LEU M 42 ? UNP P0DTC2 SER 371 variant 371 2 3 7YAD PRO M 44 ? UNP P0DTC2 SER 373 variant 373 3 3 7YAD PHE M 46 ? UNP P0DTC2 SER 375 variant 375 4 3 7YAD ASN M 88 ? UNP P0DTC2 LYS 417 variant 417 5 3 7YAD LYS M 111 ? UNP P0DTC2 ASN 440 variant 440 6 3 7YAD SER M 117 ? UNP P0DTC2 GLY 446 variant 446 7 3 7YAD ASN M 148 ? UNP P0DTC2 SER 477 variant 477 8 3 7YAD LYS M 149 ? UNP P0DTC2 THR 478 variant 478 9 3 7YAD ALA M 155 ? UNP P0DTC2 GLU 484 variant 484 10 3 7YAD ARG M 164 ? UNP P0DTC2 GLN 493 variant 493 11 3 7YAD SER M 167 ? UNP P0DTC2 GLY 496 variant 496 12 3 7YAD ARG M 169 ? UNP P0DTC2 GLN 498 variant 498 13 3 7YAD TYR M 172 ? UNP P0DTC2 ASN 501 variant 501 14 3 7YAD HIS M 176 ? UNP P0DTC2 TYR 505 variant 505 15 6 7YAD ASP E 10 ? UNP P0DTC2 GLY 339 variant 339 16 6 7YAD LEU E 42 ? UNP P0DTC2 SER 371 variant 371 17 6 7YAD PRO E 44 ? UNP P0DTC2 SER 373 variant 373 18 6 7YAD PHE E 46 ? UNP P0DTC2 SER 375 variant 375 19 6 7YAD ASN E 88 ? UNP P0DTC2 LYS 417 variant 417 20 6 7YAD LYS E 111 ? UNP P0DTC2 ASN 440 variant 440 21 6 7YAD SER E 117 ? UNP P0DTC2 GLY 446 variant 446 22 6 7YAD ASN E 148 ? UNP P0DTC2 SER 477 variant 477 23 6 7YAD LYS E 149 ? UNP P0DTC2 THR 478 variant 478 24 6 7YAD ALA E 155 ? UNP P0DTC2 GLU 484 variant 484 25 6 7YAD ARG E 164 ? UNP P0DTC2 GLN 493 variant 493 26 6 7YAD SER E 167 ? UNP P0DTC2 GLY 496 variant 496 27 6 7YAD ARG E 169 ? UNP P0DTC2 GLN 498 variant 498 28 6 7YAD TYR E 172 ? UNP P0DTC2 ASN 501 variant 501 29 6 7YAD HIS E 176 ? UNP P0DTC2 TYR 505 variant 505 30 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7YAD _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 7YAD _struct.title 'Cryo-EM structure of S309-RBD-RBD-S309 in the S309-bound Omicron spike protein (local refinement)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7YAD _struct_keywords.text 'SARS-CoV-2, Omicron, spike protein, S309 antibody, VIRAL PROTEIN, IMMUNE SYSTEM-VIRAL PROTEIN complex' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM/VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLN A 62 ? GLN A 65 ? GLN A 62 GLN A 65 5 ? 4 HELX_P HELX_P2 AA2 ARG A 87 ? THR A 91 ? ARG A 87 THR A 91 5 ? 5 HELX_P HELX_P3 AA3 PHE C 9 ? ASN C 14 ? PHE M 338 ASN M 343 1 ? 6 HELX_P HELX_P4 AA4 SER C 20 ? TRP C 24 ? SER M 349 TRP M 353 5 ? 5 HELX_P HELX_P5 AA5 TYR C 36 ? ASN C 41 ? TYR M 365 ASN M 370 1 ? 6 HELX_P HELX_P6 AA6 PRO C 55 ? LEU C 61 ? PRO M 384 LEU M 390 5 ? 7 HELX_P HELX_P7 AA7 ASP C 76 ? ILE C 81 ? ASP M 405 ILE M 410 5 ? 6 HELX_P HELX_P8 AA8 GLY C 87 ? ASN C 93 ? GLY M 416 ASN M 422 1 ? 7 HELX_P HELX_P9 AA9 SER C 109 ? SER C 114 ? SER M 438 SER M 443 1 ? 6 HELX_P HELX_P10 AB1 GLY C 173 ? HIS C 176 ? GLY M 502 HIS M 505 5 ? 4 HELX_P HELX_P11 AB2 ARG D 87 ? THR D 91 ? ARG C 87 THR C 91 5 ? 5 HELX_P HELX_P12 AB3 SER E 30 ? THR E 32 ? SER D 30 THR D 32 5 ? 3 HELX_P HELX_P13 AB4 PHE F 9 ? ASN F 14 ? PHE E 338 ASN E 343 1 ? 6 HELX_P HELX_P14 AB5 SER F 54 ? LEU F 61 ? SER E 383 LEU E 390 5 ? 8 HELX_P HELX_P15 AB6 ARG F 74 ? ILE F 81 ? ARG E 403 ILE E 410 5 ? 8 HELX_P HELX_P16 AB7 GLY F 87 ? ASN F 93 ? GLY E 416 ASN E 422 1 ? 7 HELX_P HELX_P17 AB8 SER F 109 ? SER F 114 ? SER E 438 SER E 443 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 96 SG ? ? A CYS 22 A CYS 96 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf2 disulf ? ? B CYS 23 SG ? ? ? 1_555 B CYS 89 SG ? ? B CYS 23 B CYS 89 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf3 disulf ? ? C CYS 7 SG ? ? ? 1_555 C CYS 32 SG ? ? M CYS 336 M CYS 361 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf4 disulf ? ? C CYS 50 SG ? ? ? 1_555 C CYS 103 SG ? ? M CYS 379 M CYS 432 1_555 ? ? ? ? ? ? ? 2.043 ? ? disulf5 disulf ? ? C CYS 151 SG ? ? ? 1_555 C CYS 159 SG ? ? M CYS 480 M CYS 488 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf6 disulf ? ? D CYS 22 SG ? ? ? 1_555 D CYS 96 SG ? ? C CYS 22 C CYS 96 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf7 disulf ? ? E CYS 23 SG ? ? ? 1_555 E CYS 89 SG ? ? D CYS 23 D CYS 89 1_555 ? ? ? ? ? ? ? 2.038 ? ? disulf8 disulf ? ? F CYS 7 SG ? ? ? 1_555 F CYS 32 SG ? ? E CYS 336 E CYS 361 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf9 disulf ? ? F CYS 50 SG ? ? ? 1_555 F CYS 103 SG ? ? E CYS 379 E CYS 432 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf10 disulf ? ? F CYS 151 SG ? ? ? 1_555 F CYS 159 SG ? ? E CYS 480 E CYS 488 1_555 ? ? ? ? ? ? ? 2.031 ? ? covale1 covale one ? C ASN 14 ND2 ? ? ? 1_555 G NAG . C1 ? ? M ASN 343 F NAG 1 1_555 ? ? ? ? ? ? ? 1.441 ? N-Glycosylation covale2 covale one ? F ASN 14 ND2 ? ? ? 1_555 H NAG . C1 ? ? E ASN 343 G NAG 1 1_555 ? ? ? ? ? ? ? 1.443 ? N-Glycosylation covale3 covale both ? G NAG . O4 ? ? ? 1_555 G NAG . C1 ? ? F NAG 1 F NAG 2 1_555 ? ? ? ? ? ? ? 1.441 ? ? covale4 covale both ? G NAG . O6 ? ? ? 1_555 G FUC . C1 ? ? F NAG 1 F FUC 3 1_555 ? ? ? ? ? ? ? 1.439 ? ? covale5 covale both ? H NAG . O4 ? ? ? 1_555 H NAG . C1 ? ? G NAG 1 G NAG 2 1_555 ? ? ? ? ? ? ? 1.440 ? ? covale6 covale both ? H NAG . O6 ? ? ? 1_555 H FUC . C1 ? ? G NAG 1 G FUC 3 1_555 ? ? ? ? ? ? ? 1.437 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 7 B . ? SER 7 B PRO 8 B ? PRO 8 B 1 -2.90 2 SER 7 E . ? SER 7 D PRO 8 E ? PRO 8 D 1 0.34 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 5 ? AA3 ? 5 ? AA4 ? 3 ? AA5 ? 6 ? AA6 ? 5 ? AA7 ? 2 ? AA8 ? 2 ? AA9 ? 4 ? AB1 ? 5 ? AB2 ? 5 ? AB3 ? 4 ? AB4 ? 6 ? AB5 ? 4 ? AB6 ? 5 ? AB7 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA5 1 2 ? parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel AA5 5 6 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA6 4 5 ? anti-parallel AA7 1 2 ? anti-parallel AA8 1 2 ? anti-parallel AA9 1 2 ? anti-parallel AA9 2 3 ? anti-parallel AA9 3 4 ? anti-parallel AB1 1 2 ? anti-parallel AB1 2 3 ? anti-parallel AB1 3 4 ? anti-parallel AB1 4 5 ? anti-parallel AB2 1 2 ? anti-parallel AB2 2 3 ? anti-parallel AB2 3 4 ? anti-parallel AB2 4 5 ? anti-parallel AB3 1 2 ? anti-parallel AB3 2 3 ? anti-parallel AB3 3 4 ? anti-parallel AB4 1 2 ? parallel AB4 2 3 ? anti-parallel AB4 3 4 ? anti-parallel AB4 4 5 ? anti-parallel AB4 5 6 ? anti-parallel AB5 1 2 ? parallel AB5 2 3 ? anti-parallel AB5 3 4 ? anti-parallel AB6 1 2 ? anti-parallel AB6 2 3 ? anti-parallel AB6 3 4 ? anti-parallel AB6 4 5 ? anti-parallel AB7 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 3 ? GLN A 6 ? GLN A 3 GLN A 6 AA1 2 VAL A 18 ? SER A 25 ? VAL A 18 SER A 25 AA1 3 THR A 78 ? LEU A 83 ? THR A 78 LEU A 83 AA1 4 VAL A 68 ? ASP A 73 ? VAL A 68 ASP A 73 AA2 1 THR A 58 ? TYR A 60 ? THR A 58 TYR A 60 AA2 2 LEU A 45 ? ILE A 51 ? LEU A 45 ILE A 51 AA2 3 GLY A 33 ? GLN A 39 ? GLY A 33 GLN A 39 AA2 4 ALA A 92 ? ASP A 99 ? ALA A 92 ASP A 99 AA2 5 ASN A 116 ? TRP A 117 ? ASN A 116 TRP A 117 AA3 1 THR A 58 ? TYR A 60 ? THR A 58 TYR A 60 AA3 2 LEU A 45 ? ILE A 51 ? LEU A 45 ILE A 51 AA3 3 GLY A 33 ? GLN A 39 ? GLY A 33 GLN A 39 AA3 4 ALA A 92 ? ASP A 99 ? ALA A 92 ASP A 99 AA3 5 THR A 121 ? VAL A 123 ? THR A 121 VAL A 123 AA4 1 LEU B 4 ? THR B 5 ? LEU B 4 THR B 5 AA4 2 ALA B 19 ? VAL B 29 ? ALA B 19 VAL B 29 AA4 3 PHE B 63 ? ILE B 76 ? PHE B 63 ILE B 76 AA5 1 THR B 10 ? SER B 12 ? THR B 10 SER B 12 AA5 2 THR B 102 ? GLU B 105 ? THR B 102 GLU B 105 AA5 3 VAL B 86 ? GLN B 91 ? VAL B 86 GLN B 91 AA5 4 LEU B 34 ? GLN B 39 ? LEU B 34 GLN B 39 AA5 5 ARG B 46 ? TYR B 50 ? ARG B 46 TYR B 50 AA5 6 SER B 54 ? ARG B 55 ? SER B 54 ARG B 55 AA6 1 ASN C 25 ? ILE C 29 ? ASN M 354 ILE M 358 AA6 2 ASN C 65 ? ARG C 74 ? ASN M 394 ARG M 403 AA6 3 PRO C 178 ? GLU C 187 ? PRO M 507 GLU M 516 AA6 4 GLY C 102 ? ASN C 108 ? GLY M 431 ASN M 437 AA6 5 LYS C 49 ? CYS C 50 ? LYS M 378 CYS M 379 AA7 1 LEU C 123 ? ARG C 125 ? LEU M 452 ARG M 454 AA7 2 LEU C 163 ? SER C 165 ? LEU M 492 SER M 494 AA8 1 TYR C 144 ? GLN C 145 ? TYR M 473 GLN M 474 AA8 2 CYS C 159 ? TYR C 160 ? CYS M 488 TYR M 489 AA9 1 GLN D 3 ? GLN D 6 ? GLN C 3 GLN C 6 AA9 2 VAL D 18 ? SER D 25 ? VAL C 18 SER C 25 AA9 3 THR D 78 ? LEU D 83 ? THR C 78 LEU C 83 AA9 4 VAL D 68 ? ASP D 73 ? VAL C 68 ASP C 73 AB1 1 THR D 58 ? TYR D 60 ? THR C 58 TYR C 60 AB1 2 LEU D 45 ? SER D 52 ? LEU C 45 SER C 52 AB1 3 GLY D 33 ? GLN D 39 ? GLY C 33 GLN C 39 AB1 4 ALA D 92 ? ASP D 99 ? ALA C 92 ASP C 99 AB1 5 ASN D 116 ? TRP D 117 ? ASN C 116 TRP C 117 AB2 1 THR D 58 ? TYR D 60 ? THR C 58 TYR C 60 AB2 2 LEU D 45 ? SER D 52 ? LEU C 45 SER C 52 AB2 3 GLY D 33 ? GLN D 39 ? GLY C 33 GLN C 39 AB2 4 ALA D 92 ? ASP D 99 ? ALA C 92 ASP C 99 AB2 5 THR D 121 ? VAL D 123 ? THR C 121 VAL C 123 AB3 1 LEU E 4 ? GLN E 6 ? LEU D 4 GLN D 6 AB3 2 ALA E 19 ? ALA E 25 ? ALA D 19 ALA D 25 AB3 3 ASP E 71 ? ILE E 76 ? ASP D 71 ILE D 76 AB3 4 PHE E 63 ? SER E 68 ? PHE D 63 SER D 68 AB4 1 THR E 10 ? LEU E 13 ? THR D 10 LEU D 13 AB4 2 THR E 102 ? ILE E 106 ? THR D 102 ILE D 106 AB4 3 VAL E 86 ? GLN E 91 ? VAL D 86 GLN D 91 AB4 4 LEU E 34 ? GLN E 39 ? LEU D 34 GLN D 39 AB4 5 ARG E 46 ? TYR E 50 ? ARG D 46 TYR D 50 AB4 6 SER E 54 ? ARG E 55 ? SER D 54 ARG D 55 AB5 1 THR E 10 ? LEU E 13 ? THR D 10 LEU D 13 AB5 2 THR E 102 ? ILE E 106 ? THR D 102 ILE D 106 AB5 3 VAL E 86 ? GLN E 91 ? VAL D 86 GLN D 91 AB5 4 THR E 97 ? PHE E 98 ? THR D 97 PHE D 98 AB6 1 ASN F 25 ? ILE F 29 ? ASN E 354 ILE E 358 AB6 2 ASN F 65 ? ILE F 73 ? ASN E 394 ILE E 402 AB6 3 TYR F 179 ? GLU F 187 ? TYR E 508 GLU E 516 AB6 4 GLY F 102 ? ASN F 108 ? GLY E 431 ASN E 437 AB6 5 THR F 47 ? TYR F 51 ? THR E 376 TYR E 380 AB7 1 LEU F 123 ? ARG F 125 ? LEU E 452 ARG E 454 AB7 2 LEU F 163 ? SER F 165 ? LEU E 492 SER E 494 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 5 ? N VAL A 5 O LYS A 23 ? O LYS A 23 AA1 2 3 N CYS A 22 ? N CYS A 22 O GLY A 79 ? O GLY A 79 AA1 3 4 O GLU A 82 ? O GLU A 82 N THR A 69 ? N THR A 69 AA2 1 2 O ASN A 59 ? O ASN A 59 N TRP A 50 ? N TRP A 50 AA2 2 3 O MET A 48 ? O MET A 48 N TRP A 36 ? N TRP A 36 AA2 3 4 N VAL A 37 ? N VAL A 37 O TYR A 95 ? O TYR A 95 AA2 4 5 N ARG A 98 ? N ARG A 98 O ASN A 116 ? O ASN A 116 AA3 1 2 O ASN A 59 ? O ASN A 59 N TRP A 50 ? N TRP A 50 AA3 2 3 O MET A 48 ? O MET A 48 N TRP A 36 ? N TRP A 36 AA3 3 4 N VAL A 37 ? N VAL A 37 O TYR A 95 ? O TYR A 95 AA3 4 5 N TYR A 94 ? N TYR A 94 O THR A 121 ? O THR A 121 AA4 1 2 N THR B 5 ? N THR B 5 O ARG B 24 ? O ARG B 24 AA4 2 3 N ALA B 25 ? N ALA B 25 O THR B 70 ? O THR B 70 AA5 1 2 N LEU B 11 ? N LEU B 11 O LYS B 103 ? O LYS B 103 AA5 2 3 O THR B 102 ? O THR B 102 N TYR B 87 ? N TYR B 87 AA5 3 4 O GLN B 90 ? O GLN B 90 N ALA B 35 ? N ALA B 35 AA5 4 5 N TRP B 36 ? N TRP B 36 O ILE B 49 ? O ILE B 49 AA5 5 6 N TYR B 50 ? N TYR B 50 O SER B 54 ? O SER B 54 AA6 1 2 N ILE C 29 ? N ILE M 358 O VAL C 66 ? O VAL M 395 AA6 2 3 N ILE C 73 ? N ILE M 402 O TYR C 179 ? O TYR M 508 AA6 3 4 O LEU C 184 ? O LEU M 513 N CYS C 103 ? N CYS M 432 AA6 4 5 N VAL C 104 ? N VAL M 433 O LYS C 49 ? O LYS M 378 AA7 1 2 N TYR C 124 ? N TYR M 453 O ARG C 164 ? O ARG M 493 AA8 1 2 N TYR C 144 ? N TYR M 473 O TYR C 160 ? O TYR M 489 AA9 1 2 N VAL D 5 ? N VAL C 5 O LYS D 23 ? O LYS C 23 AA9 2 3 N CYS D 22 ? N CYS C 22 O GLY D 79 ? O GLY C 79 AA9 3 4 O GLU D 82 ? O GLU C 82 N THR D 69 ? N THR C 69 AB1 1 2 O ASN D 59 ? O ASN C 59 N TRP D 50 ? N TRP C 50 AB1 2 3 O GLU D 46 ? O GLU C 46 N ARG D 38 ? N ARG C 38 AB1 3 4 N SER D 35 ? N SER C 35 O ALA D 97 ? O ALA C 97 AB1 4 5 N ARG D 98 ? N ARG C 98 O ASN D 116 ? O ASN C 116 AB2 1 2 O ASN D 59 ? O ASN C 59 N TRP D 50 ? N TRP C 50 AB2 2 3 O GLU D 46 ? O GLU C 46 N ARG D 38 ? N ARG C 38 AB2 3 4 N SER D 35 ? N SER C 35 O ALA D 97 ? O ALA C 97 AB2 4 5 N TYR D 94 ? N TYR C 94 O THR D 121 ? O THR C 121 AB3 1 2 N THR E 5 ? N THR D 5 O ARG E 24 ? O ARG D 24 AB3 2 3 N LEU E 21 ? N LEU D 21 O LEU E 74 ? O LEU D 74 AB3 3 4 O THR E 73 ? O THR D 73 N SER E 66 ? N SER D 66 AB4 1 2 N LEU E 11 ? N LEU D 11 O GLU E 105 ? O GLU D 105 AB4 2 3 O THR E 102 ? O THR D 102 N TYR E 87 ? N TYR D 87 AB4 3 4 O GLN E 90 ? O GLN D 90 N ALA E 35 ? N ALA D 35 AB4 4 5 N TRP E 36 ? N TRP D 36 O ILE E 49 ? O ILE D 49 AB4 5 6 N TYR E 50 ? N TYR D 50 O SER E 54 ? O SER D 54 AB5 1 2 N LEU E 11 ? N LEU D 11 O GLU E 105 ? O GLU D 105 AB5 2 3 O THR E 102 ? O THR D 102 N TYR E 87 ? N TYR D 87 AB5 3 4 N GLN E 91 ? N GLN D 91 O THR E 97 ? O THR D 97 AB6 1 2 N ILE F 29 ? N ILE E 358 O VAL F 66 ? O VAL E 395 AB6 2 3 N TYR F 67 ? N TYR E 396 O SER F 185 ? O SER E 514 AB6 3 4 O VAL F 182 ? O VAL E 511 N ILE F 105 ? N ILE E 434 AB6 4 5 O GLY F 102 ? O GLY E 431 N TYR F 51 ? N TYR E 380 AB7 1 2 N TYR F 124 ? N TYR E 453 O ARG F 164 ? O ARG E 493 # _atom_sites.entry_id 7YAD _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 1 1 GLN GLN A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 GLN 6 6 6 GLN GLN A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 PRO 14 14 14 PRO PRO A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 CYS 22 22 22 CYS CYS A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 TYR 27 27 27 TYR TYR A . n A 1 28 PRO 28 28 28 PRO PRO A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 TRP 36 36 36 TRP TRP A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 ARG 38 38 38 ARG ARG A . n A 1 39 GLN 39 39 39 GLN GLN A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 GLN 43 43 43 GLN GLN A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 TRP 47 47 47 TRP TRP A . n A 1 48 MET 48 48 48 MET MET A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 TRP 50 50 50 TRP TRP A . n A 1 51 ILE 51 51 51 ILE ILE A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 THR 53 53 53 THR THR A . n A 1 54 TYR 54 54 54 TYR TYR A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 ASN 57 57 57 ASN ASN A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 TYR 60 60 60 TYR TYR A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 PHE 64 64 64 PHE PHE A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 ARG 67 67 67 ARG ARG A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 MET 70 70 70 MET MET A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 THR 72 72 72 THR THR A . n A 1 73 ASP 73 73 73 ASP ASP A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 SER 75 75 75 SER SER A . n A 1 76 THR 76 76 76 THR THR A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 GLY 79 79 79 GLY GLY A . n A 1 80 TYR 80 80 80 TYR TYR A . n A 1 81 MET 81 81 81 MET MET A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 ARG 84 84 84 ARG ARG A . n A 1 85 ARG 85 85 85 ARG ARG A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 ASP 89 89 89 ASP ASP A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 TYR 94 94 94 TYR TYR A . n A 1 95 TYR 95 95 95 TYR TYR A . n A 1 96 CYS 96 96 96 CYS CYS A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 ASP 99 99 99 ASP ASP A . n A 1 100 TYR 100 100 100 TYR TYR A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 TRP 105 105 105 TRP TRP A . n A 1 106 PHE 106 106 106 PHE PHE A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 GLU 108 108 108 GLU GLU A . n A 1 109 SER 109 109 109 SER SER A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 ILE 111 111 111 ILE ILE A . n A 1 112 GLY 112 112 112 GLY GLY A . n A 1 113 GLY 113 113 113 GLY GLY A . n A 1 114 PHE 114 114 114 PHE PHE A . n A 1 115 ASP 115 115 115 ASP ASP A . n A 1 116 ASN 116 116 116 ASN ASN A . n A 1 117 TRP 117 117 117 TRP TRP A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 GLN 119 119 119 GLN GLN A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 VAL 123 123 123 VAL VAL A . n A 1 124 THR 124 124 124 THR THR A . n A 1 125 VAL 125 125 ? ? ? A . n A 1 126 SER 126 126 ? ? ? A . n B 2 1 GLU 1 1 1 GLU GLU B . n B 2 2 ILE 2 2 2 ILE ILE B . n B 2 3 VAL 3 3 3 VAL VAL B . n B 2 4 LEU 4 4 4 LEU LEU B . n B 2 5 THR 5 5 5 THR THR B . n B 2 6 GLN 6 6 6 GLN GLN B . n B 2 7 SER 7 7 7 SER SER B . n B 2 8 PRO 8 8 8 PRO PRO B . n B 2 9 GLY 9 9 9 GLY GLY B . n B 2 10 THR 10 10 10 THR THR B . n B 2 11 LEU 11 11 11 LEU LEU B . n B 2 12 SER 12 12 12 SER SER B . n B 2 13 LEU 13 13 13 LEU LEU B . n B 2 14 SER 14 14 14 SER SER B . n B 2 15 PRO 15 15 15 PRO PRO B . n B 2 16 GLY 16 16 16 GLY GLY B . n B 2 17 GLU 17 17 17 GLU GLU B . n B 2 18 ARG 18 18 18 ARG ARG B . n B 2 19 ALA 19 19 19 ALA ALA B . n B 2 20 THR 20 20 20 THR THR B . n B 2 21 LEU 21 21 21 LEU LEU B . n B 2 22 SER 22 22 22 SER SER B . n B 2 23 CYS 23 23 23 CYS CYS B . n B 2 24 ARG 24 24 24 ARG ARG B . n B 2 25 ALA 25 25 25 ALA ALA B . n B 2 26 SER 26 26 26 SER SER B . n B 2 27 GLN 27 27 27 GLN GLN B . n B 2 28 THR 28 28 28 THR THR B . n B 2 29 VAL 29 29 29 VAL VAL B . n B 2 30 SER 30 30 30 SER SER B . n B 2 31 SER 31 31 31 SER SER B . n B 2 32 THR 32 32 32 THR THR B . n B 2 33 SER 33 33 33 SER SER B . n B 2 34 LEU 34 34 34 LEU LEU B . n B 2 35 ALA 35 35 35 ALA ALA B . n B 2 36 TRP 36 36 36 TRP TRP B . n B 2 37 TYR 37 37 37 TYR TYR B . n B 2 38 GLN 38 38 38 GLN GLN B . n B 2 39 GLN 39 39 39 GLN GLN B . n B 2 40 LYS 40 40 40 LYS LYS B . n B 2 41 PRO 41 41 41 PRO PRO B . n B 2 42 GLY 42 42 42 GLY GLY B . n B 2 43 GLN 43 43 43 GLN GLN B . n B 2 44 ALA 44 44 44 ALA ALA B . n B 2 45 PRO 45 45 45 PRO PRO B . n B 2 46 ARG 46 46 46 ARG ARG B . n B 2 47 LEU 47 47 47 LEU LEU B . n B 2 48 LEU 48 48 48 LEU LEU B . n B 2 49 ILE 49 49 49 ILE ILE B . n B 2 50 TYR 50 50 50 TYR TYR B . n B 2 51 GLY 51 51 51 GLY GLY B . n B 2 52 ALA 52 52 52 ALA ALA B . n B 2 53 SER 53 53 53 SER SER B . n B 2 54 SER 54 54 54 SER SER B . n B 2 55 ARG 55 55 55 ARG ARG B . n B 2 56 ALA 56 56 56 ALA ALA B . n B 2 57 THR 57 57 57 THR THR B . n B 2 58 GLY 58 58 58 GLY GLY B . n B 2 59 ILE 59 59 59 ILE ILE B . n B 2 60 PRO 60 60 60 PRO PRO B . n B 2 61 ASP 61 61 61 ASP ASP B . n B 2 62 ARG 62 62 62 ARG ARG B . n B 2 63 PHE 63 63 63 PHE PHE B . n B 2 64 SER 64 64 64 SER SER B . n B 2 65 GLY 65 65 65 GLY GLY B . n B 2 66 SER 66 66 66 SER SER B . n B 2 67 GLY 67 67 67 GLY GLY B . n B 2 68 SER 68 68 68 SER SER B . n B 2 69 GLY 69 69 69 GLY GLY B . n B 2 70 THR 70 70 70 THR THR B . n B 2 71 ASP 71 71 71 ASP ASP B . n B 2 72 PHE 72 72 72 PHE PHE B . n B 2 73 THR 73 73 73 THR THR B . n B 2 74 LEU 74 74 74 LEU LEU B . n B 2 75 THR 75 75 75 THR THR B . n B 2 76 ILE 76 76 76 ILE ILE B . n B 2 77 SER 77 77 77 SER SER B . n B 2 78 ARG 78 78 78 ARG ARG B . n B 2 79 LEU 79 79 79 LEU LEU B . n B 2 80 GLU 80 80 80 GLU GLU B . n B 2 81 PRO 81 81 81 PRO PRO B . n B 2 82 GLU 82 82 82 GLU GLU B . n B 2 83 ASP 83 83 83 ASP ASP B . n B 2 84 PHE 84 84 84 PHE PHE B . n B 2 85 ALA 85 85 85 ALA ALA B . n B 2 86 VAL 86 86 86 VAL VAL B . n B 2 87 TYR 87 87 87 TYR TYR B . n B 2 88 TYR 88 88 88 TYR TYR B . n B 2 89 CYS 89 89 89 CYS CYS B . n B 2 90 GLN 90 90 90 GLN GLN B . n B 2 91 GLN 91 91 91 GLN GLN B . n B 2 92 HIS 92 92 92 HIS HIS B . n B 2 93 ASP 93 93 93 ASP ASP B . n B 2 94 THR 94 94 94 THR THR B . n B 2 95 SER 95 95 95 SER SER B . n B 2 96 LEU 96 96 96 LEU LEU B . n B 2 97 THR 97 97 97 THR THR B . n B 2 98 PHE 98 98 98 PHE PHE B . n B 2 99 GLY 99 99 99 GLY GLY B . n B 2 100 GLY 100 100 100 GLY GLY B . n B 2 101 GLY 101 101 101 GLY GLY B . n B 2 102 THR 102 102 102 THR THR B . n B 2 103 LYS 103 103 103 LYS LYS B . n B 2 104 VAL 104 104 104 VAL VAL B . n B 2 105 GLU 105 105 105 GLU GLU B . n B 2 106 ILE 106 106 ? ? ? B . n B 2 107 LYS 107 107 ? ? ? B . n B 2 108 ARG 108 108 ? ? ? B . n C 3 1 PRO 1 330 330 PRO PRO M . n C 3 2 ASN 2 331 331 ASN ASN M . n C 3 3 ILE 3 332 332 ILE ILE M . n C 3 4 THR 4 333 333 THR THR M . n C 3 5 ASN 5 334 334 ASN ASN M . n C 3 6 LEU 6 335 335 LEU LEU M . n C 3 7 CYS 7 336 336 CYS CYS M . n C 3 8 PRO 8 337 337 PRO PRO M . n C 3 9 PHE 9 338 338 PHE PHE M . n C 3 10 ASP 10 339 339 ASP ASP M . n C 3 11 GLU 11 340 340 GLU GLU M . n C 3 12 VAL 12 341 341 VAL VAL M . n C 3 13 PHE 13 342 342 PHE PHE M . n C 3 14 ASN 14 343 343 ASN ASN M . n C 3 15 ALA 15 344 344 ALA ALA M . n C 3 16 THR 16 345 345 THR THR M . n C 3 17 ARG 17 346 346 ARG ARG M . n C 3 18 PHE 18 347 347 PHE PHE M . n C 3 19 ALA 19 348 348 ALA ALA M . n C 3 20 SER 20 349 349 SER SER M . n C 3 21 VAL 21 350 350 VAL VAL M . n C 3 22 TYR 22 351 351 TYR TYR M . n C 3 23 ALA 23 352 352 ALA ALA M . n C 3 24 TRP 24 353 353 TRP TRP M . n C 3 25 ASN 25 354 354 ASN ASN M . n C 3 26 ARG 26 355 355 ARG ARG M . n C 3 27 LYS 27 356 356 LYS LYS M . n C 3 28 ARG 28 357 357 ARG ARG M . n C 3 29 ILE 29 358 358 ILE ILE M . n C 3 30 SER 30 359 359 SER SER M . n C 3 31 ASN 31 360 360 ASN ASN M . n C 3 32 CYS 32 361 361 CYS CYS M . n C 3 33 VAL 33 362 362 VAL VAL M . n C 3 34 ALA 34 363 363 ALA ALA M . n C 3 35 ASP 35 364 364 ASP ASP M . n C 3 36 TYR 36 365 365 TYR TYR M . n C 3 37 SER 37 366 366 SER SER M . n C 3 38 VAL 38 367 367 VAL VAL M . n C 3 39 LEU 39 368 368 LEU LEU M . n C 3 40 TYR 40 369 369 TYR TYR M . n C 3 41 ASN 41 370 370 ASN ASN M . n C 3 42 LEU 42 371 371 LEU LEU M . n C 3 43 ALA 43 372 372 ALA ALA M . n C 3 44 PRO 44 373 373 PRO PRO M . n C 3 45 PHE 45 374 374 PHE PHE M . n C 3 46 PHE 46 375 375 PHE PHE M . n C 3 47 THR 47 376 376 THR THR M . n C 3 48 PHE 48 377 377 PHE PHE M . n C 3 49 LYS 49 378 378 LYS LYS M . n C 3 50 CYS 50 379 379 CYS CYS M . n C 3 51 TYR 51 380 380 TYR TYR M . n C 3 52 GLY 52 381 381 GLY GLY M . n C 3 53 VAL 53 382 382 VAL VAL M . n C 3 54 SER 54 383 383 SER SER M . n C 3 55 PRO 55 384 384 PRO PRO M . n C 3 56 THR 56 385 385 THR THR M . n C 3 57 LYS 57 386 386 LYS LYS M . n C 3 58 LEU 58 387 387 LEU LEU M . n C 3 59 ASN 59 388 388 ASN ASN M . n C 3 60 ASP 60 389 389 ASP ASP M . n C 3 61 LEU 61 390 390 LEU LEU M . n C 3 62 CYS 62 391 391 CYS CYS M . n C 3 63 PHE 63 392 392 PHE PHE M . n C 3 64 THR 64 393 393 THR THR M . n C 3 65 ASN 65 394 394 ASN ASN M . n C 3 66 VAL 66 395 395 VAL VAL M . n C 3 67 TYR 67 396 396 TYR TYR M . n C 3 68 ALA 68 397 397 ALA ALA M . n C 3 69 ASP 69 398 398 ASP ASP M . n C 3 70 SER 70 399 399 SER SER M . n C 3 71 PHE 71 400 400 PHE PHE M . n C 3 72 VAL 72 401 401 VAL VAL M . n C 3 73 ILE 73 402 402 ILE ILE M . n C 3 74 ARG 74 403 403 ARG ARG M . n C 3 75 GLY 75 404 404 GLY GLY M . n C 3 76 ASP 76 405 405 ASP ASP M . n C 3 77 GLU 77 406 406 GLU GLU M . n C 3 78 VAL 78 407 407 VAL VAL M . n C 3 79 ARG 79 408 408 ARG ARG M . n C 3 80 GLN 80 409 409 GLN GLN M . n C 3 81 ILE 81 410 410 ILE ILE M . n C 3 82 ALA 82 411 411 ALA ALA M . n C 3 83 PRO 83 412 412 PRO PRO M . n C 3 84 GLY 84 413 413 GLY GLY M . n C 3 85 GLN 85 414 414 GLN GLN M . n C 3 86 THR 86 415 415 THR THR M . n C 3 87 GLY 87 416 416 GLY GLY M . n C 3 88 ASN 88 417 417 ASN ASN M . n C 3 89 ILE 89 418 418 ILE ILE M . n C 3 90 ALA 90 419 419 ALA ALA M . n C 3 91 ASP 91 420 420 ASP ASP M . n C 3 92 TYR 92 421 421 TYR TYR M . n C 3 93 ASN 93 422 422 ASN ASN M . n C 3 94 TYR 94 423 423 TYR TYR M . n C 3 95 LYS 95 424 424 LYS LYS M . n C 3 96 LEU 96 425 425 LEU LEU M . n C 3 97 PRO 97 426 426 PRO PRO M . n C 3 98 ASP 98 427 427 ASP ASP M . n C 3 99 ASP 99 428 428 ASP ASP M . n C 3 100 PHE 100 429 429 PHE PHE M . n C 3 101 THR 101 430 430 THR THR M . n C 3 102 GLY 102 431 431 GLY GLY M . n C 3 103 CYS 103 432 432 CYS CYS M . n C 3 104 VAL 104 433 433 VAL VAL M . n C 3 105 ILE 105 434 434 ILE ILE M . n C 3 106 ALA 106 435 435 ALA ALA M . n C 3 107 TRP 107 436 436 TRP TRP M . n C 3 108 ASN 108 437 437 ASN ASN M . n C 3 109 SER 109 438 438 SER SER M . n C 3 110 ASN 110 439 439 ASN ASN M . n C 3 111 LYS 111 440 440 LYS LYS M . n C 3 112 LEU 112 441 441 LEU LEU M . n C 3 113 ASP 113 442 442 ASP ASP M . n C 3 114 SER 114 443 443 SER SER M . n C 3 115 LYS 115 444 444 LYS LYS M . n C 3 116 VAL 116 445 445 VAL VAL M . n C 3 117 SER 117 446 446 SER SER M . n C 3 118 GLY 118 447 447 GLY GLY M . n C 3 119 ASN 119 448 448 ASN ASN M . n C 3 120 TYR 120 449 449 TYR TYR M . n C 3 121 ASN 121 450 450 ASN ASN M . n C 3 122 TYR 122 451 451 TYR TYR M . n C 3 123 LEU 123 452 452 LEU LEU M . n C 3 124 TYR 124 453 453 TYR TYR M . n C 3 125 ARG 125 454 454 ARG ARG M . n C 3 126 LEU 126 455 455 LEU LEU M . n C 3 127 PHE 127 456 456 PHE PHE M . n C 3 128 ARG 128 457 457 ARG ARG M . n C 3 129 LYS 129 458 458 LYS LYS M . n C 3 130 SER 130 459 459 SER SER M . n C 3 131 ASN 131 460 460 ASN ASN M . n C 3 132 LEU 132 461 461 LEU LEU M . n C 3 133 LYS 133 462 462 LYS LYS M . n C 3 134 PRO 134 463 463 PRO PRO M . n C 3 135 PHE 135 464 464 PHE PHE M . n C 3 136 GLU 136 465 465 GLU GLU M . n C 3 137 ARG 137 466 466 ARG ARG M . n C 3 138 ASP 138 467 467 ASP ASP M . n C 3 139 ILE 139 468 468 ILE ILE M . n C 3 140 SER 140 469 469 SER SER M . n C 3 141 THR 141 470 470 THR THR M . n C 3 142 GLU 142 471 471 GLU GLU M . n C 3 143 ILE 143 472 472 ILE ILE M . n C 3 144 TYR 144 473 473 TYR TYR M . n C 3 145 GLN 145 474 474 GLN GLN M . n C 3 146 ALA 146 475 475 ALA ALA M . n C 3 147 GLY 147 476 476 GLY GLY M . n C 3 148 ASN 148 477 477 ASN ASN M . n C 3 149 LYS 149 478 478 LYS LYS M . n C 3 150 PRO 150 479 479 PRO PRO M . n C 3 151 CYS 151 480 480 CYS CYS M . n C 3 152 ASN 152 481 481 ASN ASN M . n C 3 153 GLY 153 482 482 GLY GLY M . n C 3 154 VAL 154 483 483 VAL VAL M . n C 3 155 ALA 155 484 484 ALA ALA M . n C 3 156 GLY 156 485 485 GLY GLY M . n C 3 157 PHE 157 486 486 PHE PHE M . n C 3 158 ASN 158 487 487 ASN ASN M . n C 3 159 CYS 159 488 488 CYS CYS M . n C 3 160 TYR 160 489 489 TYR TYR M . n C 3 161 PHE 161 490 490 PHE PHE M . n C 3 162 PRO 162 491 491 PRO PRO M . n C 3 163 LEU 163 492 492 LEU LEU M . n C 3 164 ARG 164 493 493 ARG ARG M . n C 3 165 SER 165 494 494 SER SER M . n C 3 166 TYR 166 495 495 TYR TYR M . n C 3 167 SER 167 496 496 SER SER M . n C 3 168 PHE 168 497 497 PHE PHE M . n C 3 169 ARG 169 498 498 ARG ARG M . n C 3 170 PRO 170 499 499 PRO PRO M . n C 3 171 THR 171 500 500 THR THR M . n C 3 172 TYR 172 501 501 TYR TYR M . n C 3 173 GLY 173 502 502 GLY GLY M . n C 3 174 VAL 174 503 503 VAL VAL M . n C 3 175 GLY 175 504 504 GLY GLY M . n C 3 176 HIS 176 505 505 HIS HIS M . n C 3 177 GLN 177 506 506 GLN GLN M . n C 3 178 PRO 178 507 507 PRO PRO M . n C 3 179 TYR 179 508 508 TYR TYR M . n C 3 180 ARG 180 509 509 ARG ARG M . n C 3 181 VAL 181 510 510 VAL VAL M . n C 3 182 VAL 182 511 511 VAL VAL M . n C 3 183 VAL 183 512 512 VAL VAL M . n C 3 184 LEU 184 513 513 LEU LEU M . n C 3 185 SER 185 514 514 SER SER M . n C 3 186 PHE 186 515 515 PHE PHE M . n C 3 187 GLU 187 516 516 GLU GLU M . n C 3 188 LEU 188 517 517 LEU LEU M . n C 3 189 LEU 189 518 518 LEU LEU M . n C 3 190 HIS 190 519 519 HIS HIS M . n C 3 191 ALA 191 520 520 ALA ALA M . n C 3 192 PRO 192 521 521 PRO PRO M . n C 3 193 ALA 193 522 522 ALA ALA M . n C 3 194 THR 194 523 523 THR THR M . n C 3 195 VAL 195 524 524 VAL VAL M . n C 3 196 CYS 196 525 525 CYS CYS M . n C 3 197 GLY 197 526 526 GLY GLY M . n C 3 198 PRO 198 527 527 PRO PRO M . n C 3 199 LYS 199 528 528 LYS LYS M . n C 3 200 LYS 200 529 529 LYS LYS M . n D 1 1 GLN 1 1 1 GLN GLN C . n D 1 2 VAL 2 2 2 VAL VAL C . n D 1 3 GLN 3 3 3 GLN GLN C . n D 1 4 LEU 4 4 4 LEU LEU C . n D 1 5 VAL 5 5 5 VAL VAL C . n D 1 6 GLN 6 6 6 GLN GLN C . n D 1 7 SER 7 7 7 SER SER C . n D 1 8 GLY 8 8 8 GLY GLY C . n D 1 9 ALA 9 9 9 ALA ALA C . n D 1 10 GLU 10 10 10 GLU GLU C . n D 1 11 VAL 11 11 11 VAL VAL C . n D 1 12 LYS 12 12 12 LYS LYS C . n D 1 13 LYS 13 13 13 LYS LYS C . n D 1 14 PRO 14 14 14 PRO PRO C . n D 1 15 GLY 15 15 15 GLY GLY C . n D 1 16 ALA 16 16 16 ALA ALA C . n D 1 17 SER 17 17 17 SER SER C . n D 1 18 VAL 18 18 18 VAL VAL C . n D 1 19 LYS 19 19 19 LYS LYS C . n D 1 20 VAL 20 20 20 VAL VAL C . n D 1 21 SER 21 21 21 SER SER C . n D 1 22 CYS 22 22 22 CYS CYS C . n D 1 23 LYS 23 23 23 LYS LYS C . n D 1 24 ALA 24 24 24 ALA ALA C . n D 1 25 SER 25 25 25 SER SER C . n D 1 26 GLY 26 26 26 GLY GLY C . n D 1 27 TYR 27 27 27 TYR TYR C . n D 1 28 PRO 28 28 28 PRO PRO C . n D 1 29 PHE 29 29 29 PHE PHE C . n D 1 30 THR 30 30 30 THR THR C . n D 1 31 SER 31 31 31 SER SER C . n D 1 32 TYR 32 32 32 TYR TYR C . n D 1 33 GLY 33 33 33 GLY GLY C . n D 1 34 ILE 34 34 34 ILE ILE C . n D 1 35 SER 35 35 35 SER SER C . n D 1 36 TRP 36 36 36 TRP TRP C . n D 1 37 VAL 37 37 37 VAL VAL C . n D 1 38 ARG 38 38 38 ARG ARG C . n D 1 39 GLN 39 39 39 GLN GLN C . n D 1 40 ALA 40 40 40 ALA ALA C . n D 1 41 PRO 41 41 41 PRO PRO C . n D 1 42 GLY 42 42 42 GLY GLY C . n D 1 43 GLN 43 43 43 GLN GLN C . n D 1 44 GLY 44 44 44 GLY GLY C . n D 1 45 LEU 45 45 45 LEU LEU C . n D 1 46 GLU 46 46 46 GLU GLU C . n D 1 47 TRP 47 47 47 TRP TRP C . n D 1 48 MET 48 48 48 MET MET C . n D 1 49 GLY 49 49 49 GLY GLY C . n D 1 50 TRP 50 50 50 TRP TRP C . n D 1 51 ILE 51 51 51 ILE ILE C . n D 1 52 SER 52 52 52 SER SER C . n D 1 53 THR 53 53 53 THR THR C . n D 1 54 TYR 54 54 54 TYR TYR C . n D 1 55 ASN 55 55 55 ASN ASN C . n D 1 56 GLY 56 56 56 GLY GLY C . n D 1 57 ASN 57 57 57 ASN ASN C . n D 1 58 THR 58 58 58 THR THR C . n D 1 59 ASN 59 59 59 ASN ASN C . n D 1 60 TYR 60 60 60 TYR TYR C . n D 1 61 ALA 61 61 61 ALA ALA C . n D 1 62 GLN 62 62 62 GLN GLN C . n D 1 63 LYS 63 63 63 LYS LYS C . n D 1 64 PHE 64 64 64 PHE PHE C . n D 1 65 GLN 65 65 65 GLN GLN C . n D 1 66 GLY 66 66 66 GLY GLY C . n D 1 67 ARG 67 67 67 ARG ARG C . n D 1 68 VAL 68 68 68 VAL VAL C . n D 1 69 THR 69 69 69 THR THR C . n D 1 70 MET 70 70 70 MET MET C . n D 1 71 THR 71 71 71 THR THR C . n D 1 72 THR 72 72 72 THR THR C . n D 1 73 ASP 73 73 73 ASP ASP C . n D 1 74 THR 74 74 74 THR THR C . n D 1 75 SER 75 75 75 SER SER C . n D 1 76 THR 76 76 76 THR THR C . n D 1 77 THR 77 77 77 THR THR C . n D 1 78 THR 78 78 78 THR THR C . n D 1 79 GLY 79 79 79 GLY GLY C . n D 1 80 TYR 80 80 80 TYR TYR C . n D 1 81 MET 81 81 81 MET MET C . n D 1 82 GLU 82 82 82 GLU GLU C . n D 1 83 LEU 83 83 83 LEU LEU C . n D 1 84 ARG 84 84 84 ARG ARG C . n D 1 85 ARG 85 85 85 ARG ARG C . n D 1 86 LEU 86 86 86 LEU LEU C . n D 1 87 ARG 87 87 87 ARG ARG C . n D 1 88 SER 88 88 88 SER SER C . n D 1 89 ASP 89 89 89 ASP ASP C . n D 1 90 ASP 90 90 90 ASP ASP C . n D 1 91 THR 91 91 91 THR THR C . n D 1 92 ALA 92 92 92 ALA ALA C . n D 1 93 VAL 93 93 93 VAL VAL C . n D 1 94 TYR 94 94 94 TYR TYR C . n D 1 95 TYR 95 95 95 TYR TYR C . n D 1 96 CYS 96 96 96 CYS CYS C . n D 1 97 ALA 97 97 97 ALA ALA C . n D 1 98 ARG 98 98 98 ARG ARG C . n D 1 99 ASP 99 99 99 ASP ASP C . n D 1 100 TYR 100 100 100 TYR TYR C . n D 1 101 THR 101 101 101 THR THR C . n D 1 102 ARG 102 102 102 ARG ARG C . n D 1 103 GLY 103 103 103 GLY GLY C . n D 1 104 ALA 104 104 104 ALA ALA C . n D 1 105 TRP 105 105 105 TRP TRP C . n D 1 106 PHE 106 106 106 PHE PHE C . n D 1 107 GLY 107 107 107 GLY GLY C . n D 1 108 GLU 108 108 108 GLU GLU C . n D 1 109 SER 109 109 109 SER SER C . n D 1 110 LEU 110 110 110 LEU LEU C . n D 1 111 ILE 111 111 111 ILE ILE C . n D 1 112 GLY 112 112 112 GLY GLY C . n D 1 113 GLY 113 113 113 GLY GLY C . n D 1 114 PHE 114 114 114 PHE PHE C . n D 1 115 ASP 115 115 115 ASP ASP C . n D 1 116 ASN 116 116 116 ASN ASN C . n D 1 117 TRP 117 117 117 TRP TRP C . n D 1 118 GLY 118 118 118 GLY GLY C . n D 1 119 GLN 119 119 119 GLN GLN C . n D 1 120 GLY 120 120 120 GLY GLY C . n D 1 121 THR 121 121 121 THR THR C . n D 1 122 LEU 122 122 122 LEU LEU C . n D 1 123 VAL 123 123 123 VAL VAL C . n D 1 124 THR 124 124 124 THR THR C . n D 1 125 VAL 125 125 125 VAL VAL C . n D 1 126 SER 126 126 126 SER SER C . n E 2 1 GLU 1 1 1 GLU GLU D . n E 2 2 ILE 2 2 2 ILE ILE D . n E 2 3 VAL 3 3 3 VAL VAL D . n E 2 4 LEU 4 4 4 LEU LEU D . n E 2 5 THR 5 5 5 THR THR D . n E 2 6 GLN 6 6 6 GLN GLN D . n E 2 7 SER 7 7 7 SER SER D . n E 2 8 PRO 8 8 8 PRO PRO D . n E 2 9 GLY 9 9 9 GLY GLY D . n E 2 10 THR 10 10 10 THR THR D . n E 2 11 LEU 11 11 11 LEU LEU D . n E 2 12 SER 12 12 12 SER SER D . n E 2 13 LEU 13 13 13 LEU LEU D . n E 2 14 SER 14 14 14 SER SER D . n E 2 15 PRO 15 15 15 PRO PRO D . n E 2 16 GLY 16 16 16 GLY GLY D . n E 2 17 GLU 17 17 17 GLU GLU D . n E 2 18 ARG 18 18 18 ARG ARG D . n E 2 19 ALA 19 19 19 ALA ALA D . n E 2 20 THR 20 20 20 THR THR D . n E 2 21 LEU 21 21 21 LEU LEU D . n E 2 22 SER 22 22 22 SER SER D . n E 2 23 CYS 23 23 23 CYS CYS D . n E 2 24 ARG 24 24 24 ARG ARG D . n E 2 25 ALA 25 25 25 ALA ALA D . n E 2 26 SER 26 26 26 SER SER D . n E 2 27 GLN 27 27 27 GLN GLN D . n E 2 28 THR 28 28 28 THR THR D . n E 2 29 VAL 29 29 29 VAL VAL D . n E 2 30 SER 30 30 30 SER SER D . n E 2 31 SER 31 31 31 SER SER D . n E 2 32 THR 32 32 32 THR THR D . n E 2 33 SER 33 33 33 SER SER D . n E 2 34 LEU 34 34 34 LEU LEU D . n E 2 35 ALA 35 35 35 ALA ALA D . n E 2 36 TRP 36 36 36 TRP TRP D . n E 2 37 TYR 37 37 37 TYR TYR D . n E 2 38 GLN 38 38 38 GLN GLN D . n E 2 39 GLN 39 39 39 GLN GLN D . n E 2 40 LYS 40 40 40 LYS LYS D . n E 2 41 PRO 41 41 41 PRO PRO D . n E 2 42 GLY 42 42 42 GLY GLY D . n E 2 43 GLN 43 43 43 GLN GLN D . n E 2 44 ALA 44 44 44 ALA ALA D . n E 2 45 PRO 45 45 45 PRO PRO D . n E 2 46 ARG 46 46 46 ARG ARG D . n E 2 47 LEU 47 47 47 LEU LEU D . n E 2 48 LEU 48 48 48 LEU LEU D . n E 2 49 ILE 49 49 49 ILE ILE D . n E 2 50 TYR 50 50 50 TYR TYR D . n E 2 51 GLY 51 51 51 GLY GLY D . n E 2 52 ALA 52 52 52 ALA ALA D . n E 2 53 SER 53 53 53 SER SER D . n E 2 54 SER 54 54 54 SER SER D . n E 2 55 ARG 55 55 55 ARG ARG D . n E 2 56 ALA 56 56 56 ALA ALA D . n E 2 57 THR 57 57 57 THR THR D . n E 2 58 GLY 58 58 58 GLY GLY D . n E 2 59 ILE 59 59 59 ILE ILE D . n E 2 60 PRO 60 60 60 PRO PRO D . n E 2 61 ASP 61 61 61 ASP ASP D . n E 2 62 ARG 62 62 62 ARG ARG D . n E 2 63 PHE 63 63 63 PHE PHE D . n E 2 64 SER 64 64 64 SER SER D . n E 2 65 GLY 65 65 65 GLY GLY D . n E 2 66 SER 66 66 66 SER SER D . n E 2 67 GLY 67 67 67 GLY GLY D . n E 2 68 SER 68 68 68 SER SER D . n E 2 69 GLY 69 69 69 GLY GLY D . n E 2 70 THR 70 70 70 THR THR D . n E 2 71 ASP 71 71 71 ASP ASP D . n E 2 72 PHE 72 72 72 PHE PHE D . n E 2 73 THR 73 73 73 THR THR D . n E 2 74 LEU 74 74 74 LEU LEU D . n E 2 75 THR 75 75 75 THR THR D . n E 2 76 ILE 76 76 76 ILE ILE D . n E 2 77 SER 77 77 77 SER SER D . n E 2 78 ARG 78 78 78 ARG ARG D . n E 2 79 LEU 79 79 79 LEU LEU D . n E 2 80 GLU 80 80 80 GLU GLU D . n E 2 81 PRO 81 81 81 PRO PRO D . n E 2 82 GLU 82 82 82 GLU GLU D . n E 2 83 ASP 83 83 83 ASP ASP D . n E 2 84 PHE 84 84 84 PHE PHE D . n E 2 85 ALA 85 85 85 ALA ALA D . n E 2 86 VAL 86 86 86 VAL VAL D . n E 2 87 TYR 87 87 87 TYR TYR D . n E 2 88 TYR 88 88 88 TYR TYR D . n E 2 89 CYS 89 89 89 CYS CYS D . n E 2 90 GLN 90 90 90 GLN GLN D . n E 2 91 GLN 91 91 91 GLN GLN D . n E 2 92 HIS 92 92 92 HIS HIS D . n E 2 93 ASP 93 93 93 ASP ASP D . n E 2 94 THR 94 94 94 THR THR D . n E 2 95 SER 95 95 95 SER SER D . n E 2 96 LEU 96 96 96 LEU LEU D . n E 2 97 THR 97 97 97 THR THR D . n E 2 98 PHE 98 98 98 PHE PHE D . n E 2 99 GLY 99 99 99 GLY GLY D . n E 2 100 GLY 100 100 100 GLY GLY D . n E 2 101 GLY 101 101 101 GLY GLY D . n E 2 102 THR 102 102 102 THR THR D . n E 2 103 LYS 103 103 103 LYS LYS D . n E 2 104 VAL 104 104 104 VAL VAL D . n E 2 105 GLU 105 105 105 GLU GLU D . n E 2 106 ILE 106 106 106 ILE ILE D . n E 2 107 LYS 107 107 107 LYS LYS D . n E 2 108 ARG 108 108 108 ARG ARG D . n F 3 1 PRO 1 330 ? ? ? E . n F 3 2 ASN 2 331 ? ? ? E . n F 3 3 ILE 3 332 332 ILE ILE E . n F 3 4 THR 4 333 333 THR THR E . n F 3 5 ASN 5 334 334 ASN ASN E . n F 3 6 LEU 6 335 335 LEU LEU E . n F 3 7 CYS 7 336 336 CYS CYS E . n F 3 8 PRO 8 337 337 PRO PRO E . n F 3 9 PHE 9 338 338 PHE PHE E . n F 3 10 ASP 10 339 339 ASP ASP E . n F 3 11 GLU 11 340 340 GLU GLU E . n F 3 12 VAL 12 341 341 VAL VAL E . n F 3 13 PHE 13 342 342 PHE PHE E . n F 3 14 ASN 14 343 343 ASN ASN E . n F 3 15 ALA 15 344 344 ALA ALA E . n F 3 16 THR 16 345 345 THR THR E . n F 3 17 ARG 17 346 346 ARG ARG E . n F 3 18 PHE 18 347 347 PHE PHE E . n F 3 19 ALA 19 348 348 ALA ALA E . n F 3 20 SER 20 349 349 SER SER E . n F 3 21 VAL 21 350 350 VAL VAL E . n F 3 22 TYR 22 351 351 TYR TYR E . n F 3 23 ALA 23 352 352 ALA ALA E . n F 3 24 TRP 24 353 353 TRP TRP E . n F 3 25 ASN 25 354 354 ASN ASN E . n F 3 26 ARG 26 355 355 ARG ARG E . n F 3 27 LYS 27 356 356 LYS LYS E . n F 3 28 ARG 28 357 357 ARG ARG E . n F 3 29 ILE 29 358 358 ILE ILE E . n F 3 30 SER 30 359 359 SER SER E . n F 3 31 ASN 31 360 360 ASN ASN E . n F 3 32 CYS 32 361 361 CYS CYS E . n F 3 33 VAL 33 362 362 VAL VAL E . n F 3 34 ALA 34 363 363 ALA ALA E . n F 3 35 ASP 35 364 364 ASP ASP E . n F 3 36 TYR 36 365 365 TYR TYR E . n F 3 37 SER 37 366 366 SER SER E . n F 3 38 VAL 38 367 367 VAL VAL E . n F 3 39 LEU 39 368 368 LEU LEU E . n F 3 40 TYR 40 369 369 TYR TYR E . n F 3 41 ASN 41 370 370 ASN ASN E . n F 3 42 LEU 42 371 371 LEU LEU E . n F 3 43 ALA 43 372 372 ALA ALA E . n F 3 44 PRO 44 373 373 PRO PRO E . n F 3 45 PHE 45 374 374 PHE PHE E . n F 3 46 PHE 46 375 375 PHE PHE E . n F 3 47 THR 47 376 376 THR THR E . n F 3 48 PHE 48 377 377 PHE PHE E . n F 3 49 LYS 49 378 378 LYS LYS E . n F 3 50 CYS 50 379 379 CYS CYS E . n F 3 51 TYR 51 380 380 TYR TYR E . n F 3 52 GLY 52 381 381 GLY GLY E . n F 3 53 VAL 53 382 382 VAL VAL E . n F 3 54 SER 54 383 383 SER SER E . n F 3 55 PRO 55 384 384 PRO PRO E . n F 3 56 THR 56 385 385 THR THR E . n F 3 57 LYS 57 386 386 LYS LYS E . n F 3 58 LEU 58 387 387 LEU LEU E . n F 3 59 ASN 59 388 388 ASN ASN E . n F 3 60 ASP 60 389 389 ASP ASP E . n F 3 61 LEU 61 390 390 LEU LEU E . n F 3 62 CYS 62 391 391 CYS CYS E . n F 3 63 PHE 63 392 392 PHE PHE E . n F 3 64 THR 64 393 393 THR THR E . n F 3 65 ASN 65 394 394 ASN ASN E . n F 3 66 VAL 66 395 395 VAL VAL E . n F 3 67 TYR 67 396 396 TYR TYR E . n F 3 68 ALA 68 397 397 ALA ALA E . n F 3 69 ASP 69 398 398 ASP ASP E . n F 3 70 SER 70 399 399 SER SER E . n F 3 71 PHE 71 400 400 PHE PHE E . n F 3 72 VAL 72 401 401 VAL VAL E . n F 3 73 ILE 73 402 402 ILE ILE E . n F 3 74 ARG 74 403 403 ARG ARG E . n F 3 75 GLY 75 404 404 GLY GLY E . n F 3 76 ASP 76 405 405 ASP ASP E . n F 3 77 GLU 77 406 406 GLU GLU E . n F 3 78 VAL 78 407 407 VAL VAL E . n F 3 79 ARG 79 408 408 ARG ARG E . n F 3 80 GLN 80 409 409 GLN GLN E . n F 3 81 ILE 81 410 410 ILE ILE E . n F 3 82 ALA 82 411 411 ALA ALA E . n F 3 83 PRO 83 412 412 PRO PRO E . n F 3 84 GLY 84 413 413 GLY GLY E . n F 3 85 GLN 85 414 414 GLN GLN E . n F 3 86 THR 86 415 415 THR THR E . n F 3 87 GLY 87 416 416 GLY GLY E . n F 3 88 ASN 88 417 417 ASN ASN E . n F 3 89 ILE 89 418 418 ILE ILE E . n F 3 90 ALA 90 419 419 ALA ALA E . n F 3 91 ASP 91 420 420 ASP ASP E . n F 3 92 TYR 92 421 421 TYR TYR E . n F 3 93 ASN 93 422 422 ASN ASN E . n F 3 94 TYR 94 423 423 TYR TYR E . n F 3 95 LYS 95 424 424 LYS LYS E . n F 3 96 LEU 96 425 425 LEU LEU E . n F 3 97 PRO 97 426 426 PRO PRO E . n F 3 98 ASP 98 427 427 ASP ASP E . n F 3 99 ASP 99 428 428 ASP ASP E . n F 3 100 PHE 100 429 429 PHE PHE E . n F 3 101 THR 101 430 430 THR THR E . n F 3 102 GLY 102 431 431 GLY GLY E . n F 3 103 CYS 103 432 432 CYS CYS E . n F 3 104 VAL 104 433 433 VAL VAL E . n F 3 105 ILE 105 434 434 ILE ILE E . n F 3 106 ALA 106 435 435 ALA ALA E . n F 3 107 TRP 107 436 436 TRP TRP E . n F 3 108 ASN 108 437 437 ASN ASN E . n F 3 109 SER 109 438 438 SER SER E . n F 3 110 ASN 110 439 439 ASN ASN E . n F 3 111 LYS 111 440 440 LYS LYS E . n F 3 112 LEU 112 441 441 LEU LEU E . n F 3 113 ASP 113 442 442 ASP ASP E . n F 3 114 SER 114 443 443 SER SER E . n F 3 115 LYS 115 444 444 LYS LYS E . n F 3 116 VAL 116 445 445 VAL VAL E . n F 3 117 SER 117 446 446 SER SER E . n F 3 118 GLY 118 447 447 GLY GLY E . n F 3 119 ASN 119 448 448 ASN ASN E . n F 3 120 TYR 120 449 449 TYR TYR E . n F 3 121 ASN 121 450 450 ASN ASN E . n F 3 122 TYR 122 451 451 TYR TYR E . n F 3 123 LEU 123 452 452 LEU LEU E . n F 3 124 TYR 124 453 453 TYR TYR E . n F 3 125 ARG 125 454 454 ARG ARG E . n F 3 126 LEU 126 455 455 LEU LEU E . n F 3 127 PHE 127 456 456 PHE PHE E . n F 3 128 ARG 128 457 457 ARG ARG E . n F 3 129 LYS 129 458 458 LYS LYS E . n F 3 130 SER 130 459 459 SER SER E . n F 3 131 ASN 131 460 460 ASN ASN E . n F 3 132 LEU 132 461 461 LEU LEU E . n F 3 133 LYS 133 462 462 LYS LYS E . n F 3 134 PRO 134 463 463 PRO PRO E . n F 3 135 PHE 135 464 464 PHE PHE E . n F 3 136 GLU 136 465 465 GLU GLU E . n F 3 137 ARG 137 466 466 ARG ARG E . n F 3 138 ASP 138 467 467 ASP ASP E . n F 3 139 ILE 139 468 468 ILE ILE E . n F 3 140 SER 140 469 469 SER SER E . n F 3 141 THR 141 470 470 THR THR E . n F 3 142 GLU 142 471 471 GLU GLU E . n F 3 143 ILE 143 472 472 ILE ILE E . n F 3 144 TYR 144 473 473 TYR TYR E . n F 3 145 GLN 145 474 474 GLN GLN E . n F 3 146 ALA 146 475 475 ALA ALA E . n F 3 147 GLY 147 476 476 GLY GLY E . n F 3 148 ASN 148 477 477 ASN ASN E . n F 3 149 LYS 149 478 478 LYS LYS E . n F 3 150 PRO 150 479 479 PRO PRO E . n F 3 151 CYS 151 480 480 CYS CYS E . n F 3 152 ASN 152 481 481 ASN ASN E . n F 3 153 GLY 153 482 482 GLY GLY E . n F 3 154 VAL 154 483 483 VAL VAL E . n F 3 155 ALA 155 484 484 ALA ALA E . n F 3 156 GLY 156 485 485 GLY GLY E . n F 3 157 PHE 157 486 486 PHE PHE E . n F 3 158 ASN 158 487 487 ASN ASN E . n F 3 159 CYS 159 488 488 CYS CYS E . n F 3 160 TYR 160 489 489 TYR TYR E . n F 3 161 PHE 161 490 490 PHE PHE E . n F 3 162 PRO 162 491 491 PRO PRO E . n F 3 163 LEU 163 492 492 LEU LEU E . n F 3 164 ARG 164 493 493 ARG ARG E . n F 3 165 SER 165 494 494 SER SER E . n F 3 166 TYR 166 495 495 TYR TYR E . n F 3 167 SER 167 496 496 SER SER E . n F 3 168 PHE 168 497 497 PHE PHE E . n F 3 169 ARG 169 498 498 ARG ARG E . n F 3 170 PRO 170 499 499 PRO PRO E . n F 3 171 THR 171 500 500 THR THR E . n F 3 172 TYR 172 501 501 TYR TYR E . n F 3 173 GLY 173 502 502 GLY GLY E . n F 3 174 VAL 174 503 503 VAL VAL E . n F 3 175 GLY 175 504 504 GLY GLY E . n F 3 176 HIS 176 505 505 HIS HIS E . n F 3 177 GLN 177 506 506 GLN GLN E . n F 3 178 PRO 178 507 507 PRO PRO E . n F 3 179 TYR 179 508 508 TYR TYR E . n F 3 180 ARG 180 509 509 ARG ARG E . n F 3 181 VAL 181 510 510 VAL VAL E . n F 3 182 VAL 182 511 511 VAL VAL E . n F 3 183 VAL 183 512 512 VAL VAL E . n F 3 184 LEU 184 513 513 LEU LEU E . n F 3 185 SER 185 514 514 SER SER E . n F 3 186 PHE 186 515 515 PHE PHE E . n F 3 187 GLU 187 516 516 GLU GLU E . n F 3 188 LEU 188 517 ? ? ? E . n F 3 189 LEU 189 518 ? ? ? E . n F 3 190 HIS 190 519 ? ? ? E . n F 3 191 ALA 191 520 ? ? ? E . n F 3 192 PRO 192 521 ? ? ? E . n F 3 193 ALA 193 522 ? ? ? E . n F 3 194 THR 194 523 ? ? ? E . n F 3 195 VAL 195 524 ? ? ? E . n F 3 196 CYS 196 525 ? ? ? E . n F 3 197 GLY 197 526 ? ? ? E . n F 3 198 PRO 198 527 ? ? ? E . n F 3 199 LYS 199 528 ? ? ? E . n F 3 200 LYS 200 529 ? ? ? E . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email gaof@im.ac.cn _pdbx_contact_author.name_first George _pdbx_contact_author.name_last Gao _pdbx_contact_author.name_mi F _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-3869-615X # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-08-31 2 'Structure model' 1 1 2022-09-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.page_first' 2 2 'Structure model' '_citation.page_last' 3 2 'Structure model' '_citation.pdbx_database_id_PubMed' 4 2 'Structure model' '_citation.title' 5 2 'Structure model' '_citation_author.name' # _pdbx_entry_details.entry_id 7YAD _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _em_3d_fitting.entry_id 7YAD _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol ? _em_3d_fitting.ref_space ? _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 7YAD _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 374776 _em_3d_reconstruction.resolution 2.66 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 8.0 _em_buffer.specimen_id 1 _em_buffer.name ? # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.details _em_entity_assembly.name _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.entity_id_list _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details 1 0 ? 'Cryo-EM structure of the Omicron RBD-RBD-S309 complex from the S309-bound Omicron spike protein (local refinement)' 'MULTIPLE SOURCES' COMPLEX 1,2,3 ? ? 2 1 ? 'S309 antibody Fab' RECOMBINANT COMPLEX 1,2 ? ? 3 1 ? 'SARS-CoV-2 Omicron RBD' RECOMBINANT COMPLEX 3 ? ? # _em_imaging.id 1 _em_imaging.entry_id 7YAD _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen ? _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max 5000 _em_imaging.nominal_defocus_min 1200 _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature ? _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity ? _em_vitrification.instrument ? _em_vitrification.entry_id 7YAD _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 7YAD _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OD1 E ASP 442 ? ? OH E TYR 451 ? ? 2.16 2 1 OH M TYR 369 ? ? O M PRO 384 ? ? 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA B 52 ? ? 72.40 -8.52 2 1 SER B 53 ? ? -130.90 -36.94 3 1 SER B 95 ? ? 60.02 -140.62 4 1 ASN M 343 ? ? -97.32 32.12 5 1 ASN M 360 ? ? 60.08 60.60 6 1 THR M 430 ? ? 37.68 58.74 7 1 LEU M 518 ? ? -169.35 -88.82 8 1 ALA D 52 ? ? 71.57 -8.09 9 1 SER D 53 ? ? -130.53 -39.18 10 1 SER D 95 ? ? 57.01 -136.10 11 1 THR E 333 ? ? 65.79 164.75 12 1 ALA E 372 ? ? 47.08 75.08 13 1 PRO E 373 ? ? -70.83 49.52 14 1 THR E 385 ? ? -93.95 44.60 15 1 ASN E 388 ? ? -82.68 47.01 16 1 THR E 393 ? ? -94.42 -61.48 17 1 THR E 430 ? ? 36.94 56.85 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A VAL 125 ? A VAL 125 2 1 Y 1 A SER 126 ? A SER 126 3 1 Y 1 B ILE 106 ? B ILE 106 4 1 Y 1 B LYS 107 ? B LYS 107 5 1 Y 1 B ARG 108 ? B ARG 108 6 1 Y 1 E PRO 330 ? F PRO 1 7 1 Y 1 E ASN 331 ? F ASN 2 8 1 Y 1 E LEU 517 ? F LEU 188 9 1 Y 1 E LEU 518 ? F LEU 189 10 1 Y 1 E HIS 519 ? F HIS 190 11 1 Y 1 E ALA 520 ? F ALA 191 12 1 Y 1 E PRO 521 ? F PRO 192 13 1 Y 1 E ALA 522 ? F ALA 193 14 1 Y 1 E THR 523 ? F THR 194 15 1 Y 1 E VAL 524 ? F VAL 195 16 1 Y 1 E CYS 525 ? F CYS 196 17 1 Y 1 E GLY 526 ? F GLY 197 18 1 Y 1 E PRO 527 ? F PRO 198 19 1 Y 1 E LYS 528 ? F LYS 199 20 1 Y 1 E LYS 529 ? F LYS 200 # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type NONE _em_ctf_correction.details ? # loop_ _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue 2 1 ? ? 9606 ? ? 'Homo sapiens' ? ? 3 3 ? ? 2697049 ? ? 'Severe acute respiratory syndrome coronavirus 2' ? ? # loop_ _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain 2 1 ? 9606 'Homo sapiens' ? ? 3 2 ? 9606 'Homo sapiens' ? ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 50 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? _em_image_recording.avg_electron_dose_per_subtomogram ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' ? ? ? 1 ? ? 2 'IMAGE ACQUISITION' ? ? ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? ? ? 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? ? ? ? ? ? 8 'MODEL REFINEMENT' ? ? ? ? ? ? 9 OTHER ? ? ? ? ? ? 10 'INITIAL EULER ASSIGNMENT' ? ? ? 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? ? ? 1 ? ? 12 CLASSIFICATION ? ? ? 1 ? ? 13 RECONSTRUCTION ? ? ? 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 81922044 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero G 4 NAG 1 F NAG 1 M NAG 591 n G 4 NAG 2 F NAG 2 M NAG 592 n G 4 FUC 3 F FUC 3 M FUC 593 n H 4 NAG 1 G NAG 1 E NAG 591 n H 4 NAG 2 G NAG 2 E NAG 592 n H 4 FUC 3 G FUC 3 E FUC 593 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 4 'DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-ROH' 'Glycam Condensed Sequence' GMML 1.0 2 4 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-1-2/a4-b1_a6-c1' WURCS PDB2Glycan 1.1.0 3 4 '[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}[(6+1)][a-L-Fucp]{}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 4 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 4 3 FUC C1 O1 1 NAG O6 HO6 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 4 NAG 1 n 4 NAG 2 n 4 FUC 3 n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 FUC ? ? FUC ? ? 'SUBJECT OF INVESTIGATION' ? 2 NAG ? ? NAG ? ? 'SUBJECT OF INVESTIGATION' ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details ? #