data_7YGY # _entry.id 7YGY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7YGY pdb_00007ygy 10.2210/pdb7ygy/pdb WWPDB D_1300030870 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7YGY _pdbx_database_status.recvd_initial_deposition_date 2022-07-12 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Mun, S.A.' 1 ? 'Park, J.' 2 ? 'Kang, J.Y.' 3 ? 'Park, T.' 4 ? 'Jin, M.' 5 ? 'Yang, J.' 6 ? 'Eom, S.H.' 7 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Iucrj _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2052-2525 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 10 _citation.language ? _citation.page_first 233 _citation.page_last 245 _citation.title 'Structural and biochemical insights into Zn 2+ -bound EF-hand proteins, EFhd1 and EFhd2.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1107/S2052252523001501 _citation.pdbx_database_id_PubMed 36862489 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mun, S.A.' 1 0000-0002-2614-2221 primary 'Park, J.' 2 0000-0003-2564-5422 primary 'Kang, J.Y.' 3 ? primary 'Park, T.' 4 0000-0002-7779-9282 primary 'Jin, M.' 5 0000-0003-0076-4345 primary 'Yang, J.' 6 ? primary 'Eom, S.H.' 7 0000-0002-1272-5805 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7YGY _cell.details ? _cell.formula_units_Z ? _cell.length_a 92.900 _cell.length_a_esd ? _cell.length_b 92.900 _cell.length_b_esd ? _cell.length_c 92.900 _cell.length_c_esd ? _cell.volume 801759.911 _cell.volume_esd ? _cell.Z_PDB 24 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 7YGY _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall 'I 2 2 3' _symmetry.space_group_name_H-M 'I 2 3' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'EF-hand domain-containing protein D2' 13709.742 1 ? ? 'UNP RESIDUES 70-184' ;[GAMGS + EFhd2(70-184)] - GAMGS: the cleaved site after GST-TEV tag cleavage - GEPQSPSRRVFN: Part of PR domain in EFhd2, disordered - DVSS: disordered ; 2 non-polymer syn 'ZINC ION' 65.409 3 ? ? ? ? 3 water nat water 18.015 5 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name Swiprosin-1 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GAMGSGEPQSPSRRVFNPYTEFKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDF DSKLSFREFLLIFRKAAAGELQEDSGLCVLARLSEIDVSS ; _entity_poly.pdbx_seq_one_letter_code_can ;GAMGSGEPQSPSRRVFNPYTEFKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDF DSKLSFREFLLIFRKAAAGELQEDSGLCVLARLSEIDVSS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 GLY n 1 5 SER n 1 6 GLY n 1 7 GLU n 1 8 PRO n 1 9 GLN n 1 10 SER n 1 11 PRO n 1 12 SER n 1 13 ARG n 1 14 ARG n 1 15 VAL n 1 16 PHE n 1 17 ASN n 1 18 PRO n 1 19 TYR n 1 20 THR n 1 21 GLU n 1 22 PHE n 1 23 LYS n 1 24 GLU n 1 25 PHE n 1 26 SER n 1 27 ARG n 1 28 LYS n 1 29 GLN n 1 30 ILE n 1 31 LYS n 1 32 ASP n 1 33 MET n 1 34 GLU n 1 35 LYS n 1 36 MET n 1 37 PHE n 1 38 LYS n 1 39 GLN n 1 40 TYR n 1 41 ASP n 1 42 ALA n 1 43 GLY n 1 44 ARG n 1 45 ASP n 1 46 GLY n 1 47 PHE n 1 48 ILE n 1 49 ASP n 1 50 LEU n 1 51 MET n 1 52 GLU n 1 53 LEU n 1 54 LYS n 1 55 LEU n 1 56 MET n 1 57 MET n 1 58 GLU n 1 59 LYS n 1 60 LEU n 1 61 GLY n 1 62 ALA n 1 63 PRO n 1 64 GLN n 1 65 THR n 1 66 HIS n 1 67 LEU n 1 68 GLY n 1 69 LEU n 1 70 LYS n 1 71 ASN n 1 72 MET n 1 73 ILE n 1 74 LYS n 1 75 GLU n 1 76 VAL n 1 77 ASP n 1 78 GLU n 1 79 ASP n 1 80 PHE n 1 81 ASP n 1 82 SER n 1 83 LYS n 1 84 LEU n 1 85 SER n 1 86 PHE n 1 87 ARG n 1 88 GLU n 1 89 PHE n 1 90 LEU n 1 91 LEU n 1 92 ILE n 1 93 PHE n 1 94 ARG n 1 95 LYS n 1 96 ALA n 1 97 ALA n 1 98 ALA n 1 99 GLY n 1 100 GLU n 1 101 LEU n 1 102 GLN n 1 103 GLU n 1 104 ASP n 1 105 SER n 1 106 GLY n 1 107 LEU n 1 108 CYS n 1 109 VAL n 1 110 LEU n 1 111 ALA n 1 112 ARG n 1 113 LEU n 1 114 SER n 1 115 GLU n 1 116 ILE n 1 117 ASP n 1 118 VAL n 1 119 SER n 1 120 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 120 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'EFHD2, SWS1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code EFHD2_HUMAN _struct_ref.pdbx_db_accession Q96C19 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GEPQSPSRRVFNPYTEFKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSKLS FREFLLIFRKAAAGELQEDSGLCVLARLSEIDVSS ; _struct_ref.pdbx_align_begin 70 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7YGY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 120 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q96C19 _struct_ref_seq.db_align_beg 70 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 184 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 70 _struct_ref_seq.pdbx_auth_seq_align_end 184 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7YGY GLY A 1 ? UNP Q96C19 ? ? 'expression tag' 65 1 1 7YGY ALA A 2 ? UNP Q96C19 ? ? 'expression tag' 66 2 1 7YGY MET A 3 ? UNP Q96C19 ? ? 'expression tag' 67 3 1 7YGY GLY A 4 ? UNP Q96C19 ? ? 'expression tag' 68 4 1 7YGY SER A 5 ? UNP Q96C19 ? ? 'expression tag' 69 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7YGY _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.47 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 50.2 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M HEPES-NaOH pH 7.5, 25% (w/v) PEG 8000' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-03-06 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.2851 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PAL/PLS BEAMLINE 5C (4A)' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.2851 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline '5C (4A)' _diffrn_source.pdbx_synchrotron_site PAL/PLS # _reflns.B_iso_Wilson_estimate 71.70 _reflns.entry_id 7YGY _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.60 _reflns.d_resolution_low 65.67 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 4243 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 80.8 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 40.3 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.00 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.60 _reflns_shell.d_res_low 2.72 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 518 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.960 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 67.33 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7YGY _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.60 _refine.ls_d_res_low 46.45 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 4235 _refine.ls_number_reflns_R_free 209 _refine.ls_number_reflns_R_work 4026 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.83 _refine.ls_percent_reflns_R_free 4.94 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2304 _refine.ls_R_factor_R_free 0.2595 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2288 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.39 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5I2L _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 27.6291 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2248 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.60 _refine_hist.d_res_low 46.45 _refine_hist.number_atoms_solvent 5 _refine_hist.number_atoms_total 783 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 775 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0104 ? 787 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.1842 ? 1053 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0580 ? 115 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0086 ? 137 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 18.7644 ? 294 ? f_dihedral_angle_d ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.60 _refine_ls_shell.d_res_low 46.45 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 209 _refine_ls_shell.number_reflns_R_work 4026 _refine_ls_shell.percent_reflns_obs 99.83 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.2288 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.R_factor_R_free 0.2595 # _struct.entry_id 7YGY _struct.title 'Crystal structure of the Zn2+-bound EFhd2/Swiprosin-1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7YGY _struct_keywords.text 'metal binding protein, EF-hand containing protein, cytosol' _struct_keywords.pdbx_keywords 'METAL BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 26 ? ASP A 41 ? SER A 90 ASP A 105 1 ? 16 HELX_P HELX_P2 AA2 ASP A 49 ? LEU A 60 ? ASP A 113 LEU A 124 1 ? 12 HELX_P HELX_P3 AA3 THR A 65 ? ASP A 77 ? THR A 129 ASP A 141 1 ? 13 HELX_P HELX_P4 AA4 PHE A 86 ? ALA A 98 ? PHE A 150 ALA A 162 1 ? 13 HELX_P HELX_P5 AA5 SER A 105 ? SER A 114 ? SER A 169 SER A 178 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 41 OD1 ? ? ? 1_555 D ZN . ZN ? ? A ASP 105 A ZN 203 1_555 ? ? ? ? ? ? ? 2.238 ? ? metalc2 metalc ? ? A ASP 45 OD1 ? ? ? 1_555 D ZN . ZN ? ? A ASP 109 A ZN 203 1_555 ? ? ? ? ? ? ? 2.420 ? ? metalc3 metalc ? ? A PHE 47 O ? ? ? 1_555 D ZN . ZN ? ? A PHE 111 A ZN 203 1_555 ? ? ? ? ? ? ? 2.113 ? ? metalc4 metalc ? ? A GLU 52 OE1 ? ? ? 1_555 D ZN . ZN ? ? A GLU 116 A ZN 203 1_555 ? ? ? ? ? ? ? 1.966 ? ? metalc5 metalc ? ? A HIS 66 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 130 A ZN 202 1_555 ? ? ? ? ? ? ? 2.311 ? ? metalc6 metalc ? ? A LYS 70 NZ ? ? ? 1_555 C ZN . ZN ? ? A LYS 134 A ZN 202 1_555 ? ? ? ? ? ? ? 2.497 ? ? metalc7 metalc ? ? A ASP 77 OD1 ? ? ? 1_555 B ZN . ZN ? ? A ASP 141 A ZN 201 1_555 ? ? ? ? ? ? ? 2.318 ? ? metalc8 metalc ? ? A ASP 79 OD1 ? ? ? 1_555 B ZN . ZN ? ? A ASP 143 A ZN 201 1_555 ? ? ? ? ? ? ? 2.393 ? ? metalc9 metalc ? ? A ASP 81 OD1 ? ? ? 1_555 B ZN . ZN ? ? A ASP 145 A ZN 201 1_555 ? ? ? ? ? ? ? 2.127 ? ? metalc10 metalc ? ? A LYS 83 O ? ? ? 1_555 B ZN . ZN ? ? A LYS 147 A ZN 201 1_555 ? ? ? ? ? ? ? 2.541 ? ? metalc11 metalc ? ? A GLU 88 OE1 ? ? ? 1_555 B ZN . ZN ? ? A GLU 152 A ZN 201 1_555 ? ? ? ? ? ? ? 2.541 ? ? metalc12 metalc ? ? A GLU 88 OE2 ? ? ? 1_555 B ZN . ZN ? ? A GLU 152 A ZN 201 1_555 ? ? ? ? ? ? ? 2.467 ? ? metalc13 metalc ? ? A GLU 103 OE1 ? ? ? 1_555 C ZN . ZN ? ? A GLU 167 A ZN 202 21_445 ? ? ? ? ? ? ? 2.368 ? ? metalc14 metalc ? ? A GLU 103 OE2 ? ? ? 1_555 C ZN . ZN ? ? A GLU 167 A ZN 202 21_445 ? ? ? ? ? ? ? 2.606 ? ? metalc15 metalc ? ? A GLU 115 OE2 ? ? ? 1_555 C ZN . ZN ? ? A GLU 179 A ZN 202 24_455 ? ? ? ? ? ? ? 2.416 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE A 47 ? ILE A 48 ? PHE A 111 ILE A 112 AA1 2 LEU A 84 ? SER A 85 ? LEU A 148 SER A 149 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id ILE _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 48 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 112 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id LEU _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 84 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id LEU _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 148 # _atom_sites.entry_id 7YGY _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.010764 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010764 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010764 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? ZN ? ? 24.64596 5.25405 ? ? 2.14387 29.76375 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 65 ? ? ? A . n A 1 2 ALA 2 66 ? ? ? A . n A 1 3 MET 3 67 ? ? ? A . n A 1 4 GLY 4 68 ? ? ? A . n A 1 5 SER 5 69 ? ? ? A . n A 1 6 GLY 6 70 ? ? ? A . n A 1 7 GLU 7 71 ? ? ? A . n A 1 8 PRO 8 72 ? ? ? A . n A 1 9 GLN 9 73 ? ? ? A . n A 1 10 SER 10 74 ? ? ? A . n A 1 11 PRO 11 75 ? ? ? A . n A 1 12 SER 12 76 ? ? ? A . n A 1 13 ARG 13 77 ? ? ? A . n A 1 14 ARG 14 78 ? ? ? A . n A 1 15 VAL 15 79 ? ? ? A . n A 1 16 PHE 16 80 ? ? ? A . n A 1 17 ASN 17 81 ? ? ? A . n A 1 18 PRO 18 82 82 PRO PRO A . n A 1 19 TYR 19 83 83 TYR TYR A . n A 1 20 THR 20 84 84 THR THR A . n A 1 21 GLU 21 85 85 GLU GLU A . n A 1 22 PHE 22 86 86 PHE PHE A . n A 1 23 LYS 23 87 87 LYS LYS A . n A 1 24 GLU 24 88 88 GLU GLU A . n A 1 25 PHE 25 89 89 PHE PHE A . n A 1 26 SER 26 90 90 SER SER A . n A 1 27 ARG 27 91 91 ARG ARG A . n A 1 28 LYS 28 92 92 LYS LYS A . n A 1 29 GLN 29 93 93 GLN GLN A . n A 1 30 ILE 30 94 94 ILE ILE A . n A 1 31 LYS 31 95 95 LYS LYS A . n A 1 32 ASP 32 96 96 ASP ASP A . n A 1 33 MET 33 97 97 MET MET A . n A 1 34 GLU 34 98 98 GLU GLU A . n A 1 35 LYS 35 99 99 LYS LYS A . n A 1 36 MET 36 100 100 MET MET A . n A 1 37 PHE 37 101 101 PHE PHE A . n A 1 38 LYS 38 102 102 LYS LYS A . n A 1 39 GLN 39 103 103 GLN GLN A . n A 1 40 TYR 40 104 104 TYR TYR A . n A 1 41 ASP 41 105 105 ASP ASP A . n A 1 42 ALA 42 106 106 ALA ALA A . n A 1 43 GLY 43 107 107 GLY GLY A . n A 1 44 ARG 44 108 108 ARG ARG A . n A 1 45 ASP 45 109 109 ASP ASP A . n A 1 46 GLY 46 110 110 GLY GLY A . n A 1 47 PHE 47 111 111 PHE PHE A . n A 1 48 ILE 48 112 112 ILE ILE A . n A 1 49 ASP 49 113 113 ASP ASP A . n A 1 50 LEU 50 114 114 LEU LEU A . n A 1 51 MET 51 115 115 MET MET A . n A 1 52 GLU 52 116 116 GLU GLU A . n A 1 53 LEU 53 117 117 LEU LEU A . n A 1 54 LYS 54 118 118 LYS LYS A . n A 1 55 LEU 55 119 119 LEU LEU A . n A 1 56 MET 56 120 120 MET MET A . n A 1 57 MET 57 121 121 MET MET A . n A 1 58 GLU 58 122 122 GLU GLU A . n A 1 59 LYS 59 123 123 LYS LYS A . n A 1 60 LEU 60 124 124 LEU LEU A . n A 1 61 GLY 61 125 125 GLY GLY A . n A 1 62 ALA 62 126 126 ALA ALA A . n A 1 63 PRO 63 127 127 PRO PRO A . n A 1 64 GLN 64 128 128 GLN GLN A . n A 1 65 THR 65 129 129 THR THR A . n A 1 66 HIS 66 130 130 HIS HIS A . n A 1 67 LEU 67 131 131 LEU LEU A . n A 1 68 GLY 68 132 132 GLY GLY A . n A 1 69 LEU 69 133 133 LEU LEU A . n A 1 70 LYS 70 134 134 LYS LYS A . n A 1 71 ASN 71 135 135 ASN ASN A . n A 1 72 MET 72 136 136 MET MET A . n A 1 73 ILE 73 137 137 ILE ILE A . n A 1 74 LYS 74 138 138 LYS LYS A . n A 1 75 GLU 75 139 139 GLU GLU A . n A 1 76 VAL 76 140 140 VAL VAL A . n A 1 77 ASP 77 141 141 ASP ASP A . n A 1 78 GLU 78 142 142 GLU GLU A . n A 1 79 ASP 79 143 143 ASP ASP A . n A 1 80 PHE 80 144 144 PHE PHE A . n A 1 81 ASP 81 145 145 ASP ASP A . n A 1 82 SER 82 146 146 SER SER A . n A 1 83 LYS 83 147 147 LYS LYS A . n A 1 84 LEU 84 148 148 LEU LEU A . n A 1 85 SER 85 149 149 SER SER A . n A 1 86 PHE 86 150 150 PHE PHE A . n A 1 87 ARG 87 151 151 ARG ARG A . n A 1 88 GLU 88 152 152 GLU GLU A . n A 1 89 PHE 89 153 153 PHE PHE A . n A 1 90 LEU 90 154 154 LEU LEU A . n A 1 91 LEU 91 155 155 LEU LEU A . n A 1 92 ILE 92 156 156 ILE ILE A . n A 1 93 PHE 93 157 157 PHE PHE A . n A 1 94 ARG 94 158 158 ARG ARG A . n A 1 95 LYS 95 159 159 LYS LYS A . n A 1 96 ALA 96 160 160 ALA ALA A . n A 1 97 ALA 97 161 161 ALA ALA A . n A 1 98 ALA 98 162 162 ALA ALA A . n A 1 99 GLY 99 163 163 GLY GLY A . n A 1 100 GLU 100 164 164 GLU GLU A . n A 1 101 LEU 101 165 165 LEU LEU A . n A 1 102 GLN 102 166 166 GLN GLN A . n A 1 103 GLU 103 167 167 GLU GLU A . n A 1 104 ASP 104 168 168 ASP ASP A . n A 1 105 SER 105 169 169 SER SER A . n A 1 106 GLY 106 170 170 GLY GLY A . n A 1 107 LEU 107 171 171 LEU LEU A . n A 1 108 CYS 108 172 172 CYS CYS A . n A 1 109 VAL 109 173 173 VAL VAL A . n A 1 110 LEU 110 174 174 LEU LEU A . n A 1 111 ALA 111 175 175 ALA ALA A . n A 1 112 ARG 112 176 176 ARG ARG A . n A 1 113 LEU 113 177 177 LEU LEU A . n A 1 114 SER 114 178 178 SER SER A . n A 1 115 GLU 115 179 179 GLU GLU A . n A 1 116 ILE 116 180 180 ILE ILE A . n A 1 117 ASP 117 181 ? ? ? A . n A 1 118 VAL 118 182 ? ? ? A . n A 1 119 SER 119 183 ? ? ? A . n A 1 120 SER 120 184 ? ? ? A . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email eom@gist.ac.kr _pdbx_contact_author.name_first 'Soo Hyun' _pdbx_contact_author.name_last Eom _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-1272-5805 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 201 1 ZN ZN A . C 2 ZN 1 202 2 ZN ZN A . D 2 ZN 1 203 3 ZN ZN A . E 3 HOH 1 301 5 HOH HOH A . E 3 HOH 2 302 2 HOH HOH A . E 3 HOH 3 303 1 HOH HOH A . E 3 HOH 4 304 4 HOH HOH A . E 3 HOH 5 305 3 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 70 ? 1 MORE -18 ? 1 'SSA (A^2)' 5830 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 41 ? A ASP 105 ? 1_555 ZN ? D ZN . ? A ZN 203 ? 1_555 OD1 ? A ASP 45 ? A ASP 109 ? 1_555 84.9 ? 2 OD1 ? A ASP 41 ? A ASP 105 ? 1_555 ZN ? D ZN . ? A ZN 203 ? 1_555 O ? A PHE 47 ? A PHE 111 ? 1_555 85.0 ? 3 OD1 ? A ASP 45 ? A ASP 109 ? 1_555 ZN ? D ZN . ? A ZN 203 ? 1_555 O ? A PHE 47 ? A PHE 111 ? 1_555 84.2 ? 4 OD1 ? A ASP 41 ? A ASP 105 ? 1_555 ZN ? D ZN . ? A ZN 203 ? 1_555 OE1 ? A GLU 52 ? A GLU 116 ? 1_555 99.6 ? 5 OD1 ? A ASP 45 ? A ASP 109 ? 1_555 ZN ? D ZN . ? A ZN 203 ? 1_555 OE1 ? A GLU 52 ? A GLU 116 ? 1_555 169.3 ? 6 O ? A PHE 47 ? A PHE 111 ? 1_555 ZN ? D ZN . ? A ZN 203 ? 1_555 OE1 ? A GLU 52 ? A GLU 116 ? 1_555 86.6 ? 7 NE2 ? A HIS 66 ? A HIS 130 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 NZ ? A LYS 70 ? A LYS 134 ? 1_555 135.5 ? 8 NE2 ? A HIS 66 ? A HIS 130 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 OE1 ? A GLU 103 ? A GLU 167 ? 1_555 66.1 ? 9 NZ ? A LYS 70 ? A LYS 134 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 OE1 ? A GLU 103 ? A GLU 167 ? 1_555 73.2 ? 10 NE2 ? A HIS 66 ? A HIS 130 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 OE2 ? A GLU 103 ? A GLU 167 ? 1_555 67.7 ? 11 NZ ? A LYS 70 ? A LYS 134 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 OE2 ? A GLU 103 ? A GLU 167 ? 1_555 70.6 ? 12 OE1 ? A GLU 103 ? A GLU 167 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 OE2 ? A GLU 103 ? A GLU 167 ? 1_555 4.0 ? 13 NE2 ? A HIS 66 ? A HIS 130 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 OE2 ? A GLU 115 ? A GLU 179 ? 1_555 34.9 ? 14 NZ ? A LYS 70 ? A LYS 134 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 OE2 ? A GLU 115 ? A GLU 179 ? 1_555 100.7 ? 15 OE1 ? A GLU 103 ? A GLU 167 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 OE2 ? A GLU 115 ? A GLU 179 ? 1_555 38.5 ? 16 OE2 ? A GLU 103 ? A GLU 167 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 OE2 ? A GLU 115 ? A GLU 179 ? 1_555 38.3 ? 17 OD1 ? A ASP 77 ? A ASP 141 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 OD1 ? A ASP 79 ? A ASP 143 ? 1_555 80.3 ? 18 OD1 ? A ASP 77 ? A ASP 141 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 OD1 ? A ASP 81 ? A ASP 145 ? 1_555 89.1 ? 19 OD1 ? A ASP 79 ? A ASP 143 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 OD1 ? A ASP 81 ? A ASP 145 ? 1_555 69.8 ? 20 OD1 ? A ASP 77 ? A ASP 141 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 O ? A LYS 83 ? A LYS 147 ? 1_555 99.7 ? 21 OD1 ? A ASP 79 ? A ASP 143 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 O ? A LYS 83 ? A LYS 147 ? 1_555 148.4 ? 22 OD1 ? A ASP 81 ? A ASP 145 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 O ? A LYS 83 ? A LYS 147 ? 1_555 78.6 ? 23 OD1 ? A ASP 77 ? A ASP 141 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 OE1 ? A GLU 88 ? A GLU 152 ? 1_555 129.6 ? 24 OD1 ? A ASP 79 ? A ASP 143 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 OE1 ? A GLU 88 ? A GLU 152 ? 1_555 114.6 ? 25 OD1 ? A ASP 81 ? A ASP 145 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 OE1 ? A GLU 88 ? A GLU 152 ? 1_555 141.2 ? 26 O ? A LYS 83 ? A LYS 147 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 OE1 ? A GLU 88 ? A GLU 152 ? 1_555 90.0 ? 27 OD1 ? A ASP 77 ? A ASP 141 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 OE2 ? A GLU 88 ? A GLU 152 ? 1_555 88.9 ? 28 OD1 ? A ASP 79 ? A ASP 143 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 OE2 ? A GLU 88 ? A GLU 152 ? 1_555 78.7 ? 29 OD1 ? A ASP 81 ? A ASP 145 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 OE2 ? A GLU 88 ? A GLU 152 ? 1_555 148.4 ? 30 O ? A LYS 83 ? A LYS 147 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 OE2 ? A GLU 88 ? A GLU 152 ? 1_555 132.8 ? 31 OE1 ? A GLU 88 ? A GLU 152 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 OE2 ? A GLU 88 ? A GLU 152 ? 1_555 51.9 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2023-03-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 z,x,y 3 y,z,x 4 -y,-z,x 5 z,-x,-y 6 -y,z,-x 7 -z,-x,y 8 -z,x,-y 9 y,-z,-x 10 x,-y,-z 11 -x,y,-z 12 -x,-y,z 13 x+1/2,y+1/2,z+1/2 14 z+1/2,x+1/2,y+1/2 15 y+1/2,z+1/2,x+1/2 16 -y+1/2,-z+1/2,x+1/2 17 z+1/2,-x+1/2,-y+1/2 18 -y+1/2,z+1/2,-x+1/2 19 -z+1/2,-x+1/2,y+1/2 20 -z+1/2,x+1/2,-y+1/2 21 y+1/2,-z+1/2,-x+1/2 22 x+1/2,-y+1/2,-z+1/2 23 -x+1/2,y+1/2,-z+1/2 24 -x+1/2,-y+1/2,z+1/2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DIALS ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1-4487 3 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? 0.8.6.1 4 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1-4487 5 # _pdbx_entry_details.entry_id 7YGY _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 108 ? ? 73.49 40.55 2 1 PHE A 144 ? ? 51.76 14.98 3 1 GLU A 179 ? ? -110.64 58.27 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 87 ? CG ? A LYS 23 CG 2 1 Y 1 A LYS 87 ? CD ? A LYS 23 CD 3 1 Y 1 A LYS 87 ? CE ? A LYS 23 CE 4 1 Y 1 A LYS 87 ? NZ ? A LYS 23 NZ 5 1 Y 1 A LYS 99 ? CG ? A LYS 35 CG 6 1 Y 1 A LYS 99 ? CD ? A LYS 35 CD 7 1 Y 1 A LYS 99 ? CE ? A LYS 35 CE 8 1 Y 1 A LYS 99 ? NZ ? A LYS 35 NZ 9 1 Y 1 A LYS 102 ? CG ? A LYS 38 CG 10 1 Y 1 A LYS 102 ? CD ? A LYS 38 CD 11 1 Y 1 A LYS 102 ? CE ? A LYS 38 CE 12 1 Y 1 A LYS 102 ? NZ ? A LYS 38 NZ 13 1 Y 1 A ARG 108 ? CG ? A ARG 44 CG 14 1 Y 1 A ARG 108 ? CD ? A ARG 44 CD 15 1 Y 1 A ARG 108 ? NE ? A ARG 44 NE 16 1 Y 1 A ARG 108 ? CZ ? A ARG 44 CZ 17 1 Y 1 A ARG 108 ? NH1 ? A ARG 44 NH1 18 1 Y 1 A ARG 108 ? NH2 ? A ARG 44 NH2 19 1 Y 1 A LYS 138 ? CG ? A LYS 74 CG 20 1 Y 1 A LYS 138 ? CD ? A LYS 74 CD 21 1 Y 1 A LYS 138 ? CE ? A LYS 74 CE 22 1 Y 1 A LYS 138 ? NZ ? A LYS 74 NZ 23 1 Y 1 A LYS 147 ? CG ? A LYS 83 CG 24 1 Y 1 A LYS 147 ? CD ? A LYS 83 CD 25 1 Y 1 A LYS 147 ? CE ? A LYS 83 CE 26 1 Y 1 A LYS 147 ? NZ ? A LYS 83 NZ 27 1 Y 1 A ARG 151 ? CG ? A ARG 87 CG 28 1 Y 1 A ARG 151 ? CD ? A ARG 87 CD 29 1 Y 1 A ARG 151 ? NE ? A ARG 87 NE 30 1 Y 1 A ARG 151 ? CZ ? A ARG 87 CZ 31 1 Y 1 A ARG 151 ? NH1 ? A ARG 87 NH1 32 1 Y 1 A ARG 151 ? NH2 ? A ARG 87 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 65 ? A GLY 1 2 1 Y 1 A ALA 66 ? A ALA 2 3 1 Y 1 A MET 67 ? A MET 3 4 1 Y 1 A GLY 68 ? A GLY 4 5 1 Y 1 A SER 69 ? A SER 5 6 1 Y 1 A GLY 70 ? A GLY 6 7 1 Y 1 A GLU 71 ? A GLU 7 8 1 Y 1 A PRO 72 ? A PRO 8 9 1 Y 1 A GLN 73 ? A GLN 9 10 1 Y 1 A SER 74 ? A SER 10 11 1 Y 1 A PRO 75 ? A PRO 11 12 1 Y 1 A SER 76 ? A SER 12 13 1 Y 1 A ARG 77 ? A ARG 13 14 1 Y 1 A ARG 78 ? A ARG 14 15 1 Y 1 A VAL 79 ? A VAL 15 16 1 Y 1 A PHE 80 ? A PHE 16 17 1 Y 1 A ASN 81 ? A ASN 17 18 1 Y 1 A ASP 181 ? A ASP 117 19 1 Y 1 A VAL 182 ? A VAL 118 20 1 Y 1 A SER 183 ? A SER 119 21 1 Y 1 A SER 184 ? A SER 120 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Research Foundation (NRF, Korea)' 'Korea, Republic Of' NRF-2021R1A2C1006267 1 'Other private' 'Korea, Republic Of' 'GIST Research Institute (GRI) IIBR' 2 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id ZN _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id ZN _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5i2l _pdbx_initial_refinement_model.details 'Ca2+-bound EFhd2' # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'I 2 3' _space_group.name_Hall 'I 2 2 3' _space_group.IT_number 197 _space_group.crystal_system cubic _space_group.id 1 #