HEADER UNKNOWN FUNCTION 12-JUL-22 7YH2 TITLE TRAPPC3 FROM THORARCHAEOTA AB25 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRAPPC3 FROM THORARCHAEOTA AB25; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDATUS THORARCHAEOTA ARCHAEON AB_25; SOURCE 3 ORGANISM_TAXID: 1837170; SOURCE 4 STRAIN: AB_25; SOURCE 5 GENE: THORAB25_09740; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ASGARD ARCHAEA, TRAPP, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR R.C.ROBINSON,L.T.TRAN REVDAT 3 29-JAN-25 7YH2 1 JRNL REVDAT 2 29-MAY-24 7YH2 1 REMARK REVDAT 1 19-JUL-23 7YH2 0 JRNL AUTH L.T.TRAN,C.AKIL,Y.SENJU,R.C.ROBINSON JRNL TITL THE EUKARYOTIC-LIKE CHARACTERISTICS OF SMALL GTPASE, JRNL TITL 2 ROADBLOCK AND TRAPPC3 PROTEINS FROM ASGARD ARCHAEA. JRNL REF COMMUN BIOL V. 7 273 2024 JRNL REFN ESSN 2399-3642 JRNL PMID 38472392 JRNL DOI 10.1038/S42003-024-05888-1 REMARK 2 REMARK 2 RESOLUTION. 1.91 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.91 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.10 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 25147 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.950 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.1000 - 4.5900 1.00 1792 147 0.1846 0.2194 REMARK 3 2 4.5900 - 3.6400 1.00 1709 152 0.1550 0.1696 REMARK 3 3 3.6400 - 3.1800 1.00 1680 143 0.1607 0.2172 REMARK 3 4 3.1800 - 2.8900 1.00 1664 148 0.1790 0.2225 REMARK 3 5 2.8900 - 2.6900 1.00 1655 145 0.1689 0.2178 REMARK 3 6 2.6900 - 2.5300 1.00 1659 144 0.1628 0.2240 REMARK 3 7 2.5300 - 2.4000 1.00 1648 146 0.1583 0.1872 REMARK 3 8 2.4000 - 2.3000 1.00 1644 145 0.1602 0.2158 REMARK 3 9 2.3000 - 2.2100 1.00 1653 129 0.1620 0.2328 REMARK 3 10 2.2100 - 2.1300 1.00 1640 150 0.1685 0.2130 REMARK 3 11 2.1300 - 2.0700 1.00 1639 132 0.1723 0.2370 REMARK 3 12 2.0700 - 2.0100 1.00 1631 149 0.1813 0.2323 REMARK 3 13 2.0100 - 1.9500 1.00 1638 136 0.1821 0.2596 REMARK 3 14 1.9500 - 1.9100 0.92 1496 133 0.1916 0.2441 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.260 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.5018 38.3131 69.3168 REMARK 3 T TENSOR REMARK 3 T11: 0.1718 T22: 0.1548 REMARK 3 T33: 0.1560 T12: -0.0036 REMARK 3 T13: -0.0170 T23: -0.0121 REMARK 3 L TENSOR REMARK 3 L11: 3.8231 L22: 0.6314 REMARK 3 L33: 2.9710 L12: -1.4098 REMARK 3 L13: 0.7811 L23: -0.4384 REMARK 3 S TENSOR REMARK 3 S11: -0.0295 S12: -0.2276 S13: 0.0427 REMARK 3 S21: 0.0992 S22: 0.0835 S23: -0.0017 REMARK 3 S31: 0.1899 S32: -0.0507 S33: 0.0209 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.3996 42.9341 57.7433 REMARK 3 T TENSOR REMARK 3 T11: 0.1959 T22: 0.2090 REMARK 3 T33: 0.1816 T12: -0.0032 REMARK 3 T13: 0.0102 T23: -0.0354 REMARK 3 L TENSOR REMARK 3 L11: 1.0793 L22: 0.9452 REMARK 3 L33: 1.6813 L12: 0.6503 REMARK 3 L13: -0.4802 L23: 0.2839 REMARK 3 S TENSOR REMARK 3 S11: 0.2525 S12: -0.0539 S13: 0.4415 REMARK 3 S21: -0.0533 S22: 0.0123 S23: -0.2298 REMARK 3 S31: -0.0920 S32: 0.2702 S33: 0.0035 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 48 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.7670 29.5029 46.8111 REMARK 3 T TENSOR REMARK 3 T11: 0.4522 T22: 0.4842 REMARK 3 T33: 0.4201 T12: 0.1557 REMARK 3 T13: -0.0615 T23: -0.0848 REMARK 3 L TENSOR REMARK 3 L11: 0.7477 L22: 0.6961 REMARK 3 L33: 0.4820 L12: 0.5488 REMARK 3 L13: -0.5239 L23: -0.2017 REMARK 3 S TENSOR REMARK 3 S11: 0.1995 S12: 0.4747 S13: -0.1668 REMARK 3 S21: -0.2029 S22: 0.4036 S23: -0.1277 REMARK 3 S31: 0.7780 S32: 0.2491 S33: 0.0154 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 62 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.5048 27.3786 47.6977 REMARK 3 T TENSOR REMARK 3 T11: 0.3706 T22: 0.2633 REMARK 3 T33: 0.2918 T12: 0.0245 REMARK 3 T13: -0.0577 T23: -0.0834 REMARK 3 L TENSOR REMARK 3 L11: 0.8577 L22: 0.8449 REMARK 3 L33: 0.2865 L12: 0.5564 REMARK 3 L13: -0.1820 L23: 0.2320 REMARK 3 S TENSOR REMARK 3 S11: 0.1006 S12: 0.4941 S13: -0.5776 REMARK 3 S21: -0.1370 S22: -0.0235 S23: 0.1768 REMARK 3 S31: 0.6821 S32: -0.3284 S33: 0.0086 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 78 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.7047 31.8299 55.7125 REMARK 3 T TENSOR REMARK 3 T11: 0.2640 T22: 0.2276 REMARK 3 T33: 0.2193 T12: -0.0204 REMARK 3 T13: -0.0267 T23: -0.0151 REMARK 3 L TENSOR REMARK 3 L11: 2.1403 L22: 2.1009 REMARK 3 L33: 2.1125 L12: 0.6608 REMARK 3 L13: 0.1701 L23: -0.4496 REMARK 3 S TENSOR REMARK 3 S11: 0.0547 S12: 0.1619 S13: -0.2526 REMARK 3 S21: -0.0288 S22: -0.0456 S23: 0.0778 REMARK 3 S31: 0.5532 S32: -0.2573 S33: -0.0343 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 118 THROUGH 141 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.6571 38.8077 50.4894 REMARK 3 T TENSOR REMARK 3 T11: 0.1923 T22: 0.2049 REMARK 3 T33: 0.1612 T12: 0.0371 REMARK 3 T13: 0.0033 T23: -0.0419 REMARK 3 L TENSOR REMARK 3 L11: 5.2811 L22: 1.3427 REMARK 3 L33: 1.8445 L12: -0.9344 REMARK 3 L13: -0.8455 L23: 0.5741 REMARK 3 S TENSOR REMARK 3 S11: 0.3980 S12: 0.3877 S13: 0.2971 REMARK 3 S21: -0.3174 S22: -0.0420 S23: -0.1011 REMARK 3 S31: -0.1346 S32: -0.0146 S33: 0.1396 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 142 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.9718 35.2273 53.6266 REMARK 3 T TENSOR REMARK 3 T11: 0.2114 T22: 0.2186 REMARK 3 T33: 0.1683 T12: -0.0200 REMARK 3 T13: -0.0176 T23: -0.0055 REMARK 3 L TENSOR REMARK 3 L11: 1.7584 L22: 2.1388 REMARK 3 L33: 2.3803 L12: -0.7569 REMARK 3 L13: -0.2708 L23: 0.8036 REMARK 3 S TENSOR REMARK 3 S11: 0.2079 S12: 0.2184 S13: 0.1371 REMARK 3 S21: -0.0715 S22: 0.0697 S23: 0.1698 REMARK 3 S31: -0.0549 S32: -0.7796 S33: 0.0452 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.3589 39.0547 67.7984 REMARK 3 T TENSOR REMARK 3 T11: 0.1754 T22: 0.1625 REMARK 3 T33: 0.1768 T12: 0.0109 REMARK 3 T13: -0.0158 T23: -0.0087 REMARK 3 L TENSOR REMARK 3 L11: 2.9882 L22: 1.0531 REMARK 3 L33: 2.7522 L12: 1.3917 REMARK 3 L13: 1.0497 L23: -0.4337 REMARK 3 S TENSOR REMARK 3 S11: -0.0070 S12: 0.1024 S13: 0.0627 REMARK 3 S21: -0.1617 S22: -0.0534 S23: -0.0913 REMARK 3 S31: -0.0762 S32: 0.2006 S33: -0.0003 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 27 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.9533 39.4931 79.9669 REMARK 3 T TENSOR REMARK 3 T11: 0.2064 T22: 0.2578 REMARK 3 T33: 0.2017 T12: -0.0373 REMARK 3 T13: -0.0144 T23: 0.0074 REMARK 3 L TENSOR REMARK 3 L11: 1.1797 L22: 0.7505 REMARK 3 L33: 1.2952 L12: -0.4479 REMARK 3 L13: -0.1480 L23: 0.5334 REMARK 3 S TENSOR REMARK 3 S11: 0.3420 S12: -0.6164 S13: 0.2589 REMARK 3 S21: 0.3079 S22: -0.2809 S23: 0.2053 REMARK 3 S31: -0.0840 S32: -0.1972 S33: -0.0023 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 49 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.8014 22.5821 86.9613 REMARK 3 T TENSOR REMARK 3 T11: 0.3171 T22: 0.4107 REMARK 3 T33: 0.4614 T12: -0.0177 REMARK 3 T13: -0.0467 T23: 0.0682 REMARK 3 L TENSOR REMARK 3 L11: 0.8763 L22: 0.8508 REMARK 3 L33: 0.9036 L12: -0.6851 REMARK 3 L13: -0.2831 L23: -0.0831 REMARK 3 S TENSOR REMARK 3 S11: -0.0318 S12: -0.3251 S13: -0.1172 REMARK 3 S21: 0.2386 S22: -0.2752 S23: -0.1993 REMARK 3 S31: 0.4507 S32: 0.1507 S33: -0.0042 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 78 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.7036 23.0956 87.4250 REMARK 3 T TENSOR REMARK 3 T11: 0.4936 T22: 0.7565 REMARK 3 T33: 0.6716 T12: 0.0238 REMARK 3 T13: -0.1592 T23: 0.0949 REMARK 3 L TENSOR REMARK 3 L11: 0.6008 L22: 0.5722 REMARK 3 L33: 0.5865 L12: 0.0319 REMARK 3 L13: -0.5693 L23: -0.2415 REMARK 3 S TENSOR REMARK 3 S11: 0.3516 S12: -1.1885 S13: -0.9898 REMARK 3 S21: 0.5265 S22: 0.0198 S23: -0.6848 REMARK 3 S31: 0.0602 S32: -0.1337 S33: 0.0082 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 92 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.1747 33.5786 74.6789 REMARK 3 T TENSOR REMARK 3 T11: 0.2161 T22: 0.3121 REMARK 3 T33: 0.3356 T12: 0.0202 REMARK 3 T13: -0.0272 T23: 0.0177 REMARK 3 L TENSOR REMARK 3 L11: 1.4926 L22: 1.3053 REMARK 3 L33: 1.0589 L12: -0.2936 REMARK 3 L13: 0.7768 L23: 0.0655 REMARK 3 S TENSOR REMARK 3 S11: 0.1355 S12: 0.0502 S13: -0.4211 REMARK 3 S21: -0.1334 S22: -0.1448 S23: -0.5737 REMARK 3 S31: 0.1641 S32: 0.4313 S33: 0.0129 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 118 THROUGH 131 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.1634 33.4788 84.9389 REMARK 3 T TENSOR REMARK 3 T11: 0.2195 T22: 0.2628 REMARK 3 T33: 0.2480 T12: -0.0438 REMARK 3 T13: -0.0152 T23: 0.0657 REMARK 3 L TENSOR REMARK 3 L11: 3.8441 L22: 1.4550 REMARK 3 L33: 1.0888 L12: 2.1108 REMARK 3 L13: -1.5949 L23: -1.2541 REMARK 3 S TENSOR REMARK 3 S11: 0.2689 S12: -0.4499 S13: 0.0485 REMARK 3 S21: 0.3779 S22: -0.0726 S23: 0.0593 REMARK 3 S31: -0.3092 S32: -0.0080 S33: 0.0712 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 132 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.1415 33.3666 84.2948 REMARK 3 T TENSOR REMARK 3 T11: 0.2422 T22: 0.3874 REMARK 3 T33: 0.2844 T12: -0.0598 REMARK 3 T13: -0.1018 T23: 0.0642 REMARK 3 L TENSOR REMARK 3 L11: 1.5008 L22: 2.6121 REMARK 3 L33: 1.3130 L12: 1.0415 REMARK 3 L13: 0.6809 L23: -0.9030 REMARK 3 S TENSOR REMARK 3 S11: 0.3689 S12: -0.4467 S13: -0.2137 REMARK 3 S21: 0.2050 S22: -0.4010 S23: -0.2294 REMARK 3 S31: -0.5033 S32: 0.3476 S33: 0.0096 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7YH2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-JUL-22. REMARK 100 THE DEPOSITION ID IS D_1300030907. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : TPS 05A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.158 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25147 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.910 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 11.70 REMARK 200 R MERGE (I) : 0.11200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 58.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.91 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.42600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES PH 7.5 250 MM MG(HCO2)2 REMARK 280 18% PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.65550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.33300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.25100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 36.33300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.65550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.25100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 PRO A 0 REMARK 465 MET A 1 REMARK 465 GLY B -1 REMARK 465 PRO B 0 REMARK 465 MET B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 33 O HOH A 301 2.17 REMARK 500 O HOH A 311 O HOH A 341 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH1 ARG B 90 O ASN B 107 2665 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 100 SG REMARK 620 2 CYS A 103 SG 112.5 REMARK 620 3 CYS A 117 SG 116.4 102.8 REMARK 620 4 CYS A 150 SG 112.0 90.4 119.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 100 SG REMARK 620 2 CYS B 103 SG 112.3 REMARK 620 3 CYS B 117 SG 116.7 102.4 REMARK 620 4 CYS B 150 SG 112.0 90.7 119.0 REMARK 620 N 1 2 3 DBREF1 7YH2 A 1 157 UNP A0A1Q9P883_THOAA DBREF2 7YH2 A A0A1Q9P883 1 157 DBREF1 7YH2 B 1 157 UNP A0A1Q9P883_THOAA DBREF2 7YH2 B A0A1Q9P883 1 157 SEQADV 7YH2 GLY A -1 UNP A0A1Q9P88 EXPRESSION TAG SEQADV 7YH2 PRO A 0 UNP A0A1Q9P88 EXPRESSION TAG SEQADV 7YH2 GLY B -1 UNP A0A1Q9P88 EXPRESSION TAG SEQADV 7YH2 PRO B 0 UNP A0A1Q9P88 EXPRESSION TAG SEQRES 1 A 159 GLY PRO MET PRO LYS ILE GLU ASN PRO LEU LEU ILE SER SEQRES 2 A 159 LEU TYR SER TYR TYR VAL GLU LYS THR LEU SER GLU THR SEQRES 3 A 159 LYS SER ILE GLU GLU ALA ASN GLN ARG LEU ARG GLU LEU SEQRES 4 A 159 GLY LYS GLU ILE GLY GLN GLN VAL TYR LEU ASN THR GLU SEQRES 5 A 159 ILE VAL GLU LYS THR LYS ASP ASN VAL ALA THR ARG GLU SEQRES 6 A 159 ASP VAL ALA LYS LEU ILE GLU ILE ILE TYR LYS VAL LEU SEQRES 7 A 159 PHE ASP LYS LYS PRO ASN ASP ILE ASP MET LYS SER ALA SEQRES 8 A 159 ARG GLY SER VAL ARG ILE THR ASP ASP ASP CYS VAL TRP SEQRES 9 A 159 CYS GLN GLU VAL ASN LEU GLU GLY MET ARG GLY PHE GLY SEQRES 10 A 159 TYR CYS GLU VAL PHE SER GLY ILE LEU GLU ALA VAL LEU SEQRES 11 A 159 GLU PHE LYS ASP VAL ASP ALA LYS VAL PHE GLN GLU MET SEQRES 12 A 159 SER LYS ALA THR GLY ALA ASP SER CYS ILE TRP ASN VAL SEQRES 13 A 159 ARG LEU VAL SEQRES 1 B 159 GLY PRO MET PRO LYS ILE GLU ASN PRO LEU LEU ILE SER SEQRES 2 B 159 LEU TYR SER TYR TYR VAL GLU LYS THR LEU SER GLU THR SEQRES 3 B 159 LYS SER ILE GLU GLU ALA ASN GLN ARG LEU ARG GLU LEU SEQRES 4 B 159 GLY LYS GLU ILE GLY GLN GLN VAL TYR LEU ASN THR GLU SEQRES 5 B 159 ILE VAL GLU LYS THR LYS ASP ASN VAL ALA THR ARG GLU SEQRES 6 B 159 ASP VAL ALA LYS LEU ILE GLU ILE ILE TYR LYS VAL LEU SEQRES 7 B 159 PHE ASP LYS LYS PRO ASN ASP ILE ASP MET LYS SER ALA SEQRES 8 B 159 ARG GLY SER VAL ARG ILE THR ASP ASP ASP CYS VAL TRP SEQRES 9 B 159 CYS GLN GLU VAL ASN LEU GLU GLY MET ARG GLY PHE GLY SEQRES 10 B 159 TYR CYS GLU VAL PHE SER GLY ILE LEU GLU ALA VAL LEU SEQRES 11 B 159 GLU PHE LYS ASP VAL ASP ALA LYS VAL PHE GLN GLU MET SEQRES 12 B 159 SER LYS ALA THR GLY ALA ASP SER CYS ILE TRP ASN VAL SEQRES 13 B 159 ARG LEU VAL HET ZN A 201 1 HET ZN B 201 1 HETNAM ZN ZINC ION FORMUL 3 ZN 2(ZN 2+) FORMUL 5 HOH *160(H2 O) HELIX 1 AA1 ASN A 6 THR A 24 1 19 HELIX 2 AA2 SER A 26 ASN A 48 1 23 HELIX 3 AA3 GLU A 50 THR A 55 1 6 HELIX 4 AA4 THR A 61 ASP A 78 1 18 HELIX 5 AA5 CYS A 117 LYS A 131 1 15 HELIX 6 AA6 SER A 142 GLY A 146 5 5 HELIX 7 AA7 ASN B 6 THR B 24 1 19 HELIX 8 AA8 SER B 26 ASN B 48 1 23 HELIX 9 AA9 GLU B 50 THR B 55 1 6 HELIX 10 AB1 THR B 61 ASP B 78 1 18 HELIX 11 AB2 CYS B 117 LYS B 131 1 15 HELIX 12 AB3 SER B 142 GLY B 146 5 5 SHEET 1 AA1 4 ASP A 83 ASP A 85 0 SHEET 2 AA1 4 SER A 92 ASP A 97 -1 O ARG A 94 N ASP A 85 SHEET 3 AA1 4 CYS A 150 LEU A 156 -1 O VAL A 154 N VAL A 93 SHEET 4 AA1 4 ALA A 135 MET A 141 -1 N PHE A 138 O ASN A 153 SHEET 1 AA2 4 ASP B 83 ASP B 85 0 SHEET 2 AA2 4 SER B 92 ASP B 97 -1 O THR B 96 N ASP B 83 SHEET 3 AA2 4 CYS B 150 LEU B 156 -1 O VAL B 154 N VAL B 93 SHEET 4 AA2 4 ALA B 135 MET B 141 -1 N LYS B 136 O ARG B 155 LINK SG CYS A 100 ZN ZN A 201 1555 1555 2.30 LINK SG CYS A 103 ZN ZN A 201 1555 1555 2.36 LINK SG CYS A 117 ZN ZN A 201 1555 1555 2.33 LINK SG CYS A 150 ZN ZN A 201 1555 1555 2.35 LINK SG CYS B 100 ZN ZN B 201 1555 1555 2.39 LINK SG CYS B 103 ZN ZN B 201 1555 1555 2.35 LINK SG CYS B 117 ZN ZN B 201 1555 1555 2.27 LINK SG CYS B 150 ZN ZN B 201 1555 1555 2.38 CRYST1 63.311 68.502 72.666 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015795 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014598 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013762 0.00000