HEADER VIRAL PROTEIN/IMMUNE SYSTEM 26-JUL-22 7YLD TITLE TWO MONOBODIES RECOGNIZING THE CONSERVED EPITOPES OF SARS-COV-2 N TITLE 2 ANTIGEN APPLICABLE TO THE BROAD COVID-19 DIAGNOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOPROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: NTD; COMPND 5 SYNONYM: N,NUCLEOCAPSID PROTEIN,NC,PROTEIN N; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: NN2; COMPND 9 CHAIN: E, I, F, G; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_COMMON: 2019-NCOV,SARS-COV-2; SOURCE 5 ORGANISM_TAXID: 2697049; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ENGINEERED 10FN3, SARS-COV-2 N, MONOBODY, VIRAL PROTEIN, VIRAL KEYWDS 2 PROTEIN-IMMUNE SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.HU,Y.DU,R.SUN,Q.HAO REVDAT 1 24-APR-24 7YLD 0 JRNL AUTH M.HU,Y.DU,R.SUN,Q.HAO JRNL TITL TWO MONOBODIES RECOGNIZING THE CONSERVED EPITOPES OF JRNL TITL 2 SARS-COV-2 N ANTIGEN APPLICABLE TO THE BROAD COVID-19 JRNL TITL 3 DIAGNOSIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.20.1_4487: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.34 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 28240 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.288 REMARK 3 R VALUE (WORKING SET) : 0.286 REMARK 3 FREE R VALUE : 0.343 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1410 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.3400 - 6.0300 0.97 2711 138 0.2963 0.3501 REMARK 3 2 6.0300 - 4.7900 0.97 2697 136 0.2615 0.3129 REMARK 3 3 4.7900 - 4.1800 0.98 2735 139 0.2565 0.2893 REMARK 3 4 4.1800 - 3.8000 0.96 2674 145 0.2651 0.3480 REMARK 3 5 3.8000 - 3.5300 0.97 2666 145 0.2863 0.3892 REMARK 3 6 3.5300 - 3.3200 0.97 2703 138 0.2731 0.3096 REMARK 3 7 3.3200 - 3.1500 0.96 2718 141 0.3056 0.3645 REMARK 3 8 3.1500 - 3.0200 0.94 2614 133 0.3175 0.3641 REMARK 3 9 3.0200 - 2.9000 0.96 2627 151 0.3228 0.3754 REMARK 3 10 2.9000 - 2.8000 0.96 2685 144 0.4025 0.4793 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.450 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 43.270 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 51.24 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 6203 REMARK 3 ANGLE : 1.519 8469 REMARK 3 CHIRALITY : 0.060 913 REMARK 3 PLANARITY : 0.012 1067 REMARK 3 DIHEDRAL : 7.084 839 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7YLD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1300031142. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-DEC-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34998 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.610 REMARK 200 RESOLUTION RANGE LOW (A) : 64.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.09200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.61 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.66 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.51500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M ZNSO4, 25% (V/V) MPD, REMARK 280 EVAPORATION, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 43 REMARK 465 SER A 44 REMARK 465 GLY A 45 REMARK 465 THR A 46 REMARK 465 ASN A 47 REMARK 465 ASN A 48 REMARK 465 ARG A 92 REMARK 465 ARG A 93 REMARK 465 ILE A 94 REMARK 465 ARG A 95 REMARK 465 GLY A 96 REMARK 465 GLY A 97 REMARK 465 ASP A 98 REMARK 465 GLY A 99 REMARK 465 LYS A 100 REMARK 465 MET A 101 REMARK 465 LYS A 102 REMARK 465 ASP A 103 REMARK 465 ALA A 173 REMARK 465 GLU A 174 REMARK 465 GLY B 43 REMARK 465 SER B 44 REMARK 465 GLY B 45 REMARK 465 THR B 46 REMARK 465 ASN B 47 REMARK 465 ASN B 48 REMARK 465 THR B 49 REMARK 465 ARG B 92 REMARK 465 ARG B 93 REMARK 465 ILE B 94 REMARK 465 ARG B 95 REMARK 465 GLY B 96 REMARK 465 GLY B 97 REMARK 465 ASP B 98 REMARK 465 GLY B 99 REMARK 465 LYS B 100 REMARK 465 MET B 101 REMARK 465 LYS B 102 REMARK 465 ASP B 103 REMARK 465 LEU B 104 REMARK 465 SER B 105 REMARK 465 GLU B 174 REMARK 465 GLY C 43 REMARK 465 SER C 44 REMARK 465 GLY C 45 REMARK 465 THR C 46 REMARK 465 ASN C 47 REMARK 465 ASN C 48 REMARK 465 THR C 49 REMARK 465 THR C 91 REMARK 465 ARG C 92 REMARK 465 ARG C 93 REMARK 465 ILE C 94 REMARK 465 ARG C 95 REMARK 465 GLY C 96 REMARK 465 GLY C 97 REMARK 465 ASP C 98 REMARK 465 GLY C 99 REMARK 465 LYS C 100 REMARK 465 MET C 101 REMARK 465 LYS C 102 REMARK 465 ASP C 103 REMARK 465 ALA C 152 REMARK 465 ASN C 153 REMARK 465 ALA C 173 REMARK 465 GLU C 174 REMARK 465 GLY D 43 REMARK 465 SER D 44 REMARK 465 GLY D 45 REMARK 465 THR D 46 REMARK 465 ASN D 47 REMARK 465 ASN D 48 REMARK 465 THR D 49 REMARK 465 THR D 91 REMARK 465 ARG D 92 REMARK 465 ARG D 93 REMARK 465 ILE D 94 REMARK 465 ARG D 95 REMARK 465 GLY D 96 REMARK 465 GLY D 97 REMARK 465 ASP D 98 REMARK 465 GLY D 99 REMARK 465 LYS D 100 REMARK 465 MET D 101 REMARK 465 LYS D 102 REMARK 465 ASP D 103 REMARK 465 LEU D 104 REMARK 465 SER D 105 REMARK 465 PRO D 151 REMARK 465 ALA D 152 REMARK 465 ASN D 153 REMARK 465 ASN D 154 REMARK 465 ALA D 155 REMARK 465 GLN D 163 REMARK 465 GLU D 174 REMARK 465 GLY E 1 REMARK 465 SER E 2 REMARK 465 ASP E 3 REMARK 465 VAL E 4 REMARK 465 PRO E 5 REMARK 465 ASN E 42 REMARK 465 SER E 43 REMARK 465 TYR E 92 REMARK 465 ARG E 93 REMARK 465 THR E 94 REMARK 465 GLY I 1 REMARK 465 SER I 2 REMARK 465 ASP I 3 REMARK 465 VAL I 4 REMARK 465 GLY I 41 REMARK 465 ASN I 42 REMARK 465 SER I 43 REMARK 465 TYR I 92 REMARK 465 ARG I 93 REMARK 465 THR I 94 REMARK 465 GLY F 1 REMARK 465 SER F 2 REMARK 465 ASP F 3 REMARK 465 VAL F 4 REMARK 465 VAL F 11 REMARK 465 VAL F 12 REMARK 465 GLY F 41 REMARK 465 ASN F 42 REMARK 465 TYR F 92 REMARK 465 ARG F 93 REMARK 465 THR F 94 REMARK 465 GLY G 1 REMARK 465 SER G 2 REMARK 465 ASP G 3 REMARK 465 VAL G 4 REMARK 465 PRO G 5 REMARK 465 VAL G 11 REMARK 465 VAL G 12 REMARK 465 ALA G 13 REMARK 465 THR G 14 REMARK 465 GLY G 40 REMARK 465 GLY G 41 REMARK 465 ASN G 42 REMARK 465 SER G 43 REMARK 465 PRO G 44 REMARK 465 ALA G 57 REMARK 465 LEU G 62 REMARK 465 LYS G 63 REMARK 465 SER G 89 REMARK 465 ILE G 90 REMARK 465 ASN G 91 REMARK 465 TYR G 92 REMARK 465 ARG G 93 REMARK 465 THR G 94 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 67 158.39 -45.38 REMARK 500 ASN A 77 48.62 -88.39 REMARK 500 ARG A 89 101.93 -54.40 REMARK 500 GLU A 118 39.15 -98.56 REMARK 500 LYS A 127 -156.17 -108.73 REMARK 500 LYS A 143 50.18 -96.17 REMARK 500 PRO A 162 -176.06 -58.04 REMARK 500 PHE B 53 -163.15 -104.70 REMARK 500 GLU B 118 51.62 -116.97 REMARK 500 LYS B 127 121.10 165.64 REMARK 500 ILE B 146 -55.40 -143.40 REMARK 500 LEU C 56 72.02 -119.08 REMARK 500 GLN C 83 63.53 -101.99 REMARK 500 LEU C 113 121.97 -39.58 REMARK 500 PRO D 67 -150.07 -70.95 REMARK 500 ASN D 77 45.96 -102.89 REMARK 500 GLN D 83 56.81 -151.90 REMARK 500 GLU D 118 56.94 -107.64 REMARK 500 GLU D 136 -51.13 -15.44 REMARK 500 ASN D 140 49.70 -89.22 REMARK 500 ILE D 146 -61.91 -97.07 REMARK 500 THR D 166 79.30 59.47 REMARK 500 VAL E 11 -78.44 -89.52 REMARK 500 SER E 55 17.48 -144.85 REMARK 500 TRP E 85 -144.78 56.98 REMARK 500 GLN E 86 128.53 -174.58 REMARK 500 ARG I 6 -131.23 52.08 REMARK 500 ASP I 7 -118.25 -118.44 REMARK 500 VAL I 11 -88.60 -108.37 REMARK 500 SER I 55 -16.52 -142.51 REMARK 500 ALA I 71 116.35 -170.09 REMARK 500 TRP I 85 -147.40 66.01 REMARK 500 GLN I 86 102.35 -177.80 REMARK 500 LEU F 8 64.06 39.51 REMARK 500 TYR F 27 -5.92 -149.54 REMARK 500 ASN F 28 -15.88 -147.89 REMARK 500 PRO F 51 149.32 -34.71 REMARK 500 SER F 53 38.56 -83.67 REMARK 500 SER F 55 -17.60 -142.90 REMARK 500 ARG F 78 33.30 -91.66 REMARK 500 TRP F 79 71.22 53.81 REMARK 500 TRP F 85 -64.87 79.56 REMARK 500 GLN F 86 97.59 56.54 REMARK 500 ILE F 88 -159.51 -90.31 REMARK 500 SER F 89 62.41 -168.03 REMARK 500 LEU G 8 98.79 -67.56 REMARK 500 LEU G 18 107.41 -177.88 REMARK 500 TYR G 27 -15.47 -143.37 REMARK 500 ARG G 33 117.45 -166.40 REMARK 500 SER G 55 49.91 -154.78 REMARK 500 REMARK 500 THIS ENTRY HAS 52 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 7YLD A 47 174 UNP P0DTC9 NCAP_SARS2 47 174 DBREF 7YLD B 47 174 UNP P0DTC9 NCAP_SARS2 47 174 DBREF 7YLD C 47 174 UNP P0DTC9 NCAP_SARS2 47 174 DBREF 7YLD D 47 174 UNP P0DTC9 NCAP_SARS2 47 174 DBREF 7YLD E 1 94 PDB 7YLD 7YLD 1 94 DBREF 7YLD I 1 94 PDB 7YLD 7YLD 1 94 DBREF 7YLD F 1 94 PDB 7YLD 7YLD 1 94 DBREF 7YLD G 1 94 PDB 7YLD 7YLD 1 94 SEQADV 7YLD GLY A 43 UNP P0DTC9 EXPRESSION TAG SEQADV 7YLD SER A 44 UNP P0DTC9 EXPRESSION TAG SEQADV 7YLD GLY A 45 UNP P0DTC9 EXPRESSION TAG SEQADV 7YLD THR A 46 UNP P0DTC9 EXPRESSION TAG SEQADV 7YLD GLY B 43 UNP P0DTC9 EXPRESSION TAG SEQADV 7YLD SER B 44 UNP P0DTC9 EXPRESSION TAG SEQADV 7YLD GLY B 45 UNP P0DTC9 EXPRESSION TAG SEQADV 7YLD THR B 46 UNP P0DTC9 EXPRESSION TAG SEQADV 7YLD GLY C 43 UNP P0DTC9 EXPRESSION TAG SEQADV 7YLD SER C 44 UNP P0DTC9 EXPRESSION TAG SEQADV 7YLD GLY C 45 UNP P0DTC9 EXPRESSION TAG SEQADV 7YLD THR C 46 UNP P0DTC9 EXPRESSION TAG SEQADV 7YLD GLY D 43 UNP P0DTC9 EXPRESSION TAG SEQADV 7YLD SER D 44 UNP P0DTC9 EXPRESSION TAG SEQADV 7YLD GLY D 45 UNP P0DTC9 EXPRESSION TAG SEQADV 7YLD THR D 46 UNP P0DTC9 EXPRESSION TAG SEQRES 1 A 132 GLY SER GLY THR ASN ASN THR ALA SER TRP PHE THR ALA SEQRES 2 A 132 LEU THR GLN HIS GLY LYS GLU ASP LEU LYS PHE PRO ARG SEQRES 3 A 132 GLY GLN GLY VAL PRO ILE ASN THR ASN SER SER PRO ASP SEQRES 4 A 132 ASP GLN ILE GLY TYR TYR ARG ARG ALA THR ARG ARG ILE SEQRES 5 A 132 ARG GLY GLY ASP GLY LYS MET LYS ASP LEU SER PRO ARG SEQRES 6 A 132 TRP TYR PHE TYR TYR LEU GLY THR GLY PRO GLU ALA GLY SEQRES 7 A 132 LEU PRO TYR GLY ALA ASN LYS ASP GLY ILE ILE TRP VAL SEQRES 8 A 132 ALA THR GLU GLY ALA LEU ASN THR PRO LYS ASP HIS ILE SEQRES 9 A 132 GLY THR ARG ASN PRO ALA ASN ASN ALA ALA ILE VAL LEU SEQRES 10 A 132 GLN LEU PRO GLN GLY THR THR LEU PRO LYS GLY PHE TYR SEQRES 11 A 132 ALA GLU SEQRES 1 B 132 GLY SER GLY THR ASN ASN THR ALA SER TRP PHE THR ALA SEQRES 2 B 132 LEU THR GLN HIS GLY LYS GLU ASP LEU LYS PHE PRO ARG SEQRES 3 B 132 GLY GLN GLY VAL PRO ILE ASN THR ASN SER SER PRO ASP SEQRES 4 B 132 ASP GLN ILE GLY TYR TYR ARG ARG ALA THR ARG ARG ILE SEQRES 5 B 132 ARG GLY GLY ASP GLY LYS MET LYS ASP LEU SER PRO ARG SEQRES 6 B 132 TRP TYR PHE TYR TYR LEU GLY THR GLY PRO GLU ALA GLY SEQRES 7 B 132 LEU PRO TYR GLY ALA ASN LYS ASP GLY ILE ILE TRP VAL SEQRES 8 B 132 ALA THR GLU GLY ALA LEU ASN THR PRO LYS ASP HIS ILE SEQRES 9 B 132 GLY THR ARG ASN PRO ALA ASN ASN ALA ALA ILE VAL LEU SEQRES 10 B 132 GLN LEU PRO GLN GLY THR THR LEU PRO LYS GLY PHE TYR SEQRES 11 B 132 ALA GLU SEQRES 1 C 132 GLY SER GLY THR ASN ASN THR ALA SER TRP PHE THR ALA SEQRES 2 C 132 LEU THR GLN HIS GLY LYS GLU ASP LEU LYS PHE PRO ARG SEQRES 3 C 132 GLY GLN GLY VAL PRO ILE ASN THR ASN SER SER PRO ASP SEQRES 4 C 132 ASP GLN ILE GLY TYR TYR ARG ARG ALA THR ARG ARG ILE SEQRES 5 C 132 ARG GLY GLY ASP GLY LYS MET LYS ASP LEU SER PRO ARG SEQRES 6 C 132 TRP TYR PHE TYR TYR LEU GLY THR GLY PRO GLU ALA GLY SEQRES 7 C 132 LEU PRO TYR GLY ALA ASN LYS ASP GLY ILE ILE TRP VAL SEQRES 8 C 132 ALA THR GLU GLY ALA LEU ASN THR PRO LYS ASP HIS ILE SEQRES 9 C 132 GLY THR ARG ASN PRO ALA ASN ASN ALA ALA ILE VAL LEU SEQRES 10 C 132 GLN LEU PRO GLN GLY THR THR LEU PRO LYS GLY PHE TYR SEQRES 11 C 132 ALA GLU SEQRES 1 D 132 GLY SER GLY THR ASN ASN THR ALA SER TRP PHE THR ALA SEQRES 2 D 132 LEU THR GLN HIS GLY LYS GLU ASP LEU LYS PHE PRO ARG SEQRES 3 D 132 GLY GLN GLY VAL PRO ILE ASN THR ASN SER SER PRO ASP SEQRES 4 D 132 ASP GLN ILE GLY TYR TYR ARG ARG ALA THR ARG ARG ILE SEQRES 5 D 132 ARG GLY GLY ASP GLY LYS MET LYS ASP LEU SER PRO ARG SEQRES 6 D 132 TRP TYR PHE TYR TYR LEU GLY THR GLY PRO GLU ALA GLY SEQRES 7 D 132 LEU PRO TYR GLY ALA ASN LYS ASP GLY ILE ILE TRP VAL SEQRES 8 D 132 ALA THR GLU GLY ALA LEU ASN THR PRO LYS ASP HIS ILE SEQRES 9 D 132 GLY THR ARG ASN PRO ALA ASN ASN ALA ALA ILE VAL LEU SEQRES 10 D 132 GLN LEU PRO GLN GLY THR THR LEU PRO LYS GLY PHE TYR SEQRES 11 D 132 ALA GLU SEQRES 1 E 94 GLY SER ASP VAL PRO ARG ASP LEU GLU VAL VAL VAL ALA SEQRES 2 E 94 THR PRO THR SER LEU LEU ILE SER TRP PRO ALA ASN TYR SEQRES 3 E 94 TYR ASN ILE ARG TYR TYR ARG ILE THR TYR GLY GLU THR SEQRES 4 E 94 GLY GLY ASN SER PRO VAL GLN GLU PHE THR VAL PRO GLY SEQRES 5 E 94 SER LYS SER THR ALA THR ILE SER GLY LEU LYS PRO GLY SEQRES 6 E 94 VAL ASP TYR THR ILE ALA LEU TYR ALA VAL THR THR ARG SEQRES 7 E 94 TRP ARG LEU TYR GLN MET TRP GLN PRO ILE SER ILE ASN SEQRES 8 E 94 TYR ARG THR SEQRES 1 I 94 GLY SER ASP VAL PRO ARG ASP LEU GLU VAL VAL VAL ALA SEQRES 2 I 94 THR PRO THR SER LEU LEU ILE SER TRP PRO ALA ASN TYR SEQRES 3 I 94 TYR ASN ILE ARG TYR TYR ARG ILE THR TYR GLY GLU THR SEQRES 4 I 94 GLY GLY ASN SER PRO VAL GLN GLU PHE THR VAL PRO GLY SEQRES 5 I 94 SER LYS SER THR ALA THR ILE SER GLY LEU LYS PRO GLY SEQRES 6 I 94 VAL ASP TYR THR ILE ALA LEU TYR ALA VAL THR THR ARG SEQRES 7 I 94 TRP ARG LEU TYR GLN MET TRP GLN PRO ILE SER ILE ASN SEQRES 8 I 94 TYR ARG THR SEQRES 1 F 94 GLY SER ASP VAL PRO ARG ASP LEU GLU VAL VAL VAL ALA SEQRES 2 F 94 THR PRO THR SER LEU LEU ILE SER TRP PRO ALA ASN TYR SEQRES 3 F 94 TYR ASN ILE ARG TYR TYR ARG ILE THR TYR GLY GLU THR SEQRES 4 F 94 GLY GLY ASN SER PRO VAL GLN GLU PHE THR VAL PRO GLY SEQRES 5 F 94 SER LYS SER THR ALA THR ILE SER GLY LEU LYS PRO GLY SEQRES 6 F 94 VAL ASP TYR THR ILE ALA LEU TYR ALA VAL THR THR ARG SEQRES 7 F 94 TRP ARG LEU TYR GLN MET TRP GLN PRO ILE SER ILE ASN SEQRES 8 F 94 TYR ARG THR SEQRES 1 G 94 GLY SER ASP VAL PRO ARG ASP LEU GLU VAL VAL VAL ALA SEQRES 2 G 94 THR PRO THR SER LEU LEU ILE SER TRP PRO ALA ASN TYR SEQRES 3 G 94 TYR ASN ILE ARG TYR TYR ARG ILE THR TYR GLY GLU THR SEQRES 4 G 94 GLY GLY ASN SER PRO VAL GLN GLU PHE THR VAL PRO GLY SEQRES 5 G 94 SER LYS SER THR ALA THR ILE SER GLY LEU LYS PRO GLY SEQRES 6 G 94 VAL ASP TYR THR ILE ALA LEU TYR ALA VAL THR THR ARG SEQRES 7 G 94 TRP ARG LEU TYR GLN MET TRP GLN PRO ILE SER ILE ASN SEQRES 8 G 94 TYR ARG THR HELIX 1 AA1 SER A 79 ASP A 82 5 4 HELIX 2 AA2 SER B 79 ASP B 82 5 4 HELIX 3 AA3 SER C 79 ASP C 82 5 4 HELIX 4 AA4 THR C 115 ALA C 119 5 5 SHEET 1 AA1 4 LEU A 56 THR A 57 0 SHEET 2 AA1 4 ARG A 107 TYR A 112 -1 O TRP A 108 N LEU A 56 SHEET 3 AA1 4 ILE A 84 ARG A 89 -1 N TYR A 86 O TYR A 111 SHEET 4 AA1 4 ILE A 130 ALA A 134 -1 O ILE A 131 N TYR A 87 SHEET 1 AA2 5 ILE B 130 ALA B 134 0 SHEET 2 AA2 5 ILE B 84 ARG B 89 -1 N GLY B 85 O VAL B 133 SHEET 3 AA2 5 ARG B 107 TYR B 112 -1 O TYR B 111 N TYR B 86 SHEET 4 AA2 5 LEU B 56 GLN B 58 -1 N LEU B 56 O TRP B 108 SHEET 5 AA2 5 PHE B 171 TYR B 172 -1 O TYR B 172 N THR B 57 SHEET 1 AA3 3 TRP C 108 TYR C 112 0 SHEET 2 AA3 3 ILE C 84 ARG C 89 -1 N ARG C 88 O TYR C 109 SHEET 3 AA3 3 ILE C 130 ALA C 134 -1 O VAL C 133 N GLY C 85 SHEET 1 AA4 5 ALA C 125 ASN C 126 0 SHEET 2 AA4 5 LEU G 81 MET G 84 -1 O GLN G 83 N ASN C 126 SHEET 3 AA4 5 LEU G 72 VAL G 75 -1 N LEU G 72 O MET G 84 SHEET 4 AA4 5 TYR G 31 TYR G 36 -1 N TYR G 31 O VAL G 75 SHEET 5 AA4 5 GLN G 46 PRO G 51 -1 O VAL G 50 N TYR G 32 SHEET 1 AA5 2 THR D 57 GLN D 58 0 SHEET 2 AA5 2 PHE D 171 TYR D 172 -1 O TYR D 172 N THR D 57 SHEET 1 AA6 3 TRP D 108 TYR D 112 0 SHEET 2 AA6 3 ILE D 84 ARG D 89 -1 N TYR D 86 O TYR D 111 SHEET 3 AA6 3 ILE D 130 ALA D 134 -1 O VAL D 133 N GLY D 85 SHEET 1 AA7 3 GLU E 9 ALA E 13 0 SHEET 2 AA7 3 LEU E 18 SER E 21 -1 O LEU E 19 N VAL E 12 SHEET 3 AA7 3 THR E 56 ILE E 59 -1 O ILE E 59 N LEU E 18 SHEET 1 AA8 4 GLN E 46 PRO E 51 0 SHEET 2 AA8 4 ILE E 29 GLU E 38 -1 N TYR E 32 O VAL E 50 SHEET 3 AA8 4 TYR E 68 THR E 76 -1 O TYR E 73 N ARG E 33 SHEET 4 AA8 4 LEU E 81 MET E 84 -1 O TYR E 82 N ALA E 74 SHEET 1 AA9 3 VAL I 10 ALA I 13 0 SHEET 2 AA9 3 LEU I 18 SER I 21 -1 O LEU I 19 N VAL I 11 SHEET 3 AA9 3 THR I 56 ILE I 59 -1 O ALA I 57 N ILE I 20 SHEET 1 AB1 4 GLN I 46 PRO I 51 0 SHEET 2 AB1 4 ILE I 29 GLU I 38 -1 N ILE I 34 O PHE I 48 SHEET 3 AB1 4 LEU I 72 THR I 76 -1 O VAL I 75 N TYR I 31 SHEET 4 AB1 4 LEU I 81 MET I 84 -1 O TYR I 82 N ALA I 74 SHEET 1 AB2 4 GLN I 46 PRO I 51 0 SHEET 2 AB2 4 ILE I 29 GLU I 38 -1 N ILE I 34 O PHE I 48 SHEET 3 AB2 4 TYR I 68 THR I 69 -1 O THR I 69 N GLY I 37 SHEET 4 AB2 4 ILE I 88 SER I 89 -1 O SER I 89 N TYR I 68 SHEET 1 AB3 3 GLU F 9 VAL F 10 0 SHEET 2 AB3 3 SER F 17 SER F 21 -1 O SER F 21 N GLU F 9 SHEET 3 AB3 3 THR F 14 THR F 14 -1 N THR F 14 O SER F 17 SHEET 1 AB4 3 GLU F 9 VAL F 10 0 SHEET 2 AB4 3 SER F 17 SER F 21 -1 O SER F 21 N GLU F 9 SHEET 3 AB4 3 THR F 56 SER F 60 -1 O ALA F 57 N ILE F 20 SHEET 1 AB5 4 PHE F 48 PRO F 51 0 SHEET 2 AB5 4 ILE F 29 ILE F 34 -1 N TYR F 32 O VAL F 50 SHEET 3 AB5 4 LEU F 72 THR F 76 -1 O VAL F 75 N ARG F 30 SHEET 4 AB5 4 LEU F 81 GLN F 83 -1 O TYR F 82 N ALA F 74 CRYST1 52.551 74.303 87.451 108.51 104.22 96.67 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019029 0.002225 0.006024 0.00000 SCALE2 0.000000 0.013550 0.005218 0.00000 SCALE3 0.000000 0.000000 0.012641 0.00000