HEADER HYDROLASE 06-AUG-22 7YQF TITLE CRYSTAL STRUCTURE OF PDE4D COMPLEXED WITH GLYCYRRHISOFLAVONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE 4D; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PDE4D, DPDE3, PDE43; COMPND 5 EC: 3.1.4.53; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PDE4D, DPDE3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS PDE4D, COMPLEX, GLYCYRRHISOFLAVONE, INHIBITOR, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.Y.LIU,M.J.LI,Y.C.XU REVDAT 2 29-NOV-23 7YQF 1 REMARK REVDAT 1 12-JUL-23 7YQF 0 JRNL AUTH H.XU,S.LI,J.LIU,J.CHENG,L.KANG,W.LI,Y.ZHONG,C.WEI,L.FU,J.QI, JRNL AUTH 2 Y.ZHANG,M.YOU,Z.ZHOU,C.ZHANG,H.SU,S.YAO,Z.ZHOU,Y.SHI,R.DENG, JRNL AUTH 3 Q.LV,F.LI,F.QI,J.CHEN,S.ZHANG,X.MA,Z.XU,S.LI,Y.XU,K.PENG, JRNL AUTH 4 Y.SHI,H.JIANG,G.F.GAO,L.HUANG JRNL TITL BIOACTIVE COMPOUNDS FROM HUASHI BAIDU DECOCTION POSSESS BOTH JRNL TITL 2 ANTIVIRAL AND ANTI-INFLAMMATORY EFFECTS AGAINST COVID-19. JRNL REF PROC.NATL.ACAD.SCI.USA V. 120 75120 2023 JRNL REFN ESSN 1091-6490 JRNL PMID 37094153 JRNL DOI 10.1073/PNAS.2301775120 REMARK 2 REMARK 2 RESOLUTION. 1.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.39 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 112641 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 5621 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.3900 - 4.7700 1.00 3865 212 0.2085 0.2255 REMARK 3 2 4.7700 - 3.7900 1.00 3722 208 0.1859 0.2096 REMARK 3 3 3.7900 - 3.3100 1.00 3689 189 0.2056 0.2397 REMARK 3 4 3.3100 - 3.0100 1.00 3641 196 0.2160 0.2569 REMARK 3 5 3.0100 - 2.7900 1.00 3660 182 0.2208 0.2286 REMARK 3 6 2.7900 - 2.6300 1.00 3608 201 0.2141 0.2303 REMARK 3 7 2.6300 - 2.5000 1.00 3623 192 0.2230 0.2352 REMARK 3 8 2.5000 - 2.3900 1.00 3629 174 0.2156 0.2294 REMARK 3 9 2.3900 - 2.3000 1.00 3600 189 0.2174 0.2399 REMARK 3 10 2.3000 - 2.2200 1.00 3602 199 0.2186 0.2632 REMARK 3 11 2.2200 - 2.1500 1.00 3605 191 0.2186 0.2503 REMARK 3 12 2.1500 - 2.0900 1.00 3613 184 0.2099 0.2474 REMARK 3 13 2.0900 - 2.0300 1.00 3569 193 0.2201 0.2453 REMARK 3 14 2.0300 - 1.9800 1.00 3570 192 0.2230 0.2303 REMARK 3 15 1.9800 - 1.9400 1.00 3609 195 0.2305 0.2993 REMARK 3 16 1.9400 - 1.9000 1.00 3613 162 0.2419 0.2643 REMARK 3 17 1.9000 - 1.8600 1.00 3535 182 0.2335 0.2931 REMARK 3 18 1.8600 - 1.8200 1.00 3614 169 0.2374 0.2632 REMARK 3 19 1.8200 - 1.7900 1.00 3586 186 0.2263 0.2676 REMARK 3 20 1.7900 - 1.7600 1.00 3546 195 0.2263 0.2549 REMARK 3 21 1.7600 - 1.7300 1.00 3548 196 0.2336 0.2950 REMARK 3 22 1.7300 - 1.7000 1.00 3568 178 0.2429 0.2799 REMARK 3 23 1.7000 - 1.6800 1.00 3531 206 0.2448 0.2709 REMARK 3 24 1.6800 - 1.6600 1.00 3591 168 0.2427 0.3023 REMARK 3 25 1.6600 - 1.6300 1.00 3542 193 0.2412 0.2806 REMARK 3 26 1.6300 - 1.6100 1.00 3594 164 0.2406 0.2670 REMARK 3 27 1.6100 - 1.5900 0.98 3497 186 0.2418 0.2736 REMARK 3 28 1.5900 - 1.5700 0.95 3346 182 0.2489 0.2710 REMARK 3 29 1.5700 - 1.5500 0.92 3264 173 0.2626 0.3030 REMARK 3 30 1.5500 - 1.5400 0.85 3040 184 0.2793 0.2828 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 88 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.6369 12.4243 12.9135 REMARK 3 T TENSOR REMARK 3 T11: 0.3115 T22: 0.2173 REMARK 3 T33: 0.1621 T12: 0.0683 REMARK 3 T13: 0.0176 T23: 0.0108 REMARK 3 L TENSOR REMARK 3 L11: 5.8246 L22: 7.9523 REMARK 3 L33: 5.0002 L12: 1.8285 REMARK 3 L13: 0.0271 L23: -1.3955 REMARK 3 S TENSOR REMARK 3 S11: 0.1613 S12: 0.5305 S13: 0.3620 REMARK 3 S21: -0.9199 S22: -0.0947 S23: 0.2092 REMARK 3 S31: -0.4093 S32: -0.1768 S33: -0.0560 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 117 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.0912 11.6183 27.2353 REMARK 3 T TENSOR REMARK 3 T11: 0.1407 T22: 0.1014 REMARK 3 T33: 0.1398 T12: 0.0195 REMARK 3 T13: -0.0001 T23: 0.0046 REMARK 3 L TENSOR REMARK 3 L11: 1.8878 L22: 1.5653 REMARK 3 L33: 2.2599 L12: -0.3383 REMARK 3 L13: -0.6212 L23: 0.4477 REMARK 3 S TENSOR REMARK 3 S11: 0.0858 S12: 0.0834 S13: 0.1604 REMARK 3 S21: -0.1295 S22: -0.0546 S23: 0.1588 REMARK 3 S31: -0.2627 S32: -0.1643 S33: -0.0300 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 200 THROUGH 227 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.8176 6.0266 38.6561 REMARK 3 T TENSOR REMARK 3 T11: 0.1306 T22: 0.1678 REMARK 3 T33: 0.1962 T12: -0.0289 REMARK 3 T13: 0.0007 T23: -0.0083 REMARK 3 L TENSOR REMARK 3 L11: 4.4498 L22: 2.1798 REMARK 3 L33: 5.4029 L12: -1.4345 REMARK 3 L13: -0.0580 L23: -0.6112 REMARK 3 S TENSOR REMARK 3 S11: -0.0686 S12: -0.1739 S13: 0.0558 REMARK 3 S21: 0.0609 S22: 0.0674 S23: -0.3094 REMARK 3 S31: -0.0511 S32: 0.5653 S33: 0.0037 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 228 THROUGH 271 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.7335 13.2138 39.3638 REMARK 3 T TENSOR REMARK 3 T11: 0.1389 T22: 0.1150 REMARK 3 T33: 0.1132 T12: -0.0172 REMARK 3 T13: 0.0092 T23: -0.0199 REMARK 3 L TENSOR REMARK 3 L11: 3.4070 L22: 2.4596 REMARK 3 L33: 1.6921 L12: -1.6454 REMARK 3 L13: -0.3169 L23: -0.2454 REMARK 3 S TENSOR REMARK 3 S11: 0.0676 S12: -0.1370 S13: 0.1303 REMARK 3 S21: 0.0949 S22: -0.0406 S23: 0.0793 REMARK 3 S31: -0.2518 S32: -0.0608 S33: -0.0154 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 272 THROUGH 325 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.2501 -6.9488 33.2621 REMARK 3 T TENSOR REMARK 3 T11: 0.2016 T22: 0.1370 REMARK 3 T33: 0.2474 T12: -0.0407 REMARK 3 T13: 0.0425 T23: 0.0124 REMARK 3 L TENSOR REMARK 3 L11: 1.0537 L22: 2.5195 REMARK 3 L33: 3.2910 L12: 0.0056 REMARK 3 L13: -0.9283 L23: -0.0531 REMARK 3 S TENSOR REMARK 3 S11: -0.0974 S12: -0.0597 S13: -0.2720 REMARK 3 S21: 0.2854 S22: -0.0185 S23: 0.3630 REMARK 3 S31: 0.3917 S32: -0.2636 S33: 0.1043 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 326 THROUGH 349 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.5017 1.5627 20.4276 REMARK 3 T TENSOR REMARK 3 T11: 0.1609 T22: 0.2245 REMARK 3 T33: 0.1837 T12: -0.0041 REMARK 3 T13: 0.0618 T23: 0.0041 REMARK 3 L TENSOR REMARK 3 L11: 4.8109 L22: 1.7201 REMARK 3 L33: 4.3735 L12: -0.0226 REMARK 3 L13: 2.9187 L23: 0.3968 REMARK 3 S TENSOR REMARK 3 S11: 0.0485 S12: 0.1402 S13: 0.0735 REMARK 3 S21: -0.1833 S22: 0.0129 S23: -0.2758 REMARK 3 S31: -0.0107 S32: 0.6855 S33: -0.0568 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 350 THROUGH 375 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.7685 -7.0107 23.7842 REMARK 3 T TENSOR REMARK 3 T11: 0.2427 T22: 0.2931 REMARK 3 T33: 0.3824 T12: 0.0888 REMARK 3 T13: -0.0052 T23: 0.0342 REMARK 3 L TENSOR REMARK 3 L11: 8.5040 L22: 4.0798 REMARK 3 L33: 4.0881 L12: 5.6829 REMARK 3 L13: 3.9904 L23: 3.7940 REMARK 3 S TENSOR REMARK 3 S11: 0.0586 S12: 0.1560 S13: -0.5166 REMARK 3 S21: 0.1598 S22: 0.2608 S23: -0.6231 REMARK 3 S31: 0.3307 S32: 0.6564 S33: -0.3110 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 376 THROUGH 392 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.1285 -10.9725 25.1222 REMARK 3 T TENSOR REMARK 3 T11: 0.3001 T22: 0.1551 REMARK 3 T33: 0.2535 T12: -0.0694 REMARK 3 T13: 0.0625 T23: -0.0487 REMARK 3 L TENSOR REMARK 3 L11: 4.8271 L22: 2.8676 REMARK 3 L33: 4.4117 L12: 1.7311 REMARK 3 L13: -0.5398 L23: 0.1098 REMARK 3 S TENSOR REMARK 3 S11: -0.0672 S12: 0.1103 S13: -0.5782 REMARK 3 S21: 0.1514 S22: -0.1851 S23: 0.3193 REMARK 3 S31: 0.8245 S32: -0.4527 S33: 0.2099 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 393 THROUGH 410 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.1260 -11.7000 13.7119 REMARK 3 T TENSOR REMARK 3 T11: 0.2788 T22: 0.1299 REMARK 3 T33: 0.1839 T12: 0.0093 REMARK 3 T13: 0.0207 T23: -0.0108 REMARK 3 L TENSOR REMARK 3 L11: 8.0874 L22: 4.7895 REMARK 3 L33: 7.2500 L12: -2.8311 REMARK 3 L13: -2.8487 L23: -0.3777 REMARK 3 S TENSOR REMARK 3 S11: -0.1499 S12: 0.3614 S13: -0.7730 REMARK 3 S21: -0.0601 S22: -0.2938 S23: 0.0540 REMARK 3 S31: 0.7843 S32: 0.1424 S33: 0.4598 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 88 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.9344 4.7564 69.3009 REMARK 3 T TENSOR REMARK 3 T11: 0.3568 T22: 0.7927 REMARK 3 T33: 0.2808 T12: 0.3409 REMARK 3 T13: -0.0788 T23: -0.0594 REMARK 3 L TENSOR REMARK 3 L11: 1.9914 L22: 1.2652 REMARK 3 L33: 3.6690 L12: 0.2232 REMARK 3 L13: -2.1088 L23: -0.5382 REMARK 3 S TENSOR REMARK 3 S11: -0.2578 S12: -0.8909 S13: -0.0315 REMARK 3 S21: 0.2576 S22: 0.1943 S23: -0.3778 REMARK 3 S31: 0.6408 S32: 1.6840 S33: 0.0289 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 200 THROUGH 253 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.4621 10.6321 53.9901 REMARK 3 T TENSOR REMARK 3 T11: 0.1364 T22: 0.1360 REMARK 3 T33: 0.1400 T12: 0.0044 REMARK 3 T13: 0.0093 T23: -0.0236 REMARK 3 L TENSOR REMARK 3 L11: 3.6140 L22: 2.8675 REMARK 3 L33: 4.9799 L12: -0.5327 REMARK 3 L13: -0.0766 L23: 0.5283 REMARK 3 S TENSOR REMARK 3 S11: -0.1052 S12: 0.0802 S13: 0.2593 REMARK 3 S21: -0.0179 S22: 0.2079 S23: -0.2665 REMARK 3 S31: -0.0528 S32: 0.2417 S33: -0.0752 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 254 THROUGH 302 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.5871 -7.6002 57.3902 REMARK 3 T TENSOR REMARK 3 T11: 0.7370 T22: 0.2191 REMARK 3 T33: 0.2801 T12: 0.0971 REMARK 3 T13: 0.1893 T23: -0.0468 REMARK 3 L TENSOR REMARK 3 L11: 1.2201 L22: 3.0424 REMARK 3 L33: 1.1755 L12: -0.0276 REMARK 3 L13: 0.5043 L23: -0.6428 REMARK 3 S TENSOR REMARK 3 S11: -0.8386 S12: 0.2055 S13: -0.3400 REMARK 3 S21: 0.0997 S22: 0.4313 S23: 0.0867 REMARK 3 S31: 1.4198 S32: 0.0431 S33: 0.3843 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 303 THROUGH 410 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.3127 2.9470 72.4778 REMARK 3 T TENSOR REMARK 3 T11: 0.3892 T22: 0.1910 REMARK 3 T33: 0.1798 T12: 0.0803 REMARK 3 T13: -0.0094 T23: -0.0153 REMARK 3 L TENSOR REMARK 3 L11: 2.5877 L22: 0.6269 REMARK 3 L33: 5.7672 L12: 0.1845 REMARK 3 L13: -3.2428 L23: -0.1384 REMARK 3 S TENSOR REMARK 3 S11: -0.1703 S12: 0.0393 S13: 0.0205 REMARK 3 S21: -0.0507 S22: 0.0615 S23: 0.0139 REMARK 3 S31: 0.6402 S32: -0.0669 S33: 0.0899 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7YQF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1300031414. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-OCT-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL02U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 S 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 112761 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.540 REMARK 200 RESOLUTION RANGE LOW (A) : 54.290 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 12.40 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.54 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.62 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.7 REMARK 200 DATA REDUNDANCY IN SHELL : 9.00 REMARK 200 R MERGE FOR SHELL (I) : 0.66700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.2 REMARK 200 STARTING MODEL: 7CBQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES, 0.2 M MGCL2, 10 % (V/V) REMARK 280 ISOPROPANOL, 30 % (V/V) ETHYLENE GLYCOL, 18 %(W/V) PEG 3350, PH REMARK 280 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.78500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 81.57150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.37600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 81.57150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.78500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.37600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 65 REMARK 465 GLY A 66 REMARK 465 SER A 67 REMARK 465 SER A 68 REMARK 465 HIS A 69 REMARK 465 HIS A 70 REMARK 465 HIS A 71 REMARK 465 HIS A 72 REMARK 465 HIS A 73 REMARK 465 HIS A 74 REMARK 465 SER A 75 REMARK 465 SER A 76 REMARK 465 GLY A 77 REMARK 465 LEU A 78 REMARK 465 VAL A 79 REMARK 465 PRO A 80 REMARK 465 ARG A 81 REMARK 465 GLY A 82 REMARK 465 SER A 83 REMARK 465 HIS A 84 REMARK 465 MET A 85 REMARK 465 THR A 86 REMARK 465 GLU A 87 REMARK 465 PRO A 411 REMARK 465 GLN A 412 REMARK 465 SER A 413 REMARK 465 MET B 65 REMARK 465 GLY B 66 REMARK 465 SER B 67 REMARK 465 SER B 68 REMARK 465 HIS B 69 REMARK 465 HIS B 70 REMARK 465 HIS B 71 REMARK 465 HIS B 72 REMARK 465 HIS B 73 REMARK 465 HIS B 74 REMARK 465 SER B 75 REMARK 465 SER B 76 REMARK 465 GLY B 77 REMARK 465 LEU B 78 REMARK 465 VAL B 79 REMARK 465 PRO B 80 REMARK 465 ARG B 81 REMARK 465 GLY B 82 REMARK 465 SER B 83 REMARK 465 HIS B 84 REMARK 465 MET B 85 REMARK 465 THR B 86 REMARK 465 GLU B 87 REMARK 465 THR B 293 REMARK 465 SER B 294 REMARK 465 SER B 295 REMARK 465 GLY B 296 REMARK 465 VAL B 297 REMARK 465 LEU B 298 REMARK 465 PRO B 390 REMARK 465 PRO B 411 REMARK 465 GLN B 412 REMARK 465 SER B 413 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 133 CG CD CE NZ REMARK 470 LYS A 239 CG CD CE NZ REMARK 470 LYS A 254 CG CD CE NZ REMARK 470 LYS A 255 CG CD CE NZ REMARK 470 ARG A 342 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 349 CG CD OE1 OE2 REMARK 470 GLN B 88 CG CD OE1 NE2 REMARK 470 GLU B 89 CG CD OE1 OE2 REMARK 470 ASP B 90 CG OD1 OD2 REMARK 470 VAL B 91 CG1 CG2 REMARK 470 VAL B 99 CG1 CG2 REMARK 470 ASN B 100 CG OD1 ND2 REMARK 470 LYS B 101 CG CD CE NZ REMARK 470 GLU B 111 CG CD OE1 OE2 REMARK 470 ASP B 130 CG OD1 OD2 REMARK 470 LYS B 133 CG CD CE NZ REMARK 470 LYS B 136 CG CD CE NZ REMARK 470 GLU B 182 CG CD OE1 OE2 REMARK 470 VAL B 184 CG1 CG2 REMARK 470 ASP B 187 CG OD1 OD2 REMARK 470 LYS B 254 CG CD CE NZ REMARK 470 LYS B 255 CG CD CE NZ REMARK 470 GLU B 288 CG CD OE1 OE2 REMARK 470 LYS B 290 CG CD CE NZ REMARK 470 LYS B 291 CG CD CE NZ REMARK 470 VAL B 292 CG1 CG2 REMARK 470 LEU B 299 CG CD1 CD2 REMARK 470 LEU B 300 CG CD1 CD2 REMARK 470 ARG B 306 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 353 CG CD OE1 OE2 REMARK 470 VAL B 388 CG1 CG2 REMARK 470 HIS B 389 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 201 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ASP B 201 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 104 140.75 -39.07 REMARK 500 ASN A 161 -169.83 -129.84 REMARK 500 SER A 227 56.35 39.76 REMARK 500 ILE A 376 -61.07 -122.83 REMARK 500 LEU B 104 140.10 -36.72 REMARK 500 ASN B 161 -167.28 -129.63 REMARK 500 SER B 227 57.04 37.92 REMARK 500 ILE B 376 -59.12 -122.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 ZN A 601 REMARK 615 MG A 602 REMARK 615 ZN B 601 REMARK 615 MG B 602 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 164 NE2 REMARK 620 2 HIS A 200 NE2 94.6 REMARK 620 3 ASP A 201 OD2 85.0 84.2 REMARK 620 4 ASP A 318 OD1 88.2 88.6 169.7 REMARK 620 5 HOH A 714 O 174.1 91.1 94.1 93.4 REMARK 620 6 HOH A 753 O 89.0 176.3 97.2 90.4 85.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 201 OD1 REMARK 620 2 HOH A 705 O 85.8 REMARK 620 3 HOH A 714 O 93.1 93.4 REMARK 620 4 HOH A 730 O 170.5 87.6 94.2 REMARK 620 5 HOH A 773 O 85.7 94.8 171.6 88.0 REMARK 620 6 HOH A 802 O 96.8 177.3 85.5 90.0 86.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 164 NE2 REMARK 620 2 HIS B 200 NE2 97.2 REMARK 620 3 ASP B 201 OD2 93.8 86.3 REMARK 620 4 ASP B 318 OD1 79.5 89.1 171.4 REMARK 620 5 HOH B 702 O 167.5 93.8 92.8 94.8 REMARK 620 6 HOH B 752 O 86.4 175.7 95.9 89.2 82.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 201 OD1 REMARK 620 2 HOH B 702 O 93.2 REMARK 620 3 HOH B 719 O 84.9 96.5 REMARK 620 4 HOH B 720 O 169.2 96.0 88.5 REMARK 620 5 HOH B 735 O 85.0 169.8 93.4 86.9 REMARK 620 6 HOH B 768 O 95.6 84.1 179.3 90.9 86.1 REMARK 620 N 1 2 3 4 5 DBREF 7YQF A 86 413 UNP Q08499 PDE4D_HUMAN 388 715 DBREF 7YQF B 86 413 UNP Q08499 PDE4D_HUMAN 388 715 SEQADV 7YQF MET A 65 UNP Q08499 EXPRESSION TAG SEQADV 7YQF GLY A 66 UNP Q08499 EXPRESSION TAG SEQADV 7YQF SER A 67 UNP Q08499 EXPRESSION TAG SEQADV 7YQF SER A 68 UNP Q08499 EXPRESSION TAG SEQADV 7YQF HIS A 69 UNP Q08499 EXPRESSION TAG SEQADV 7YQF HIS A 70 UNP Q08499 EXPRESSION TAG SEQADV 7YQF HIS A 71 UNP Q08499 EXPRESSION TAG SEQADV 7YQF HIS A 72 UNP Q08499 EXPRESSION TAG SEQADV 7YQF HIS A 73 UNP Q08499 EXPRESSION TAG SEQADV 7YQF HIS A 74 UNP Q08499 EXPRESSION TAG SEQADV 7YQF SER A 75 UNP Q08499 EXPRESSION TAG SEQADV 7YQF SER A 76 UNP Q08499 EXPRESSION TAG SEQADV 7YQF GLY A 77 UNP Q08499 EXPRESSION TAG SEQADV 7YQF LEU A 78 UNP Q08499 EXPRESSION TAG SEQADV 7YQF VAL A 79 UNP Q08499 EXPRESSION TAG SEQADV 7YQF PRO A 80 UNP Q08499 EXPRESSION TAG SEQADV 7YQF ARG A 81 UNP Q08499 EXPRESSION TAG SEQADV 7YQF GLY A 82 UNP Q08499 EXPRESSION TAG SEQADV 7YQF SER A 83 UNP Q08499 EXPRESSION TAG SEQADV 7YQF HIS A 84 UNP Q08499 EXPRESSION TAG SEQADV 7YQF MET A 85 UNP Q08499 EXPRESSION TAG SEQADV 7YQF MET B 65 UNP Q08499 EXPRESSION TAG SEQADV 7YQF GLY B 66 UNP Q08499 EXPRESSION TAG SEQADV 7YQF SER B 67 UNP Q08499 EXPRESSION TAG SEQADV 7YQF SER B 68 UNP Q08499 EXPRESSION TAG SEQADV 7YQF HIS B 69 UNP Q08499 EXPRESSION TAG SEQADV 7YQF HIS B 70 UNP Q08499 EXPRESSION TAG SEQADV 7YQF HIS B 71 UNP Q08499 EXPRESSION TAG SEQADV 7YQF HIS B 72 UNP Q08499 EXPRESSION TAG SEQADV 7YQF HIS B 73 UNP Q08499 EXPRESSION TAG SEQADV 7YQF HIS B 74 UNP Q08499 EXPRESSION TAG SEQADV 7YQF SER B 75 UNP Q08499 EXPRESSION TAG SEQADV 7YQF SER B 76 UNP Q08499 EXPRESSION TAG SEQADV 7YQF GLY B 77 UNP Q08499 EXPRESSION TAG SEQADV 7YQF LEU B 78 UNP Q08499 EXPRESSION TAG SEQADV 7YQF VAL B 79 UNP Q08499 EXPRESSION TAG SEQADV 7YQF PRO B 80 UNP Q08499 EXPRESSION TAG SEQADV 7YQF ARG B 81 UNP Q08499 EXPRESSION TAG SEQADV 7YQF GLY B 82 UNP Q08499 EXPRESSION TAG SEQADV 7YQF SER B 83 UNP Q08499 EXPRESSION TAG SEQADV 7YQF HIS B 84 UNP Q08499 EXPRESSION TAG SEQADV 7YQF MET B 85 UNP Q08499 EXPRESSION TAG SEQRES 1 A 349 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 349 LEU VAL PRO ARG GLY SER HIS MET THR GLU GLN GLU ASP SEQRES 3 A 349 VAL LEU ALA LYS GLU LEU GLU ASP VAL ASN LYS TRP GLY SEQRES 4 A 349 LEU HIS VAL PHE ARG ILE ALA GLU LEU SER GLY ASN ARG SEQRES 5 A 349 PRO LEU THR VAL ILE MET HIS THR ILE PHE GLN GLU ARG SEQRES 6 A 349 ASP LEU LEU LYS THR PHE LYS ILE PRO VAL ASP THR LEU SEQRES 7 A 349 ILE THR TYR LEU MET THR LEU GLU ASP HIS TYR HIS ALA SEQRES 8 A 349 ASP VAL ALA TYR HIS ASN ASN ILE HIS ALA ALA ASP VAL SEQRES 9 A 349 VAL GLN SER THR HIS VAL LEU LEU SER THR PRO ALA LEU SEQRES 10 A 349 GLU ALA VAL PHE THR ASP LEU GLU ILE LEU ALA ALA ILE SEQRES 11 A 349 PHE ALA SER ALA ILE HIS ASP VAL ASP HIS PRO GLY VAL SEQRES 12 A 349 SER ASN GLN PHE LEU ILE ASN THR ASN SER GLU LEU ALA SEQRES 13 A 349 LEU MET TYR ASN ASP SER SER VAL LEU GLU ASN HIS HIS SEQRES 14 A 349 LEU ALA VAL GLY PHE LYS LEU LEU GLN GLU GLU ASN CYS SEQRES 15 A 349 ASP ILE PHE GLN ASN LEU THR LYS LYS GLN ARG GLN SER SEQRES 16 A 349 LEU ARG LYS MET VAL ILE ASP ILE VAL LEU ALA THR ASP SEQRES 17 A 349 MET SER LYS HIS MET ASN LEU LEU ALA ASP LEU LYS THR SEQRES 18 A 349 MET VAL GLU THR LYS LYS VAL THR SER SER GLY VAL LEU SEQRES 19 A 349 LEU LEU ASP ASN TYR SER ASP ARG ILE GLN VAL LEU GLN SEQRES 20 A 349 ASN MET VAL HIS CYS ALA ASP LEU SER ASN PRO THR LYS SEQRES 21 A 349 PRO LEU GLN LEU TYR ARG GLN TRP THR ASP ARG ILE MET SEQRES 22 A 349 GLU GLU PHE PHE ARG GLN GLY ASP ARG GLU ARG GLU ARG SEQRES 23 A 349 GLY MET GLU ILE SER PRO MET CYS ASP LYS HIS ASN ALA SEQRES 24 A 349 SER VAL GLU LYS SER GLN VAL GLY PHE ILE ASP TYR ILE SEQRES 25 A 349 VAL HIS PRO LEU TRP GLU THR TRP ALA ASP LEU VAL HIS SEQRES 26 A 349 PRO ASP ALA GLN ASP ILE LEU ASP THR LEU GLU ASP ASN SEQRES 27 A 349 ARG GLU TRP TYR GLN SER THR ILE PRO GLN SER SEQRES 1 B 349 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 349 LEU VAL PRO ARG GLY SER HIS MET THR GLU GLN GLU ASP SEQRES 3 B 349 VAL LEU ALA LYS GLU LEU GLU ASP VAL ASN LYS TRP GLY SEQRES 4 B 349 LEU HIS VAL PHE ARG ILE ALA GLU LEU SER GLY ASN ARG SEQRES 5 B 349 PRO LEU THR VAL ILE MET HIS THR ILE PHE GLN GLU ARG SEQRES 6 B 349 ASP LEU LEU LYS THR PHE LYS ILE PRO VAL ASP THR LEU SEQRES 7 B 349 ILE THR TYR LEU MET THR LEU GLU ASP HIS TYR HIS ALA SEQRES 8 B 349 ASP VAL ALA TYR HIS ASN ASN ILE HIS ALA ALA ASP VAL SEQRES 9 B 349 VAL GLN SER THR HIS VAL LEU LEU SER THR PRO ALA LEU SEQRES 10 B 349 GLU ALA VAL PHE THR ASP LEU GLU ILE LEU ALA ALA ILE SEQRES 11 B 349 PHE ALA SER ALA ILE HIS ASP VAL ASP HIS PRO GLY VAL SEQRES 12 B 349 SER ASN GLN PHE LEU ILE ASN THR ASN SER GLU LEU ALA SEQRES 13 B 349 LEU MET TYR ASN ASP SER SER VAL LEU GLU ASN HIS HIS SEQRES 14 B 349 LEU ALA VAL GLY PHE LYS LEU LEU GLN GLU GLU ASN CYS SEQRES 15 B 349 ASP ILE PHE GLN ASN LEU THR LYS LYS GLN ARG GLN SER SEQRES 16 B 349 LEU ARG LYS MET VAL ILE ASP ILE VAL LEU ALA THR ASP SEQRES 17 B 349 MET SER LYS HIS MET ASN LEU LEU ALA ASP LEU LYS THR SEQRES 18 B 349 MET VAL GLU THR LYS LYS VAL THR SER SER GLY VAL LEU SEQRES 19 B 349 LEU LEU ASP ASN TYR SER ASP ARG ILE GLN VAL LEU GLN SEQRES 20 B 349 ASN MET VAL HIS CYS ALA ASP LEU SER ASN PRO THR LYS SEQRES 21 B 349 PRO LEU GLN LEU TYR ARG GLN TRP THR ASP ARG ILE MET SEQRES 22 B 349 GLU GLU PHE PHE ARG GLN GLY ASP ARG GLU ARG GLU ARG SEQRES 23 B 349 GLY MET GLU ILE SER PRO MET CYS ASP LYS HIS ASN ALA SEQRES 24 B 349 SER VAL GLU LYS SER GLN VAL GLY PHE ILE ASP TYR ILE SEQRES 25 B 349 VAL HIS PRO LEU TRP GLU THR TRP ALA ASP LEU VAL HIS SEQRES 26 B 349 PRO ASP ALA GLN ASP ILE LEU ASP THR LEU GLU ASP ASN SEQRES 27 B 349 ARG GLU TRP TYR GLN SER THR ILE PRO GLN SER HET ZN A 601 1 HET MG A 602 1 HET JN0 A 603 26 HET EDO A 604 4 HET EDO A 605 4 HET ZN B 601 1 HET MG B 602 1 HET JN0 B 603 26 HET EDO B 604 4 HET EDO B 605 4 HET EDO B 606 4 HETNAM ZN ZINC ION HETNAM MG MAGNESIUM ION HETNAM JN0 3-[3-(3-METHYLBUT-2-ENYL)-4,5-BIS(OXIDANYL)PHENYL]-5,7- HETNAM 2 JN0 BIS(OXIDANYL)CHROMEN-4-ONE HETNAM EDO 1,2-ETHANEDIOL HETSYN JN0 GLYCYRRHISOFLAVONE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 ZN 2(ZN 2+) FORMUL 4 MG 2(MG 2+) FORMUL 5 JN0 2(C20 H18 O6) FORMUL 6 EDO 5(C2 H6 O2) FORMUL 14 HOH *243(H2 O) HELIX 1 AA1 GLN A 88 GLU A 97 1 10 HELIX 2 AA2 HIS A 105 SER A 113 1 9 HELIX 3 AA3 ARG A 116 ARG A 129 1 14 HELIX 4 AA4 ASP A 130 LYS A 136 1 7 HELIX 5 AA5 PRO A 138 HIS A 152 1 15 HELIX 6 AA6 ASN A 161 SER A 177 1 17 HELIX 7 AA7 THR A 178 GLU A 182 5 5 HELIX 8 AA8 THR A 186 HIS A 200 1 15 HELIX 9 AA9 SER A 208 THR A 215 1 8 HELIX 10 AB1 SER A 217 ASN A 224 1 8 HELIX 11 AB2 SER A 227 LEU A 240 1 14 HELIX 12 AB3 LEU A 241 GLU A 243 5 3 HELIX 13 AB4 THR A 253 ALA A 270 1 18 HELIX 14 AB5 THR A 271 SER A 274 5 4 HELIX 15 AB6 LYS A 275 THR A 289 1 15 HELIX 16 AB7 ASN A 302 LEU A 319 1 18 HELIX 17 AB8 SER A 320 LYS A 324 5 5 HELIX 18 AB9 PRO A 325 ARG A 350 1 26 HELIX 19 AC1 SER A 364 ILE A 376 1 13 HELIX 20 AC2 ILE A 376 VAL A 388 1 13 HELIX 21 AC3 ALA A 392 THR A 409 1 18 HELIX 22 AC4 GLU B 89 LEU B 96 1 8 HELIX 23 AC5 GLU B 97 VAL B 99 5 3 HELIX 24 AC6 HIS B 105 SER B 113 1 9 HELIX 25 AC7 ARG B 116 ARG B 129 1 14 HELIX 26 AC8 ASP B 130 PHE B 135 1 6 HELIX 27 AC9 PRO B 138 HIS B 152 1 15 HELIX 28 AD1 ASN B 161 SER B 177 1 17 HELIX 29 AD2 THR B 178 GLU B 182 5 5 HELIX 30 AD3 THR B 186 HIS B 200 1 15 HELIX 31 AD4 SER B 208 THR B 215 1 8 HELIX 32 AD5 SER B 217 ASN B 224 1 8 HELIX 33 AD6 SER B 227 LEU B 240 1 14 HELIX 34 AD7 LEU B 241 GLU B 243 5 3 HELIX 35 AD8 THR B 253 ALA B 270 1 18 HELIX 36 AD9 THR B 271 SER B 274 5 4 HELIX 37 AE1 LYS B 275 THR B 289 1 15 HELIX 38 AE2 ASN B 302 LEU B 319 1 18 HELIX 39 AE3 SER B 320 LYS B 324 5 5 HELIX 40 AE4 PRO B 325 GLY B 351 1 27 HELIX 41 AE5 ASP B 359 ALA B 363 5 5 HELIX 42 AE6 SER B 364 ILE B 376 1 13 HELIX 43 AE7 ILE B 376 VAL B 388 1 13 HELIX 44 AE8 ALA B 392 THR B 409 1 18 LINK NE2 HIS A 164 ZN ZN A 601 1555 1555 2.17 LINK NE2 HIS A 200 ZN ZN A 601 1555 1555 2.24 LINK OD2 ASP A 201 ZN ZN A 601 1555 1555 2.17 LINK OD1 ASP A 201 MG MG A 602 1555 1555 2.14 LINK OD1 ASP A 318 ZN ZN A 601 1555 1555 2.19 LINK ZN ZN A 601 O HOH A 714 1555 1555 2.08 LINK ZN ZN A 601 O HOH A 753 1555 1555 2.19 LINK MG MG A 602 O HOH A 705 1555 1555 2.13 LINK MG MG A 602 O HOH A 714 1555 1555 2.14 LINK MG MG A 602 O HOH A 730 1555 1555 2.14 LINK MG MG A 602 O HOH A 773 1555 1555 2.12 LINK MG MG A 602 O HOH A 802 1555 1555 2.21 LINK NE2 HIS B 164 ZN ZN B 601 1555 1555 2.20 LINK NE2 HIS B 200 ZN ZN B 601 1555 1555 2.24 LINK OD2 ASP B 201 ZN ZN B 601 1555 1555 2.21 LINK OD1 ASP B 201 MG MG B 602 1555 1555 2.10 LINK OD1 ASP B 318 ZN ZN B 601 1555 1555 2.19 LINK ZN ZN B 601 O HOH B 702 1555 1555 2.10 LINK ZN ZN B 601 O HOH B 752 1555 1555 2.25 LINK MG MG B 602 O HOH B 702 1555 1555 2.10 LINK MG MG B 602 O HOH B 719 1555 1555 2.11 LINK MG MG B 602 O HOH B 720 1555 1555 2.10 LINK MG MG B 602 O HOH B 735 1555 1555 2.10 LINK MG MG B 602 O HOH B 768 1555 1555 2.19 CISPEP 1 HIS A 389 PRO A 390 0 2.91 CRYST1 57.570 80.752 163.143 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017370 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012384 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006130 0.00000