HEADER STRUCTURAL PROTEIN 18-AUG-22 7YV2 TITLE CRYO-EM STRUCTURE OF EXPANDED COXSACKIEVIRUS A16 EMPTY PARTICLE AFTER TITLE 2 INCUBATION WITH 8C4 ANTIBODY COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN VP1; COMPND 3 CHAIN: A; COMPND 4 EC: 3.4.22.29,3.6.1.15,3.4.22.28,2.7.7.48; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CAPSID PROTEIN VP2; COMPND 8 CHAIN: B; COMPND 9 EC: 3.4.22.29,3.6.1.15,3.4.22.28,2.7.7.48; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: CAPSID PROTEIN VP3; COMPND 13 CHAIN: C; COMPND 14 SYNONYM: VP3; COMPND 15 EC: 3.4.22.29,3.6.1.15,3.4.22.28,2.7.7.48; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COXSACKIEVIRUS A16; SOURCE 3 ORGANISM_TAXID: 31704; SOURCE 4 EXPRESSION_SYSTEM: MUS SP.; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 10095; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: COXSACKIEVIRUS A16; SOURCE 8 ORGANISM_TAXID: 31704; SOURCE 9 EXPRESSION_SYSTEM: MUS SP.; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 10095; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: COXSACKIEVIRUS A16; SOURCE 13 ORGANISM_TAXID: 31704; SOURCE 14 EXPRESSION_SYSTEM: MUS SP.; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 10095 KEYWDS COXSACKIEVIRUS A16, CRYO-EM, STRUCTURAL PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR Y.CONG,C.X.LIU REVDAT 3 03-JUL-24 7YV2 1 REMARK REVDAT 2 11-JAN-23 7YV2 1 JRNL REVDAT 1 19-OCT-22 7YV2 0 JRNL AUTH C.ZHANG,C.LIU,J.SHI,Y.WANG,C.XU,X.YE,Q.LIU,X.LI,W.QIAO, JRNL AUTH 2 Y.YIN,Y.CONG,Z.HUANG JRNL TITL MOLECULAR MECHANISM OF ANTIBODY NEUTRALIZATION OF JRNL TITL 2 COXSACKIEVIRUS A16. JRNL REF NAT COMMUN V. 13 7854 2022 JRNL REFN ESSN 2041-1723 JRNL PMID 36543790 JRNL DOI 10.1038/S41467-022-35575-W REMARK 2 REMARK 2 RESOLUTION. 3.36 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.360 REMARK 3 NUMBER OF PARTICLES : 7874 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7YV2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1300031694. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : CRYO-EM STRUCTURE OF EXPANDED REMARK 245 COXSACKIEVIRUS A16 EMPTY REMARK 245 PARTICLE AFTER INCUBATION WITH REMARK 245 8C4 ANTIBODY REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500151 0.808937 0.308983 -176.75755 REMARK 350 BIOMT2 2 -0.808853 0.309017 0.500266 285.94257 REMARK 350 BIOMT3 2 0.309202 -0.500130 0.808866 109.26305 REMARK 350 BIOMT1 3 -0.308621 0.500034 0.809147 -0.09323 REMARK 350 BIOMT2 3 -0.499814 -0.809017 0.309317 571.93507 REMARK 350 BIOMT3 3 0.809283 -0.308961 0.499604 -0.02009 REMARK 350 BIOMT1 4 -0.308621 -0.499814 0.809283 285.84888 REMARK 350 BIOMT2 4 0.500034 -0.809017 -0.308961 462.74558 REMARK 350 BIOMT3 4 0.809147 0.309317 0.499604 -176.82384 REMARK 350 BIOMT1 5 0.500151 -0.808853 0.309202 285.90650 REMARK 350 BIOMT2 5 0.808937 0.309017 -0.500130 109.27027 REMARK 350 BIOMT3 5 0.308983 0.500266 0.808866 -176.81142 REMARK 350 BIOMT1 6 0.309431 0.500174 0.808751 -176.82061 REMARK 350 BIOMT2 6 0.500174 -0.808944 0.308926 285.96843 REMARK 350 BIOMT3 6 0.808751 0.308926 -0.500486 109.42825 REMARK 350 BIOMT1 7 0.000262 0.000392 1.000000 -0.12703 REMARK 350 BIOMT2 7 1.000000 0.000129 -0.000263 0.00142 REMARK 350 BIOMT3 7 -0.000129 1.000000 -0.000391 0.12569 REMARK 350 BIOMT1 8 0.309017 -0.499797 0.809143 109.20158 REMARK 350 BIOMT2 8 0.499966 0.809108 0.308835 -176.74790 REMARK 350 BIOMT3 8 -0.809038 0.309108 0.499909 286.04828 REMARK 350 BIOMT1 9 0.809006 -0.309147 0.499938 0.07679 REMARK 350 BIOMT2 9 -0.308898 0.500011 0.809055 -0.01799 REMARK 350 BIOMT3 9 -0.500091 -0.808961 0.309017 572.06073 REMARK 350 BIOMT1 10 0.809261 0.308869 0.499696 -176.69464 REMARK 350 BIOMT2 10 -0.308769 -0.500000 0.809112 285.95643 REMARK 350 BIOMT3 10 0.499757 -0.809073 -0.309261 462.90354 REMARK 350 BIOMT1 11 -0.809250 0.308751 -0.499786 572.18501 REMARK 350 BIOMT2 11 0.308751 -0.500249 -0.808965 572.15050 REMARK 350 BIOMT3 11 -0.499786 -0.808965 0.309499 571.83672 REMARK 350 BIOMT1 12 -0.809017 -0.309265 -0.499847 748.90305 REMARK 350 BIOMT2 12 0.308916 0.499762 -0.809202 286.14399 REMARK 350 BIOMT3 12 0.500062 -0.809069 -0.308779 462.67718 REMARK 350 BIOMT1 13 -0.309035 -0.500023 -0.808996 748.85615 REMARK 350 BIOMT2 13 -0.499937 0.809035 -0.309073 286.02806 REMARK 350 BIOMT3 13 0.809049 0.308932 -0.500000 109.20189 REMARK 350 BIOMT1 14 -0.000262 0.000098 -1.000000 572.10911 REMARK 350 BIOMT2 14 -1.000000 0.000165 0.000262 571.96293 REMARK 350 BIOMT3 14 0.000165 1.000000 0.000097 -0.09832 REMARK 350 BIOMT1 15 -0.309413 0.499948 -0.808898 462.92034 REMARK 350 BIOMT2 15 -0.500203 -0.809017 -0.308688 748.79632 REMARK 350 BIOMT3 15 -0.808740 0.309102 0.500396 285.82573 REMARK 350 BIOMT1 16 -0.500180 -0.808926 -0.308965 748.87950 REMARK 350 BIOMT2 16 -0.808926 0.309193 0.500039 285.97794 REMARK 350 BIOMT3 16 -0.308965 0.500039 -0.809013 462.73890 REMARK 350 BIOMT1 17 0.308603 -0.500063 -0.809136 572.22543 REMARK 350 BIOMT2 17 -0.500063 -0.808908 0.309199 572.00889 REMARK 350 BIOMT3 17 -0.809136 0.309199 -0.499695 571.93795 REMARK 350 BIOMT1 18 0.308639 0.499785 -0.809294 286.27940 REMARK 350 BIOMT2 18 0.499785 -0.809126 -0.309079 462.88165 REMARK 350 BIOMT3 18 -0.809294 -0.309079 -0.499513 748.77380 REMARK 350 BIOMT1 19 -0.500122 0.808864 -0.309220 286.20912 REMARK 350 BIOMT2 19 0.808864 0.308841 -0.500357 109.40635 REMARK 350 BIOMT3 19 -0.309220 -0.500357 -0.808719 748.86531 REMARK 350 BIOMT1 20 -1.000000 0.000036 0.000000 572.11170 REMARK 350 BIOMT2 20 0.000036 1.000000 -0.000294 0.07385 REMARK 350 BIOMT3 20 0.000000 -0.000294 -1.000000 572.08602 REMARK 350 BIOMT1 21 0.000227 -0.000098 1.000000 0.02309 REMARK 350 BIOMT2 21 -1.000000 -0.000129 0.000227 572.05729 REMARK 350 BIOMT3 21 0.000129 -1.000000 -0.000098 572.01617 REMARK 350 BIOMT1 22 0.309395 -0.499977 0.808887 109.21819 REMARK 350 BIOMT2 22 -0.499977 -0.809090 -0.308864 748.80269 REMARK 350 BIOMT3 22 0.808887 -0.308864 -0.500305 286.04014 REMARK 350 BIOMT1 23 0.809261 -0.308769 0.499757 -0.05281 REMARK 350 BIOMT2 23 0.308869 -0.500000 -0.809073 572.07670 REMARK 350 BIOMT3 23 0.499696 0.809112 -0.309261 0.08110 REMARK 350 BIOMT1 24 0.809028 0.309283 0.499818 -176.78110 REMARK 350 BIOMT2 24 0.308740 0.499989 -0.809130 286.10863 REMARK 350 BIOMT3 24 -0.500153 0.808922 0.309017 109.32473 REMARK 350 BIOMT1 25 0.309017 0.500052 0.808985 -176.73420 REMARK 350 BIOMT2 25 -0.500186 0.808926 -0.308955 286.09663 REMARK 350 BIOMT3 25 -0.808902 -0.309170 0.500091 462.80004 REMARK 350 BIOMT1 26 0.808772 0.309118 -0.500333 109.38337 REMARK 350 BIOMT2 26 -0.309312 -0.500000 -0.808904 748.86578 REMARK 350 BIOMT3 26 -0.500213 0.808978 -0.308772 286.01426 REMARK 350 BIOMT1 27 -0.000227 1.000000 -0.000165 0.14875 REMARK 350 BIOMT2 27 -0.000392 -0.000165 -1.000000 572.18434 REMARK 350 BIOMT3 27 -1.000000 -0.000227 0.000392 572.01472 REMARK 350 BIOMT1 28 -0.809017 0.308916 0.500062 286.11335 REMARK 350 BIOMT2 28 -0.309265 0.499762 -0.809069 462.94334 REMARK 350 BIOMT3 28 -0.499847 -0.809202 -0.308779 748.75026 REMARK 350 BIOMT1 29 -0.499878 -0.809079 0.309051 572.08382 REMARK 350 BIOMT2 29 -0.809079 0.308899 -0.499972 572.11013 REMARK 350 BIOMT3 29 0.309051 -0.499972 -0.809021 571.97837 REMARK 350 BIOMT1 30 0.499971 -0.808955 -0.309227 462.85869 REMARK 350 BIOMT2 30 -0.809108 -0.308988 -0.499870 748.81991 REMARK 350 BIOMT3 30 0.308825 0.500119 -0.809017 285.99179 REMARK 350 BIOMT1 31 -0.500000 -0.808846 0.309465 571.93365 REMARK 350 BIOMT2 31 0.809097 -0.308870 0.499961 -0.07196 REMARK 350 BIOMT3 31 -0.308807 0.500368 0.808870 -0.11628 REMARK 350 BIOMT1 32 0.499849 -0.809188 -0.308813 462.84205 REMARK 350 BIOMT2 32 0.809090 0.309017 0.499881 -176.77783 REMARK 350 BIOMT3 32 -0.309069 -0.499723 0.809168 285.92368 REMARK 350 BIOMT1 33 0.809028 0.308740 -0.500153 109.36677 REMARK 350 BIOMT2 33 0.309283 0.499989 0.808922 -176.81100 REMARK 350 BIOMT3 33 0.499818 -0.809130 0.309017 286.07408 REMARK 350 BIOMT1 34 0.000262 1.000000 -0.000129 -0.00137 REMARK 350 BIOMT2 34 0.000392 0.000129 1.000000 -0.12564 REMARK 350 BIOMT3 34 1.000000 -0.000262 -0.000391 0.12708 REMARK 350 BIOMT1 35 -0.808761 0.309294 0.500242 285.88068 REMARK 350 BIOMT2 35 0.309294 -0.499773 0.809051 109.10510 REMARK 350 BIOMT3 35 0.500242 0.809051 0.308535 -176.74830 REMARK 350 BIOMT1 36 -0.308999 0.499826 -0.809132 462.90379 REMARK 350 BIOMT2 36 0.500215 0.808999 0.308717 -176.75424 REMARK 350 BIOMT3 36 0.808891 -0.309346 -0.500000 286.08972 REMARK 350 BIOMT1 37 -0.809017 0.309165 -0.499909 572.03491 REMARK 350 BIOMT2 37 -0.308722 0.500238 0.808983 -0.11234 REMARK 350 BIOMT3 37 0.500182 0.808813 -0.309255 0.02532 REMARK 350 BIOMT1 38 -0.809273 -0.308887 -0.499667 748.81659 REMARK 350 BIOMT2 38 -0.308887 -0.499751 0.809220 285.88783 REMARK 350 BIOMT3 38 -0.499667 0.809220 0.309024 109.09842 REMARK 350 BIOMT1 39 -0.309413 -0.500203 -0.808740 748.94256 REMARK 350 BIOMT2 39 0.499948 -0.809017 0.309102 286.00375 REMARK 350 BIOMT3 39 -0.808898 -0.308688 0.500396 462.57370 REMARK 350 BIOMT1 40 -0.000227 -0.000392 -1.000000 572.23873 REMARK 350 BIOMT2 40 1.000000 -0.000165 -0.000227 0.07523 REMARK 350 BIOMT3 40 -0.000165 -1.000000 0.000392 571.96033 REMARK 350 BIOMT1 41 0.000227 -1.000000 0.000129 571.98346 REMARK 350 BIOMT2 41 -0.000098 -0.000129 -1.000000 572.08999 REMARK 350 BIOMT3 41 1.000000 0.000227 -0.000098 -0.09691 REMARK 350 BIOMT1 42 0.809006 -0.308898 -0.500091 286.01494 REMARK 350 BIOMT2 42 -0.309147 0.500011 -0.808961 462.80728 REMARK 350 BIOMT3 42 0.499938 0.809056 0.309017 -176.80032 REMARK 350 BIOMT1 43 0.499849 0.809090 -0.309069 0.04838 REMARK 350 BIOMT2 43 -0.809188 0.309017 -0.499723 572.03628 REMARK 350 BIOMT3 43 -0.308813 0.499881 0.809168 -0.06054 REMARK 350 BIOMT1 44 -0.500000 0.808944 0.309209 109.27985 REMARK 350 BIOMT2 44 -0.809181 -0.309164 -0.499643 748.82623 REMARK 350 BIOMT3 44 -0.308587 -0.500028 0.809164 285.87407 REMARK 350 BIOMT1 45 -0.808783 -0.309136 0.500304 462.75516 REMARK 350 BIOMT2 45 -0.309136 -0.500227 -0.808831 748.85942 REMARK 350 BIOMT3 45 0.500304 -0.808831 0.309010 285.85159 REMARK 350 BIOMT1 46 -0.500000 0.809097 -0.308807 285.98909 REMARK 350 BIOMT2 46 -0.808846 -0.308870 0.500368 462.64208 REMARK 350 BIOMT3 46 0.309465 0.499961 0.808870 -176.86339 REMARK 350 BIOMT1 47 -1.000000 0.000000 0.000489 571.98202 REMARK 350 BIOMT2 47 0.000000 -1.000000 0.000294 571.96431 REMARK 350 BIOMT3 47 0.000489 0.000294 1.000000 -0.22395 REMARK 350 BIOMT1 48 -0.500000 -0.809181 -0.308587 748.79301 REMARK 350 BIOMT2 48 0.808944 -0.309164 -0.500028 286.05387 REMARK 350 BIOMT3 48 0.309209 -0.499643 0.809164 109.03671 REMARK 350 BIOMT1 49 0.309017 -0.500186 -0.808902 572.07528 REMARK 350 BIOMT2 49 0.500052 0.808926 -0.309170 0.02927 REMARK 350 BIOMT3 49 0.808985 -0.308955 0.500091 -0.07593 REMARK 350 BIOMT1 50 0.309017 0.499966 -0.809038 286.04673 REMARK 350 BIOMT2 50 -0.499797 0.809108 0.309108 109.16678 REMARK 350 BIOMT3 50 0.809143 0.308835 0.499909 -176.77191 REMARK 350 BIOMT1 51 -0.308999 0.500215 0.808891 0.03642 REMARK 350 BIOMT2 51 0.499826 0.808999 -0.309346 0.12364 REMARK 350 BIOMT3 51 -0.809132 0.308717 -0.500000 572.16194 REMARK 350 BIOMT1 52 -0.309035 -0.499937 0.809049 286.06889 REMARK 350 BIOMT2 52 -0.500023 0.809035 0.308932 109.30286 REMARK 350 BIOMT3 52 -0.808996 -0.309073 -0.500000 748.82582 REMARK 350 BIOMT1 53 0.499971 -0.809108 0.308825 286.13919 REMARK 350 BIOMT2 53 -0.808955 -0.308988 0.500119 462.77817 REMARK 350 BIOMT3 53 -0.309227 -0.499870 -0.809017 748.81338 REMARK 350 BIOMT1 54 1.000000 -0.000036 -0.000489 0.15018 REMARK 350 BIOMT2 54 -0.000036 -1.000000 0.000000 572.05871 REMARK 350 BIOMT3 54 -0.000489 0.000000 -1.000000 572.14180 REMARK 350 BIOMT1 55 0.500029 0.809170 0.308569 -176.67106 REMARK 350 BIOMT2 55 0.808835 -0.309046 -0.500277 286.12249 REMARK 350 BIOMT3 55 -0.309447 0.499734 -0.809017 462.96520 REMARK 350 BIOMT1 56 0.808772 -0.309312 -0.500213 286.23493 REMARK 350 BIOMT2 56 0.309118 -0.500000 0.808978 109.24116 REMARK 350 BIOMT3 56 -0.500333 -0.808904 -0.308772 748.80223 REMARK 350 BIOMT1 57 0.500029 0.808835 -0.309447 0.17805 REMARK 350 BIOMT2 57 0.809170 -0.309046 0.499734 0.02242 REMARK 350 BIOMT3 57 0.308569 -0.500277 -0.809017 572.20232 REMARK 350 BIOMT1 58 -0.499820 0.809199 0.308831 109.26331 REMARK 350 BIOMT2 58 0.809199 0.309135 0.499632 -176.77145 REMARK 350 BIOMT3 58 0.308831 0.499632 -0.809315 286.21432 REMARK 350 BIOMT1 59 -0.809017 -0.308722 0.500182 462.73860 REMARK 350 BIOMT2 59 0.309165 0.500238 0.808813 -176.81733 REMARK 350 BIOMT3 59 -0.499909 0.808983 -0.309255 286.06393 REMARK 350 BIOMT1 60 -0.000262 -1.000000 0.000165 572.11307 REMARK 350 BIOMT2 60 0.000098 0.000165 1.000000 -0.05182 REMARK 350 BIOMT3 60 -1.000000 0.000262 0.000097 571.95898 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 ASP A 2 REMARK 465 PRO A 3 REMARK 465 ILE A 4 REMARK 465 ALA A 5 REMARK 465 ASP A 6 REMARK 465 MET A 7 REMARK 465 ILE A 8 REMARK 465 ASP A 9 REMARK 465 GLN A 10 REMARK 465 THR A 11 REMARK 465 VAL A 12 REMARK 465 ASN A 13 REMARK 465 ASN A 14 REMARK 465 GLN A 15 REMARK 465 VAL A 16 REMARK 465 ASN A 17 REMARK 465 ARG A 18 REMARK 465 SER A 19 REMARK 465 LEU A 20 REMARK 465 THR A 21 REMARK 465 ALA A 22 REMARK 465 LEU A 23 REMARK 465 GLN A 24 REMARK 465 VAL A 25 REMARK 465 LEU A 26 REMARK 465 PRO A 27 REMARK 465 THR A 28 REMARK 465 ALA A 29 REMARK 465 ALA A 30 REMARK 465 ASN A 31 REMARK 465 THR A 32 REMARK 465 GLU A 33 REMARK 465 ALA A 34 REMARK 465 SER A 35 REMARK 465 SER A 36 REMARK 465 HIS A 37 REMARK 465 ARG A 38 REMARK 465 LEU A 39 REMARK 465 GLY A 40 REMARK 465 THR A 41 REMARK 465 GLY A 42 REMARK 465 VAL A 43 REMARK 465 VAL A 44 REMARK 465 PRO A 45 REMARK 465 ALA A 46 REMARK 465 LEU A 47 REMARK 465 GLN A 48 REMARK 465 ALA A 49 REMARK 465 ALA A 50 REMARK 465 GLU A 51 REMARK 465 THR A 52 REMARK 465 GLY A 53 REMARK 465 ALA A 54 REMARK 465 SER A 55 REMARK 465 SER A 56 REMARK 465 ASN A 57 REMARK 465 ALA A 58 REMARK 465 SER A 59 REMARK 465 ASP A 60 REMARK 465 LYS A 61 REMARK 465 ASN A 62 REMARK 465 LEU A 63 REMARK 465 ILE A 64 REMARK 465 GLU A 65 REMARK 465 THR A 66 REMARK 465 ARG A 67 REMARK 465 CYS A 68 REMARK 465 VAL A 69 REMARK 465 LEU A 70 REMARK 465 ASN A 71 REMARK 465 HIS A 72 REMARK 465 MET A 98 REMARK 465 GLY A 99 REMARK 465 THR A 100 REMARK 465 GLN A 101 REMARK 465 ASN A 102 REMARK 465 THR A 103 REMARK 465 ASP A 206 REMARK 465 GLY A 207 REMARK 465 TYR A 208 REMARK 465 PRO A 209 REMARK 465 THR A 210 REMARK 465 PHE A 211 REMARK 465 GLY A 212 REMARK 465 GLU A 213 REMARK 465 HIS A 214 REMARK 465 LEU A 215 REMARK 465 GLN A 216 REMARK 465 ALA A 217 REMARK 465 ASN A 218 REMARK 465 ASP A 219 REMARK 465 LEU A 220 REMARK 465 ASP A 221 REMARK 465 TYR A 222 REMARK 465 GLY A 223 REMARK 465 GLN A 224 REMARK 465 CYS A 225 REMARK 465 PRO A 226 REMARK 465 ASN A 227 REMARK 465 SER B 1 REMARK 465 PRO B 2 REMARK 465 SER B 3 REMARK 465 ALA B 4 REMARK 465 GLU B 5 REMARK 465 ALA B 6 REMARK 465 CYS B 7 REMARK 465 GLY B 8 REMARK 465 TYR B 9 REMARK 465 SER B 10 REMARK 465 ASP B 11 REMARK 465 ARG B 12 REMARK 465 VAL B 13 REMARK 465 ALA B 14 REMARK 465 GLN B 15 REMARK 465 LEU B 16 REMARK 465 THR B 17 REMARK 465 ILE B 18 REMARK 465 GLY B 19 REMARK 465 ASN B 20 REMARK 465 SER B 21 REMARK 465 THR B 22 REMARK 465 ILE B 23 REMARK 465 THR B 24 REMARK 465 THR B 25 REMARK 465 GLN B 26 REMARK 465 GLU B 27 REMARK 465 ALA B 28 REMARK 465 ALA B 29 REMARK 465 TRP B 38 REMARK 465 PRO B 39 REMARK 465 GLU B 40 REMARK 465 TYR B 41 REMARK 465 CYS B 42 REMARK 465 PRO B 43 REMARK 465 ASP B 44 REMARK 465 THR B 45 REMARK 465 ASP B 46 REMARK 465 ALA B 47 REMARK 465 THR B 48 REMARK 465 ALA B 49 REMARK 465 VAL B 50 REMARK 465 ASP B 51 REMARK 465 LYS B 52 REMARK 465 PRO B 53 REMARK 465 THR B 54 REMARK 465 ARG B 55 REMARK 465 PRO B 56 REMARK 465 ASP B 57 REMARK 465 VAL B 58 REMARK 465 SER B 59 REMARK 465 VAL B 60 REMARK 465 ASN B 61 REMARK 465 VAL B 91 REMARK 465 PHE B 92 REMARK 465 GLY B 93 REMARK 465 GLN B 94 REMARK 465 ASN B 95 REMARK 465 ALA B 96 REMARK 465 GLN B 97 REMARK 465 PHE B 98 REMARK 465 HIS B 99 REMARK 465 TYR B 100 REMARK 465 LEU B 101 REMARK 465 ALA B 136 REMARK 465 GLY B 137 REMARK 465 GLY B 138 REMARK 465 THR B 139 REMARK 465 GLY B 140 REMARK 465 ASN B 141 REMARK 465 GLU B 142 REMARK 465 ASN B 143 REMARK 465 SER B 144 REMARK 465 HIS B 145 REMARK 465 PRO B 146 REMARK 465 PRO B 147 REMARK 465 TYR B 148 REMARK 465 ALA B 149 REMARK 465 THR B 150 REMARK 465 THR B 151 REMARK 465 GLN B 152 REMARK 465 PRO B 153 REMARK 465 GLY B 154 REMARK 465 SER B 205 REMARK 465 ALA B 206 REMARK 465 LEU B 207 REMARK 465 ASN B 208 REMARK 465 HIS B 209 REMARK 465 PHE B 245 REMARK 465 ALA B 246 REMARK 465 GLY B 247 REMARK 465 LEU B 248 REMARK 465 ARG B 249 REMARK 465 GLN B 250 REMARK 465 ALA B 251 REMARK 465 VAL B 252 REMARK 465 LYS B 253 REMARK 465 GLN B 254 REMARK 465 HIS C 176 REMARK 465 TYR C 177 REMARK 465 ARG C 178 REMARK 465 ALA C 179 REMARK 465 HIS C 180 REMARK 465 ALA C 181 REMARK 465 ARG C 182 REMARK 465 ALA C 183 REMARK 465 GLY C 184 REMARK 465 TYR C 185 REMARK 465 PHE C 186 REMARK 465 ASP C 187 REMARK 465 TYR C 188 REMARK 465 GLU C 233 REMARK 465 ASP C 234 REMARK 465 ILE C 235 REMARK 465 GLU C 236 REMARK 465 GLN C 237 REMARK 465 THR C 238 REMARK 465 ALA C 239 REMARK 465 ASN C 240 REMARK 465 ILE C 241 REMARK 465 GLN C 242 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 86 70.07 50.21 REMARK 500 ILE A 262 79.20 55.36 REMARK 500 PRO B 83 36.17 -98.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-34118 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF EXPANDED COXSACKIEVIRUS A16 EMPTY PARTICLE REMARK 900 AFTER INCUBATION WITH 8C4 ANTIBODY DBREF 7YV2 A 1 297 UNP M4TAU2 M4TAU2_9ENTO 566 862 DBREF 7YV2 B 1 254 UNP A9LXZ4 A9LXZ4_9ENTO 70 323 DBREF 7YV2 C 1 242 UNP A9LXZ4 A9LXZ4_9ENTO 324 565 SEQRES 1 A 297 GLY ASP PRO ILE ALA ASP MET ILE ASP GLN THR VAL ASN SEQRES 2 A 297 ASN GLN VAL ASN ARG SER LEU THR ALA LEU GLN VAL LEU SEQRES 3 A 297 PRO THR ALA ALA ASN THR GLU ALA SER SER HIS ARG LEU SEQRES 4 A 297 GLY THR GLY VAL VAL PRO ALA LEU GLN ALA ALA GLU THR SEQRES 5 A 297 GLY ALA SER SER ASN ALA SER ASP LYS ASN LEU ILE GLU SEQRES 6 A 297 THR ARG CYS VAL LEU ASN HIS HIS SER THR GLN GLU THR SEQRES 7 A 297 ALA ILE GLY ASN PHE PHE SER ARG ALA GLY LEU VAL SER SEQRES 8 A 297 ILE ILE THR MET PRO THR MET GLY THR GLN ASN THR ASP SEQRES 9 A 297 GLY TYR ALA ASN TRP ASP ILE ASP LEU MET GLY TYR ALA SEQRES 10 A 297 GLN LEU ARG ARG LYS CYS GLU LEU PHE THR TYR MET ARG SEQRES 11 A 297 PHE ASP ALA GLU PHE THR PHE VAL VAL ALA LYS PRO ASN SEQRES 12 A 297 GLY GLU LEU VAL PRO GLN LEU LEU GLN TYR MET TYR VAL SEQRES 13 A 297 PRO PRO GLY ALA PRO LYS PRO THR SER ARG ASP SER PHE SEQRES 14 A 297 ALA TRP GLN THR ALA THR ASN PRO SER VAL PHE VAL LYS SEQRES 15 A 297 MET THR ASP PRO PRO ALA GLN VAL SER VAL PRO PHE MET SEQRES 16 A 297 SER PRO ALA SER ALA TYR GLN TRP PHE TYR ASP GLY TYR SEQRES 17 A 297 PRO THR PHE GLY GLU HIS LEU GLN ALA ASN ASP LEU ASP SEQRES 18 A 297 TYR GLY GLN CYS PRO ASN ASN MET MET GLY THR PHE SER SEQRES 19 A 297 ILE ARG THR VAL GLY THR LYS LYS SER PRO HIS SER ILE SEQRES 20 A 297 THR LEU ARG VAL TYR MET ARG ILE LYS HIS VAL ARG ALA SEQRES 21 A 297 TRP ILE PRO ARG PRO LEU ARG ASN GLN PRO TYR LEU PHE SEQRES 22 A 297 LYS THR ASN PRO ASN TYR LYS GLY ASN ASP ILE LYS CYS SEQRES 23 A 297 THR SER THR SER ARG ASP LYS ILE THR THR LEU SEQRES 1 B 254 SER PRO SER ALA GLU ALA CYS GLY TYR SER ASP ARG VAL SEQRES 2 B 254 ALA GLN LEU THR ILE GLY ASN SER THR ILE THR THR GLN SEQRES 3 B 254 GLU ALA ALA ASN ILE VAL ILE ALA TYR GLY GLU TRP PRO SEQRES 4 B 254 GLU TYR CYS PRO ASP THR ASP ALA THR ALA VAL ASP LYS SEQRES 5 B 254 PRO THR ARG PRO ASP VAL SER VAL ASN ARG PHE PHE THR SEQRES 6 B 254 LEU ASP THR LYS SER TRP ALA LYS ASP SER LYS GLY TRP SEQRES 7 B 254 TYR TRP LYS PHE PRO ASP VAL LEU THR GLU VAL GLY VAL SEQRES 8 B 254 PHE GLY GLN ASN ALA GLN PHE HIS TYR LEU TYR ARG SER SEQRES 9 B 254 GLY PHE CYS VAL HIS VAL GLN CYS ASN ALA SER LYS PHE SEQRES 10 B 254 HIS GLN GLY ALA LEU LEU VAL ALA VAL LEU PRO GLU TYR SEQRES 11 B 254 VAL LEU GLY THR ILE ALA GLY GLY THR GLY ASN GLU ASN SEQRES 12 B 254 SER HIS PRO PRO TYR ALA THR THR GLN PRO GLY GLN VAL SEQRES 13 B 254 GLY ALA VAL LEU THR HIS PRO TYR VAL LEU ASP ALA GLY SEQRES 14 B 254 ILE PRO LEU SER GLN LEU THR VAL CYS PRO HIS GLN TRP SEQRES 15 B 254 ILE ASN LEU ARG THR ASN ASN CYS ALA THR ILE ILE VAL SEQRES 16 B 254 PRO TYR MET ASN THR VAL PRO PHE ASP SER ALA LEU ASN SEQRES 17 B 254 HIS CYS ASN PHE GLY LEU LEU VAL ILE PRO VAL VAL PRO SEQRES 18 B 254 LEU ASP PHE ASN ALA GLY ALA THR SER GLU ILE PRO ILE SEQRES 19 B 254 THR VAL THR ILE ALA PRO MET CYS ALA GLU PHE ALA GLY SEQRES 20 B 254 LEU ARG GLN ALA VAL LYS GLN SEQRES 1 C 242 GLY ILE PRO THR GLU LEU LYS PRO GLY THR ASN GLN PHE SEQRES 2 C 242 LEU THR THR ASP ASP GLY VAL SER ALA PRO ILE LEU PRO SEQRES 3 C 242 GLY PHE HIS PRO THR PRO PRO ILE HIS ILE PRO GLY GLU SEQRES 4 C 242 VAL ARG ASN LEU LEU GLU ILE CYS ARG VAL GLU THR ILE SEQRES 5 C 242 LEU GLU VAL ASN ASN LEU LYS THR ASN GLU THR THR PRO SEQRES 6 C 242 MET GLN ARG LEU CYS PHE PRO VAL SER VAL GLN SER LYS SEQRES 7 C 242 THR GLY GLU LEU CYS ALA ALA PHE ARG ALA ASP PRO GLY SEQRES 8 C 242 ARG ASP GLY PRO TRP GLN SER THR ILE LEU GLY GLN LEU SEQRES 9 C 242 CYS ARG TYR TYR THR GLN TRP SER GLY SER LEU GLU VAL SEQRES 10 C 242 THR PHE MET PHE ALA GLY SER PHE MET ALA THR GLY LYS SEQRES 11 C 242 MET LEU ILE ALA TYR THR PRO PRO GLY GLY SER VAL PRO SEQRES 12 C 242 ALA ASP ARG ILE THR ALA MET LEU GLY THR HIS VAL ILE SEQRES 13 C 242 TRP ASP PHE GLY LEU GLN SER SER VAL THR LEU VAL VAL SEQRES 14 C 242 PRO TRP ILE SER ASN THR HIS TYR ARG ALA HIS ALA ARG SEQRES 15 C 242 ALA GLY TYR PHE ASP TYR TYR THR THR GLY ILE ILE THR SEQRES 16 C 242 ILE TRP TYR GLN THR ASN TYR VAL VAL PRO ILE GLY ALA SEQRES 17 C 242 PRO THR THR ALA TYR ILE VAL ALA LEU ALA ALA ALA GLN SEQRES 18 C 242 ASP ASN PHE THR MET LYS LEU CYS LYS ASP THR GLU ASP SEQRES 19 C 242 ILE GLU GLN THR ALA ASN ILE GLN HELIX 1 AA1 GLY A 81 SER A 85 5 5 HELIX 2 AA2 SER A 168 THR A 173 5 6 HELIX 3 AA3 TYR B 35 GLU B 37 5 3 HELIX 4 AA4 PRO B 83 THR B 87 5 5 HELIX 5 AA5 GLN B 174 CYS B 178 5 5 HELIX 6 AA6 ASN C 42 ILE C 46 5 5 HELIX 7 AA7 THR C 64 CYS C 70 5 7 HELIX 8 AA8 GLY C 94 SER C 98 5 5 HELIX 9 AA9 ILE C 100 CYS C 105 1 6 HELIX 10 AB1 ASP C 145 LEU C 151 1 7 SHEET 1 AA1 5 GLY A 88 MET A 95 0 SHEET 2 AA1 5 ILE A 247 TRP A 261 -1 O ILE A 247 N MET A 95 SHEET 3 AA1 5 TYR A 128 ALA A 140 -1 N GLU A 134 O ARG A 254 SHEET 4 AA1 5 GLN A 189 VAL A 192 -1 O VAL A 190 N PHE A 135 SHEET 5 AA1 5 ALA C 22 PRO C 23 1 O ALA C 22 N SER A 191 SHEET 1 AA2 4 TYR A 201 GLN A 202 0 SHEET 2 AA2 4 TYR A 128 ALA A 140 -1 N MET A 129 O TYR A 201 SHEET 3 AA2 4 ILE A 247 TRP A 261 -1 O ARG A 254 N GLU A 134 SHEET 4 AA2 4 GLU C 39 VAL C 40 -1 O VAL C 40 N ALA A 260 SHEET 1 AA3 4 TYR A 106 ASP A 110 0 SHEET 2 AA3 4 THR A 232 THR A 237 -1 O PHE A 233 N TRP A 109 SHEET 3 AA3 4 LEU A 151 VAL A 156 -1 N MET A 154 O SER A 234 SHEET 4 AA3 4 SER A 178 VAL A 179 -1 O VAL A 179 N TYR A 153 SHEET 1 AA4 5 VAL B 32 ILE B 33 0 SHEET 2 AA4 5 CYS B 190 VAL B 195 1 O ILE B 194 N VAL B 32 SHEET 3 AA4 5 ARG B 103 CYS B 112 -1 N VAL B 110 O ALA B 191 SHEET 4 AA4 5 ILE B 232 GLU B 244 -1 O GLU B 244 N ARG B 103 SHEET 5 AA4 5 PHE B 64 TRP B 71 -1 N TRP B 71 O ILE B 232 SHEET 1 AA5 5 ALA B 158 VAL B 159 0 SHEET 2 AA5 5 TRP B 78 LYS B 81 -1 N TYR B 79 O ALA B 158 SHEET 3 AA5 5 PHE B 212 ASP B 223 -1 O VAL B 216 N TRP B 78 SHEET 4 AA5 5 GLN B 119 PRO B 128 -1 N ALA B 125 O LEU B 215 SHEET 5 AA5 5 HIS B 180 ASN B 184 -1 O ILE B 183 N LEU B 122 SHEET 1 AA6 4 THR C 51 ILE C 52 0 SHEET 2 AA6 4 ALA C 212 ALA C 220 -1 O ALA C 218 N THR C 51 SHEET 3 AA6 4 TYR C 108 PHE C 121 -1 N THR C 118 O LEU C 217 SHEET 4 AA6 4 THR C 166 ASN C 174 -1 O LEU C 167 N VAL C 117 SHEET 1 AA7 4 PHE C 71 VAL C 73 0 SHEET 2 AA7 4 ALA C 212 ALA C 220 -1 O ALA C 212 N VAL C 73 SHEET 3 AA7 4 TYR C 108 PHE C 121 -1 N THR C 118 O LEU C 217 SHEET 4 AA7 4 THR C 225 CYS C 229 -1 O THR C 225 N SER C 112 SHEET 1 AA8 4 LEU C 82 PHE C 86 0 SHEET 2 AA8 4 ILE C 194 TYR C 198 -1 O ILE C 196 N CYS C 83 SHEET 3 AA8 4 MET C 131 TYR C 135 -1 N LEU C 132 O TRP C 197 SHEET 4 AA8 4 THR C 153 TRP C 157 -1 O THR C 153 N TYR C 135 CISPEP 1 PHE B 82 PRO B 83 0 1.04 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000