data_7YYG # _entry.id 7YYG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.373 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7YYG pdb_00007yyg 10.2210/pdb7yyg/pdb WWPDB D_1292120868 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7YYG _pdbx_database_status.recvd_initial_deposition_date 2022-02-17 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Prudnikova, T.' 1 ? 'Kuta Smatanova, I.' 2 ? 'Kamanova, J.' 3 ? 'Bumba, L.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Microbiol Spectr' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2165-0497 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 11 _citation.language ? _citation.page_first e0411222 _citation.page_last e0411222 _citation.title 'BopN is a Gatekeeper of the Bordetella Type III Secretion System.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1128/spectrum.04112-22 _citation.pdbx_database_id_PubMed 37036369 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Navarrete, K.M.' 1 ? primary 'Bumba, L.' 2 0000-0001-6659-5447 primary 'Prudnikova, T.' 3 ? primary 'Malcova, I.' 4 ? primary 'Allsop, T.R.' 5 ? primary 'Sebo, P.' 6 0000-0002-9755-7715 primary 'Kamanova, J.' 7 0000-0001-6574-4404 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7YYG _cell.details ? _cell.formula_units_Z ? _cell.length_a 84.859 _cell.length_a_esd ? _cell.length_b 84.859 _cell.length_b_esd ? _cell.length_c 102.565 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7YYG _symmetry.cell_setting ? _symmetry.Int_Tables_number 93 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Putative outer protein N' 39036.762 1 ? ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 6 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 7 non-polymer syn 'TRIETHYLENE GLYCOL' 150.173 1 ? ? ? ? 8 water nat water 18.015 160 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MTRIDAAPNPFHAAMQGRHDASANTSSGWLQGQRIAPAPTGISLADAAEELSLHMAQAAEEKHHSERKVTAERPMLWLDA AQLAELFSHTHDPDAQAKLEALTAELLRGRGAPMQLAAQAFPGVTQQYLALQHALQRGEHEDAAPHALEALRDALADLEL AHGPEIRAGINTLPTAGAFARSADELAGFQHAYRDIALGQLSLARTLDLVLERYGNDDIHGALGALIQALGHDLAAATPS TDGVRLQVLASDLYQVEVAATVLEECNALKQRLGNAGSQECADAQGLMRDLVGISEDKWIAPARFEKLAERHGANALSER IAFLGGVRQILKDLPTQIYADMDVRATVLAAAQDALDNAIAMENA ; _entity_poly.pdbx_seq_one_letter_code_can ;MTRIDAAPNPFHAAMQGRHDASANTSSGWLQGQRIAPAPTGISLADAAEELSLHMAQAAEEKHHSERKVTAERPMLWLDA AQLAELFSHTHDPDAQAKLEALTAELLRGRGAPMQLAAQAFPGVTQQYLALQHALQRGEHEDAAPHALEALRDALADLEL AHGPEIRAGINTLPTAGAFARSADELAGFQHAYRDIALGQLSLARTLDLVLERYGNDDIHGALGALIQALGHDLAAATPS TDGVRLQVLASDLYQVEVAATVLEECNALKQRLGNAGSQECADAQGLMRDLVGISEDKWIAPARFEKLAERHGANALSER IAFLGGVRQILKDLPTQIYADMDVRATVLAAAQDALDNAIAMENA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 THR n 1 3 ARG n 1 4 ILE n 1 5 ASP n 1 6 ALA n 1 7 ALA n 1 8 PRO n 1 9 ASN n 1 10 PRO n 1 11 PHE n 1 12 HIS n 1 13 ALA n 1 14 ALA n 1 15 MET n 1 16 GLN n 1 17 GLY n 1 18 ARG n 1 19 HIS n 1 20 ASP n 1 21 ALA n 1 22 SER n 1 23 ALA n 1 24 ASN n 1 25 THR n 1 26 SER n 1 27 SER n 1 28 GLY n 1 29 TRP n 1 30 LEU n 1 31 GLN n 1 32 GLY n 1 33 GLN n 1 34 ARG n 1 35 ILE n 1 36 ALA n 1 37 PRO n 1 38 ALA n 1 39 PRO n 1 40 THR n 1 41 GLY n 1 42 ILE n 1 43 SER n 1 44 LEU n 1 45 ALA n 1 46 ASP n 1 47 ALA n 1 48 ALA n 1 49 GLU n 1 50 GLU n 1 51 LEU n 1 52 SER n 1 53 LEU n 1 54 HIS n 1 55 MET n 1 56 ALA n 1 57 GLN n 1 58 ALA n 1 59 ALA n 1 60 GLU n 1 61 GLU n 1 62 LYS n 1 63 HIS n 1 64 HIS n 1 65 SER n 1 66 GLU n 1 67 ARG n 1 68 LYS n 1 69 VAL n 1 70 THR n 1 71 ALA n 1 72 GLU n 1 73 ARG n 1 74 PRO n 1 75 MET n 1 76 LEU n 1 77 TRP n 1 78 LEU n 1 79 ASP n 1 80 ALA n 1 81 ALA n 1 82 GLN n 1 83 LEU n 1 84 ALA n 1 85 GLU n 1 86 LEU n 1 87 PHE n 1 88 SER n 1 89 HIS n 1 90 THR n 1 91 HIS n 1 92 ASP n 1 93 PRO n 1 94 ASP n 1 95 ALA n 1 96 GLN n 1 97 ALA n 1 98 LYS n 1 99 LEU n 1 100 GLU n 1 101 ALA n 1 102 LEU n 1 103 THR n 1 104 ALA n 1 105 GLU n 1 106 LEU n 1 107 LEU n 1 108 ARG n 1 109 GLY n 1 110 ARG n 1 111 GLY n 1 112 ALA n 1 113 PRO n 1 114 MET n 1 115 GLN n 1 116 LEU n 1 117 ALA n 1 118 ALA n 1 119 GLN n 1 120 ALA n 1 121 PHE n 1 122 PRO n 1 123 GLY n 1 124 VAL n 1 125 THR n 1 126 GLN n 1 127 GLN n 1 128 TYR n 1 129 LEU n 1 130 ALA n 1 131 LEU n 1 132 GLN n 1 133 HIS n 1 134 ALA n 1 135 LEU n 1 136 GLN n 1 137 ARG n 1 138 GLY n 1 139 GLU n 1 140 HIS n 1 141 GLU n 1 142 ASP n 1 143 ALA n 1 144 ALA n 1 145 PRO n 1 146 HIS n 1 147 ALA n 1 148 LEU n 1 149 GLU n 1 150 ALA n 1 151 LEU n 1 152 ARG n 1 153 ASP n 1 154 ALA n 1 155 LEU n 1 156 ALA n 1 157 ASP n 1 158 LEU n 1 159 GLU n 1 160 LEU n 1 161 ALA n 1 162 HIS n 1 163 GLY n 1 164 PRO n 1 165 GLU n 1 166 ILE n 1 167 ARG n 1 168 ALA n 1 169 GLY n 1 170 ILE n 1 171 ASN n 1 172 THR n 1 173 LEU n 1 174 PRO n 1 175 THR n 1 176 ALA n 1 177 GLY n 1 178 ALA n 1 179 PHE n 1 180 ALA n 1 181 ARG n 1 182 SER n 1 183 ALA n 1 184 ASP n 1 185 GLU n 1 186 LEU n 1 187 ALA n 1 188 GLY n 1 189 PHE n 1 190 GLN n 1 191 HIS n 1 192 ALA n 1 193 TYR n 1 194 ARG n 1 195 ASP n 1 196 ILE n 1 197 ALA n 1 198 LEU n 1 199 GLY n 1 200 GLN n 1 201 LEU n 1 202 SER n 1 203 LEU n 1 204 ALA n 1 205 ARG n 1 206 THR n 1 207 LEU n 1 208 ASP n 1 209 LEU n 1 210 VAL n 1 211 LEU n 1 212 GLU n 1 213 ARG n 1 214 TYR n 1 215 GLY n 1 216 ASN n 1 217 ASP n 1 218 ASP n 1 219 ILE n 1 220 HIS n 1 221 GLY n 1 222 ALA n 1 223 LEU n 1 224 GLY n 1 225 ALA n 1 226 LEU n 1 227 ILE n 1 228 GLN n 1 229 ALA n 1 230 LEU n 1 231 GLY n 1 232 HIS n 1 233 ASP n 1 234 LEU n 1 235 ALA n 1 236 ALA n 1 237 ALA n 1 238 THR n 1 239 PRO n 1 240 SER n 1 241 THR n 1 242 ASP n 1 243 GLY n 1 244 VAL n 1 245 ARG n 1 246 LEU n 1 247 GLN n 1 248 VAL n 1 249 LEU n 1 250 ALA n 1 251 SER n 1 252 ASP n 1 253 LEU n 1 254 TYR n 1 255 GLN n 1 256 VAL n 1 257 GLU n 1 258 VAL n 1 259 ALA n 1 260 ALA n 1 261 THR n 1 262 VAL n 1 263 LEU n 1 264 GLU n 1 265 GLU n 1 266 CYS n 1 267 ASN n 1 268 ALA n 1 269 LEU n 1 270 LYS n 1 271 GLN n 1 272 ARG n 1 273 LEU n 1 274 GLY n 1 275 ASN n 1 276 ALA n 1 277 GLY n 1 278 SER n 1 279 GLN n 1 280 GLU n 1 281 CYS n 1 282 ALA n 1 283 ASP n 1 284 ALA n 1 285 GLN n 1 286 GLY n 1 287 LEU n 1 288 MET n 1 289 ARG n 1 290 ASP n 1 291 LEU n 1 292 VAL n 1 293 GLY n 1 294 ILE n 1 295 SER n 1 296 GLU n 1 297 ASP n 1 298 LYS n 1 299 TRP n 1 300 ILE n 1 301 ALA n 1 302 PRO n 1 303 ALA n 1 304 ARG n 1 305 PHE n 1 306 GLU n 1 307 LYS n 1 308 LEU n 1 309 ALA n 1 310 GLU n 1 311 ARG n 1 312 HIS n 1 313 GLY n 1 314 ALA n 1 315 ASN n 1 316 ALA n 1 317 LEU n 1 318 SER n 1 319 GLU n 1 320 ARG n 1 321 ILE n 1 322 ALA n 1 323 PHE n 1 324 LEU n 1 325 GLY n 1 326 GLY n 1 327 VAL n 1 328 ARG n 1 329 GLN n 1 330 ILE n 1 331 LEU n 1 332 LYS n 1 333 ASP n 1 334 LEU n 1 335 PRO n 1 336 THR n 1 337 GLN n 1 338 ILE n 1 339 TYR n 1 340 ALA n 1 341 ASP n 1 342 MET n 1 343 ASP n 1 344 VAL n 1 345 ARG n 1 346 ALA n 1 347 THR n 1 348 VAL n 1 349 LEU n 1 350 ALA n 1 351 ALA n 1 352 ALA n 1 353 GLN n 1 354 ASP n 1 355 ALA n 1 356 LEU n 1 357 ASP n 1 358 ASN n 1 359 ALA n 1 360 ILE n 1 361 ALA n 1 362 MET n 1 363 GLU n 1 364 ASN n 1 365 ALA n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 365 _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Bordetella pertussis Tohama I' _entity_src_nat.pdbx_ncbi_taxonomy_id 257313 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain 'Tohama I / ATCC BAA-589 / NCTC 13251' _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q79GQ0_BORPE _struct_ref.pdbx_db_accession Q79GQ0 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTRIDAAPNPFHAAMQGRHDASANTSSGWLQGQRIAPAPTGISLADAAEELSLHMAQAAEEKHHSERKVTAERPMLWLDA AQLAELFSHTHDPDAQAKLEALTAELLRGRGAPMQLAAQAFPGVTQQYLALQHALQRGEHEDAAPHALEALRDALADLEL AHGPEIRAGINTLPTAGAFARSADELAGFQHAYRDIALGQLSLARTLDLVLERYGNDDIHGALGALIQALGHDLAAATPS TDGVRLQVLASDLYQVEVAATVLEECNALKQRLGNAGSQECADAQGLMRDLVGISEDKWIAPARFEKLAERHGANALSER IAFLGGVRQILKDLPTQIYADMDVRATVLAAAQDALDNAIAMENA ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7YYG _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 365 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q79GQ0 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 365 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 365 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PGE non-polymer . 'TRIETHYLENE GLYCOL' ? 'C6 H14 O4' 150.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7YYG _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.14 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 60.81 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.16M Calcium acetate, 0.08M sodium cacodylate, 14.4% (w/v) PEG 8000, 20% (v/v) glycerol' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-12-09 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.987 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'BESSY BEAMLINE 14.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.987 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 14.1 _diffrn_source.pdbx_synchrotron_site BESSY # _reflns.B_iso_Wilson_estimate 36.5 _reflns.entry_id 7YYG _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.95 _reflns.d_resolution_low 43.93 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 26601 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 8.88 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 18.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.10 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.99 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.95 _reflns_shell.d_res_low 2 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.75 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 4088 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.127 _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.73 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] -0.39 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] -0.39 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 0.78 _refine.B_iso_max ? _refine.B_iso_mean 46.007 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.967 _refine.correlation_coeff_Fo_to_Fc_free 0.961 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7YYG _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.95 _refine.ls_d_res_low 43.93 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 26586 _refine.ls_number_reflns_R_free 1400 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.91 _refine.ls_percent_reflns_R_free 5.0 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.18103 _refine.ls_R_factor_R_free 0.20709 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.17968 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'AB INITIO PHASING' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.134 _refine.pdbx_overall_ESU_R_Free 0.123 _refine.pdbx_solvent_vdw_probe_radii 1.00 _refine.pdbx_solvent_ion_probe_radii 0.70 _refine.pdbx_solvent_shrinkage_radii 0.70 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 7.515 _refine.overall_SU_ML 0.103 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.95 _refine_hist.d_res_low 43.93 _refine_hist.number_atoms_solvent 160 _refine_hist.number_atoms_total 2250 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2067 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 23 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 0.017 2268 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 2175 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 0.858 1.878 3091 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.997 2.694 4991 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 3.825 5.000 305 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 27.307 22.154 130 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 12.558 15.000 372 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 11.852 15.000 20 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.046 0.200 347 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 2722 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 522 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 4.779 2.925 1179 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 4.770 2.919 1177 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 5.451 4.354 1497 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 5.449 4.359 1498 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 7.562 3.691 1089 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 7.559 3.697 1090 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 9.685 5.230 1595 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 10.369 37.618 2627 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 10.376 37.157 2589 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.950 _refine_ls_shell.d_res_low 2.000 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 102 _refine_ls_shell.number_reflns_R_work 1933 _refine_ls_shell.percent_reflns_obs 99.85 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.325 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.30 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 7YYG _struct.title 'Crystal structure of gatekeeper of type III secretion system in Bordetella BopN' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7YYG _struct_keywords.text 'The type III secretion system, Whooping cough, Immunosuppressive modulator, Bordetella pertussis, IMMUNOSUPPRESSANT' _struct_keywords.pdbx_keywords IMMUNOSUPPRESSANT # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 8 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ALA A 84 ? HIS A 91 ? ALA A 84 HIS A 91 5 ? 8 HELX_P HELX_P2 AA2 ASP A 94 ? GLY A 109 ? ASP A 94 GLY A 109 1 ? 16 HELX_P HELX_P3 AA3 ALA A 112 ? PHE A 121 ? ALA A 112 PHE A 121 1 ? 10 HELX_P HELX_P4 AA4 GLY A 123 ? ASP A 142 ? GLY A 123 ASP A 142 1 ? 20 HELX_P HELX_P5 AA5 ALA A 144 ? THR A 172 ? ALA A 144 THR A 172 1 ? 29 HELX_P HELX_P6 AA6 THR A 172 ? ALA A 180 ? THR A 172 ALA A 180 1 ? 9 HELX_P HELX_P7 AA7 SER A 182 ? LEU A 198 ? SER A 182 LEU A 198 1 ? 17 HELX_P HELX_P8 AA8 SER A 202 ? GLY A 215 ? SER A 202 GLY A 215 1 ? 14 HELX_P HELX_P9 AA9 ASP A 218 ? ALA A 236 ? ASP A 218 ALA A 236 1 ? 19 HELX_P HELX_P10 AB1 ASP A 242 ? GLU A 264 ? ASP A 242 GLU A 264 1 ? 23 HELX_P HELX_P11 AB2 GLU A 264 ? GLY A 274 ? GLU A 264 GLY A 274 1 ? 11 HELX_P HELX_P12 AB3 ASP A 283 ? SER A 295 ? ASP A 283 SER A 295 1 ? 13 HELX_P HELX_P13 AB4 ALA A 301 ? HIS A 312 ? ALA A 301 HIS A 312 1 ? 12 HELX_P HELX_P14 AB5 ALA A 316 ? LEU A 334 ? ALA A 316 LEU A 334 1 ? 19 HELX_P HELX_P15 AB6 PRO A 335 ? TYR A 339 ? PRO A 335 TYR A 339 5 ? 5 HELX_P HELX_P16 AB7 ASP A 341 ? MET A 362 ? ASP A 341 MET A 362 1 ? 22 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 142 OD2 ? ? ? 1_555 B CA . CA ? ? A ASP 142 A CA 401 1_555 ? ? ? ? ? ? ? 2.383 ? ? metalc2 metalc ? ? A GLN 228 OE1 ? ? ? 1_555 C NA . NA ? ? A GLN 228 A NA 402 1_555 ? ? ? ? ? ? ? 3.112 ? ? metalc3 metalc ? ? A GLN 228 OE1 ? ? ? 1_555 C NA . NA ? ? A GLN 228 A NA 402 5_655 ? ? ? ? ? ? ? 3.113 ? ? metalc4 metalc ? ? A ASP 333 OD1 ? ? ? 1_555 B CA . CA ? ? A ASP 333 A CA 401 4_565 ? ? ? ? ? ? ? 2.402 ? ? metalc5 metalc ? ? A ASP 343 OD1 ? ? ? 1_555 B CA . CA ? ? A ASP 343 A CA 401 3_665 ? ? ? ? ? ? ? 2.496 ? ? metalc6 metalc ? ? A ASP 343 OD2 ? ? ? 1_555 B CA . CA ? ? A ASP 343 A CA 401 3_665 ? ? ? ? ? ? ? 2.671 ? ? metalc7 metalc ? ? B CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 401 A HOH 560 8_664 ? ? ? ? ? ? ? 2.644 ? ? metalc8 metalc ? ? B CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 401 A HOH 582 8_664 ? ? ? ? ? ? ? 2.710 ? ? metalc9 metalc ? ? B CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 401 A HOH 605 3_654 ? ? ? ? ? ? ? 2.450 ? ? metalc10 metalc ? ? C NA . NA ? ? ? 1_555 H HOH . O ? ? A NA 402 A HOH 513 1_555 ? ? ? ? ? ? ? 2.404 ? ? metalc11 metalc ? ? C NA . NA ? ? ? 1_555 H HOH . O ? ? A NA 402 A HOH 513 5_655 ? ? ? ? ? ? ? 2.405 ? ? metalc12 metalc ? ? C NA . NA ? ? ? 1_555 H HOH . O ? ? A NA 402 A HOH 612 1_555 ? ? ? ? ? ? ? 3.155 ? ? metalc13 metalc ? ? C NA . NA ? ? ? 1_555 H HOH . O ? ? A NA 402 A HOH 612 5_655 ? ? ? ? ? ? ? 3.155 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 7YYG _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.011784 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011784 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009750 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CA CL N NA O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 THR 2 2 ? ? ? A . n A 1 3 ARG 3 3 ? ? ? A . n A 1 4 ILE 4 4 ? ? ? A . n A 1 5 ASP 5 5 ? ? ? A . n A 1 6 ALA 6 6 ? ? ? A . n A 1 7 ALA 7 7 ? ? ? A . n A 1 8 PRO 8 8 ? ? ? A . n A 1 9 ASN 9 9 ? ? ? A . n A 1 10 PRO 10 10 ? ? ? A . n A 1 11 PHE 11 11 ? ? ? A . n A 1 12 HIS 12 12 ? ? ? A . n A 1 13 ALA 13 13 ? ? ? A . n A 1 14 ALA 14 14 ? ? ? A . n A 1 15 MET 15 15 ? ? ? A . n A 1 16 GLN 16 16 ? ? ? A . n A 1 17 GLY 17 17 ? ? ? A . n A 1 18 ARG 18 18 ? ? ? A . n A 1 19 HIS 19 19 ? ? ? A . n A 1 20 ASP 20 20 ? ? ? A . n A 1 21 ALA 21 21 ? ? ? A . n A 1 22 SER 22 22 ? ? ? A . n A 1 23 ALA 23 23 ? ? ? A . n A 1 24 ASN 24 24 ? ? ? A . n A 1 25 THR 25 25 ? ? ? A . n A 1 26 SER 26 26 ? ? ? A . n A 1 27 SER 27 27 ? ? ? A . n A 1 28 GLY 28 28 ? ? ? A . n A 1 29 TRP 29 29 ? ? ? A . n A 1 30 LEU 30 30 ? ? ? A . n A 1 31 GLN 31 31 ? ? ? A . n A 1 32 GLY 32 32 ? ? ? A . n A 1 33 GLN 33 33 ? ? ? A . n A 1 34 ARG 34 34 ? ? ? A . n A 1 35 ILE 35 35 ? ? ? A . n A 1 36 ALA 36 36 ? ? ? A . n A 1 37 PRO 37 37 ? ? ? A . n A 1 38 ALA 38 38 ? ? ? A . n A 1 39 PRO 39 39 ? ? ? A . n A 1 40 THR 40 40 ? ? ? A . n A 1 41 GLY 41 41 ? ? ? A . n A 1 42 ILE 42 42 ? ? ? A . n A 1 43 SER 43 43 ? ? ? A . n A 1 44 LEU 44 44 ? ? ? A . n A 1 45 ALA 45 45 ? ? ? A . n A 1 46 ASP 46 46 ? ? ? A . n A 1 47 ALA 47 47 ? ? ? A . n A 1 48 ALA 48 48 ? ? ? A . n A 1 49 GLU 49 49 ? ? ? A . n A 1 50 GLU 50 50 ? ? ? A . n A 1 51 LEU 51 51 ? ? ? A . n A 1 52 SER 52 52 ? ? ? A . n A 1 53 LEU 53 53 ? ? ? A . n A 1 54 HIS 54 54 ? ? ? A . n A 1 55 MET 55 55 ? ? ? A . n A 1 56 ALA 56 56 ? ? ? A . n A 1 57 GLN 57 57 ? ? ? A . n A 1 58 ALA 58 58 ? ? ? A . n A 1 59 ALA 59 59 ? ? ? A . n A 1 60 GLU 60 60 ? ? ? A . n A 1 61 GLU 61 61 ? ? ? A . n A 1 62 LYS 62 62 ? ? ? A . n A 1 63 HIS 63 63 ? ? ? A . n A 1 64 HIS 64 64 ? ? ? A . n A 1 65 SER 65 65 ? ? ? A . n A 1 66 GLU 66 66 ? ? ? A . n A 1 67 ARG 67 67 ? ? ? A . n A 1 68 LYS 68 68 ? ? ? A . n A 1 69 VAL 69 69 ? ? ? A . n A 1 70 THR 70 70 ? ? ? A . n A 1 71 ALA 71 71 ? ? ? A . n A 1 72 GLU 72 72 ? ? ? A . n A 1 73 ARG 73 73 ? ? ? A . n A 1 74 PRO 74 74 ? ? ? A . n A 1 75 MET 75 75 ? ? ? A . n A 1 76 LEU 76 76 ? ? ? A . n A 1 77 TRP 77 77 ? ? ? A . n A 1 78 LEU 78 78 ? ? ? A . n A 1 79 ASP 79 79 ? ? ? A . n A 1 80 ALA 80 80 ? ? ? A . n A 1 81 ALA 81 81 ? ? ? A . n A 1 82 GLN 82 82 ? ? ? A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 GLU 85 85 85 GLU GLU A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 PHE 87 87 87 PHE PHE A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 HIS 89 89 89 HIS HIS A . n A 1 90 THR 90 90 90 THR THR A . n A 1 91 HIS 91 91 91 HIS HIS A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 PRO 93 93 93 PRO PRO A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 GLN 96 96 96 GLN GLN A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 GLU 100 100 100 GLU GLU A . n A 1 101 ALA 101 101 101 ALA ALA A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 THR 103 103 103 THR THR A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 ARG 108 108 108 ARG ARG A . n A 1 109 GLY 109 109 109 GLY GLY A . n A 1 110 ARG 110 110 110 ARG ARG A . n A 1 111 GLY 111 111 111 GLY GLY A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 PRO 113 113 113 PRO PRO A . n A 1 114 MET 114 114 114 MET MET A . n A 1 115 GLN 115 115 115 GLN GLN A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 ALA 117 117 117 ALA ALA A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 GLN 119 119 119 GLN GLN A . n A 1 120 ALA 120 120 120 ALA ALA A . n A 1 121 PHE 121 121 121 PHE PHE A . n A 1 122 PRO 122 122 122 PRO PRO A . n A 1 123 GLY 123 123 123 GLY GLY A . n A 1 124 VAL 124 124 124 VAL VAL A . n A 1 125 THR 125 125 125 THR THR A . n A 1 126 GLN 126 126 126 GLN GLN A . n A 1 127 GLN 127 127 127 GLN GLN A . n A 1 128 TYR 128 128 128 TYR TYR A . n A 1 129 LEU 129 129 129 LEU LEU A . n A 1 130 ALA 130 130 130 ALA ALA A . n A 1 131 LEU 131 131 131 LEU LEU A . n A 1 132 GLN 132 132 132 GLN GLN A . n A 1 133 HIS 133 133 133 HIS HIS A . n A 1 134 ALA 134 134 134 ALA ALA A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 GLN 136 136 136 GLN GLN A . n A 1 137 ARG 137 137 137 ARG ARG A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 GLU 139 139 139 GLU GLU A . n A 1 140 HIS 140 140 140 HIS HIS A . n A 1 141 GLU 141 141 141 GLU GLU A . n A 1 142 ASP 142 142 142 ASP ASP A . n A 1 143 ALA 143 143 143 ALA ALA A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 PRO 145 145 145 PRO PRO A . n A 1 146 HIS 146 146 146 HIS HIS A . n A 1 147 ALA 147 147 147 ALA ALA A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 GLU 149 149 149 GLU GLU A . n A 1 150 ALA 150 150 150 ALA ALA A . n A 1 151 LEU 151 151 151 LEU LEU A . n A 1 152 ARG 152 152 152 ARG ARG A . n A 1 153 ASP 153 153 153 ASP ASP A . n A 1 154 ALA 154 154 154 ALA ALA A . n A 1 155 LEU 155 155 155 LEU LEU A . n A 1 156 ALA 156 156 156 ALA ALA A . n A 1 157 ASP 157 157 157 ASP ASP A . n A 1 158 LEU 158 158 158 LEU LEU A . n A 1 159 GLU 159 159 159 GLU GLU A . n A 1 160 LEU 160 160 160 LEU LEU A . n A 1 161 ALA 161 161 161 ALA ALA A . n A 1 162 HIS 162 162 162 HIS HIS A . n A 1 163 GLY 163 163 163 GLY GLY A . n A 1 164 PRO 164 164 164 PRO PRO A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 ILE 166 166 166 ILE ILE A . n A 1 167 ARG 167 167 167 ARG ARG A . n A 1 168 ALA 168 168 168 ALA ALA A . n A 1 169 GLY 169 169 169 GLY GLY A . n A 1 170 ILE 170 170 170 ILE ILE A . n A 1 171 ASN 171 171 171 ASN ASN A . n A 1 172 THR 172 172 172 THR THR A . n A 1 173 LEU 173 173 173 LEU LEU A . n A 1 174 PRO 174 174 174 PRO PRO A . n A 1 175 THR 175 175 175 THR THR A . n A 1 176 ALA 176 176 176 ALA ALA A . n A 1 177 GLY 177 177 177 GLY GLY A . n A 1 178 ALA 178 178 178 ALA ALA A . n A 1 179 PHE 179 179 179 PHE PHE A . n A 1 180 ALA 180 180 180 ALA ALA A . n A 1 181 ARG 181 181 181 ARG ARG A . n A 1 182 SER 182 182 182 SER SER A . n A 1 183 ALA 183 183 183 ALA ALA A . n A 1 184 ASP 184 184 184 ASP ASP A . n A 1 185 GLU 185 185 185 GLU GLU A . n A 1 186 LEU 186 186 186 LEU LEU A . n A 1 187 ALA 187 187 187 ALA ALA A . n A 1 188 GLY 188 188 188 GLY GLY A . n A 1 189 PHE 189 189 189 PHE PHE A . n A 1 190 GLN 190 190 190 GLN GLN A . n A 1 191 HIS 191 191 191 HIS HIS A . n A 1 192 ALA 192 192 192 ALA ALA A . n A 1 193 TYR 193 193 193 TYR TYR A . n A 1 194 ARG 194 194 194 ARG ARG A . n A 1 195 ASP 195 195 195 ASP ASP A . n A 1 196 ILE 196 196 196 ILE ILE A . n A 1 197 ALA 197 197 197 ALA ALA A . n A 1 198 LEU 198 198 198 LEU LEU A . n A 1 199 GLY 199 199 199 GLY GLY A . n A 1 200 GLN 200 200 200 GLN GLN A . n A 1 201 LEU 201 201 201 LEU LEU A . n A 1 202 SER 202 202 202 SER SER A . n A 1 203 LEU 203 203 203 LEU LEU A . n A 1 204 ALA 204 204 204 ALA ALA A . n A 1 205 ARG 205 205 205 ARG ARG A . n A 1 206 THR 206 206 206 THR THR A . n A 1 207 LEU 207 207 207 LEU LEU A . n A 1 208 ASP 208 208 208 ASP ASP A . n A 1 209 LEU 209 209 209 LEU LEU A . n A 1 210 VAL 210 210 210 VAL VAL A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 GLU 212 212 212 GLU GLU A . n A 1 213 ARG 213 213 213 ARG ARG A . n A 1 214 TYR 214 214 214 TYR TYR A . n A 1 215 GLY 215 215 215 GLY GLY A . n A 1 216 ASN 216 216 216 ASN ASN A . n A 1 217 ASP 217 217 217 ASP ASP A . n A 1 218 ASP 218 218 218 ASP ASP A . n A 1 219 ILE 219 219 219 ILE ILE A . n A 1 220 HIS 220 220 220 HIS HIS A . n A 1 221 GLY 221 221 221 GLY GLY A . n A 1 222 ALA 222 222 222 ALA ALA A . n A 1 223 LEU 223 223 223 LEU LEU A . n A 1 224 GLY 224 224 224 GLY GLY A . n A 1 225 ALA 225 225 225 ALA ALA A . n A 1 226 LEU 226 226 226 LEU LEU A . n A 1 227 ILE 227 227 227 ILE ILE A . n A 1 228 GLN 228 228 228 GLN GLN A . n A 1 229 ALA 229 229 229 ALA ALA A . n A 1 230 LEU 230 230 230 LEU LEU A . n A 1 231 GLY 231 231 231 GLY GLY A . n A 1 232 HIS 232 232 232 HIS HIS A . n A 1 233 ASP 233 233 233 ASP ASP A . n A 1 234 LEU 234 234 234 LEU LEU A . n A 1 235 ALA 235 235 235 ALA ALA A . n A 1 236 ALA 236 236 236 ALA ALA A . n A 1 237 ALA 237 237 237 ALA ALA A . n A 1 238 THR 238 238 238 THR THR A . n A 1 239 PRO 239 239 239 PRO PRO A . n A 1 240 SER 240 240 240 SER SER A . n A 1 241 THR 241 241 241 THR THR A . n A 1 242 ASP 242 242 242 ASP ASP A . n A 1 243 GLY 243 243 243 GLY GLY A . n A 1 244 VAL 244 244 244 VAL VAL A . n A 1 245 ARG 245 245 245 ARG ARG A . n A 1 246 LEU 246 246 246 LEU LEU A . n A 1 247 GLN 247 247 247 GLN GLN A . n A 1 248 VAL 248 248 248 VAL VAL A . n A 1 249 LEU 249 249 249 LEU LEU A . n A 1 250 ALA 250 250 250 ALA ALA A . n A 1 251 SER 251 251 251 SER SER A . n A 1 252 ASP 252 252 252 ASP ASP A . n A 1 253 LEU 253 253 253 LEU LEU A . n A 1 254 TYR 254 254 254 TYR TYR A . n A 1 255 GLN 255 255 255 GLN GLN A . n A 1 256 VAL 256 256 256 VAL VAL A . n A 1 257 GLU 257 257 257 GLU GLU A . n A 1 258 VAL 258 258 258 VAL VAL A . n A 1 259 ALA 259 259 259 ALA ALA A . n A 1 260 ALA 260 260 260 ALA ALA A . n A 1 261 THR 261 261 261 THR THR A . n A 1 262 VAL 262 262 262 VAL VAL A . n A 1 263 LEU 263 263 263 LEU LEU A . n A 1 264 GLU 264 264 264 GLU GLU A . n A 1 265 GLU 265 265 265 GLU GLU A . n A 1 266 CYS 266 266 266 CYS CYS A . n A 1 267 ASN 267 267 267 ASN ASN A . n A 1 268 ALA 268 268 268 ALA ALA A . n A 1 269 LEU 269 269 269 LEU LEU A . n A 1 270 LYS 270 270 270 LYS LYS A . n A 1 271 GLN 271 271 271 GLN GLN A . n A 1 272 ARG 272 272 272 ARG ARG A . n A 1 273 LEU 273 273 273 LEU LEU A . n A 1 274 GLY 274 274 274 GLY GLY A . n A 1 275 ASN 275 275 ? ? ? A . n A 1 276 ALA 276 276 ? ? ? A . n A 1 277 GLY 277 277 ? ? ? A . n A 1 278 SER 278 278 ? ? ? A . n A 1 279 GLN 279 279 ? ? ? A . n A 1 280 GLU 280 280 ? ? ? A . n A 1 281 CYS 281 281 281 CYS CYS A . n A 1 282 ALA 282 282 282 ALA ALA A . n A 1 283 ASP 283 283 283 ASP ASP A . n A 1 284 ALA 284 284 284 ALA ALA A . n A 1 285 GLN 285 285 285 GLN GLN A . n A 1 286 GLY 286 286 286 GLY GLY A . n A 1 287 LEU 287 287 287 LEU LEU A . n A 1 288 MET 288 288 288 MET MET A . n A 1 289 ARG 289 289 289 ARG ARG A . n A 1 290 ASP 290 290 290 ASP ASP A . n A 1 291 LEU 291 291 291 LEU LEU A . n A 1 292 VAL 292 292 292 VAL VAL A . n A 1 293 GLY 293 293 293 GLY GLY A . n A 1 294 ILE 294 294 294 ILE ILE A . n A 1 295 SER 295 295 295 SER SER A . n A 1 296 GLU 296 296 296 GLU GLU A . n A 1 297 ASP 297 297 297 ASP ASP A . n A 1 298 LYS 298 298 298 LYS LYS A . n A 1 299 TRP 299 299 299 TRP TRP A . n A 1 300 ILE 300 300 300 ILE ILE A . n A 1 301 ALA 301 301 301 ALA ALA A . n A 1 302 PRO 302 302 302 PRO PRO A . n A 1 303 ALA 303 303 303 ALA ALA A . n A 1 304 ARG 304 304 304 ARG ARG A . n A 1 305 PHE 305 305 305 PHE PHE A . n A 1 306 GLU 306 306 306 GLU GLU A . n A 1 307 LYS 307 307 307 LYS LYS A . n A 1 308 LEU 308 308 308 LEU LEU A . n A 1 309 ALA 309 309 309 ALA ALA A . n A 1 310 GLU 310 310 310 GLU GLU A . n A 1 311 ARG 311 311 311 ARG ARG A . n A 1 312 HIS 312 312 312 HIS HIS A . n A 1 313 GLY 313 313 313 GLY GLY A . n A 1 314 ALA 314 314 314 ALA ALA A . n A 1 315 ASN 315 315 315 ASN ASN A . n A 1 316 ALA 316 316 316 ALA ALA A . n A 1 317 LEU 317 317 317 LEU LEU A . n A 1 318 SER 318 318 318 SER SER A . n A 1 319 GLU 319 319 319 GLU GLU A . n A 1 320 ARG 320 320 320 ARG ARG A . n A 1 321 ILE 321 321 321 ILE ILE A . n A 1 322 ALA 322 322 322 ALA ALA A . n A 1 323 PHE 323 323 323 PHE PHE A . n A 1 324 LEU 324 324 324 LEU LEU A . n A 1 325 GLY 325 325 325 GLY GLY A . n A 1 326 GLY 326 326 326 GLY GLY A . n A 1 327 VAL 327 327 327 VAL VAL A . n A 1 328 ARG 328 328 328 ARG ARG A . n A 1 329 GLN 329 329 329 GLN GLN A . n A 1 330 ILE 330 330 330 ILE ILE A . n A 1 331 LEU 331 331 331 LEU LEU A . n A 1 332 LYS 332 332 332 LYS LYS A . n A 1 333 ASP 333 333 333 ASP ASP A . n A 1 334 LEU 334 334 334 LEU LEU A . n A 1 335 PRO 335 335 335 PRO PRO A . n A 1 336 THR 336 336 336 THR THR A . n A 1 337 GLN 337 337 337 GLN GLN A . n A 1 338 ILE 338 338 338 ILE ILE A . n A 1 339 TYR 339 339 339 TYR TYR A . n A 1 340 ALA 340 340 340 ALA ALA A . n A 1 341 ASP 341 341 341 ASP ASP A . n A 1 342 MET 342 342 342 MET MET A . n A 1 343 ASP 343 343 343 ASP ASP A . n A 1 344 VAL 344 344 344 VAL VAL A . n A 1 345 ARG 345 345 345 ARG ARG A . n A 1 346 ALA 346 346 346 ALA ALA A . n A 1 347 THR 347 347 347 THR THR A . n A 1 348 VAL 348 348 348 VAL VAL A . n A 1 349 LEU 349 349 349 LEU LEU A . n A 1 350 ALA 350 350 350 ALA ALA A . n A 1 351 ALA 351 351 351 ALA ALA A . n A 1 352 ALA 352 352 352 ALA ALA A . n A 1 353 GLN 353 353 353 GLN GLN A . n A 1 354 ASP 354 354 354 ASP ASP A . n A 1 355 ALA 355 355 355 ALA ALA A . n A 1 356 LEU 356 356 356 LEU LEU A . n A 1 357 ASP 357 357 357 ASP ASP A . n A 1 358 ASN 358 358 358 ASN ASN A . n A 1 359 ALA 359 359 359 ALA ALA A . n A 1 360 ILE 360 360 360 ILE ILE A . n A 1 361 ALA 361 361 361 ALA ALA A . n A 1 362 MET 362 362 362 MET MET A . n A 1 363 GLU 363 363 363 GLU GLU A . n A 1 364 ASN 364 364 ? ? ? A . n A 1 365 ALA 365 365 ? ? ? A . n # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 4 talianensis@gmail.com Tatyana Prudnikova ? 'principal investigator/group leader' 0000-0002-9969-1993 5 ivanaks@seznam.cz Ivana 'Kuta Smatanova' ? 'principal investigator/group leader' 0000-0002-1337-9481 6 bumba@biomed.cas.cz Ladislav Bumba ? 'principal investigator/group leader' 0000-0001-6659-5447 7 kamanova@biomed.cas.cz Jana Kamanova ? 'principal investigator/group leader' 0000-0001-6574-4404 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 401 1 CA CA A . C 3 NA 1 402 2 NA NA A . D 4 CL 1 403 3 CL CL A . E 5 GOL 1 404 4 GOL GOL A . F 6 ACT 1 405 5 ACT ACT A . G 7 PGE 1 406 6 PGE PGE A . H 8 HOH 1 501 121 HOH HOH A . H 8 HOH 2 502 155 HOH HOH A . H 8 HOH 3 503 5 HOH HOH A . H 8 HOH 4 504 95 HOH HOH A . H 8 HOH 5 505 118 HOH HOH A . H 8 HOH 6 506 89 HOH HOH A . H 8 HOH 7 507 70 HOH HOH A . H 8 HOH 8 508 54 HOH HOH A . H 8 HOH 9 509 38 HOH HOH A . H 8 HOH 10 510 33 HOH HOH A . H 8 HOH 11 511 87 HOH HOH A . H 8 HOH 12 512 28 HOH HOH A . H 8 HOH 13 513 39 HOH HOH A . H 8 HOH 14 514 96 HOH HOH A . H 8 HOH 15 515 169 HOH HOH A . H 8 HOH 16 516 52 HOH HOH A . H 8 HOH 17 517 107 HOH HOH A . H 8 HOH 18 518 184 HOH HOH A . H 8 HOH 19 519 49 HOH HOH A . H 8 HOH 20 520 11 HOH HOH A . H 8 HOH 21 521 195 HOH HOH A . H 8 HOH 22 522 188 HOH HOH A . H 8 HOH 23 523 16 HOH HOH A . H 8 HOH 24 524 112 HOH HOH A . H 8 HOH 25 525 83 HOH HOH A . H 8 HOH 26 526 99 HOH HOH A . H 8 HOH 27 527 194 HOH HOH A . H 8 HOH 28 528 125 HOH HOH A . H 8 HOH 29 529 73 HOH HOH A . H 8 HOH 30 530 1 HOH HOH A . H 8 HOH 31 531 64 HOH HOH A . H 8 HOH 32 532 101 HOH HOH A . H 8 HOH 33 533 3 HOH HOH A . H 8 HOH 34 534 19 HOH HOH A . H 8 HOH 35 535 183 HOH HOH A . H 8 HOH 36 536 50 HOH HOH A . H 8 HOH 37 537 6 HOH HOH A . H 8 HOH 38 538 69 HOH HOH A . H 8 HOH 39 539 71 HOH HOH A . H 8 HOH 40 540 57 HOH HOH A . H 8 HOH 41 541 58 HOH HOH A . H 8 HOH 42 542 74 HOH HOH A . H 8 HOH 43 543 10 HOH HOH A . H 8 HOH 44 544 160 HOH HOH A . H 8 HOH 45 545 192 HOH HOH A . H 8 HOH 46 546 114 HOH HOH A . H 8 HOH 47 547 139 HOH HOH A . H 8 HOH 48 548 55 HOH HOH A . H 8 HOH 49 549 100 HOH HOH A . H 8 HOH 50 550 42 HOH HOH A . H 8 HOH 51 551 59 HOH HOH A . H 8 HOH 52 552 2 HOH HOH A . H 8 HOH 53 553 86 HOH HOH A . H 8 HOH 54 554 172 HOH HOH A . H 8 HOH 55 555 29 HOH HOH A . H 8 HOH 56 556 103 HOH HOH A . H 8 HOH 57 557 123 HOH HOH A . H 8 HOH 58 558 14 HOH HOH A . H 8 HOH 59 559 8 HOH HOH A . H 8 HOH 60 560 51 HOH HOH A . H 8 HOH 61 561 189 HOH HOH A . H 8 HOH 62 562 72 HOH HOH A . H 8 HOH 63 563 26 HOH HOH A . H 8 HOH 64 564 18 HOH HOH A . H 8 HOH 65 565 130 HOH HOH A . H 8 HOH 66 566 141 HOH HOH A . H 8 HOH 67 567 17 HOH HOH A . H 8 HOH 68 568 60 HOH HOH A . H 8 HOH 69 569 68 HOH HOH A . H 8 HOH 70 570 105 HOH HOH A . H 8 HOH 71 571 35 HOH HOH A . H 8 HOH 72 572 46 HOH HOH A . H 8 HOH 73 573 12 HOH HOH A . H 8 HOH 74 574 66 HOH HOH A . H 8 HOH 75 575 185 HOH HOH A . H 8 HOH 76 576 30 HOH HOH A . H 8 HOH 77 577 48 HOH HOH A . H 8 HOH 78 578 113 HOH HOH A . H 8 HOH 79 579 53 HOH HOH A . H 8 HOH 80 580 22 HOH HOH A . H 8 HOH 81 581 102 HOH HOH A . H 8 HOH 82 582 78 HOH HOH A . H 8 HOH 83 583 13 HOH HOH A . H 8 HOH 84 584 124 HOH HOH A . H 8 HOH 85 585 43 HOH HOH A . H 8 HOH 86 586 91 HOH HOH A . H 8 HOH 87 587 179 HOH HOH A . H 8 HOH 88 588 40 HOH HOH A . H 8 HOH 89 589 7 HOH HOH A . H 8 HOH 90 590 56 HOH HOH A . H 8 HOH 91 591 84 HOH HOH A . H 8 HOH 92 592 182 HOH HOH A . H 8 HOH 93 593 106 HOH HOH A . H 8 HOH 94 594 25 HOH HOH A . H 8 HOH 95 595 9 HOH HOH A . H 8 HOH 96 596 65 HOH HOH A . H 8 HOH 97 597 75 HOH HOH A . H 8 HOH 98 598 173 HOH HOH A . H 8 HOH 99 599 4 HOH HOH A . H 8 HOH 100 600 37 HOH HOH A . H 8 HOH 101 601 62 HOH HOH A . H 8 HOH 102 602 98 HOH HOH A . H 8 HOH 103 603 20 HOH HOH A . H 8 HOH 104 604 187 HOH HOH A . H 8 HOH 105 605 77 HOH HOH A . H 8 HOH 106 606 120 HOH HOH A . H 8 HOH 107 607 21 HOH HOH A . H 8 HOH 108 608 191 HOH HOH A . H 8 HOH 109 609 67 HOH HOH A . H 8 HOH 110 610 90 HOH HOH A . H 8 HOH 111 611 15 HOH HOH A . H 8 HOH 112 612 47 HOH HOH A . H 8 HOH 113 613 45 HOH HOH A . H 8 HOH 114 614 97 HOH HOH A . H 8 HOH 115 615 34 HOH HOH A . H 8 HOH 116 616 197 HOH HOH A . H 8 HOH 117 617 76 HOH HOH A . H 8 HOH 118 618 167 HOH HOH A . H 8 HOH 119 619 109 HOH HOH A . H 8 HOH 120 620 93 HOH HOH A . H 8 HOH 121 621 190 HOH HOH A . H 8 HOH 122 622 32 HOH HOH A . H 8 HOH 123 623 126 HOH HOH A . H 8 HOH 124 624 196 HOH HOH A . H 8 HOH 125 625 88 HOH HOH A . H 8 HOH 126 626 63 HOH HOH A . H 8 HOH 127 627 122 HOH HOH A . H 8 HOH 128 628 61 HOH HOH A . H 8 HOH 129 629 108 HOH HOH A . H 8 HOH 130 630 186 HOH HOH A . H 8 HOH 131 631 127 HOH HOH A . H 8 HOH 132 632 175 HOH HOH A . H 8 HOH 133 633 162 HOH HOH A . H 8 HOH 134 634 23 HOH HOH A . H 8 HOH 135 635 81 HOH HOH A . H 8 HOH 136 636 128 HOH HOH A . H 8 HOH 137 637 82 HOH HOH A . H 8 HOH 138 638 31 HOH HOH A . H 8 HOH 139 639 110 HOH HOH A . H 8 HOH 140 640 41 HOH HOH A . H 8 HOH 141 641 137 HOH HOH A . H 8 HOH 142 642 132 HOH HOH A . H 8 HOH 143 643 133 HOH HOH A . H 8 HOH 144 644 116 HOH HOH A . H 8 HOH 145 645 117 HOH HOH A . H 8 HOH 146 646 193 HOH HOH A . H 8 HOH 147 647 80 HOH HOH A . H 8 HOH 148 648 79 HOH HOH A . H 8 HOH 149 649 129 HOH HOH A . H 8 HOH 150 650 27 HOH HOH A . H 8 HOH 151 651 85 HOH HOH A . H 8 HOH 152 652 44 HOH HOH A . H 8 HOH 153 653 134 HOH HOH A . H 8 HOH 154 654 136 HOH HOH A . H 8 HOH 155 655 94 HOH HOH A . H 8 HOH 156 656 131 HOH HOH A . H 8 HOH 157 657 92 HOH HOH A . H 8 HOH 158 658 115 HOH HOH A . H 8 HOH 159 659 119 HOH HOH A . H 8 HOH 160 660 168 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A NA 402 ? C NA . 2 1 A CL 403 ? D CL . 3 1 A HOH 637 ? H HOH . 4 1 A HOH 652 ? H HOH . 5 1 A HOH 660 ? H HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 142 ? A ASP 142 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 OD1 ? A ASP 333 ? A ASP 333 ? 1_555 38.0 ? 2 OD2 ? A ASP 142 ? A ASP 142 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 OD1 ? A ASP 343 ? A ASP 343 ? 1_555 22.9 ? 3 OD1 ? A ASP 333 ? A ASP 333 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 OD1 ? A ASP 343 ? A ASP 343 ? 1_555 15.6 ? 4 OD2 ? A ASP 142 ? A ASP 142 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 OD2 ? A ASP 343 ? A ASP 343 ? 1_555 21.8 ? 5 OD1 ? A ASP 333 ? A ASP 333 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 OD2 ? A ASP 343 ? A ASP 343 ? 1_555 16.6 ? 6 OD1 ? A ASP 343 ? A ASP 343 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 OD2 ? A ASP 343 ? A ASP 343 ? 1_555 1.0 ? 7 OD2 ? A ASP 142 ? A ASP 142 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 O ? H HOH . ? A HOH 560 ? 8_664 83.7 ? 8 OD1 ? A ASP 333 ? A ASP 333 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 O ? H HOH . ? A HOH 560 ? 8_664 62.1 ? 9 OD1 ? A ASP 343 ? A ASP 343 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 O ? H HOH . ? A HOH 560 ? 8_664 72.5 ? 10 OD2 ? A ASP 343 ? A ASP 343 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 O ? H HOH . ? A HOH 560 ? 8_664 73.1 ? 11 OD2 ? A ASP 142 ? A ASP 142 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 O ? H HOH . ? A HOH 582 ? 8_664 74.6 ? 12 OD1 ? A ASP 333 ? A ASP 333 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 O ? H HOH . ? A HOH 582 ? 8_664 100.7 ? 13 OD1 ? A ASP 343 ? A ASP 343 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 O ? H HOH . ? A HOH 582 ? 8_664 92.2 ? 14 OD2 ? A ASP 343 ? A ASP 343 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 O ? H HOH . ? A HOH 582 ? 8_664 91.5 ? 15 O ? H HOH . ? A HOH 560 ? 8_664 CA ? B CA . ? A CA 401 ? 1_555 O ? H HOH . ? A HOH 582 ? 8_664 78.9 ? 16 OD2 ? A ASP 142 ? A ASP 142 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 O ? H HOH . ? A HOH 605 ? 3_654 152.9 ? 17 OD1 ? A ASP 333 ? A ASP 333 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 O ? H HOH . ? A HOH 605 ? 3_654 128.6 ? 18 OD1 ? A ASP 343 ? A ASP 343 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 O ? H HOH . ? A HOH 605 ? 3_654 142.5 ? 19 OD2 ? A ASP 343 ? A ASP 343 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 O ? H HOH . ? A HOH 605 ? 3_654 143.3 ? 20 O ? H HOH . ? A HOH 560 ? 8_664 CA ? B CA . ? A CA 401 ? 1_555 O ? H HOH . ? A HOH 605 ? 3_654 71.3 ? 21 O ? H HOH . ? A HOH 582 ? 8_664 CA ? B CA . ? A CA 401 ? 1_555 O ? H HOH . ? A HOH 605 ? 3_654 90.2 ? 22 OE1 ? A GLN 228 ? A GLN 228 ? 1_555 NA ? C NA . ? A NA 402 ? 1_555 OE1 ? A GLN 228 ? A GLN 228 ? 1_555 0.0 ? 23 OE1 ? A GLN 228 ? A GLN 228 ? 1_555 NA ? C NA . ? A NA 402 ? 1_555 O ? H HOH . ? A HOH 513 ? 1_555 95.0 ? 24 OE1 ? A GLN 228 ? A GLN 228 ? 1_555 NA ? C NA . ? A NA 402 ? 1_555 O ? H HOH . ? A HOH 513 ? 1_555 95.0 ? 25 OE1 ? A GLN 228 ? A GLN 228 ? 1_555 NA ? C NA . ? A NA 402 ? 1_555 O ? H HOH . ? A HOH 513 ? 5_655 101.0 ? 26 OE1 ? A GLN 228 ? A GLN 228 ? 1_555 NA ? C NA . ? A NA 402 ? 1_555 O ? H HOH . ? A HOH 513 ? 5_655 101.0 ? 27 O ? H HOH . ? A HOH 513 ? 1_555 NA ? C NA . ? A NA 402 ? 1_555 O ? H HOH . ? A HOH 513 ? 5_655 109.7 ? 28 OE1 ? A GLN 228 ? A GLN 228 ? 1_555 NA ? C NA . ? A NA 402 ? 1_555 O ? H HOH . ? A HOH 612 ? 1_555 59.0 ? 29 OE1 ? A GLN 228 ? A GLN 228 ? 1_555 NA ? C NA . ? A NA 402 ? 1_555 O ? H HOH . ? A HOH 612 ? 1_555 59.0 ? 30 O ? H HOH . ? A HOH 513 ? 1_555 NA ? C NA . ? A NA 402 ? 1_555 O ? H HOH . ? A HOH 612 ? 1_555 70.1 ? 31 O ? H HOH . ? A HOH 513 ? 5_655 NA ? C NA . ? A NA 402 ? 1_555 O ? H HOH . ? A HOH 612 ? 1_555 62.3 ? 32 OE1 ? A GLN 228 ? A GLN 228 ? 1_555 NA ? C NA . ? A NA 402 ? 1_555 O ? H HOH . ? A HOH 612 ? 5_655 148.4 ? 33 OE1 ? A GLN 228 ? A GLN 228 ? 1_555 NA ? C NA . ? A NA 402 ? 1_555 O ? H HOH . ? A HOH 612 ? 5_655 148.4 ? 34 O ? H HOH . ? A HOH 513 ? 1_555 NA ? C NA . ? A NA 402 ? 1_555 O ? H HOH . ? A HOH 612 ? 5_655 62.3 ? 35 O ? H HOH . ? A HOH 513 ? 5_655 NA ? C NA . ? A NA 402 ? 1_555 O ? H HOH . ? A HOH 612 ? 5_655 70.1 ? 36 O ? H HOH . ? A HOH 612 ? 1_555 NA ? C NA . ? A NA 402 ? 1_555 O ? H HOH . ? A HOH 612 ? 5_655 91.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-03-01 2 'Structure model' 1 1 2023-04-19 3 'Structure model' 1 2 2023-06-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_abbrev' 2 2 'Structure model' '_citation.journal_id_CSD' 3 2 'Structure model' '_citation.journal_id_ISSN' 4 2 'Structure model' '_citation.page_first' 5 2 'Structure model' '_citation.page_last' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 2 'Structure model' '_citation_author.identifier_ORCID' 11 2 'Structure model' '_citation_author.name' 12 3 'Structure model' '_citation.journal_volume' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 29.0040 _pdbx_refine_tls.origin_y 66.3450 _pdbx_refine_tls.origin_z 5.5360 _pdbx_refine_tls.T[1][1] 0.0775 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] -0.0333 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] 0.0072 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.0702 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] 0.0046 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.0411 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 0.8919 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] 0.4761 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] 0.8115 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 1.0067 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] 0.6491 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 2.1698 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] -0.0181 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] -0.0897 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] -0.0600 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] 0.0013 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] -0.0180 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] 0.1278 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] 0.2461 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] -0.3253 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] 0.0361 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 83 _pdbx_refine_tls_group.beg_PDB_ins_code ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 363 _pdbx_refine_tls_group.end_PDB_ins_code ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0267 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? Arcimboldo ? ? ? . 4 # _pdbx_entry_details.entry_id 7YYG _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 142 ? ? 70.93 47.42 2 1 ASP A 217 ? ? -118.74 -139.17 3 1 ALA A 282 ? ? -95.36 59.50 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 660 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 5.91 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A THR 2 ? A THR 2 3 1 Y 1 A ARG 3 ? A ARG 3 4 1 Y 1 A ILE 4 ? A ILE 4 5 1 Y 1 A ASP 5 ? A ASP 5 6 1 Y 1 A ALA 6 ? A ALA 6 7 1 Y 1 A ALA 7 ? A ALA 7 8 1 Y 1 A PRO 8 ? A PRO 8 9 1 Y 1 A ASN 9 ? A ASN 9 10 1 Y 1 A PRO 10 ? A PRO 10 11 1 Y 1 A PHE 11 ? A PHE 11 12 1 Y 1 A HIS 12 ? A HIS 12 13 1 Y 1 A ALA 13 ? A ALA 13 14 1 Y 1 A ALA 14 ? A ALA 14 15 1 Y 1 A MET 15 ? A MET 15 16 1 Y 1 A GLN 16 ? A GLN 16 17 1 Y 1 A GLY 17 ? A GLY 17 18 1 Y 1 A ARG 18 ? A ARG 18 19 1 Y 1 A HIS 19 ? A HIS 19 20 1 Y 1 A ASP 20 ? A ASP 20 21 1 Y 1 A ALA 21 ? A ALA 21 22 1 Y 1 A SER 22 ? A SER 22 23 1 Y 1 A ALA 23 ? A ALA 23 24 1 Y 1 A ASN 24 ? A ASN 24 25 1 Y 1 A THR 25 ? A THR 25 26 1 Y 1 A SER 26 ? A SER 26 27 1 Y 1 A SER 27 ? A SER 27 28 1 Y 1 A GLY 28 ? A GLY 28 29 1 Y 1 A TRP 29 ? A TRP 29 30 1 Y 1 A LEU 30 ? A LEU 30 31 1 Y 1 A GLN 31 ? A GLN 31 32 1 Y 1 A GLY 32 ? A GLY 32 33 1 Y 1 A GLN 33 ? A GLN 33 34 1 Y 1 A ARG 34 ? A ARG 34 35 1 Y 1 A ILE 35 ? A ILE 35 36 1 Y 1 A ALA 36 ? A ALA 36 37 1 Y 1 A PRO 37 ? A PRO 37 38 1 Y 1 A ALA 38 ? A ALA 38 39 1 Y 1 A PRO 39 ? A PRO 39 40 1 Y 1 A THR 40 ? A THR 40 41 1 Y 1 A GLY 41 ? A GLY 41 42 1 Y 1 A ILE 42 ? A ILE 42 43 1 Y 1 A SER 43 ? A SER 43 44 1 Y 1 A LEU 44 ? A LEU 44 45 1 Y 1 A ALA 45 ? A ALA 45 46 1 Y 1 A ASP 46 ? A ASP 46 47 1 Y 1 A ALA 47 ? A ALA 47 48 1 Y 1 A ALA 48 ? A ALA 48 49 1 Y 1 A GLU 49 ? A GLU 49 50 1 Y 1 A GLU 50 ? A GLU 50 51 1 Y 1 A LEU 51 ? A LEU 51 52 1 Y 1 A SER 52 ? A SER 52 53 1 Y 1 A LEU 53 ? A LEU 53 54 1 Y 1 A HIS 54 ? A HIS 54 55 1 Y 1 A MET 55 ? A MET 55 56 1 Y 1 A ALA 56 ? A ALA 56 57 1 Y 1 A GLN 57 ? A GLN 57 58 1 Y 1 A ALA 58 ? A ALA 58 59 1 Y 1 A ALA 59 ? A ALA 59 60 1 Y 1 A GLU 60 ? A GLU 60 61 1 Y 1 A GLU 61 ? A GLU 61 62 1 Y 1 A LYS 62 ? A LYS 62 63 1 Y 1 A HIS 63 ? A HIS 63 64 1 Y 1 A HIS 64 ? A HIS 64 65 1 Y 1 A SER 65 ? A SER 65 66 1 Y 1 A GLU 66 ? A GLU 66 67 1 Y 1 A ARG 67 ? A ARG 67 68 1 Y 1 A LYS 68 ? A LYS 68 69 1 Y 1 A VAL 69 ? A VAL 69 70 1 Y 1 A THR 70 ? A THR 70 71 1 Y 1 A ALA 71 ? A ALA 71 72 1 Y 1 A GLU 72 ? A GLU 72 73 1 Y 1 A ARG 73 ? A ARG 73 74 1 Y 1 A PRO 74 ? A PRO 74 75 1 Y 1 A MET 75 ? A MET 75 76 1 Y 1 A LEU 76 ? A LEU 76 77 1 Y 1 A TRP 77 ? A TRP 77 78 1 Y 1 A LEU 78 ? A LEU 78 79 1 Y 1 A ASP 79 ? A ASP 79 80 1 Y 1 A ALA 80 ? A ALA 80 81 1 Y 1 A ALA 81 ? A ALA 81 82 1 Y 1 A GLN 82 ? A GLN 82 83 1 Y 1 A ASN 275 ? A ASN 275 84 1 Y 1 A ALA 276 ? A ALA 276 85 1 Y 1 A GLY 277 ? A GLY 277 86 1 Y 1 A SER 278 ? A SER 278 87 1 Y 1 A GLN 279 ? A GLN 279 88 1 Y 1 A GLU 280 ? A GLU 280 89 1 Y 1 A ASN 364 ? A ASN 364 90 1 Y 1 A ALA 365 ? A ALA 365 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Grant Agency of the Czech Republic' 'Czech Republic' 21-05466S 1 'Czech Academy of Sciences' 'Czech Republic' LQ200202001 2 'Czech Academy of Sciences' 'Czech Republic' LM2018133 3 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 'SODIUM ION' NA 4 'CHLORIDE ION' CL 5 GLYCEROL GOL 6 'ACETATE ION' ACT 7 'TRIETHYLENE GLYCOL' PGE 8 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #