HEADER DNA BINDING PROTEIN 19-FEB-22 7YZC TITLE CRYSTAL STRUCTURE OF THE ZEBRAFISH FOXH1 BOUND TO THE TGTTTATT SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FORKHEAD BOX PROTEIN H1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FORKHEAD ACTIVIN SIGNAL TRANSDUCER 1,FAST-1,SCHMALSPUR COMPND 5 PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'-D(*AP*GP*AP*TP*TP*GP*TP*TP*TP*AP*TP*TP*GP*AP*GP*A)- COMPND 9 3'); COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA (5'-D(*TP*CP*TP*CP*AP*AP*TP*AP*AP*AP*CP*AP*AP*TP*CP*T)- COMPND 14 3'); COMPND 15 CHAIN: C; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DANIO RERIO; SOURCE 3 ORGANISM_COMMON: ZEBRAFISH; SOURCE 4 ORGANISM_TAXID: 7955; SOURCE 5 GENE: FOXH1, FAST1, SUR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: DANIO RERIO; SOURCE 11 ORGANISM_COMMON: ZEBRAFISH; SOURCE 12 ORGANISM_TAXID: 7955; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: DANIO RERIO; SOURCE 16 ORGANISM_COMMON: ZEBRAFISH; SOURCE 17 ORGANISM_TAXID: 7955 KEYWDS TRANSCRIPTION FACTOR, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.PLUTA,M.J.MACIAS REVDAT 3 31-JAN-24 7YZC 1 REMARK REVDAT 2 07-DEC-22 7YZC 1 JRNL REVDAT 1 16-NOV-22 7YZC 0 JRNL AUTH R.PLUTA,E.ARAGON,N.A.PRESCOTT,L.RUIZ,R.A.MEES,B.BAGINSKI, JRNL AUTH 2 J.R.FLOOD,P.MARTIN-MALPARTIDA,J.MASSAGUE,Y.DAVID,M.J.MACIAS JRNL TITL MOLECULAR BASIS FOR DNA RECOGNITION BY THE MATERNAL PIONEER JRNL TITL 2 TRANSCRIPTION FACTOR FOXH1. JRNL REF NAT COMMUN V. 13 7279 2022 JRNL REFN ESSN 2041-1723 JRNL PMID 36435807 JRNL DOI 10.1038/S41467-022-34925-Y REMARK 2 REMARK 2 RESOLUTION. 2.17 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.17 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 76.91 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 82.5 REMARK 3 NUMBER OF REFLECTIONS : 11564 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 604 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.17 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.23 REMARK 3 REFLECTION IN BIN (WORKING SET) : 70 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 6.83 REMARK 3 BIN R VALUE (WORKING SET) : 0.3910 REMARK 3 BIN FREE R VALUE SET COUNT : 5 REMARK 3 BIN FREE R VALUE : 0.3550 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 955 REMARK 3 NUCLEIC ACID ATOMS : 650 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 38 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.34000 REMARK 3 B22 (A**2) : -0.74000 REMARK 3 B33 (A**2) : -0.61000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.286 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.215 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.190 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.233 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1751 ; 0.008 ; 0.015 REMARK 3 BOND LENGTHS OTHERS (A): 1316 ; 0.002 ; 0.019 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2452 ; 1.233 ; 1.547 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3058 ; 1.223 ; 2.744 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 114 ; 5.408 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 52 ;31.902 ;22.115 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 173 ;13.648 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;17.876 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 235 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1470 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 382 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 464 ; 1.666 ; 2.630 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 461 ; 1.637 ; 2.612 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 574 ; 2.526 ; 3.913 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 575 ; 2.524 ; 3.916 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1287 ; 1.783 ; 2.811 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1288 ; 1.783 ; 2.813 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1879 ; 2.698 ; 4.201 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5272 ; 4.456 ;74.425 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5270 ; 4.450 ;74.432 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 91 A 209 REMARK 3 ORIGIN FOR THE GROUP (A): -4.8150 -18.0860 26.6070 REMARK 3 T TENSOR REMARK 3 T11: 0.0152 T22: 0.2723 REMARK 3 T33: 0.1670 T12: -0.0285 REMARK 3 T13: -0.0042 T23: -0.0094 REMARK 3 L TENSOR REMARK 3 L11: 3.6844 L22: 3.8503 REMARK 3 L33: 6.8304 L12: -0.4391 REMARK 3 L13: -0.3221 L23: 0.1734 REMARK 3 S TENSOR REMARK 3 S11: -0.0907 S12: -0.0239 S13: -0.0496 REMARK 3 S21: -0.0229 S22: 0.0766 S23: 0.1129 REMARK 3 S31: -0.2011 S32: -0.3474 S33: 0.0141 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 16 REMARK 3 ORIGIN FOR THE GROUP (A): -1.7980 -18.6400 12.3670 REMARK 3 T TENSOR REMARK 3 T11: 0.1828 T22: 0.2915 REMARK 3 T33: 0.1382 T12: -0.0757 REMARK 3 T13: 0.0277 T23: 0.0025 REMARK 3 L TENSOR REMARK 3 L11: 2.4902 L22: 7.5703 REMARK 3 L33: 4.6766 L12: -0.2365 REMARK 3 L13: 0.1480 L23: -0.2778 REMARK 3 S TENSOR REMARK 3 S11: 0.0003 S12: 0.1131 S13: 0.0184 REMARK 3 S21: -0.5681 S22: -0.0127 S23: -0.1945 REMARK 3 S31: 0.0127 S32: -0.0791 S33: 0.0123 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 16 REMARK 3 ORIGIN FOR THE GROUP (A): -3.2970 -17.6930 11.7870 REMARK 3 T TENSOR REMARK 3 T11: 0.2818 T22: 0.3336 REMARK 3 T33: 0.1831 T12: -0.0816 REMARK 3 T13: -0.0354 T23: 0.0081 REMARK 3 L TENSOR REMARK 3 L11: 2.2831 L22: 4.9064 REMARK 3 L33: 5.5485 L12: -1.0818 REMARK 3 L13: -0.0162 L23: 0.0186 REMARK 3 S TENSOR REMARK 3 S11: -0.1135 S12: 0.2609 S13: 0.1804 REMARK 3 S21: -1.0198 S22: 0.1164 S23: 0.0390 REMARK 3 S31: -0.2585 S32: -0.3025 S33: -0.0029 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.00 REMARK 3 ION PROBE RADIUS : 0.70 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 7YZC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-FEB-22. REMARK 100 THE DEPOSITION ID IS D_1292121128. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-SEP-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12168 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.170 REMARK 200 RESOLUTION RANGE LOW (A) : 76.910 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 82.5 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.17 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 44.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 7YZ7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG SMEAR HIGH (MIX OF PEG 6000, REMARK 280 PEG 8000, PEG 10000), 0.1 M SODIUM ACETATE PH 4.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.90600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 76.90600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 18.09150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.27850 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 18.09150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.27850 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 76.90600 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 18.09150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 48.27850 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 76.90600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 18.09150 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 48.27850 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 86 REMARK 465 GLY A 87 REMARK 465 LYS A 88 REMARK 465 LYS A 89 REMARK 465 LYS A 90 REMARK 465 GLU A 196 REMARK 465 THR A 197 REMARK 465 ILE A 198 REMARK 465 GLY A 210 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 209 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 93 141.59 -171.16 REMARK 500 PRO A 99 46.35 -80.60 REMARK 500 REMARK 500 REMARK: NULL DBREF 7YZC A 86 210 UNP Q9I9E1 FOXH1_DANRE 86 210 DBREF 7YZC B 1 16 PDB 7YZC 7YZC 1 16 DBREF 7YZC C 1 16 PDB 7YZC 7YZC 1 16 SEQRES 1 A 125 GLY GLY LYS LYS LYS ASN TYR GLN ARG TYR PRO LYS PRO SEQRES 2 A 125 PRO TYR SER TYR LEU ALA MET ILE ALA MET VAL ILE GLN SEQRES 3 A 125 ASN SER PRO GLU LYS LYS LEU THR LEU SER GLU ILE LEU SEQRES 4 A 125 LYS GLU ILE SER THR LEU PHE PRO PHE PHE LYS GLY ASN SEQRES 5 A 125 TYR LYS GLY TRP ARG ASP SER VAL ARG HIS ASN LEU SER SEQRES 6 A 125 SER TYR ASP CYS PHE VAL LYS VAL LEU LYS ASP PRO GLY SEQRES 7 A 125 LYS PRO GLN GLY LYS GLY ASN PHE TRP THR VAL GLU VAL SEQRES 8 A 125 ASN ARG ILE PRO LEU GLU LEU LEU LYS ARG GLN ASN THR SEQRES 9 A 125 ALA VAL SER ARG GLN ASP GLU THR ILE PHE ALA GLN ASP SEQRES 10 A 125 LEU ALA PRO TYR ILE PHE GLN GLY SEQRES 1 B 16 DA DG DA DT DT DG DT DT DT DA DT DT DG SEQRES 2 B 16 DA DG DA SEQRES 1 C 16 DT DC DT DC DA DA DT DA DA DA DC DA DA SEQRES 2 C 16 DT DC DT HET ACT A 301 4 HET ACT C 101 4 HETNAM ACT ACETATE ION FORMUL 4 ACT 2(C2 H3 O2 1-) FORMUL 6 HOH *38(H2 O) HELIX 1 AA1 SER A 101 SER A 113 1 13 HELIX 2 AA2 THR A 119 PHE A 131 1 13 HELIX 3 AA3 PRO A 132 GLY A 136 5 5 HELIX 4 AA4 GLY A 140 TYR A 152 1 13 HELIX 5 AA5 VAL A 176 ILE A 179 5 4 HELIX 6 AA6 PRO A 180 LYS A 185 5 6 HELIX 7 AA7 THR A 189 ASP A 195 1 7 HELIX 8 AA8 LEU A 203 PHE A 208 1 6 SHEET 1 AA1 2 PHE A 155 VAL A 158 0 SHEET 2 AA1 2 PHE A 171 VAL A 174 -1 O PHE A 171 N VAL A 158 CRYST1 36.183 96.557 153.812 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027637 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010357 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006501 0.00000