HEADER DNA BINDING PROTEIN 19-FEB-22 7YZF TITLE CRYSTAL STRUCTURE OF THE HUMAN FOXA2 BOUND TO THE TGTTTATT SITE TITLE 2 (FORKHEAD MOTIF ATAAACA) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'- COMPND 3 D(P*AP*GP*AP*TP*TP*GP*TP*TP*TP*AP*TP*TP*GP*AP*GP*A)-3'); COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DNA (5'- COMPND 8 D(P*TP*CP*TP*CP*AP*AP*TP*AP*AP*AP*CP*AP*AP*TP*CP*T)-3'); COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: HEPATOCYTE NUCLEAR FACTOR 3-BETA; COMPND 13 CHAIN: C; COMPND 14 SYNONYM: HNF-3-BETA,HNF-3B,FORKHEAD BOX PROTEIN A2,TRANSCRIPTION COMPND 15 FACTOR 3B,TCF-3B; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_COMMON: HUMAN; SOURCE 5 ORGANISM_TAXID: 9606; SOURCE 6 MOL_ID: 2; SOURCE 7 SYNTHETIC: YES; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: FOXA2, HNF3B, TCF3B; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSCRIPTION FACTOR, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.PLUTA,M.J.MACIAS REVDAT 3 31-JAN-24 7YZF 1 REMARK REVDAT 2 07-DEC-22 7YZF 1 JRNL REVDAT 1 16-NOV-22 7YZF 0 JRNL AUTH R.PLUTA,E.ARAGON,N.A.PRESCOTT,L.RUIZ,R.A.MEES,B.BAGINSKI, JRNL AUTH 2 J.R.FLOOD,P.MARTIN-MALPARTIDA,J.MASSAGUE,Y.DAVID,M.J.MACIAS JRNL TITL MOLECULAR BASIS FOR DNA RECOGNITION BY THE MATERNAL PIONEER JRNL TITL 2 TRANSCRIPTION FACTOR FOXH1. JRNL REF NAT COMMUN V. 13 7279 2022 JRNL REFN ESSN 2041-1723 JRNL PMID 36435807 JRNL DOI 10.1038/S41467-022-34925-Y REMARK 2 REMARK 2 RESOLUTION. 2.18 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.18 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.42 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 69.2 REMARK 3 NUMBER OF REFLECTIONS : 8314 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.800 REMARK 3 FREE R VALUE TEST SET COUNT : 901 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.18 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.24 REMARK 3 REFLECTION IN BIN (WORKING SET) : 56 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 6.67 REMARK 3 BIN R VALUE (WORKING SET) : 0.4230 REMARK 3 BIN FREE R VALUE SET COUNT : 10 REMARK 3 BIN FREE R VALUE : 0.4160 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 726 REMARK 3 NUCLEIC ACID ATOMS : 656 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 5 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 72.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.74000 REMARK 3 B22 (A**2) : -0.19000 REMARK 3 B33 (A**2) : -0.54000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.401 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.268 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.194 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.039 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1522 ; 0.009 ; 0.015 REMARK 3 BOND LENGTHS OTHERS (A): 1028 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2149 ; 1.173 ; 1.501 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2419 ; 1.337 ; 2.963 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 245 ;21.203 ; 5.519 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 34 ;32.494 ;23.529 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 119 ;15.634 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;14.097 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 198 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1191 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 310 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 343 ; 3.050 ; 4.086 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 342 ; 3.030 ; 4.077 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 427 ; 4.548 ; 6.132 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 428 ; 4.546 ; 6.142 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1179 ; 3.508 ; 4.666 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1177 ; 3.498 ; 4.662 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1722 ; 4.943 ; 6.996 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5047 ; 7.000 ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5046 ; 7.002 ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 16 REMARK 3 ORIGIN FOR THE GROUP (A): -21.3020 -11.6620 -17.2600 REMARK 3 T TENSOR REMARK 3 T11: 0.1121 T22: 0.1893 REMARK 3 T33: 0.2044 T12: 0.0903 REMARK 3 T13: -0.0247 T23: 0.0143 REMARK 3 L TENSOR REMARK 3 L11: 4.5281 L22: 11.7441 REMARK 3 L33: 4.4395 L12: -1.0095 REMARK 3 L13: -0.7509 L23: -0.1193 REMARK 3 S TENSOR REMARK 3 S11: 0.1277 S12: 0.2072 S13: -0.4550 REMARK 3 S21: -0.2962 S22: -0.3920 S23: 0.4163 REMARK 3 S31: 0.4576 S32: -0.0221 S33: 0.2643 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 16 REMARK 3 ORIGIN FOR THE GROUP (A): -21.7180 -11.8710 -15.4310 REMARK 3 T TENSOR REMARK 3 T11: 0.0743 T22: 0.1986 REMARK 3 T33: 0.1322 T12: 0.0711 REMARK 3 T13: 0.0157 T23: 0.0097 REMARK 3 L TENSOR REMARK 3 L11: 5.9432 L22: 9.4817 REMARK 3 L33: 3.3047 L12: -2.0516 REMARK 3 L13: -0.2400 L23: 1.0990 REMARK 3 S TENSOR REMARK 3 S11: 0.1126 S12: 0.0920 S13: -0.5128 REMARK 3 S21: 0.0412 S22: -0.3869 S23: 0.7623 REMARK 3 S31: 0.3412 S32: -0.0309 S33: 0.2743 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 153 C 238 REMARK 3 ORIGIN FOR THE GROUP (A): -9.8450 -2.2250 -16.2090 REMARK 3 T TENSOR REMARK 3 T11: 0.0706 T22: 0.2189 REMARK 3 T33: 0.0453 T12: 0.0900 REMARK 3 T13: 0.0229 T23: 0.0776 REMARK 3 L TENSOR REMARK 3 L11: 4.0961 L22: 2.6778 REMARK 3 L33: 5.9410 L12: 1.0677 REMARK 3 L13: -0.9823 L23: 2.0202 REMARK 3 S TENSOR REMARK 3 S11: -0.0402 S12: -0.0009 S13: 0.1317 REMARK 3 S21: -0.1932 S22: -0.0480 S23: 0.1108 REMARK 3 S31: -0.3777 S32: 0.1055 S33: 0.0882 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.00 REMARK 3 ION PROBE RADIUS : 0.70 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 7YZF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-FEB-22. REMARK 100 THE DEPOSITION ID IS D_1292121197. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-FEB-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979260 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9215 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.179 REMARK 200 RESOLUTION RANGE LOW (A) : 58.421 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.5 REMARK 200 DATA REDUNDANCY : 9.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.18 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 52.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 7YZE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 3350, 0.1 M BIS-TRIS PH 5.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.42100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.42100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 22.72950 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 46.34750 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 22.72950 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 46.34750 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 58.42100 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 22.72950 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 46.34750 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 58.42100 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 22.72950 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 46.34750 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS C 149 REMARK 465 THR C 150 REMARK 465 TYR C 151 REMARK 465 ARG C 152 REMARK 465 SER C 239 REMARK 465 GLY C 240 REMARK 465 ASN C 241 REMARK 465 MET C 242 REMARK 465 PHE C 243 REMARK 465 GLU C 244 REMARK 465 ASN C 245 REMARK 465 GLY C 246 REMARK 465 CYS C 247 REMARK 465 TYR C 248 REMARK 465 LEU C 249 REMARK 465 ARG C 250 REMARK 465 ARG C 251 REMARK 465 GLN C 252 REMARK 465 LYS C 253 REMARK 465 ARG C 254 REMARK 465 PHE C 255 REMARK 465 LYS C 256 REMARK 465 CYS C 257 REMARK 465 GLU C 258 REMARK 465 LYS C 259 REMARK 465 GLN C 260 REMARK 465 LEU C 261 REMARK 465 ALA C 262 REMARK 465 LEU C 263 REMARK 465 LYS C 264 REMARK 465 GLU C 265 REMARK 465 ALA C 266 REMARK 465 ALA C 267 REMARK 465 GLY C 268 REMARK 465 ALA C 269 REMARK 465 ALA C 270 REMARK 465 GLY C 271 REMARK 465 SER C 272 REMARK 465 GLY C 273 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO C 237 3.25 -66.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K C 301 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU C 211 O REMARK 620 2 SER C 212 O 66.5 REMARK 620 3 ASN C 214 O 70.0 74.9 REMARK 620 4 PHE C 217 O 86.6 150.5 85.1 REMARK 620 N 1 2 3 DBREF 7YZF A 1 16 PDB 7YZF 7YZF 1 16 DBREF 7YZF B 1 16 PDB 7YZF 7YZF 1 16 DBREF 7YZF C 149 273 UNP Q9Y261 FOXA2_HUMAN 149 273 SEQRES 1 A 16 DA DG DA DT DT DG DT DT DT DA DT DT DG SEQRES 2 A 16 DA DG DA SEQRES 1 B 16 DT DC DT DC DA DA DT DA DA DA DC DA DA SEQRES 2 B 16 DT DC DT SEQRES 1 C 125 LYS THR TYR ARG ARG SER TYR THR HIS ALA LYS PRO PRO SEQRES 2 C 125 TYR SER TYR ILE SER LEU ILE THR MET ALA ILE GLN GLN SEQRES 3 C 125 SER PRO ASN LYS MET LEU THR LEU SER GLU ILE TYR GLN SEQRES 4 C 125 TRP ILE MET ASP LEU PHE PRO PHE TYR ARG GLN ASN GLN SEQRES 5 C 125 GLN ARG TRP GLN ASN SER ILE ARG HIS SER LEU SER PHE SEQRES 6 C 125 ASN ASP CYS PHE LEU LYS VAL PRO ARG SER PRO ASP LYS SEQRES 7 C 125 PRO GLY LYS GLY SER PHE TRP THR LEU HIS PRO ASP SER SEQRES 8 C 125 GLY ASN MET PHE GLU ASN GLY CYS TYR LEU ARG ARG GLN SEQRES 9 C 125 LYS ARG PHE LYS CYS GLU LYS GLN LEU ALA LEU LYS GLU SEQRES 10 C 125 ALA ALA GLY ALA ALA GLY SER GLY HET K C 301 1 HETNAM K POTASSIUM ION FORMUL 4 K K 1+ FORMUL 5 HOH *5(H2 O) HELIX 1 AA1 SER C 163 SER C 175 1 13 HELIX 2 AA2 LEU C 182 PHE C 193 1 12 HELIX 3 AA3 PRO C 194 GLN C 198 5 5 HELIX 4 AA4 ASN C 199 ASN C 214 1 16 SHEET 1 AA1 3 LEU C 180 THR C 181 0 SHEET 2 AA1 3 PHE C 232 LEU C 235 -1 O TRP C 233 N LEU C 180 SHEET 3 AA1 3 PHE C 217 VAL C 220 -1 N LEU C 218 O THR C 234 LINK O LEU C 211 K K C 301 1555 1555 3.02 LINK O SER C 212 K K C 301 1555 1555 3.49 LINK O ASN C 214 K K C 301 1555 1555 3.10 LINK O PHE C 217 K K C 301 1555 1555 2.62 CRYST1 45.459 92.695 116.842 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021998 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010788 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008559 0.00000