HEADER OXIDOREDUCTASE 02-MAR-22 7Z3D TITLE XFEL STRUCTURE OF CLASS IB RIBONUCLEOTIDE REDUCTASE DIMANGANESE(II) TITLE 2 NRDF IN COMPLEX WITH OXIDIZED NRDI FROM BACILLUS CEREUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SUBUNIT BETA; COMPND 3 CHAIN: A; COMPND 4 EC: 1.17.4.1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: PROTEIN NRDI; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS CEREUS ATCC 14579; SOURCE 3 ORGANISM_TAXID: 226900; SOURCE 4 STRAIN: ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / SOURCE 5 NCIMB 9373 / NCTC 2599 / NRRL B-3711; SOURCE 6 ATCC: 14579; SOURCE 7 GENE: BC_1355; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: BACILLUS CEREUS ATCC 14579; SOURCE 12 ORGANISM_TAXID: 226900; SOURCE 13 ATCC: 14579; SOURCE 14 GENE: NRDI, A9485_05295, B4082_4779, BKK64_22520, BLD50_28200, SOURCE 15 BLX06_07420, C1N66_03050, C6A78_17740, C6Y54_16250, CJ306_07140, SOURCE 16 CN357_26430, CN553_06005, CN980_12615, COD77_14575, COI69_30475, SOURCE 17 COI98_10480, COM79_20950, CON36_20815, CON37_10850, CSW12_06330, SOURCE 18 D0437_06525, DR116_0000380, DX932_00180, E2F98_13910, F8165_13725, SOURCE 19 F8172_22390, FC692_08670, FC695_16850, FC702_30940, FORC47_1246, SOURCE 20 GE376_06770, JDS76_16260, TU58_02775, WR52_06765; SOURCE 21 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 22 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS RIBONUCLEOTIDE REDUCTASE R2B, CLASS IB RNR, FLAVOPROTEIN, KEYWDS 2 METALLOENZYME, OXIDOREDUCTASE, FERRITIN-LIKE SUPERFAMILY, KEYWDS 3 DIMANGANESE COFACTOR, XFEL EXPDTA X-RAY DIFFRACTION AUTHOR J.JOHN,H.LEBRETTE,O.AURELIUS,M.HOGBOM REVDAT 2 31-JAN-24 7Z3D 1 REMARK REVDAT 1 21-SEP-22 7Z3D 0 JRNL AUTH J.JOHN,O.AURELIUS,V.SRINIVAS,P.SAURA,I.S.KIM,A.BHOWMICK, JRNL AUTH 2 P.S.SIMON,M.DASGUPTA,C.PHAM,S.GUL,K.D.SUTHERLIN,P.ALLER, JRNL AUTH 3 A.BUTRYN,A.M.ORVILLE,M.H.CHEAH,S.OWADA,K.TONO,F.D.FULLER, JRNL AUTH 4 A.BATYUK,A.S.BREWSTER,N.K.SAUTER,V.K.YACHANDRA,J.YANO, JRNL AUTH 5 V.R.I.KAILA,J.KERN,H.LEBRETTE,M.HOGBOM JRNL TITL REDOX-CONTROLLED REORGANIZATION AND FLAVIN STRAIN WITHIN THE JRNL TITL 2 RIBONUCLEOTIDE REDUCTASE R2B-NRDI COMPLEX MONITORED BY JRNL TITL 3 SERIAL FEMTOSECOND CRYSTALLOGRAPHY. JRNL REF ELIFE V. 11 2022 JRNL REFN ESSN 2050-084X JRNL PMID 36083619 JRNL DOI 10.7554/ELIFE.79226 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.1_4122 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.17 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 38253 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1909 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.1700 - 4.8100 1.00 2732 167 0.1456 0.1784 REMARK 3 2 4.8100 - 3.8200 1.00 2666 115 0.1184 0.1465 REMARK 3 3 3.8200 - 3.3400 1.00 2625 131 0.1332 0.1506 REMARK 3 4 3.3400 - 3.0400 1.00 2596 133 0.1533 0.2029 REMARK 3 5 3.0400 - 2.8200 1.00 2608 134 0.1716 0.2216 REMARK 3 6 2.8200 - 2.6500 1.00 2599 135 0.1683 0.2162 REMARK 3 7 2.6500 - 2.5200 1.00 2607 122 0.1676 0.1997 REMARK 3 8 2.5200 - 2.4100 1.00 2559 134 0.1749 0.2169 REMARK 3 9 2.4100 - 2.3200 1.00 2596 127 0.1777 0.2383 REMARK 3 10 2.3200 - 2.2400 1.00 2568 130 0.1939 0.2336 REMARK 3 11 2.2400 - 2.1700 1.00 2574 142 0.2156 0.2502 REMARK 3 12 2.1700 - 2.1100 1.00 2551 145 0.2398 0.2671 REMARK 3 13 2.1100 - 2.0500 1.00 2531 154 0.2594 0.3123 REMARK 3 14 2.0500 - 2.0000 0.99 2532 140 0.3195 0.3334 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.480 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.45 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7Z3D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-MAR-22. REMARK 100 THE DEPOSITION ID IS D_1292118058. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-DEC-18 REMARK 200 TEMPERATURE (KELVIN) : 300 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : FREE ELECTRON LASER REMARK 200 BEAMLINE : MFX REMARK 200 X-RAY GENERATOR MODEL : SLAC LCLS BEAMLINE MFX REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.300734 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX340-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CCTBX.XFEL REMARK 200 DATA SCALING SOFTWARE : CCTBX.XFEL.MERGE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38319 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 51.590 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 66.94 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.2470 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 25.42 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.654 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4BMO REMARK 200 REMARK 200 REMARK: YELLOW RHOMBOHEDRON SHAPED CRYSTALS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MNCL2, 0.1 M SODIUM ACETATE 5.0, REMARK 280 5% PEG 6000, PH 5.0, BATCH MODE, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.49850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.49850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 30.71900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 62.81700 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 30.71900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 62.81700 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 72.49850 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 30.71900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 62.81700 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 72.49850 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 30.71900 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 62.81700 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 549 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 302 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 300 REMARK 465 GLY A 301 REMARK 465 ASN A 302 REMARK 465 GLY A 303 REMARK 465 TYR A 304 REMARK 465 VAL A 305 REMARK 465 LYS A 306 REMARK 465 ALA A 307 REMARK 465 THR A 308 REMARK 465 ASN A 309 REMARK 465 VAL A 310 REMARK 465 GLU A 311 REMARK 465 LYS A 312 REMARK 465 LEU A 313 REMARK 465 ALA A 314 REMARK 465 ASP A 315 REMARK 465 ASP A 316 REMARK 465 ASP A 317 REMARK 465 PHE A 318 REMARK 465 VAL A 319 REMARK 465 PHE A 320 REMARK 465 ASN A 321 REMARK 465 PHE A 322 REMARK 465 ALA B 117 REMARK 465 THR B 118 REMARK 465 HIS B 119 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 299 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 68 -52.53 -137.69 REMARK 500 TYR A 163 -58.27 -143.78 REMARK 500 LEU B 99 -118.02 50.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 62 OD1 REMARK 620 2 GLU A 93 OE1 92.2 REMARK 620 3 HIS A 96 ND1 125.8 97.1 REMARK 620 4 GLU A 195 OE2 117.3 130.0 96.1 REMARK 620 5 GLU A 195 OE2 131.3 73.2 102.4 56.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 401 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 93 OE2 REMARK 620 2 GLU A 161 OE1 137.6 REMARK 620 3 GLU A 161 OE1 88.7 49.9 REMARK 620 4 GLU A 161 OE2 82.9 60.5 41.6 REMARK 620 5 GLU A 161 OE2 94.4 54.7 51.5 15.1 REMARK 620 6 GLU A 195 OE1 116.4 88.9 107.3 145.6 143.6 REMARK 620 7 GLU A 195 OE1 143.2 36.6 66.8 94.3 91.1 52.8 REMARK 620 8 GLU A 195 OE2 102.7 96.8 103.2 144.6 149.4 14.6 60.3 REMARK 620 9 HIS A 198 ND1 102.7 109.0 147.8 109.4 97.2 94.5 112.6 103.4 REMARK 620 N 1 2 3 4 5 6 7 8 DBREF 7Z3D A 1 322 UNP Q81G55 Q81G55_BACCR 1 322 DBREF 7Z3D B 1 119 UNP B0YPL1 B0YPL1_BACCE 1 119 SEQRES 1 A 322 MET ARG ALA VAL ASN TRP ASN LYS LYS GLU ASP ASP PHE SEQRES 2 A 322 SER LEU MET PHE TRP LYS GLN ASN ILE ALA GLN PHE TRP SEQRES 3 A 322 THR GLU GLU GLU ILE ALA VAL SER SER ASP LYS ASN THR SEQRES 4 A 322 TRP VAL GLN LEU SER LYS GLU GLU GLN ILE ALA TYR LYS SEQRES 5 A 322 ARG VAL LEU GLY GLY LEU THR LEU LEU ASP THR LYS GLN SEQRES 6 A 322 GLY GLY GLU GLY MET PRO LEU VAL LEU VAL HIS LEU GLU SEQRES 7 A 322 ASN LEU GLN ALA LYS SER VAL LEU ALA PHE MET GLY ALA SEQRES 8 A 322 MET GLU GLU VAL HIS ALA LYS SER TYR SER HIS ILE PHE SEQRES 9 A 322 THR THR LEU ALA THR GLU GLU GLU ILE ASP ASP ILE PHE SEQRES 10 A 322 ASP TRP VAL ASP ASN HIS PRO LEU LEU GLU LYS LYS ALA SEQRES 11 A 322 GLY ILE ILE THR SER TYR TYR ARG ARG LEU LEU LYS PRO SEQRES 12 A 322 GLU VAL THR LYS LYS GLU LEU TYR MET ALA MET VAL ALA SEQRES 13 A 322 SER VAL PHE LEU GLU SER TYR LEU PHE TYR SER GLY PHE SEQRES 14 A 322 PHE TYR PRO LEU TYR LEU ALA GLY GLN GLY LYS LEU THR SEQRES 15 A 322 ALA SER GLY GLU ILE ILE ASN LEU ILE ILE ARG ASP GLU SEQRES 16 A 322 SER ILE HIS GLY VAL PHE VAL GLY ILE LEU ALA GLN GLN SEQRES 17 A 322 ILE PHE ALA GLU LEU SER ALA GLU GLU GLN GLN GLU VAL SEQRES 18 A 322 GLN LYS GLU THR GLN GLU LEU LEU MET GLU LEU TYR GLU SEQRES 19 A 322 ILE GLU MET ALA TYR THR GLU GLU ILE TYR THR SER ILE SEQRES 20 A 322 GLY LEU VAL GLU ASP VAL ASN ARG PHE VAL ARG TYR ASN SEQRES 21 A 322 ALA ASN LYS GLY LEU MET ASN LEU GLY LEU GLU PRO LYS SEQRES 22 A 322 PHE GLU GLU GLU GLU ILE ASN PRO ILE VAL LEU ASN GLY SEQRES 23 A 322 LEU ARG THR ASP THR LYS ASN HIS ASP PHE PHE SER VAL SEQRES 24 A 322 LYS GLY ASN GLY TYR VAL LYS ALA THR ASN VAL GLU LYS SEQRES 25 A 322 LEU ALA ASP ASP ASP PHE VAL PHE ASN PHE SEQRES 1 B 119 MET LEU VAL ALA TYR ASP SER MET THR GLY ASN VAL LYS SEQRES 2 B 119 ARG PHE ILE HIS LYS LEU ASN MET PRO ALA VAL GLN ILE SEQRES 3 B 119 ASP GLU ASP LEU VAL ILE ASP GLU ASP PHE ILE LEU ILE SEQRES 4 B 119 THR TYR THR THR GLY PHE GLY ASN VAL PRO GLU ARG VAL SEQRES 5 B 119 LEU ASP PHE LEU GLU ARG ASN ASN GLU LYS LEU LYS GLY SEQRES 6 B 119 VAL SER ALA SER GLY ASN ARG ASN TRP GLY ASP MET PHE SEQRES 7 B 119 GLY ALA SER ALA ASP LYS ILE SER THR LYS TYR GLU VAL SEQRES 8 B 119 PRO ILE VAL SER LYS PHE GLU LEU SER GLY THR ASN ASN SEQRES 9 B 119 ASP VAL GLU TYR PHE LYS GLU ARG VAL ARG GLU ILE ALA SEQRES 10 B 119 THR HIS HET MN A 401 1 HET MN A 402 1 HET UNX A 403 1 HET FMN B 201 31 HETNAM MN MANGANESE (II) ION HETNAM UNX UNKNOWN ATOM OR ION HETNAM FMN FLAVIN MONONUCLEOTIDE HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 3 MN 2(MN 2+) FORMUL 5 UNX X FORMUL 6 FMN C17 H21 N4 O9 P FORMUL 7 HOH *159(H2 O) HELIX 1 AA1 PHE A 13 GLN A 24 1 12 HELIX 2 AA2 THR A 27 ILE A 31 5 5 HELIX 3 AA3 VAL A 33 SER A 35 5 3 HELIX 4 AA4 ASP A 36 VAL A 41 1 6 HELIX 5 AA5 SER A 44 GLU A 68 1 25 HELIX 6 AA6 GLU A 68 LEU A 77 1 10 HELIX 7 AA7 ASN A 79 ALA A 108 1 30 HELIX 8 AA8 THR A 109 HIS A 123 1 15 HELIX 9 AA9 HIS A 123 ARG A 139 1 17 HELIX 10 AB1 THR A 146 TYR A 163 1 18 HELIX 11 AB2 PHE A 165 GLY A 177 1 13 HELIX 12 AB3 LEU A 181 LEU A 213 1 33 HELIX 13 AB4 SER A 214 THR A 245 1 32 HELIX 14 AB5 SER A 246 GLY A 248 5 3 HELIX 15 AB6 LEU A 249 LEU A 268 1 20 HELIX 16 AB7 ASN A 280 LEU A 287 1 8 HELIX 17 AB8 ARG A 288 HIS A 294 5 7 HELIX 18 AB9 GLY B 10 ASN B 20 1 11 HELIX 19 AC1 PRO B 49 ASN B 60 1 12 HELIX 20 AC2 ASN B 71 PHE B 78 5 8 HELIX 21 AC3 GLY B 79 GLU B 90 1 12 HELIX 22 AC4 THR B 102 ILE B 116 1 15 SHEET 1 AA1 5 ALA B 23 GLN B 25 0 SHEET 2 AA1 5 LEU B 2 TYR B 5 1 N VAL B 3 O VAL B 24 SHEET 3 AA1 5 PHE B 36 TYR B 41 1 O ILE B 37 N LEU B 2 SHEET 4 AA1 5 LEU B 63 GLY B 70 1 O LYS B 64 N PHE B 36 SHEET 5 AA1 5 ILE B 93 GLU B 98 1 O VAL B 94 N VAL B 66 LINK OD1 ASP A 62 MN MN A 402 1555 1555 1.98 LINK OE2 GLU A 93 MN MN A 401 1555 1555 1.96 LINK OE1 GLU A 93 MN MN A 402 1555 1555 2.00 LINK ND1 HIS A 96 MN MN A 402 1555 1555 2.20 LINK OE1AGLU A 161 MN MN A 401 1555 1555 2.13 LINK OE1BGLU A 161 MN MN A 401 1555 1555 2.76 LINK OE2AGLU A 161 MN MN A 401 1555 1555 2.21 LINK OE2BGLU A 161 MN MN A 401 1555 1555 2.08 LINK OE1AGLU A 195 MN MN A 401 1555 1555 2.24 LINK OE1BGLU A 195 MN MN A 401 1555 1555 2.27 LINK OE2BGLU A 195 MN MN A 401 1555 1555 2.08 LINK OE2AGLU A 195 MN MN A 402 1555 1555 2.02 LINK OE2BGLU A 195 MN MN A 402 1555 1555 2.39 LINK ND1 HIS A 198 MN MN A 401 1555 1555 2.11 CRYST1 61.438 125.634 144.997 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016277 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007960 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006897 0.00000