HEADER DNA BINDING PROTEIN 02-MAR-22 7Z3X TITLE CRYSTAL STRUCTURE OF FIR RRM1-2 Y115F MUTANT BOUND TO FUSE SSDNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLY(U)-BINDING-SPLICING FACTOR PUF60; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 60 KDA POLY(U)-BINDING-SPLICING FACTOR,FUSE-BINDING PROTEIN- COMPND 5 INTERACTING REPRESSOR,FBP-INTERACTING REPRESSOR,RO-BINDING PROTEIN 1, COMPND 6 ROBP1,SIAH-BINDING PROTEIN 1,SIAH-BP1; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (5'-D(P*GP*TP*())-3'); COMPND 10 CHAIN: D; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA (5'-D(*TP*TP*T)-3'); COMPND 14 CHAIN: E; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PUF60, FIR, ROBPI, SIAHBP1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_TAXID: 9606 KEYWDS RNA RECOGNITION MOTIF (RRM), SSDNA, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR X.NI,A.CHAIKUAD,S.KNAPP,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 4 07-FEB-24 7Z3X 1 REMARK REVDAT 3 11-JAN-23 7Z3X 1 COMPND SOURCE REMARK DBREF REVDAT 3 2 1 SEQADV HELIX SHEET ATOM REVDAT 2 23-NOV-22 7Z3X 1 REMARK REVDAT 1 09-NOV-22 7Z3X 0 JRNL AUTH X.NI,A.CHAIKUAD,S.KNAPP JRNL TITL CRYSTAL STRUCTURE OF FIR RRM1-2 Y115F MUTANT BOUND TO FUSE JRNL TITL 2 SSDNA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.2-4459 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 50947 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 2554 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.3800 - 4.3200 0.95 2776 149 0.1863 0.1563 REMARK 3 2 4.3200 - 3.4300 0.99 2748 153 0.1686 0.1711 REMARK 3 3 3.4300 - 3.0000 0.99 2725 154 0.2075 0.2248 REMARK 3 4 3.0000 - 2.7200 0.99 2748 118 0.2085 0.2321 REMARK 3 5 2.7200 - 2.5300 0.96 2606 141 0.2130 0.2445 REMARK 3 6 2.5300 - 2.3800 0.99 2711 135 0.2124 0.2490 REMARK 3 7 2.3800 - 2.2600 1.00 2717 132 0.2081 0.2440 REMARK 3 8 2.2600 - 2.1600 1.00 2703 135 0.1970 0.2227 REMARK 3 9 2.1600 - 2.0800 1.00 2664 140 0.2071 0.2091 REMARK 3 10 2.0800 - 2.0100 1.00 2695 144 0.2312 0.2729 REMARK 3 11 2.0100 - 1.9400 1.00 2658 161 0.2418 0.2619 REMARK 3 12 1.9400 - 1.8900 1.00 2670 154 0.2284 0.2666 REMARK 3 13 1.8900 - 1.8400 0.98 2663 119 0.2242 0.2466 REMARK 3 14 1.8400 - 1.7900 0.99 2606 156 0.2306 0.2493 REMARK 3 15 1.7900 - 1.7500 1.00 2684 135 0.2470 0.3051 REMARK 3 16 1.7500 - 1.7200 1.00 2683 145 0.2675 0.3066 REMARK 3 17 1.7200 - 1.6800 1.00 2653 149 0.3004 0.3545 REMARK 3 18 1.6800 - 1.6500 1.00 2683 134 0.3365 0.3871 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.390 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.18 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 NULL REMARK 3 ANGLE : 1.041 NULL REMARK 3 CHIRALITY : 0.059 466 REMARK 3 PLANARITY : 0.008 546 REMARK 3 DIHEDRAL : 9.207 476 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 98 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.9757 5.4810 19.7561 REMARK 3 T TENSOR REMARK 3 T11: 0.3144 T22: 0.1563 REMARK 3 T33: 0.2710 T12: -0.0447 REMARK 3 T13: -0.0060 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 5.5478 L22: 6.3879 REMARK 3 L33: 8.6800 L12: 1.9078 REMARK 3 L13: -3.6084 L23: -3.4852 REMARK 3 S TENSOR REMARK 3 S11: -0.0516 S12: 0.0252 S13: 0.3395 REMARK 3 S21: -0.5342 S22: 0.1128 S23: -0.3758 REMARK 3 S31: -0.1246 S32: 0.3285 S33: -0.0898 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 112 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.8553 -1.1321 42.8833 REMARK 3 T TENSOR REMARK 3 T11: 0.2862 T22: 0.3009 REMARK 3 T33: 0.2080 T12: 0.0854 REMARK 3 T13: 0.0195 T23: -0.0301 REMARK 3 L TENSOR REMARK 3 L11: 1.9354 L22: 3.1725 REMARK 3 L33: 2.8696 L12: 0.3181 REMARK 3 L13: 1.1158 L23: 0.3610 REMARK 3 S TENSOR REMARK 3 S11: -0.0274 S12: -0.4688 S13: 0.2481 REMARK 3 S21: 0.3801 S22: 0.0571 S23: 0.1355 REMARK 3 S31: -0.3794 S32: -0.6445 S33: -0.0783 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 156 THROUGH 173 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.0484 -6.0067 32.0902 REMARK 3 T TENSOR REMARK 3 T11: 0.1790 T22: 0.1683 REMARK 3 T33: 0.1497 T12: 0.0287 REMARK 3 T13: -0.0101 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 5.5182 L22: 2.4399 REMARK 3 L33: 6.3192 L12: 0.3283 REMARK 3 L13: -2.1061 L23: -1.7831 REMARK 3 S TENSOR REMARK 3 S11: -0.0913 S12: -0.1035 S13: 0.1739 REMARK 3 S21: 0.0085 S22: 0.0379 S23: -0.0969 REMARK 3 S31: -0.1623 S32: -0.1379 S33: 0.0872 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 174 THROUGH 196 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.7938 -5.2310 32.8674 REMARK 3 T TENSOR REMARK 3 T11: 0.1655 T22: 0.2412 REMARK 3 T33: 0.1890 T12: 0.0217 REMARK 3 T13: 0.0109 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 1.7279 L22: 3.5099 REMARK 3 L33: 9.2942 L12: 0.8073 REMARK 3 L13: -0.6138 L23: -3.0702 REMARK 3 S TENSOR REMARK 3 S11: -0.0684 S12: -0.1911 S13: 0.0447 REMARK 3 S21: 0.2750 S22: 0.1984 S23: 0.1942 REMARK 3 S31: -0.1610 S32: -0.9031 S33: -0.1619 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 197 THROUGH 207 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.0943 -5.9154 14.3087 REMARK 3 T TENSOR REMARK 3 T11: 0.3138 T22: 0.2062 REMARK 3 T33: 0.1513 T12: 0.0010 REMARK 3 T13: -0.0098 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 9.3021 L22: 8.2619 REMARK 3 L33: 6.0855 L12: -6.3032 REMARK 3 L13: -0.4180 L23: -0.0619 REMARK 3 S TENSOR REMARK 3 S11: 0.5413 S12: 0.8422 S13: -0.0231 REMARK 3 S21: -1.1809 S22: -0.3301 S23: 0.1605 REMARK 3 S31: 0.1245 S32: 0.2089 S33: -0.1595 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 208 THROUGH 280 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.8703 -15.4362 29.0899 REMARK 3 T TENSOR REMARK 3 T11: 0.1338 T22: 0.1798 REMARK 3 T33: 0.2230 T12: 0.0465 REMARK 3 T13: -0.0027 T23: 0.0228 REMARK 3 L TENSOR REMARK 3 L11: 3.2737 L22: 5.6683 REMARK 3 L33: 5.0334 L12: -0.5925 REMARK 3 L13: -0.8436 L23: -0.3429 REMARK 3 S TENSOR REMARK 3 S11: 0.0171 S12: -0.0219 S13: 0.1852 REMARK 3 S21: 0.0001 S22: -0.1261 S23: -0.5640 REMARK 3 S31: 0.0497 S32: 0.5791 S33: 0.0649 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 281 THROUGH 291 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.3825 -9.6245 23.0557 REMARK 3 T TENSOR REMARK 3 T11: 0.1921 T22: 0.1866 REMARK 3 T33: 0.2187 T12: 0.0109 REMARK 3 T13: 0.0225 T23: -0.0004 REMARK 3 L TENSOR REMARK 3 L11: 4.3775 L22: 6.4274 REMARK 3 L33: 3.5269 L12: -1.6557 REMARK 3 L13: 1.5895 L23: -0.9348 REMARK 3 S TENSOR REMARK 3 S11: -0.0992 S12: 0.4023 S13: 0.2592 REMARK 3 S21: 0.0634 S22: 0.0716 S23: -0.5621 REMARK 3 S31: -0.2857 S32: 0.1582 S33: 0.2671 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 99 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.2317 -1.1822 8.2369 REMARK 3 T TENSOR REMARK 3 T11: 0.3210 T22: 0.6297 REMARK 3 T33: 0.5666 T12: -0.0351 REMARK 3 T13: -0.0972 T23: 0.2794 REMARK 3 L TENSOR REMARK 3 L11: 5.5136 L22: 0.6978 REMARK 3 L33: 1.1704 L12: -0.0768 REMARK 3 L13: -0.2703 L23: 0.8969 REMARK 3 S TENSOR REMARK 3 S11: 0.1026 S12: 0.2210 S13: -0.4130 REMARK 3 S21: -0.1086 S22: 0.3649 S23: 0.9111 REMARK 3 S31: 0.0359 S32: -0.8641 S33: -0.2207 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 118 THROUGH 191 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.3735 4.7794 7.1351 REMARK 3 T TENSOR REMARK 3 T11: 0.1949 T22: 0.1778 REMARK 3 T33: 0.1850 T12: 0.0111 REMARK 3 T13: -0.0105 T23: 0.0137 REMARK 3 L TENSOR REMARK 3 L11: 1.8587 L22: 4.7184 REMARK 3 L33: 5.0305 L12: -1.1351 REMARK 3 L13: 0.9786 L23: -3.5277 REMARK 3 S TENSOR REMARK 3 S11: -0.0037 S12: -0.1361 S13: -0.0662 REMARK 3 S21: 0.0126 S22: 0.2369 S23: 0.2736 REMARK 3 S31: -0.1268 S32: -0.2298 S33: -0.1574 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 192 THROUGH 208 ) REMARK 3 ORIGIN FOR THE GROUP (A): -40.6816 -4.3969 19.0608 REMARK 3 T TENSOR REMARK 3 T11: 0.3081 T22: 0.6257 REMARK 3 T33: 0.7326 T12: 0.0248 REMARK 3 T13: 0.0985 T23: 0.2032 REMARK 3 L TENSOR REMARK 3 L11: 0.2634 L22: 4.8436 REMARK 3 L33: 3.4653 L12: 1.1062 REMARK 3 L13: -0.1986 L23: -1.1717 REMARK 3 S TENSOR REMARK 3 S11: 0.0711 S12: -0.4320 S13: -0.0774 REMARK 3 S21: 0.2126 S22: -0.0419 S23: 0.9283 REMARK 3 S31: -0.4996 S32: -0.0535 S33: -0.0702 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 209 THROUGH 289 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.6283 -15.7567 19.2307 REMARK 3 T TENSOR REMARK 3 T11: 0.3101 T22: 0.5415 REMARK 3 T33: 0.5050 T12: 0.0666 REMARK 3 T13: 0.0226 T23: 0.2764 REMARK 3 L TENSOR REMARK 3 L11: 4.3503 L22: 3.0478 REMARK 3 L33: 1.1127 L12: -0.0179 REMARK 3 L13: -0.7750 L23: -1.1377 REMARK 3 S TENSOR REMARK 3 S11: -0.5350 S12: -1.1073 S13: -1.2855 REMARK 3 S21: 0.0781 S22: 0.6562 S23: 0.3310 REMARK 3 S31: 0.4453 S32: -0.1827 S33: 0.0538 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 3 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.3791 1.5531 35.6201 REMARK 3 T TENSOR REMARK 3 T11: 0.5406 T22: 0.7485 REMARK 3 T33: 0.4526 T12: 0.1832 REMARK 3 T13: -0.0047 T23: 0.0659 REMARK 3 L TENSOR REMARK 3 L11: 2.7913 L22: 3.0363 REMARK 3 L33: 3.5741 L12: 0.0796 REMARK 3 L13: -1.9285 L23: -2.6432 REMARK 3 S TENSOR REMARK 3 S11: 0.7062 S12: 0.0062 S13: 0.6044 REMARK 3 S21: -0.2494 S22: -0.1689 S23: 1.1140 REMARK 3 S31: -1.0123 S32: -1.8271 S33: -0.3997 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 0 THROUGH 2 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.8938 11.8699 5.2408 REMARK 3 T TENSOR REMARK 3 T11: 0.5083 T22: 0.6470 REMARK 3 T33: 0.6032 T12: 0.1268 REMARK 3 T13: -0.0744 T23: 0.1968 REMARK 3 L TENSOR REMARK 3 L11: 6.7738 L22: 7.4171 REMARK 3 L33: 6.2956 L12: 4.3704 REMARK 3 L13: -2.8485 L23: 1.3519 REMARK 3 S TENSOR REMARK 3 S11: -0.5126 S12: 0.6538 S13: 0.6970 REMARK 3 S21: -1.0315 S22: 0.8930 S23: 1.3542 REMARK 3 S31: -0.3984 S32: -0.8975 S33: -0.4766 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7Z3X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-MAR-22. REMARK 100 THE DEPOSITION ID IS D_1292121477. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.999998 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50994 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 49.380 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2QFJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG3350 0.1M BIS-TRIS, PH5.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.80650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.67650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.19300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.67650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.80650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.19300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 95 REMARK 465 MET A 96 REMARK 465 SER B 95 REMARK 465 MET B 96 REMARK 465 MET B 290 REMARK 465 PRO B 291 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 97 CG CD1 CD2 REMARK 470 MET A 100 CG SD CE REMARK 470 GLN A 103 CG CD OE1 NE2 REMARK 470 ASP A 142 CG OD1 OD2 REMARK 470 TRP A 145 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 145 CZ3 CH2 REMARK 470 SER A 147 OG REMARK 470 VAL A 148 CG1 CG2 REMARK 470 THR A 149 OG1 CG2 REMARK 470 MET A 150 CG SD CE REMARK 470 LYS A 151 CG CD CE NZ REMARK 470 LYS A 184 CG CD CE NZ REMARK 470 GLN A 218 CG CD OE1 NE2 REMARK 470 LYS A 234 CG CD CE NZ REMARK 470 THR A 245 OG1 CG2 REMARK 470 THR A 246 OG1 CG2 REMARK 470 LYS A 248 CG CD CE NZ REMARK 470 LYS A 284 CG CD CE NZ REMARK 470 LEU B 97 CG CD1 CD2 REMARK 470 GLN B 98 CG CD OE1 NE2 REMARK 470 GLN B 105 CG CD OE1 NE2 REMARK 470 ARG B 106 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 139 CG CD CE NZ REMARK 470 GLY B 154 O REMARK 470 SER B 175 OG REMARK 470 LYS B 184 CG CD CE NZ REMARK 470 ASN B 190 CG OD1 ND2 REMARK 470 ILE B 191 CG1 CG2 CD1 REMARK 470 GLN B 193 CG CD OE1 NE2 REMARK 470 GLN B 218 CG CD OE1 NE2 REMARK 470 ASP B 223 CG OD1 OD2 REMARK 470 LYS B 226 CG CD CE NZ REMARK 470 LYS B 234 CG CD CE NZ REMARK 470 LYS B 236 CG CD CE NZ REMARK 470 THR B 245 OG1 CG2 REMARK 470 LYS B 248 CG CD CE NZ REMARK 470 GLU B 258 CG CD OE1 OE2 REMARK 470 LYS B 259 CG CD CE NZ REMARK 470 GLN B 264 CG CD OE1 NE2 REMARK 470 LYS B 284 CG CD CE NZ REMARK 470 DT D 3 C5' C4' O4' C3' O3' C2' C1' REMARK 470 DT D 3 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT D 3 C7 C6 REMARK 470 DT E 0 O5' C5' C4' O4' C3' C2' C1' REMARK 470 DT E 0 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT E 0 C7 C6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 209 74.36 -105.07 REMARK 500 THR A 246 -32.47 67.28 REMARK 500 REMARK 500 REMARK: NULL DBREF 7Z3X A 97 291 UNP Q9UHX1 PUF60_HUMAN 114 308 DBREF 7Z3X B 97 291 UNP Q9UHX1 PUF60_HUMAN 114 308 DBREF 7Z3X D 1 3 PDB 7Z3X 7Z3X 1 3 DBREF 7Z3X E 0 2 PDB 7Z3X 7Z3X 0 2 SEQADV 7Z3X SER A 95 UNP Q9UHX1 EXPRESSION TAG SEQADV 7Z3X MET A 96 UNP Q9UHX1 EXPRESSION TAG SEQADV 7Z3X PHE A 115 UNP Q9UHX1 TYR 132 ENGINEERED MUTATION SEQADV 7Z3X SER B 95 UNP Q9UHX1 EXPRESSION TAG SEQADV 7Z3X MET B 96 UNP Q9UHX1 EXPRESSION TAG SEQADV 7Z3X PHE B 115 UNP Q9UHX1 TYR 132 ENGINEERED MUTATION SEQRES 1 A 197 SER MET LEU GLN SER MET ALA ALA GLN ARG GLN ARG ALA SEQRES 2 A 197 LEU ALA ILE MET CYS ARG VAL PHE VAL GLY SER ILE TYR SEQRES 3 A 197 TYR GLU LEU GLY GLU ASP THR ILE ARG GLN ALA PHE ALA SEQRES 4 A 197 PRO PHE GLY PRO ILE LYS SER ILE ASP MET SER TRP ASP SEQRES 5 A 197 SER VAL THR MET LYS HIS LYS GLY PHE ALA PHE VAL GLU SEQRES 6 A 197 TYR GLU VAL PRO GLU ALA ALA GLN LEU ALA LEU GLU GLN SEQRES 7 A 197 MET ASN SER VAL MET LEU GLY GLY ARG ASN ILE LYS VAL SEQRES 8 A 197 GLY ARG PRO SER ASN ILE GLY GLN ALA GLN PRO ILE ILE SEQRES 9 A 197 ASP GLN LEU ALA GLU GLU ALA ARG ALA PHE ASN ARG ILE SEQRES 10 A 197 TYR VAL ALA SER VAL HIS GLN ASP LEU SER ASP ASP ASP SEQRES 11 A 197 ILE LYS SER VAL PHE GLU ALA PHE GLY LYS ILE LYS SER SEQRES 12 A 197 CYS THR LEU ALA ARG ASP PRO THR THR GLY LYS HIS LYS SEQRES 13 A 197 GLY TYR GLY PHE ILE GLU TYR GLU LYS ALA GLN SER SER SEQRES 14 A 197 GLN ASP ALA VAL SER SER MET ASN LEU PHE ASP LEU GLY SEQRES 15 A 197 GLY GLN TYR LEU ARG VAL GLY LYS ALA VAL THR PRO PRO SEQRES 16 A 197 MET PRO SEQRES 1 B 197 SER MET LEU GLN SER MET ALA ALA GLN ARG GLN ARG ALA SEQRES 2 B 197 LEU ALA ILE MET CYS ARG VAL PHE VAL GLY SER ILE TYR SEQRES 3 B 197 TYR GLU LEU GLY GLU ASP THR ILE ARG GLN ALA PHE ALA SEQRES 4 B 197 PRO PHE GLY PRO ILE LYS SER ILE ASP MET SER TRP ASP SEQRES 5 B 197 SER VAL THR MET LYS HIS LYS GLY PHE ALA PHE VAL GLU SEQRES 6 B 197 TYR GLU VAL PRO GLU ALA ALA GLN LEU ALA LEU GLU GLN SEQRES 7 B 197 MET ASN SER VAL MET LEU GLY GLY ARG ASN ILE LYS VAL SEQRES 8 B 197 GLY ARG PRO SER ASN ILE GLY GLN ALA GLN PRO ILE ILE SEQRES 9 B 197 ASP GLN LEU ALA GLU GLU ALA ARG ALA PHE ASN ARG ILE SEQRES 10 B 197 TYR VAL ALA SER VAL HIS GLN ASP LEU SER ASP ASP ASP SEQRES 11 B 197 ILE LYS SER VAL PHE GLU ALA PHE GLY LYS ILE LYS SER SEQRES 12 B 197 CYS THR LEU ALA ARG ASP PRO THR THR GLY LYS HIS LYS SEQRES 13 B 197 GLY TYR GLY PHE ILE GLU TYR GLU LYS ALA GLN SER SER SEQRES 14 B 197 GLN ASP ALA VAL SER SER MET ASN LEU PHE ASP LEU GLY SEQRES 15 B 197 GLY GLN TYR LEU ARG VAL GLY LYS ALA VAL THR PRO PRO SEQRES 16 B 197 MET PRO SEQRES 1 D 3 DG DT DT SEQRES 1 E 3 DT DT DT HET EDO A 301 4 HET EDO A 302 4 HET EDO B 301 4 HET EDO B 302 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 5 EDO 4(C2 H6 O2) FORMUL 9 HOH *177(H2 O) HELIX 1 AA1 LEU A 97 CYS A 112 1 16 HELIX 2 AA2 GLY A 124 ALA A 133 1 10 HELIX 3 AA3 PRO A 134 GLY A 136 5 3 HELIX 4 AA4 VAL A 162 ASN A 174 1 13 HELIX 5 AA5 ASN A 190 GLN A 195 5 6 HELIX 6 AA6 PRO A 196 ARG A 206 1 11 HELIX 7 AA7 SER A 221 GLU A 230 1 10 HELIX 8 AA8 ALA A 231 GLY A 233 5 3 HELIX 9 AA9 LYS A 259 MET A 270 1 12 HELIX 10 AB1 GLN B 98 CYS B 112 1 15 HELIX 11 AB2 GLY B 124 ALA B 133 1 10 HELIX 12 AB3 PRO B 134 GLY B 136 5 3 HELIX 13 AB4 VAL B 162 MET B 173 1 12 HELIX 14 AB5 ALA B 194 ARG B 206 1 13 HELIX 15 AB6 SER B 221 GLU B 230 1 10 HELIX 16 AB7 ALA B 231 GLY B 233 5 3 HELIX 17 AB8 LYS B 259 ASN B 271 1 13 SHEET 1 AA1 4 ILE A 138 MET A 143 0 SHEET 2 AA1 4 ALA A 156 TYR A 160 -1 O GLU A 159 N LYS A 139 SHEET 3 AA1 4 ARG A 113 GLY A 117 -1 N VAL A 116 O ALA A 156 SHEET 4 AA1 4 LYS A 184 GLY A 186 -1 O LYS A 184 N GLY A 117 SHEET 1 AA2 2 MET A 177 LEU A 178 0 SHEET 2 AA2 2 ARG A 181 ASN A 182 -1 O ARG A 181 N LEU A 178 SHEET 1 AA3 4 ILE A 235 ARG A 242 0 SHEET 2 AA3 4 HIS A 249 TYR A 257 -1 O LYS A 250 N ALA A 241 SHEET 3 AA3 4 ASN A 209 ALA A 214 -1 N ASN A 209 O TYR A 257 SHEET 4 AA3 4 ARG A 281 LYS A 284 -1 O GLY A 283 N TYR A 212 SHEET 1 AA4 2 ASP A 274 LEU A 275 0 SHEET 2 AA4 2 GLN A 278 TYR A 279 -1 O GLN A 278 N LEU A 275 SHEET 1 AA5 4 ILE B 138 MET B 143 0 SHEET 2 AA5 4 ALA B 156 TYR B 160 -1 O GLU B 159 N LYS B 139 SHEET 3 AA5 4 ARG B 113 GLY B 117 -1 N VAL B 116 O ALA B 156 SHEET 4 AA5 4 LYS B 184 GLY B 186 -1 O LYS B 184 N GLY B 117 SHEET 1 AA6 2 MET B 177 LEU B 178 0 SHEET 2 AA6 2 ARG B 181 ASN B 182 -1 O ARG B 181 N LEU B 178 SHEET 1 AA7 5 ILE B 235 ARG B 242 0 SHEET 2 AA7 5 HIS B 249 TYR B 257 -1 O TYR B 252 N ALA B 241 SHEET 3 AA7 5 ARG B 210 ALA B 214 -1 N ILE B 211 O ILE B 255 SHEET 4 AA7 5 GLN B 278 LYS B 284 -1 O GLY B 283 N TYR B 212 SHEET 5 AA7 5 PHE B 273 LEU B 275 -1 N PHE B 273 O LEU B 280 CISPEP 1 GLN A 195 PRO A 196 0 0.16 CRYST1 55.613 70.386 107.353 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017981 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014207 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009315 0.00000