HEADER TRANSFERASE 04-MAR-22 7Z4N TITLE PLASMODIUM FALCIPARUM PYRUVATE KINASE COMPLEXED WITH PYRUVATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PYRUVATE KINASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.1.40; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM 3D7; SOURCE 3 ORGANISM_TAXID: 36329; SOURCE 4 STRAIN: ISOLATE 3D7; SOURCE 5 GENE: PF3D7_0626800; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS REDOX REGULATION, GLYCOLYSIS, MALARIA, DRUG-TARGET, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.DILLENBERGER,S.RAHLFS,K.BECKER,K.FRITZ-WOLF REVDAT 5 01-MAY-24 7Z4N 1 REMARK REVDAT 4 15-NOV-23 7Z4N 1 LINK ATOM REVDAT 3 19-OCT-22 7Z4N 1 JRNL REVDAT 2 07-SEP-22 7Z4N 1 JRNL REVDAT 1 24-AUG-22 7Z4N 0 JRNL AUTH M.DILLENBERGER,S.RAHLFS,K.BECKER,K.FRITZ-WOLF JRNL TITL PROMINENT ROLE OF CYSTEINE RESIDUES C49 AND C343 IN JRNL TITL 2 REGULATING PLASMODIUM FALCIPARUM PYRUVATE KINASE ACTIVITY. JRNL REF STRUCTURE V. 30 1452 2022 JRNL REFN ISSN 0969-2126 JRNL PMID 35998635 JRNL DOI 10.1016/J.STR.2022.08.001 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 53959 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3237 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 5.1200 - 4.0600 0.94 2179 139 0.1769 0.2453 REMARK 3 2 4.0600 - 3.5500 0.95 2179 140 0.1757 0.1788 REMARK 3 3 3.5500 - 3.2200 0.97 2209 141 0.1892 0.2226 REMARK 3 4 3.2200 - 2.9900 0.97 2208 141 0.1820 0.2210 REMARK 3 5 2.9900 - 2.8200 0.98 2217 141 0.1916 0.2400 REMARK 3 6 2.8200 - 2.6800 0.98 2217 142 0.1943 0.2415 REMARK 3 7 2.6800 - 2.5600 0.98 2214 141 0.1849 0.2196 REMARK 3 8 2.5600 - 2.4600 0.99 2233 142 0.1997 0.2336 REMARK 3 9 2.4600 - 2.3800 0.99 2220 142 0.2003 0.2375 REMARK 3 10 2.3800 - 2.3000 0.99 2233 143 0.2098 0.2798 REMARK 3 11 2.3000 - 2.2400 0.98 2194 140 0.2188 0.3043 REMARK 3 12 2.2400 - 2.1800 0.98 2203 140 0.2271 0.2574 REMARK 3 13 2.1800 - 2.1200 0.98 2199 141 0.2239 0.2506 REMARK 3 14 2.1200 - 2.0800 0.98 2203 140 0.2273 0.3041 REMARK 3 15 2.0800 - 2.0300 0.99 2189 139 0.2341 0.3141 REMARK 3 16 2.0300 - 1.9900 0.99 2222 142 0.2582 0.3460 REMARK 3 17 1.9900 - 1.9500 0.99 2217 141 0.2676 0.3961 REMARK 3 18 1.9500 - 1.9200 0.99 2214 142 0.3076 0.3253 REMARK 3 19 1.9200 - 1.8900 0.99 2209 141 0.3447 0.4263 REMARK 3 20 1.8900 - 1.8600 0.98 2178 139 0.4093 0.4736 REMARK 3 21 1.8600 - 1.8300 0.98 2165 138 0.4624 0.4768 REMARK 3 22 1.8300 - 1.8000 0.98 2196 140 0.5209 0.5406 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.338 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.184 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.23 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 3920 REMARK 3 ANGLE : 1.353 5266 REMARK 3 CHIRALITY : 0.078 632 REMARK 3 PLANARITY : 0.010 663 REMARK 3 DIHEDRAL : 28.450 568 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7Z4N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-MAR-22. REMARK 100 THE DEPOSITION ID IS D_1292121480. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-AUG-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53978 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 36.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.05970 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: D_1292121472 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES, PH 6.5, 50 MM KCL, 10 MM REMARK 280 MGCL2 AND 14-24% PEG 600, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 39.94500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 56.20000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 65.98500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 39.94500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 56.20000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 65.98500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 39.94500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 56.20000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 65.98500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 39.94500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 56.20000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 65.98500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 33120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 70320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 131.97000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 131.97000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 743 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 796 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 811 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 PHE A 4 REMARK 465 LYS A 5 REMARK 465 TYR A 6 REMARK 465 LYS A 7 REMARK 465 ASN A 8 REMARK 465 SER A 9 REMARK 465 ALA A 10 REMARK 465 ILE A 494 REMARK 465 LYS A 495 REMARK 465 GLU A 496 REMARK 465 GLU A 497 REMARK 465 VAL A 498 REMARK 465 SER A 499 REMARK 465 GLY A 500 REMARK 465 GLY A 501 REMARK 465 HIS A 514 REMARK 465 HIS A 515 REMARK 465 HIS A 516 REMARK 465 HIS A 517 REMARK 465 HIS A 518 REMARK 465 HIS A 519 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 162 C1 PEG A 607 1.38 REMARK 500 NZ LYS A 267 O HOH A 701 1.93 REMARK 500 O HOH A 736 O HOH A 842 1.96 REMARK 500 O HOH A 724 O HOH A 788 1.98 REMARK 500 O GLN A 16 O HOH A 702 1.99 REMARK 500 O HOH A 735 O HOH A 758 2.02 REMARK 500 O HOH A 719 O HOH A 729 2.05 REMARK 500 O HOH A 708 O HOH A 783 2.06 REMARK 500 OD1 ASP A 442 NZ LYS A 458 2.08 REMARK 500 O HOH A 784 O HOH A 831 2.09 REMARK 500 OD1 ASP A 466 O HOH A 703 2.12 REMARK 500 NH1 ARG A 240 O1 GOL A 616 2.16 REMARK 500 O HOH A 724 O HOH A 778 2.17 REMARK 500 O HOH A 844 O HOH A 847 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU A 171 NE2 GLN A 463 7545 1.87 REMARK 500 OE2 GLU A 403 OE2 GLU A 403 3556 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 95 79.81 -103.95 REMARK 500 LYS A 116 -26.46 68.61 REMARK 500 PHE A 216 -59.25 -124.50 REMARK 500 GLU A 257 26.19 -150.48 REMARK 500 THR A 313 118.53 94.05 REMARK 500 SER A 347 -96.09 -119.99 REMARK 500 ASN A 503 11.41 -145.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 602 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 69 OD1 REMARK 620 2 SER A 71 OG 75.0 REMARK 620 3 ASP A 102 OD1 98.5 169.8 REMARK 620 4 THR A 103 O 127.3 103.3 74.1 REMARK 620 5 HOH A 781 O 141.4 69.7 118.5 77.0 REMARK 620 6 HOH A 833 O 89.9 95.8 92.0 141.3 78.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 257 OE2 REMARK 620 2 ASP A 281 OD2 98.7 REMARK 620 3 PYR A 603 O 91.6 92.7 REMARK 620 4 PYR A 603 O3 94.1 163.1 75.9 REMARK 620 5 HOH A 737 O 168.5 81.1 100.0 88.5 REMARK 620 6 HOH A 776 O 83.7 106.5 160.7 85.7 85.3 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7Z4M RELATED DB: PDB REMARK 900 THIS ENTRY IS THE SAME PROTEIN COMPLEXED WITH K+ AND MG2+ REMARK 900 RELATED ID: 7Z4Q RELATED DB: PDB REMARK 900 THIS ENTRY IS THE SAME PROTEIN WITH C49 MUTATED TO A REMARK 900 RELATED ID: 7Z4R RELATED DB: PDB REMARK 900 THIS ENTRY IS THE SAME PROTEIN WITH RESIDUE C343 MUTATED TO A DBREF 7Z4N A 1 511 UNP C6KTA4 C6KTA4_PLAF7 1 511 SEQADV 7Z4N LEU A 512 UNP C6KTA4 EXPRESSION TAG SEQADV 7Z4N GLU A 513 UNP C6KTA4 EXPRESSION TAG SEQADV 7Z4N HIS A 514 UNP C6KTA4 EXPRESSION TAG SEQADV 7Z4N HIS A 515 UNP C6KTA4 EXPRESSION TAG SEQADV 7Z4N HIS A 516 UNP C6KTA4 EXPRESSION TAG SEQADV 7Z4N HIS A 517 UNP C6KTA4 EXPRESSION TAG SEQADV 7Z4N HIS A 518 UNP C6KTA4 EXPRESSION TAG SEQADV 7Z4N HIS A 519 UNP C6KTA4 EXPRESSION TAG SEQRES 1 A 519 MET SER SER PHE LYS TYR LYS ASN SER ALA ALA GLY ALA SEQRES 2 A 519 SER MET GLN SER ALA ALA ASN ILE THR LEU ARG GLN ILE SEQRES 3 A 519 LEU GLU PRO ASN ASN VAL ASN LEU ARG SER LYS LYS THR SEQRES 4 A 519 HIS ILE VAL CYS THR LEU GLY PRO ALA CYS LYS SER VAL SEQRES 5 A 519 GLU THR LEU VAL LYS LEU ILE ASP ALA GLY MET ASP ILE SEQRES 6 A 519 CYS ARG PHE ASN PHE SER HIS GLY SER HIS GLU ASP HIS SEQRES 7 A 519 LYS GLU MET PHE ASN ASN VAL LEU LYS ALA GLN GLU LEU SEQRES 8 A 519 ARG PRO ASN CYS LEU LEU GLY MET LEU LEU ASP THR LYS SEQRES 9 A 519 GLY PRO GLU ILE ARG THR GLY PHE LEU LYS ASN LYS GLU SEQRES 10 A 519 VAL HIS LEU LYS GLU GLY SER LYS LEU LYS LEU VAL THR SEQRES 11 A 519 ASP TYR GLU PHE LEU GLY ASP GLU THR CYS ILE ALA CYS SEQRES 12 A 519 SER TYR LYS LYS LEU PRO GLN SER VAL LYS PRO GLY ASN SEQRES 13 A 519 ILE ILE LEU ILE ALA ASP GLY SER VAL SER CYS LYS VAL SEQRES 14 A 519 LEU GLU THR HIS GLU ASP HIS VAL ILE THR GLU VAL LEU SEQRES 15 A 519 ASN SER ALA VAL ILE GLY GLU ARG LYS ASN MET ASN LEU SEQRES 16 A 519 PRO ASN VAL LYS VAL ASP LEU PRO ILE ILE SER GLU LYS SEQRES 17 A 519 ASP LYS ASN ASP ILE LEU ASN PHE ALA ILE PRO MET GLY SEQRES 18 A 519 CYS ASN PHE ILE ALA ALA SER PHE ILE GLN SER ALA ASP SEQRES 19 A 519 ASP VAL ARG LEU ILE ARG ASN LEU LEU GLY PRO ARG GLY SEQRES 20 A 519 ARG HIS ILE LYS ILE ILE PRO LYS ILE GLU ASN ILE GLU SEQRES 21 A 519 GLY ILE ILE HIS PHE ASP LYS ILE LEU ALA GLU SER ASP SEQRES 22 A 519 GLY ILE MET ILE ALA ARG GLY ASP LEU GLY MET GLU ILE SEQRES 23 A 519 SER PRO GLU LYS VAL PHE LEU ALA GLN LYS LEU MET ILE SEQRES 24 A 519 SER LYS CYS ASN LEU GLN GLY LYS PRO ILE ILE THR ALA SEQRES 25 A 519 THR GLN MET LEU GLU SER MET THR LYS ASN PRO ARG PRO SEQRES 26 A 519 THR ARG ALA GLU VAL THR ASP VAL ALA ASN ALA VAL LEU SEQRES 27 A 519 ASP GLY THR ASP CYS VAL MET LEU SER GLY GLU THR ALA SEQRES 28 A 519 GLY GLY LYS PHE PRO VAL GLU ALA VAL THR ILE MET SER SEQRES 29 A 519 LYS ILE CYS LEU GLU ALA GLU ALA CYS ILE ASP TYR LYS SEQRES 30 A 519 LEU LEU TYR GLN SER LEU VAL ASN ALA ILE GLU THR PRO SEQRES 31 A 519 ILE SER VAL GLN GLU ALA VAL ALA ARG SER ALA VAL GLU SEQRES 32 A 519 THR ALA GLU SER ILE GLN ALA SER LEU ILE ILE ALA LEU SEQRES 33 A 519 THR GLU THR GLY TYR THR ALA ARG LEU ILE ALA LYS TYR SEQRES 34 A 519 LYS PRO SER CYS THR ILE LEU ALA LEU SER ALA SER ASP SEQRES 35 A 519 SER THR VAL LYS CYS LEU ASN VAL HIS ARG GLY VAL THR SEQRES 36 A 519 CYS ILE LYS VAL GLY SER PHE GLN GLY THR ASP ILE VAL SEQRES 37 A 519 ILE ARG ASN ALA ILE GLU ILE ALA LYS GLN ARG ASN MET SEQRES 38 A 519 ALA LYS VAL GLY ASP SER VAL ILE ALA ILE HIS GLY ILE SEQRES 39 A 519 LYS GLU GLU VAL SER GLY GLY THR ASN LEU MET LYS VAL SEQRES 40 A 519 VAL GLN ILE GLU LEU GLU HIS HIS HIS HIS HIS HIS HET MG A 601 1 HET K A 602 1 HET PYR A 603 6 HET PEG A 604 7 HET PEG A 605 7 HET GOL A 606 6 HET PEG A 607 7 HET PEG A 608 7 HET PEG A 609 7 HET PEG A 610 7 HET PEG A 611 7 HET GOL A 612 6 HET GOL A 613 6 HET GOL A 614 6 HET GOL A 615 6 HET GOL A 616 6 HET MES A 617 12 HETNAM MG MAGNESIUM ION HETNAM K POTASSIUM ION HETNAM PYR PYRUVIC ACID HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM GOL GLYCEROL HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 MG MG 2+ FORMUL 3 K K 1+ FORMUL 4 PYR C3 H4 O3 FORMUL 5 PEG 7(C4 H10 O3) FORMUL 7 GOL 6(C3 H8 O3) FORMUL 18 MES C6 H13 N O4 S FORMUL 19 HOH *161(H2 O) HELIX 1 AA1 THR A 22 GLU A 28 1 7 HELIX 2 AA2 ASN A 33 LYS A 37 5 5 HELIX 3 AA3 GLY A 46 LYS A 50 5 5 HELIX 4 AA4 SER A 51 GLY A 62 1 12 HELIX 5 AA5 SER A 74 ARG A 92 1 19 HELIX 6 AA6 LYS A 147 VAL A 152 1 6 HELIX 7 AA7 SER A 206 PHE A 216 1 11 HELIX 8 AA8 PHE A 216 GLY A 221 1 6 HELIX 9 AA9 SER A 232 GLY A 244 1 13 HELIX 10 AB1 ASN A 258 HIS A 264 1 7 HELIX 11 AB2 HIS A 264 SER A 272 1 9 HELIX 12 AB3 ARG A 279 ILE A 286 1 8 HELIX 13 AB4 SER A 287 GLU A 289 5 3 HELIX 14 AB5 LYS A 290 GLY A 306 1 17 HELIX 15 AB6 LEU A 316 LYS A 321 5 6 HELIX 16 AB7 THR A 326 GLY A 340 1 15 HELIX 17 AB8 SER A 347 GLY A 352 1 6 HELIX 18 AB9 PHE A 355 ILE A 374 1 20 HELIX 19 AC1 ASP A 375 ALA A 386 1 12 HELIX 20 AC2 SER A 392 GLN A 409 1 18 HELIX 21 AC3 GLY A 420 TYR A 429 1 10 HELIX 22 AC4 SER A 441 LEU A 448 1 8 HELIX 23 AC5 ASN A 449 HIS A 451 5 3 HELIX 24 AC6 GLY A 464 ARG A 479 1 16 SHEET 1 AA1 9 HIS A 40 THR A 44 0 SHEET 2 AA1 9 MET A 63 ASN A 69 1 O ARG A 67 N CYS A 43 SHEET 3 AA1 9 GLY A 98 ASP A 102 1 O LEU A 100 N PHE A 68 SHEET 4 AA1 9 PHE A 224 ALA A 227 1 O ALA A 226 N LEU A 101 SHEET 5 AA1 9 LYS A 251 ILE A 256 1 O ILE A 253 N ILE A 225 SHEET 6 AA1 9 ILE A 275 ALA A 278 1 O MET A 276 N PRO A 254 SHEET 7 AA1 9 ILE A 309 ALA A 312 1 O ILE A 310 N ILE A 277 SHEET 8 AA1 9 CYS A 343 LEU A 346 1 O CYS A 343 N THR A 311 SHEET 9 AA1 9 HIS A 40 THR A 44 1 N VAL A 42 O VAL A 344 SHEET 1 AA2 2 VAL A 118 LEU A 120 0 SHEET 2 AA2 2 ALA A 185 ILE A 187 -1 O ILE A 187 N VAL A 118 SHEET 1 AA3 6 CYS A 140 ALA A 142 0 SHEET 2 AA3 6 LYS A 125 VAL A 129 1 N LYS A 127 O ILE A 141 SHEET 3 AA3 6 HIS A 176 VAL A 181 -1 O THR A 179 N LEU A 126 SHEET 4 AA3 6 VAL A 165 VAL A 169 -1 N LYS A 168 O GLU A 180 SHEET 5 AA3 6 ILE A 157 ILE A 160 -1 N ILE A 158 O CYS A 167 SHEET 6 AA3 6 MET A 193 ASN A 194 -1 O ASN A 194 N LEU A 159 SHEET 1 AA4 5 VAL A 454 LYS A 458 0 SHEET 2 AA4 5 THR A 434 SER A 439 1 N ILE A 435 O THR A 455 SHEET 3 AA4 5 LEU A 412 LEU A 416 1 N ALA A 415 O LEU A 438 SHEET 4 AA4 5 SER A 487 HIS A 492 1 O ILE A 489 N ILE A 414 SHEET 5 AA4 5 LEU A 504 GLN A 509 -1 O VAL A 508 N VAL A 488 LINK OD1 ASN A 69 K K A 602 1555 1555 2.66 LINK OG SER A 71 K K A 602 1555 1555 2.61 LINK OD1 ASP A 102 K K A 602 1555 1555 2.64 LINK O THR A 103 K K A 602 1555 1555 2.79 LINK OE2 GLU A 257 MG MG A 601 1555 1555 2.07 LINK OD2 ASP A 281 MG MG A 601 1555 1555 1.92 LINK MG MG A 601 O PYR A 603 1555 1555 2.16 LINK MG MG A 601 O3 PYR A 603 1555 1555 2.34 LINK MG MG A 601 O HOH A 737 1555 1555 2.12 LINK MG MG A 601 O HOH A 776 1555 1555 2.20 LINK K K A 602 O HOH A 781 1555 1555 3.12 LINK K K A 602 O HOH A 833 1555 1555 3.14 CISPEP 1 THR A 389 PRO A 390 0 -2.32 CRYST1 79.890 112.400 131.970 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012517 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008897 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007577 0.00000