data_7Z5I # _entry.id 7Z5I # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7Z5I pdb_00007z5i 10.2210/pdb7z5i/pdb WWPDB D_1292121600 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-03-22 2 'Structure model' 1 1 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' pdbx_initial_refinement_model 4 2 'Structure model' struct_ncs_dom_lim # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 2 2 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 3 2 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 4 2 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 5 2 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 6 2 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 7 2 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 8 2 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7Z5I _pdbx_database_status.recvd_initial_deposition_date 2022-03-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email ajt208@cam.ac.uk _pdbx_contact_author.name_first Jussi _pdbx_contact_author.name_last Taipale _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-4204-0951 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Morgunova, E.' 1 0000-0002-7754-9021 'Popov, A.' 2 0000-0002-3058-8912 'Yin, Y.' 3 0000-0002-5454-608X 'Taipale, J.' 4 0000-0003-4204-0951 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Transcription factor MYF5 bound to symmetrical site' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Morgunova, E.' 1 0000-0002-7754-9021 primary 'Popov, A.' 2 0000-0002-3058-8912 primary 'Yin, Y.' 3 0000-0002-5454-608X primary 'Taipale, J.' 4 0000-0003-4204-0951 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Myogenic factor 5' 6774.927 2 ? ? ? ? 2 polymer syn ;DNA (5'-D(P*GP*CP*GP*CP*GP*TP*CP*AP*GP*CP*TP*GP*AP*CP*GP*CP*GP*T)-3') ; 5533.566 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(P*AP*CP*GP*CP*GP*TP*CP*AP*GP*CP*TP*GP*AP*CP*GP*CP*GP*C)-3') ; 5502.556 1 ? ? ? ? 4 water nat water 18.015 3 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Myf-5,Class C basic helix-loop-helix protein 2,bHLHc2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no SMDRRKAATMRERRRLKKVNQAFETLKRCTTTNPNQRLPKVEILRNAIRYIESLQE SMDRRKAATMRERRRLKKVNQAFETLKRCTTTNPNQRLPKVEILRNAIRYIESLQE A,B ? 2 polydeoxyribonucleotide no no '(DG)(DC)(DG)(DC)(DG)(DT)(DC)(DA)(DG)(DC)(DT)(DG)(DA)(DC)(DG)(DC)(DG)(DT)' GCGCGTCAGCTGACGCGT E ? 3 polydeoxyribonucleotide no no '(DA)(DC)(DG)(DC)(DG)(DT)(DC)(DA)(DG)(DC)(DT)(DG)(DA)(DC)(DG)(DC)(DG)(DC)' ACGCGTCAGCTGACGCGC F ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 ASP n 1 4 ARG n 1 5 ARG n 1 6 LYS n 1 7 ALA n 1 8 ALA n 1 9 THR n 1 10 MET n 1 11 ARG n 1 12 GLU n 1 13 ARG n 1 14 ARG n 1 15 ARG n 1 16 LEU n 1 17 LYS n 1 18 LYS n 1 19 VAL n 1 20 ASN n 1 21 GLN n 1 22 ALA n 1 23 PHE n 1 24 GLU n 1 25 THR n 1 26 LEU n 1 27 LYS n 1 28 ARG n 1 29 CYS n 1 30 THR n 1 31 THR n 1 32 THR n 1 33 ASN n 1 34 PRO n 1 35 ASN n 1 36 GLN n 1 37 ARG n 1 38 LEU n 1 39 PRO n 1 40 LYS n 1 41 VAL n 1 42 GLU n 1 43 ILE n 1 44 LEU n 1 45 ARG n 1 46 ASN n 1 47 ALA n 1 48 ILE n 1 49 ARG n 1 50 TYR n 1 51 ILE n 1 52 GLU n 1 53 SER n 1 54 LEU n 1 55 GLN n 1 56 GLU n 2 1 DG n 2 2 DC n 2 3 DG n 2 4 DC n 2 5 DG n 2 6 DT n 2 7 DC n 2 8 DA n 2 9 DG n 2 10 DC n 2 11 DT n 2 12 DG n 2 13 DA n 2 14 DC n 2 15 DG n 2 16 DC n 2 17 DG n 2 18 DT n 3 1 DA n 3 2 DC n 3 3 DG n 3 4 DC n 3 5 DG n 3 6 DT n 3 7 DC n 3 8 DA n 3 9 DG n 3 10 DC n 3 11 DT n 3 12 DG n 3 13 DA n 3 14 DC n 3 15 DG n 3 16 DC n 3 17 DG n 3 18 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 56 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'MYF5, BHLHC2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 18 'Homo sapiens' Human 9606 ? 3 1 sample 1 18 'Homo sapiens' Human 9606 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 81 81 SER SER A . n A 1 2 MET 2 82 82 MET MET A . n A 1 3 ASP 3 83 83 ASP ASP A . n A 1 4 ARG 4 84 84 ARG ARG A . n A 1 5 ARG 5 85 85 ARG ARG A . n A 1 6 LYS 6 86 86 LYS LYS A . n A 1 7 ALA 7 87 87 ALA ALA A . n A 1 8 ALA 8 88 88 ALA ALA A . n A 1 9 THR 9 89 89 THR THR A . n A 1 10 MET 10 90 90 MET MET A . n A 1 11 ARG 11 91 91 ARG ARG A . n A 1 12 GLU 12 92 92 GLU GLU A . n A 1 13 ARG 13 93 93 ARG ARG A . n A 1 14 ARG 14 94 94 ARG ARG A . n A 1 15 ARG 15 95 95 ARG ARG A . n A 1 16 LEU 16 96 96 LEU LEU A . n A 1 17 LYS 17 97 97 LYS LYS A . n A 1 18 LYS 18 98 98 LYS LYS A . n A 1 19 VAL 19 99 99 VAL VAL A . n A 1 20 ASN 20 100 100 ASN ASN A . n A 1 21 GLN 21 101 101 GLN GLN A . n A 1 22 ALA 22 102 102 ALA ALA A . n A 1 23 PHE 23 103 103 PHE PHE A . n A 1 24 GLU 24 104 104 GLU GLU A . n A 1 25 THR 25 105 105 THR THR A . n A 1 26 LEU 26 106 106 LEU LEU A . n A 1 27 LYS 27 107 107 LYS LYS A . n A 1 28 ARG 28 108 108 ARG ARG A . n A 1 29 CYS 29 109 109 CYS CYS A . n A 1 30 THR 30 110 110 THR THR A . n A 1 31 THR 31 111 111 THR THR A . n A 1 32 THR 32 112 112 THR THR A . n A 1 33 ASN 33 113 113 ASN ASN A . n A 1 34 PRO 34 114 114 PRO PRO A . n A 1 35 ASN 35 115 115 ASN ASN A . n A 1 36 GLN 36 116 116 GLN GLN A . n A 1 37 ARG 37 117 117 ARG ARG A . n A 1 38 LEU 38 118 118 LEU LEU A . n A 1 39 PRO 39 119 119 PRO PRO A . n A 1 40 LYS 40 120 120 LYS LYS A . n A 1 41 VAL 41 121 121 VAL VAL A . n A 1 42 GLU 42 122 122 GLU GLU A . n A 1 43 ILE 43 123 123 ILE ILE A . n A 1 44 LEU 44 124 124 LEU LEU A . n A 1 45 ARG 45 125 125 ARG ARG A . n A 1 46 ASN 46 126 126 ASN ASN A . n A 1 47 ALA 47 127 127 ALA ALA A . n A 1 48 ILE 48 128 128 ILE ILE A . n A 1 49 ARG 49 129 129 ARG ARG A . n A 1 50 TYR 50 130 130 TYR TYR A . n A 1 51 ILE 51 131 131 ILE ILE A . n A 1 52 GLU 52 132 132 GLU GLU A . n A 1 53 SER 53 133 133 SER SER A . n A 1 54 LEU 54 134 134 LEU LEU A . n A 1 55 GLN 55 135 135 GLN GLN A . n A 1 56 GLU 56 136 136 GLU GLU A . n B 1 1 SER 1 81 81 SER SER B . n B 1 2 MET 2 82 82 MET MET B . n B 1 3 ASP 3 83 83 ASP ASP B . n B 1 4 ARG 4 84 84 ARG ARG B . n B 1 5 ARG 5 85 85 ARG ARG B . n B 1 6 LYS 6 86 86 LYS LYS B . n B 1 7 ALA 7 87 87 ALA ALA B . n B 1 8 ALA 8 88 88 ALA ALA B . n B 1 9 THR 9 89 89 THR THR B . n B 1 10 MET 10 90 90 MET MET B . n B 1 11 ARG 11 91 91 ARG ARG B . n B 1 12 GLU 12 92 92 GLU GLU B . n B 1 13 ARG 13 93 93 ARG ARG B . n B 1 14 ARG 14 94 94 ARG ARG B . n B 1 15 ARG 15 95 95 ARG ARG B . n B 1 16 LEU 16 96 96 LEU LEU B . n B 1 17 LYS 17 97 97 LYS LYS B . n B 1 18 LYS 18 98 98 LYS LYS B . n B 1 19 VAL 19 99 99 VAL VAL B . n B 1 20 ASN 20 100 100 ASN ASN B . n B 1 21 GLN 21 101 101 GLN GLN B . n B 1 22 ALA 22 102 102 ALA ALA B . n B 1 23 PHE 23 103 103 PHE PHE B . n B 1 24 GLU 24 104 104 GLU GLU B . n B 1 25 THR 25 105 105 THR THR B . n B 1 26 LEU 26 106 106 LEU LEU B . n B 1 27 LYS 27 107 107 LYS LYS B . n B 1 28 ARG 28 108 108 ARG ARG B . n B 1 29 CYS 29 109 109 CYS CYS B . n B 1 30 THR 30 110 110 THR THR B . n B 1 31 THR 31 111 111 THR THR B . n B 1 32 THR 32 112 112 THR THR B . n B 1 33 ASN 33 113 113 ASN ASN B . n B 1 34 PRO 34 114 114 PRO PRO B . n B 1 35 ASN 35 115 115 ASN ASN B . n B 1 36 GLN 36 116 116 GLN GLN B . n B 1 37 ARG 37 117 117 ARG ARG B . n B 1 38 LEU 38 118 118 LEU LEU B . n B 1 39 PRO 39 119 119 PRO PRO B . n B 1 40 LYS 40 120 120 LYS LYS B . n B 1 41 VAL 41 121 121 VAL VAL B . n B 1 42 GLU 42 122 122 GLU GLU B . n B 1 43 ILE 43 123 123 ILE ILE B . n B 1 44 LEU 44 124 124 LEU LEU B . n B 1 45 ARG 45 125 125 ARG ARG B . n B 1 46 ASN 46 126 126 ASN ASN B . n B 1 47 ALA 47 127 127 ALA ALA B . n B 1 48 ILE 48 128 128 ILE ILE B . n B 1 49 ARG 49 129 129 ARG ARG B . n B 1 50 TYR 50 130 130 TYR TYR B . n B 1 51 ILE 51 131 131 ILE ILE B . n B 1 52 GLU 52 132 132 GLU GLU B . n B 1 53 SER 53 133 133 SER SER B . n B 1 54 LEU 54 134 134 LEU LEU B . n B 1 55 GLN 55 135 135 GLN GLN B . n B 1 56 GLU 56 136 136 GLU GLU B . n C 2 1 DG 1 1 1 DG DG E . n C 2 2 DC 2 2 2 DC DC E . n C 2 3 DG 3 3 3 DG DG E . n C 2 4 DC 4 4 4 DC DC E . n C 2 5 DG 5 5 5 DG DG E . n C 2 6 DT 6 6 6 DT DT E . n C 2 7 DC 7 7 7 DC DC E . n C 2 8 DA 8 8 8 DA DA E . n C 2 9 DG 9 9 9 DG DG E . n C 2 10 DC 10 10 10 DC DC E . n C 2 11 DT 11 11 11 DT DT E . n C 2 12 DG 12 12 12 DG DG E . n C 2 13 DA 13 13 13 DA DA E . n C 2 14 DC 14 14 14 DC DC E . n C 2 15 DG 15 15 15 DG DG E . n C 2 16 DC 16 16 16 DC DC E . n C 2 17 DG 17 17 17 DG DG E . n C 2 18 DT 18 18 18 DT DT E . n D 3 1 DA 1 1 1 DA DA F . n D 3 2 DC 2 2 2 DC DC F . n D 3 3 DG 3 3 3 DG DG F . n D 3 4 DC 4 4 4 DC DC F . n D 3 5 DG 5 5 5 DG DG F . n D 3 6 DT 6 6 6 DT DT F . n D 3 7 DC 7 7 7 DC DC F . n D 3 8 DA 8 8 8 DA DA F . n D 3 9 DG 9 9 9 DG DG F . n D 3 10 DC 10 10 10 DC DC F . n D 3 11 DT 11 11 11 DT DT F . n D 3 12 DG 12 12 12 DG DG F . n D 3 13 DA 13 13 13 DA DA F . n D 3 14 DC 14 14 14 DC DC F . n D 3 15 DG 15 15 15 DG DG F . n D 3 16 DC 16 16 16 DC DC F . n D 3 17 DG 17 17 17 DG DG F . n D 3 18 DC 18 18 18 DC DC F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 HOH 1 201 7 HOH HOH A . E 4 HOH 2 202 21 HOH HOH A . F 4 HOH 1 201 25 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0257 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 91.040 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7Z5I _cell.details ? _cell.formula_units_Z ? _cell.length_a 166.700 _cell.length_a_esd ? _cell.length_b 33.923 _cell.length_b_esd ? _cell.length_c 53.729 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Z5I _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7Z5I _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.09 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 60.18 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'PME 3350, 2% MPD, 0.05M Sodium Acetate, pH 4.5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-04-09 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.972 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID23-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.972 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID23-1 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7Z5I _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.996 _reflns.d_resolution_low 83.336 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all 5721 _reflns.number_obs 5721 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 91.300 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 2.800 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.067 _reflns.pdbx_netI_over_av_sigmaI 1.800 _reflns.pdbx_netI_over_sigmaI 6.900 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.083 _reflns.pdbx_Rpim_I_all 0.047 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 15911 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 3.000 3.160 ? 0.800 2253 ? ? ? 839 92.000 ? ? ? ? 0.912 ? ? ? ? ? ? ? ? 2.700 0.912 ? ? 1.200 1.119 0.638 ? 1 1 ? ? ? ? ? ? ? ? ? ? ? 3.160 3.350 ? 2.100 2220 ? ? ? 799 92.100 ? ? ? ? 0.369 ? ? ? ? ? ? ? ? 2.800 0.369 ? ? 2.700 0.450 0.253 ? 2 1 ? ? ? ? ? ? ? ? ? ? ? 3.350 3.580 ? 3.000 2083 ? ? ? 721 92.100 ? ? ? ? 0.244 ? ? ? ? ? ? ? ? 2.900 0.244 ? ? 3.500 0.298 0.168 ? 3 1 ? ? ? ? ? ? ? ? ? ? ? 3.580 3.870 ? 3.400 1906 ? ? ? 697 92.200 ? ? ? ? 0.216 ? ? ? ? ? ? ? ? 2.700 0.216 ? ? 4.700 0.265 0.151 ? 4 1 ? ? ? ? ? ? ? ? ? ? ? 3.870 4.240 ? 6.600 1777 ? ? ? 644 91.800 ? ? ? ? 0.103 ? ? ? ? ? ? ? ? 2.800 0.103 ? ? 7.700 0.126 0.071 ? 5 1 ? ? ? ? ? ? ? ? ? ? ? 4.240 4.740 ? 7.300 1620 ? ? ? 559 91.200 ? ? ? ? 0.086 ? ? ? ? ? ? ? ? 2.900 0.086 ? ? 9.000 0.105 0.059 ? 6 1 ? ? ? ? ? ? ? ? ? ? ? 4.740 5.470 ? 9.600 1369 ? ? ? 503 90.300 ? ? ? ? 0.065 ? ? ? ? ? ? ? ? 2.700 0.065 ? ? 10.200 0.081 0.046 ? 7 1 ? ? ? ? ? ? ? ? ? ? ? 5.470 6.700 ? 10.100 1272 ? ? ? 440 90.300 ? ? ? ? 0.058 ? ? ? ? ? ? ? ? 2.900 0.058 ? ? 12.400 0.071 0.040 ? 8 1 ? ? ? ? ? ? ? ? ? ? ? 6.700 9.480 ? 10.700 900 ? ? ? 322 87.600 ? ? ? ? 0.042 ? ? ? ? ? ? ? ? 2.800 0.042 ? ? 16.600 0.051 0.030 ? 9 1 ? ? ? ? ? ? ? ? ? ? ? 9.480 53.720 ? 5.100 511 ? ? ? 197 87.300 ? ? ? ? 0.036 ? ? ? ? ? ? ? ? 2.600 0.036 ? ? 22.000 0.044 0.025 ? 10 1 ? ? ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] 10.3600 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -8.3500 _refine.aniso_B[2][2] -3.5600 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -6.5000 _refine.B_iso_max 235.810 _refine.B_iso_mean 99.0190 _refine.B_iso_min 55.050 _refine.correlation_coeff_Fo_to_Fc 0.9650 _refine.correlation_coeff_Fo_to_Fc_free 0.9340 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7Z5I _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.0000 _refine.ls_d_res_low 53.3400 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 5157 _refine.ls_number_reflns_R_free 560 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 90.5000 _refine.ls_percent_reflns_R_free 9.8000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2332 _refine.ls_R_factor_R_free 0.2876 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2272 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1MDY _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.5270 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 27.9900 _refine.overall_SU_ML 0.4690 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 3.0000 _refine_hist.d_res_low 53.3400 _refine_hist.number_atoms_solvent 3 _refine_hist.number_atoms_total 1683 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 148 _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent 89.90 _refine_hist.pdbx_number_atoms_protein 942 _refine_hist.pdbx_number_atoms_nucleic_acid 738 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.015 0.012 1774 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.004 0.018 1365 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.477 1.430 2532 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.471 2.016 3169 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 7.026 5.000 110 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 29.402 18.000 70 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 24.741 15.000 210 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 19.762 15.000 20 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.093 0.200 236 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.012 0.020 1468 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 420 ? r_gen_planes_other ? ? # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight _refine_ls_restr_ncs.pdbx_ens_id 'X-RAY DIFFRACTION' 1 ? ? 0.150 ? 0.050 1 'interatomic distance' ? A 1702 ? ? 1 'X-RAY DIFFRACTION' 2 ? ? 0.150 ? 0.050 2 'interatomic distance' ? B 1702 ? ? 1 'X-RAY DIFFRACTION' 1 ? ? 0.090 ? 0.050 3 'interatomic distance' ? E 1587 ? ? 2 'X-RAY DIFFRACTION' 2 ? ? 0.090 ? 0.050 4 'interatomic distance' ? F 1587 ? ? 2 # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 3.000 _refine_ls_shell.d_res_low 3.0740 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 35 _refine_ls_shell.number_reflns_R_work 390 _refine_ls_shell.percent_reflns_obs 91.0100 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.5530 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.4660 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B 2 1 E 2 2 F # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 0 A SER 1 . A GLU 56 . A SER 81 A GLU 136 0 ? 1 2 0 B SER 1 . B GLU 56 . B SER 81 B GLU 136 0 ? 2 1 0 C DG 1 . C DT 18 . E DG 1 E DT 18 0 ? 2 2 0 D DA 1 . D DC 18 . F DA 1 F DC 18 0 ? # loop_ _struct_ncs_ens.id _struct_ncs_ens.details 1 ? 2 ? # _struct.entry_id 7Z5I _struct.title 'Transcription factor MYF5 bound to symmetrical site' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7Z5I _struct_keywords.text 'DNA-binding domain, transcription factor, complex with DNA, TRANSCRIPTION' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP MYF5_HUMAN P13349 ? 1 MDRRKAATMRERRRLKKVNQAFETLKRCTTTNPNQRLPKVEILRNAIRYIESLQE 82 2 PDB 7Z5I 7Z5I ? 2 ? 1 3 PDB 7Z5I 7Z5I ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7Z5I A 2 ? 56 ? P13349 82 ? 136 ? 82 136 2 1 7Z5I B 2 ? 56 ? P13349 82 ? 136 ? 82 136 3 2 7Z5I E 1 ? 18 ? 7Z5I 1 ? 18 ? 1 18 4 3 7Z5I F 1 ? 18 ? 7Z5I 1 ? 18 ? 1 18 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7Z5I SER A 1 ? UNP P13349 ? ? 'expression tag' 81 1 2 7Z5I SER B 1 ? UNP P13349 ? ? 'expression tag' 81 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6470 ? 1 MORE -54 ? 1 'SSA (A^2)' 12460 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 1 ? THR A 31 ? SER A 81 THR A 111 1 ? 31 HELX_P HELX_P2 AA2 PRO A 39 ? GLU A 56 ? PRO A 119 GLU A 136 1 ? 18 HELX_P HELX_P3 AA3 MET B 2 ? THR B 30 ? MET B 82 THR B 110 1 ? 29 HELX_P HELX_P4 AA4 PRO B 39 ? GLU B 56 ? PRO B 119 GLU B 136 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C DG 1 N1 ? ? ? 1_555 D DC 18 N3 ? ? E DG 1 F DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DG 1 N2 ? ? ? 1_555 D DC 18 O2 ? ? E DG 1 F DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DG 1 O6 ? ? ? 1_555 D DC 18 N4 ? ? E DG 1 F DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 17 N1 ? ? E DC 2 F DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 17 O6 ? ? E DC 2 F DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 17 N2 ? ? E DC 2 F DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DG 3 N1 ? ? ? 1_555 D DC 16 N3 ? ? E DG 3 F DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DG 3 N2 ? ? ? 1_555 D DC 16 O2 ? ? E DG 3 F DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DG 3 O6 ? ? ? 1_555 D DC 16 N4 ? ? E DG 3 F DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DC 4 N3 ? ? ? 1_555 D DG 15 N1 ? ? E DC 4 F DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DC 4 N4 ? ? ? 1_555 D DG 15 O6 ? ? E DC 4 F DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DC 4 O2 ? ? ? 1_555 D DG 15 N2 ? ? E DC 4 F DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DG 5 N1 ? ? ? 1_555 D DC 14 N3 ? ? E DG 5 F DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DG 5 N2 ? ? ? 1_555 D DC 14 O2 ? ? E DG 5 F DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DG 5 O6 ? ? ? 1_555 D DC 14 N4 ? ? E DG 5 F DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DT 6 N3 ? ? ? 1_555 D DA 13 N1 ? ? E DT 6 F DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DT 6 O4 ? ? ? 1_555 D DA 13 N6 ? ? E DT 6 F DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DC 7 N3 ? ? ? 1_555 D DG 12 N1 ? ? E DC 7 F DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DC 7 N4 ? ? ? 1_555 D DG 12 O6 ? ? E DC 7 F DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DC 7 O2 ? ? ? 1_555 D DG 12 N2 ? ? E DC 7 F DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DA 8 N1 ? ? ? 1_555 D DT 11 N3 ? ? E DA 8 F DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DA 8 N6 ? ? ? 1_555 D DT 11 O4 ? ? E DA 8 F DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DG 9 N1 ? ? ? 1_555 D DC 10 N3 ? ? E DG 9 F DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DG 9 N2 ? ? ? 1_555 D DC 10 O2 ? ? E DG 9 F DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DG 9 O6 ? ? ? 1_555 D DC 10 N4 ? ? E DG 9 F DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DC 10 N3 ? ? ? 1_555 D DG 9 N1 ? ? E DC 10 F DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DC 10 N4 ? ? ? 1_555 D DG 9 O6 ? ? E DC 10 F DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DC 10 O2 ? ? ? 1_555 D DG 9 N2 ? ? E DC 10 F DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DT 11 N3 ? ? ? 1_555 D DA 8 N1 ? ? E DT 11 F DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DT 11 O4 ? ? ? 1_555 D DA 8 N6 ? ? E DT 11 F DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DG 12 N1 ? ? ? 1_555 D DC 7 N3 ? ? E DG 12 F DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DG 12 N2 ? ? ? 1_555 D DC 7 O2 ? ? E DG 12 F DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DG 12 O6 ? ? ? 1_555 D DC 7 N4 ? ? E DG 12 F DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DA 13 N1 ? ? ? 1_555 D DT 6 N3 ? ? E DA 13 F DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DA 13 N6 ? ? ? 1_555 D DT 6 O4 ? ? E DA 13 F DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DC 14 N3 ? ? ? 1_555 D DG 5 N1 ? ? E DC 14 F DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DC 14 N4 ? ? ? 1_555 D DG 5 O6 ? ? E DC 14 F DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DC 14 O2 ? ? ? 1_555 D DG 5 N2 ? ? E DC 14 F DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DG 15 N1 ? ? ? 1_555 D DC 4 N3 ? ? E DG 15 F DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DG 15 N2 ? ? ? 1_555 D DC 4 O2 ? ? E DG 15 F DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DG 15 O6 ? ? ? 1_555 D DC 4 N4 ? ? E DG 15 F DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DC 16 N3 ? ? ? 1_555 D DG 3 N1 ? ? E DC 16 F DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DC 16 N4 ? ? ? 1_555 D DG 3 O6 ? ? E DC 16 F DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C DC 16 O2 ? ? ? 1_555 D DG 3 N2 ? ? E DC 16 F DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C DG 17 N1 ? ? ? 1_555 D DC 2 N3 ? ? E DG 17 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C DG 17 N2 ? ? ? 1_555 D DC 2 O2 ? ? E DG 17 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C DG 17 O6 ? ? ? 1_555 D DC 2 N4 ? ? E DG 17 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? C DT 18 N3 ? ? ? 1_555 D DA 1 N1 ? ? E DT 18 F DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? C DT 18 O4 ? ? ? 1_555 D DA 1 N6 ? ? E DT 18 F DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NH2 _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 ARG _pdbx_validate_close_contact.auth_seq_id_1 85 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OP2 _pdbx_validate_close_contact.auth_asym_id_2 E _pdbx_validate_close_contact.auth_comp_id_2 DT _pdbx_validate_close_contact.auth_seq_id_2 11 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.14 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 117 ? ? -111.68 73.06 2 1 THR B 112 ? ? 157.05 -26.59 3 1 ASN B 113 ? ? 161.10 84.59 4 1 ARG B 117 ? ? -114.08 72.09 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 HOH O O N N 270 HOH H1 H N N 271 HOH H2 H N N 272 ILE N N N N 273 ILE CA C N S 274 ILE C C N N 275 ILE O O N N 276 ILE CB C N S 277 ILE CG1 C N N 278 ILE CG2 C N N 279 ILE CD1 C N N 280 ILE OXT O N N 281 ILE H H N N 282 ILE H2 H N N 283 ILE HA H N N 284 ILE HB H N N 285 ILE HG12 H N N 286 ILE HG13 H N N 287 ILE HG21 H N N 288 ILE HG22 H N N 289 ILE HG23 H N N 290 ILE HD11 H N N 291 ILE HD12 H N N 292 ILE HD13 H N N 293 ILE HXT H N N 294 LEU N N N N 295 LEU CA C N S 296 LEU C C N N 297 LEU O O N N 298 LEU CB C N N 299 LEU CG C N N 300 LEU CD1 C N N 301 LEU CD2 C N N 302 LEU OXT O N N 303 LEU H H N N 304 LEU H2 H N N 305 LEU HA H N N 306 LEU HB2 H N N 307 LEU HB3 H N N 308 LEU HG H N N 309 LEU HD11 H N N 310 LEU HD12 H N N 311 LEU HD13 H N N 312 LEU HD21 H N N 313 LEU HD22 H N N 314 LEU HD23 H N N 315 LEU HXT H N N 316 LYS N N N N 317 LYS CA C N S 318 LYS C C N N 319 LYS O O N N 320 LYS CB C N N 321 LYS CG C N N 322 LYS CD C N N 323 LYS CE C N N 324 LYS NZ N N N 325 LYS OXT O N N 326 LYS H H N N 327 LYS H2 H N N 328 LYS HA H N N 329 LYS HB2 H N N 330 LYS HB3 H N N 331 LYS HG2 H N N 332 LYS HG3 H N N 333 LYS HD2 H N N 334 LYS HD3 H N N 335 LYS HE2 H N N 336 LYS HE3 H N N 337 LYS HZ1 H N N 338 LYS HZ2 H N N 339 LYS HZ3 H N N 340 LYS HXT H N N 341 MET N N N N 342 MET CA C N S 343 MET C C N N 344 MET O O N N 345 MET CB C N N 346 MET CG C N N 347 MET SD S N N 348 MET CE C N N 349 MET OXT O N N 350 MET H H N N 351 MET H2 H N N 352 MET HA H N N 353 MET HB2 H N N 354 MET HB3 H N N 355 MET HG2 H N N 356 MET HG3 H N N 357 MET HE1 H N N 358 MET HE2 H N N 359 MET HE3 H N N 360 MET HXT H N N 361 PHE N N N N 362 PHE CA C N S 363 PHE C C N N 364 PHE O O N N 365 PHE CB C N N 366 PHE CG C Y N 367 PHE CD1 C Y N 368 PHE CD2 C Y N 369 PHE CE1 C Y N 370 PHE CE2 C Y N 371 PHE CZ C Y N 372 PHE OXT O N N 373 PHE H H N N 374 PHE H2 H N N 375 PHE HA H N N 376 PHE HB2 H N N 377 PHE HB3 H N N 378 PHE HD1 H N N 379 PHE HD2 H N N 380 PHE HE1 H N N 381 PHE HE2 H N N 382 PHE HZ H N N 383 PHE HXT H N N 384 PRO N N N N 385 PRO CA C N S 386 PRO C C N N 387 PRO O O N N 388 PRO CB C N N 389 PRO CG C N N 390 PRO CD C N N 391 PRO OXT O N N 392 PRO H H N N 393 PRO HA H N N 394 PRO HB2 H N N 395 PRO HB3 H N N 396 PRO HG2 H N N 397 PRO HG3 H N N 398 PRO HD2 H N N 399 PRO HD3 H N N 400 PRO HXT H N N 401 SER N N N N 402 SER CA C N S 403 SER C C N N 404 SER O O N N 405 SER CB C N N 406 SER OG O N N 407 SER OXT O N N 408 SER H H N N 409 SER H2 H N N 410 SER HA H N N 411 SER HB2 H N N 412 SER HB3 H N N 413 SER HG H N N 414 SER HXT H N N 415 THR N N N N 416 THR CA C N S 417 THR C C N N 418 THR O O N N 419 THR CB C N R 420 THR OG1 O N N 421 THR CG2 C N N 422 THR OXT O N N 423 THR H H N N 424 THR H2 H N N 425 THR HA H N N 426 THR HB H N N 427 THR HG1 H N N 428 THR HG21 H N N 429 THR HG22 H N N 430 THR HG23 H N N 431 THR HXT H N N 432 TYR N N N N 433 TYR CA C N S 434 TYR C C N N 435 TYR O O N N 436 TYR CB C N N 437 TYR CG C Y N 438 TYR CD1 C Y N 439 TYR CD2 C Y N 440 TYR CE1 C Y N 441 TYR CE2 C Y N 442 TYR CZ C Y N 443 TYR OH O N N 444 TYR OXT O N N 445 TYR H H N N 446 TYR H2 H N N 447 TYR HA H N N 448 TYR HB2 H N N 449 TYR HB3 H N N 450 TYR HD1 H N N 451 TYR HD2 H N N 452 TYR HE1 H N N 453 TYR HE2 H N N 454 TYR HH H N N 455 TYR HXT H N N 456 VAL N N N N 457 VAL CA C N S 458 VAL C C N N 459 VAL O O N N 460 VAL CB C N N 461 VAL CG1 C N N 462 VAL CG2 C N N 463 VAL OXT O N N 464 VAL H H N N 465 VAL H2 H N N 466 VAL HA H N N 467 VAL HB H N N 468 VAL HG11 H N N 469 VAL HG12 H N N 470 VAL HG13 H N N 471 VAL HG21 H N N 472 VAL HG22 H N N 473 VAL HG23 H N N 474 VAL HXT H N N 475 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 HOH O H1 sing N N 269 HOH O H2 sing N N 270 ILE N CA sing N N 271 ILE N H sing N N 272 ILE N H2 sing N N 273 ILE CA C sing N N 274 ILE CA CB sing N N 275 ILE CA HA sing N N 276 ILE C O doub N N 277 ILE C OXT sing N N 278 ILE CB CG1 sing N N 279 ILE CB CG2 sing N N 280 ILE CB HB sing N N 281 ILE CG1 CD1 sing N N 282 ILE CG1 HG12 sing N N 283 ILE CG1 HG13 sing N N 284 ILE CG2 HG21 sing N N 285 ILE CG2 HG22 sing N N 286 ILE CG2 HG23 sing N N 287 ILE CD1 HD11 sing N N 288 ILE CD1 HD12 sing N N 289 ILE CD1 HD13 sing N N 290 ILE OXT HXT sing N N 291 LEU N CA sing N N 292 LEU N H sing N N 293 LEU N H2 sing N N 294 LEU CA C sing N N 295 LEU CA CB sing N N 296 LEU CA HA sing N N 297 LEU C O doub N N 298 LEU C OXT sing N N 299 LEU CB CG sing N N 300 LEU CB HB2 sing N N 301 LEU CB HB3 sing N N 302 LEU CG CD1 sing N N 303 LEU CG CD2 sing N N 304 LEU CG HG sing N N 305 LEU CD1 HD11 sing N N 306 LEU CD1 HD12 sing N N 307 LEU CD1 HD13 sing N N 308 LEU CD2 HD21 sing N N 309 LEU CD2 HD22 sing N N 310 LEU CD2 HD23 sing N N 311 LEU OXT HXT sing N N 312 LYS N CA sing N N 313 LYS N H sing N N 314 LYS N H2 sing N N 315 LYS CA C sing N N 316 LYS CA CB sing N N 317 LYS CA HA sing N N 318 LYS C O doub N N 319 LYS C OXT sing N N 320 LYS CB CG sing N N 321 LYS CB HB2 sing N N 322 LYS CB HB3 sing N N 323 LYS CG CD sing N N 324 LYS CG HG2 sing N N 325 LYS CG HG3 sing N N 326 LYS CD CE sing N N 327 LYS CD HD2 sing N N 328 LYS CD HD3 sing N N 329 LYS CE NZ sing N N 330 LYS CE HE2 sing N N 331 LYS CE HE3 sing N N 332 LYS NZ HZ1 sing N N 333 LYS NZ HZ2 sing N N 334 LYS NZ HZ3 sing N N 335 LYS OXT HXT sing N N 336 MET N CA sing N N 337 MET N H sing N N 338 MET N H2 sing N N 339 MET CA C sing N N 340 MET CA CB sing N N 341 MET CA HA sing N N 342 MET C O doub N N 343 MET C OXT sing N N 344 MET CB CG sing N N 345 MET CB HB2 sing N N 346 MET CB HB3 sing N N 347 MET CG SD sing N N 348 MET CG HG2 sing N N 349 MET CG HG3 sing N N 350 MET SD CE sing N N 351 MET CE HE1 sing N N 352 MET CE HE2 sing N N 353 MET CE HE3 sing N N 354 MET OXT HXT sing N N 355 PHE N CA sing N N 356 PHE N H sing N N 357 PHE N H2 sing N N 358 PHE CA C sing N N 359 PHE CA CB sing N N 360 PHE CA HA sing N N 361 PHE C O doub N N 362 PHE C OXT sing N N 363 PHE CB CG sing N N 364 PHE CB HB2 sing N N 365 PHE CB HB3 sing N N 366 PHE CG CD1 doub Y N 367 PHE CG CD2 sing Y N 368 PHE CD1 CE1 sing Y N 369 PHE CD1 HD1 sing N N 370 PHE CD2 CE2 doub Y N 371 PHE CD2 HD2 sing N N 372 PHE CE1 CZ doub Y N 373 PHE CE1 HE1 sing N N 374 PHE CE2 CZ sing Y N 375 PHE CE2 HE2 sing N N 376 PHE CZ HZ sing N N 377 PHE OXT HXT sing N N 378 PRO N CA sing N N 379 PRO N CD sing N N 380 PRO N H sing N N 381 PRO CA C sing N N 382 PRO CA CB sing N N 383 PRO CA HA sing N N 384 PRO C O doub N N 385 PRO C OXT sing N N 386 PRO CB CG sing N N 387 PRO CB HB2 sing N N 388 PRO CB HB3 sing N N 389 PRO CG CD sing N N 390 PRO CG HG2 sing N N 391 PRO CG HG3 sing N N 392 PRO CD HD2 sing N N 393 PRO CD HD3 sing N N 394 PRO OXT HXT sing N N 395 SER N CA sing N N 396 SER N H sing N N 397 SER N H2 sing N N 398 SER CA C sing N N 399 SER CA CB sing N N 400 SER CA HA sing N N 401 SER C O doub N N 402 SER C OXT sing N N 403 SER CB OG sing N N 404 SER CB HB2 sing N N 405 SER CB HB3 sing N N 406 SER OG HG sing N N 407 SER OXT HXT sing N N 408 THR N CA sing N N 409 THR N H sing N N 410 THR N H2 sing N N 411 THR CA C sing N N 412 THR CA CB sing N N 413 THR CA HA sing N N 414 THR C O doub N N 415 THR C OXT sing N N 416 THR CB OG1 sing N N 417 THR CB CG2 sing N N 418 THR CB HB sing N N 419 THR OG1 HG1 sing N N 420 THR CG2 HG21 sing N N 421 THR CG2 HG22 sing N N 422 THR CG2 HG23 sing N N 423 THR OXT HXT sing N N 424 TYR N CA sing N N 425 TYR N H sing N N 426 TYR N H2 sing N N 427 TYR CA C sing N N 428 TYR CA CB sing N N 429 TYR CA HA sing N N 430 TYR C O doub N N 431 TYR C OXT sing N N 432 TYR CB CG sing N N 433 TYR CB HB2 sing N N 434 TYR CB HB3 sing N N 435 TYR CG CD1 doub Y N 436 TYR CG CD2 sing Y N 437 TYR CD1 CE1 sing Y N 438 TYR CD1 HD1 sing N N 439 TYR CD2 CE2 doub Y N 440 TYR CD2 HD2 sing N N 441 TYR CE1 CZ doub Y N 442 TYR CE1 HE1 sing N N 443 TYR CE2 CZ sing Y N 444 TYR CE2 HE2 sing N N 445 TYR CZ OH sing N N 446 TYR OH HH sing N N 447 TYR OXT HXT sing N N 448 VAL N CA sing N N 449 VAL N H sing N N 450 VAL N H2 sing N N 451 VAL CA C sing N N 452 VAL CA CB sing N N 453 VAL CA HA sing N N 454 VAL C O doub N N 455 VAL C OXT sing N N 456 VAL CB CG1 sing N N 457 VAL CB CG2 sing N N 458 VAL CB HB sing N N 459 VAL CG1 HG11 sing N N 460 VAL CG1 HG12 sing N N 461 VAL CG1 HG13 sing N N 462 VAL CG2 HG21 sing N N 463 VAL CG2 HG22 sing N N 464 VAL CG2 HG23 sing N N 465 VAL OXT HXT sing N N 466 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 7Z5I 'double helix' 7Z5I 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DG 1 1_555 D DC 18 1_555 -1.058 -0.838 0.084 5.879 -9.661 -17.745 1 E_DG1:DC18_F E 1 ? F 18 ? 19 1 1 C DC 2 1_555 D DG 17 1_555 0.327 -0.365 0.070 3.928 -10.630 -3.773 2 E_DC2:DG17_F E 2 ? F 17 ? 19 1 1 C DG 3 1_555 D DC 16 1_555 -0.767 -0.201 0.391 5.989 -6.053 0.249 3 E_DG3:DC16_F E 3 ? F 16 ? 19 1 1 C DC 4 1_555 D DG 15 1_555 -0.570 0.303 0.381 -8.294 -2.940 1.594 4 E_DC4:DG15_F E 4 ? F 15 ? 19 1 1 C DG 5 1_555 D DC 14 1_555 -0.234 0.017 0.432 2.090 -0.649 2.634 5 E_DG5:DC14_F E 5 ? F 14 ? 19 1 1 C DT 6 1_555 D DA 13 1_555 -0.619 -0.046 0.502 -4.352 -6.699 1.225 6 E_DT6:DA13_F E 6 ? F 13 ? 20 1 1 C DC 7 1_555 D DG 12 1_555 -0.101 0.038 0.212 -1.562 -8.860 4.238 7 E_DC7:DG12_F E 7 ? F 12 ? 19 1 1 C DA 8 1_555 D DT 11 1_555 -0.224 -0.321 0.950 18.062 -13.213 -0.162 8 E_DA8:DT11_F E 8 ? F 11 ? 20 1 1 C DG 9 1_555 D DC 10 1_555 -0.483 -0.141 0.664 1.343 -2.144 -1.211 9 E_DG9:DC10_F E 9 ? F 10 ? 19 1 1 C DC 10 1_555 D DG 9 1_555 0.205 -0.082 0.620 -0.009 -2.790 -0.948 10 E_DC10:DG9_F E 10 ? F 9 ? 19 1 1 C DT 11 1_555 D DA 8 1_555 0.067 -0.154 0.841 -17.306 -14.692 -0.457 11 E_DT11:DA8_F E 11 ? F 8 ? 20 1 1 C DG 12 1_555 D DC 7 1_555 0.228 0.230 0.110 2.350 -8.602 3.121 12 E_DG12:DC7_F E 12 ? F 7 ? 19 1 1 C DA 13 1_555 D DT 6 1_555 0.830 -0.039 0.418 6.252 -6.804 -0.036 13 E_DA13:DT6_F E 13 ? F 6 ? 20 1 1 C DC 14 1_555 D DG 5 1_555 0.381 -0.198 0.214 0.253 -4.802 2.505 14 E_DC14:DG5_F E 14 ? F 5 ? 19 1 1 C DG 15 1_555 D DC 4 1_555 0.085 0.004 -0.170 9.040 -7.981 2.609 15 E_DG15:DC4_F E 15 ? F 4 ? 19 1 1 C DC 16 1_555 D DG 3 1_555 -0.118 -0.054 -0.251 -8.323 -11.002 1.153 16 E_DC16:DG3_F E 16 ? F 3 ? 19 1 1 C DG 17 1_555 D DC 2 1_555 -0.036 -0.108 -0.350 -13.877 7.707 -1.043 17 E_DG17:DC2_F E 17 ? F 2 ? 19 1 1 C DT 18 1_555 D DA 1 1_555 1.095 -0.146 0.230 7.956 3.919 -2.324 18 E_DT18:DA1_F E 18 ? F 1 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DG 1 1_555 D DC 18 1_555 C DC 2 1_555 D DG 17 1_555 0.359 0.118 3.367 2.156 -1.423 50.437 0.242 -0.263 3.374 -1.669 -2.528 50.499 1 EE_DG1DC2:DG17DC18_FF E 1 ? F 18 ? E 2 ? F 17 ? 1 C DC 2 1_555 D DG 17 1_555 C DG 3 1_555 D DC 16 1_555 0.470 0.985 3.230 -1.735 2.184 33.492 1.348 -1.095 3.258 3.781 3.004 33.605 2 EE_DC2DG3:DC16DG17_FF E 2 ? F 17 ? E 3 ? F 16 ? 1 C DG 3 1_555 D DC 16 1_555 C DC 4 1_555 D DG 15 1_555 0.391 -0.728 3.745 -0.439 0.002 34.827 -1.216 -0.729 3.740 0.004 0.734 34.830 3 EE_DG3DC4:DG15DC16_FF E 3 ? F 16 ? E 4 ? F 15 ? 1 C DC 4 1_555 D DG 15 1_555 C DG 5 1_555 D DC 14 1_555 0.623 0.729 3.195 1.381 4.786 38.976 0.518 -0.763 3.278 7.137 -2.059 39.281 4 EE_DC4DG5:DC14DG15_FF E 4 ? F 15 ? E 5 ? F 14 ? 1 C DG 5 1_555 D DC 14 1_555 C DT 6 1_555 D DA 13 1_555 0.100 -1.186 3.501 -0.729 3.620 25.435 -3.731 -0.440 3.299 8.167 1.644 25.697 5 EE_DG5DT6:DA13DC14_FF E 5 ? F 14 ? E 6 ? F 13 ? 1 C DT 6 1_555 D DA 13 1_555 C DC 7 1_555 D DG 12 1_555 0.605 -0.746 3.037 5.916 3.776 33.890 -1.798 -0.166 2.999 6.392 -10.016 34.588 6 EE_DT6DC7:DG12DA13_FF E 6 ? F 13 ? E 7 ? F 12 ? 1 C DC 7 1_555 D DG 12 1_555 C DA 8 1_555 D DT 11 1_555 -0.001 0.524 2.890 -4.505 6.168 35.563 0.068 -0.562 2.916 9.956 7.272 36.348 7 EE_DC7DA8:DT11DG12_FF E 7 ? F 12 ? E 8 ? F 11 ? 1 C DA 8 1_555 D DT 11 1_555 C DG 9 1_555 D DC 10 1_555 0.181 -0.659 3.710 0.668 -0.294 33.135 -1.099 -0.190 3.719 -0.515 -1.172 33.143 8 EE_DA8DG9:DC10DT11_FF E 8 ? F 11 ? E 9 ? F 10 ? 1 C DG 9 1_555 D DC 10 1_555 C DC 10 1_555 D DG 9 1_555 0.010 -0.729 3.284 0.244 4.889 36.181 -1.832 0.018 3.162 7.828 -0.391 36.499 9 EE_DG9DC10:DG9DC10_FF E 9 ? F 10 ? E 10 ? F 9 ? 1 C DC 10 1_555 D DG 9 1_555 C DT 11 1_555 D DA 8 1_555 -0.184 -0.652 3.702 -0.206 -0.648 34.090 -0.995 0.276 3.714 -1.104 0.352 34.096 10 EE_DC10DT11:DA8DG9_FF E 10 ? F 9 ? E 11 ? F 8 ? 1 C DT 11 1_555 D DA 8 1_555 C DG 12 1_555 D DC 7 1_555 -0.023 0.590 2.886 4.076 5.323 36.842 0.293 0.514 2.921 8.337 -6.385 37.426 11 EE_DT11DG12:DC7DA8_FF E 11 ? F 8 ? E 12 ? F 7 ? 1 C DG 12 1_555 D DC 7 1_555 C DA 13 1_555 D DT 6 1_555 -0.585 -0.729 3.010 -5.964 3.361 34.118 -1.695 0.136 2.984 5.658 10.040 34.778 12 EE_DG12DA13:DT6DC7_FF E 12 ? F 7 ? E 13 ? F 6 ? 1 C DA 13 1_555 D DT 6 1_555 C DC 14 1_555 D DG 5 1_555 0.028 -1.188 3.467 1.514 1.987 25.226 -3.308 0.395 3.360 4.536 -3.457 25.347 13 EE_DA13DC14:DG5DT6_FF E 13 ? F 6 ? E 14 ? F 5 ? 1 C DC 14 1_555 D DG 5 1_555 C DG 15 1_555 D DC 4 1_555 -0.469 0.597 3.104 0.626 7.204 37.399 0.032 0.797 3.153 11.108 -0.966 38.067 14 EE_DC14DG15:DC4DG5_FF E 14 ? F 5 ? E 15 ? F 4 ? 1 C DG 15 1_555 D DC 4 1_555 C DC 16 1_555 D DG 3 1_555 -0.373 -0.758 3.744 1.055 0.155 34.543 -1.304 0.814 3.728 0.260 -1.776 34.559 15 EE_DG15DC16:DG3DC4_FF E 15 ? F 4 ? E 16 ? F 3 ? 1 C DC 16 1_555 D DG 3 1_555 C DG 17 1_555 D DC 2 1_555 0.047 0.618 3.485 -2.448 12.660 33.929 -0.964 -0.455 3.477 20.786 4.019 36.229 16 EE_DC16DG17:DC2DG3_FF E 16 ? F 3 ? E 17 ? F 2 ? 1 C DG 17 1_555 D DC 2 1_555 C DT 18 1_555 D DA 1 1_555 -0.011 -0.328 2.930 -5.973 0.198 34.199 -0.577 -0.801 2.889 0.333 10.062 34.702 17 EE_DG17DT18:DA1DC2_FF E 17 ? F 2 ? E 18 ? F 1 ? # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1MDY _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 7Z5I _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.005999 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000109 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.029479 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018615 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_