data_7Z9P # _entry.id 7Z9P # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7Z9P pdb_00007z9p 10.2210/pdb7z9p/pdb WWPDB D_1292121522 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-03-29 2 'Structure model' 1 1 2023-05-03 3 'Structure model' 1 2 2023-05-31 4 'Structure model' 1 3 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 3 'Structure model' '_citation.journal_volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7Z9P _pdbx_database_status.recvd_initial_deposition_date 2022-03-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email clive.mason@summitplc.com _pdbx_contact_author.name_first Clive _pdbx_contact_author.name_last Mason _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-3179-6622 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Mason, S.' 1 0000-0003-3179-6622 'Leonard, P.M.' 2 0000-0002-2988-5557 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Antimicrob.Agents Chemother.' _citation.journal_id_ASTM AMACCQ _citation.journal_id_CSD 0788 _citation.journal_id_ISSN 1098-6596 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 67 _citation.language ? _citation.page_first e0156322 _citation.page_last e0156322 _citation.title 'The Novel DNA Binding Mechanism of Ridinilazole, a Precision Clostridiodes difficile Antibiotic.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1128/aac.01563-22 _citation.pdbx_database_id_PubMed 37093023 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mason, C.S.' 1 0000-0003-3179-6622 primary 'Avis, T.' 2 ? primary 'Hu, C.' 3 ? primary 'Nagalingam, N.' 4 ? primary 'Mudaliar, M.' 5 ? primary 'Coward, C.' 6 ? primary 'Begum, K.' 7 ? primary 'Gajewski, K.' 8 ? primary 'Alam, M.J.' 9 ? primary 'Basseres, E.' 10 ? primary 'Moss, S.' 11 ? primary 'Reich, S.' 12 ? primary 'Duperchy, E.' 13 ? primary 'Fox, K.R.' 14 ? primary 'Garey, K.W.' 15 ? primary 'Powell, D.J.' 16 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(P*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G*(RID))-3') ; 3663.392 6 ? ? ? ? 2 non-polymer syn Ridinilazole 388.424 3 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 5 ? ? ? ? 4 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 5 non-polymer syn 'ZINC ION' 65.409 3 ? ? ? ? 6 water nat water 18.015 48 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DC)(DG)(DA)(DA)(DT)(DT)(DC)(DG)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CGCGAATTCGCG _entity_poly.pdbx_strand_id A,B,C,D,E,F _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 Ridinilazole IK7 3 'SULFATE ION' SO4 4 'SODIUM ION' NA 5 'ZINC ION' ZN 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DC n 1 4 DG n 1 5 DA n 1 6 DA n 1 7 DT n 1 8 DT n 1 9 DC n 1 10 DG n 1 11 DC n 1 12 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 12 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name 32630 _pdbx_entity_src_syn.ncbi_taxonomy_id 1496 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 IK7 non-polymer . Ridinilazole '2-pyridin-4-yl-5-(2-pyridin-4-yl-1H-benzimidazol-5-yl)-1H-benzimidazole' 'C24 H16 N6' 388.424 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 ? ? ? A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DC 3 3 3 DC DC A . n A 1 4 DG 4 4 4 DG DG A . n A 1 5 DA 5 5 5 DA DA A . n A 1 6 DA 6 6 6 DA DA A . n A 1 7 DT 7 7 7 DT DT A . n A 1 8 DT 8 8 8 DT DT A . n A 1 9 DC 9 9 9 DC DC A . n A 1 10 DG 10 10 10 DG DG A . n A 1 11 DC 11 11 11 DC DC A . n A 1 12 DG 12 12 12 DG DG A . n B 1 1 DC 1 13 ? ? ? B . n B 1 2 DG 2 14 14 DG DG B . n B 1 3 DC 3 15 15 DC DC B . n B 1 4 DG 4 16 16 DG DG B . n B 1 5 DA 5 17 17 DA DA B . n B 1 6 DA 6 18 18 DA DA B . n B 1 7 DT 7 19 19 DT DT B . n B 1 8 DT 8 20 20 DT DT B . n B 1 9 DC 9 21 21 DC DC B . n B 1 10 DG 10 22 22 DG DG B . n B 1 11 DC 11 23 23 DC DC B . n B 1 12 DG 12 24 24 DG DG B . n C 1 1 DC 1 1 ? ? ? C . n C 1 2 DG 2 2 2 DG DG C . n C 1 3 DC 3 3 3 DC DC C . n C 1 4 DG 4 4 4 DG DG C . n C 1 5 DA 5 5 5 DA DA C . n C 1 6 DA 6 6 6 DA DA C . n C 1 7 DT 7 7 7 DT DT C . n C 1 8 DT 8 8 8 DT DT C . n C 1 9 DC 9 9 9 DC DC C . n C 1 10 DG 10 10 10 DG DG C . n C 1 11 DC 11 11 11 DC DC C . n C 1 12 DG 12 12 12 DG DG C . n D 1 1 DC 1 13 ? ? ? D . n D 1 2 DG 2 14 14 DG DG D . n D 1 3 DC 3 15 15 DC DC D . n D 1 4 DG 4 16 16 DG DG D . n D 1 5 DA 5 17 17 DA DA D . n D 1 6 DA 6 18 18 DA DA D . n D 1 7 DT 7 19 19 DT DT D . n D 1 8 DT 8 20 20 DT DT D . n D 1 9 DC 9 21 21 DC DC D . n D 1 10 DG 10 22 22 DG DG D . n D 1 11 DC 11 23 23 DC DC D . n D 1 12 DG 12 24 24 DG DG D . n E 1 1 DC 1 1 ? ? ? E . n E 1 2 DG 2 2 2 DG DG E . n E 1 3 DC 3 3 3 DC DC E . n E 1 4 DG 4 4 4 DG DG E . n E 1 5 DA 5 5 5 DA DA E . n E 1 6 DA 6 6 6 DA DA E . n E 1 7 DT 7 7 7 DT DT E . n E 1 8 DT 8 8 8 DT DT E . n E 1 9 DC 9 9 9 DC DC E . n E 1 10 DG 10 10 10 DG DG E . n E 1 11 DC 11 11 11 DC DC E . n E 1 12 DG 12 12 12 DG DG E . n F 1 1 DC 1 13 ? ? ? F . n F 1 2 DG 2 14 14 DG DG F . n F 1 3 DC 3 15 15 DC DC F . n F 1 4 DG 4 16 16 DG DG F . n F 1 5 DA 5 17 17 DA DA F . n F 1 6 DA 6 18 18 DA DA F . n F 1 7 DT 7 19 19 DT DT F . n F 1 8 DT 8 20 20 DT DT F . n F 1 9 DC 9 21 21 DC DC F . n F 1 10 DG 10 22 22 DG DG F . n F 1 11 DC 11 23 23 DC DC F . n F 1 12 DG 12 24 24 DG DG F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 IK7 1 101 101 IK7 RID A . H 3 SO4 1 102 1 SO4 SO4 A . I 4 NA 1 103 4 NA NA A . J 3 SO4 1 101 3 SO4 SO4 C . K 3 SO4 1 102 4 SO4 SO4 C . L 3 SO4 1 103 5 SO4 SO4 C . M 5 ZN 1 104 1 ZN ZN C . N 5 ZN 1 105 2 ZN ZN C . O 2 IK7 1 101 101 IK7 RID D . P 2 IK7 1 101 101 IK7 RID E . Q 3 SO4 1 102 6 SO4 SO4 E . R 5 ZN 1 101 3 ZN ZN F . S 6 HOH 1 201 22 HOH HOH A . S 6 HOH 2 202 40 HOH HOH A . S 6 HOH 3 203 21 HOH HOH A . S 6 HOH 4 204 12 HOH HOH A . S 6 HOH 5 205 4 HOH HOH A . S 6 HOH 6 206 36 HOH HOH A . S 6 HOH 7 207 37 HOH HOH A . S 6 HOH 8 208 5 HOH HOH A . T 6 HOH 1 101 33 HOH HOH B . T 6 HOH 2 102 31 HOH HOH B . T 6 HOH 3 103 6 HOH HOH B . T 6 HOH 4 104 28 HOH HOH B . T 6 HOH 5 105 27 HOH HOH B . T 6 HOH 6 106 23 HOH HOH B . T 6 HOH 7 107 3 HOH HOH B . U 6 HOH 1 201 14 HOH HOH C . U 6 HOH 2 202 7 HOH HOH C . U 6 HOH 3 203 45 HOH HOH C . U 6 HOH 4 204 10 HOH HOH C . U 6 HOH 5 205 20 HOH HOH C . U 6 HOH 6 206 44 HOH HOH C . U 6 HOH 7 207 41 HOH HOH C . U 6 HOH 8 208 15 HOH HOH C . U 6 HOH 9 209 1 HOH HOH C . U 6 HOH 10 210 47 HOH HOH C . U 6 HOH 11 211 17 HOH HOH C . U 6 HOH 12 212 11 HOH HOH C . U 6 HOH 13 213 18 HOH HOH C . V 6 HOH 1 201 32 HOH HOH D . V 6 HOH 2 202 30 HOH HOH D . V 6 HOH 3 203 16 HOH HOH D . V 6 HOH 4 204 29 HOH HOH D . V 6 HOH 5 205 2 HOH HOH D . V 6 HOH 6 206 9 HOH HOH D . V 6 HOH 7 207 24 HOH HOH D . V 6 HOH 8 208 13 HOH HOH D . W 6 HOH 1 201 39 HOH HOH E . W 6 HOH 2 202 8 HOH HOH E . W 6 HOH 3 203 38 HOH HOH E . W 6 HOH 4 204 34 HOH HOH E . W 6 HOH 5 205 19 HOH HOH E . W 6 HOH 6 206 35 HOH HOH E . W 6 HOH 7 207 42 HOH HOH E . W 6 HOH 8 208 43 HOH HOH E . X 6 HOH 1 201 25 HOH HOH F . X 6 HOH 2 202 26 HOH HOH F . X 6 HOH 3 203 48 HOH HOH F . X 6 HOH 4 204 46 HOH HOH F . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0267 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DIALS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 60.78 _cell.angle_alpha_esd ? _cell.angle_beta 87.31 _cell.angle_beta_esd ? _cell.angle_gamma 61.62 _cell.angle_gamma_esd ? _cell.entry_id 7Z9P _cell.details ? _cell.formula_units_Z ? _cell.length_a 38.576 _cell.length_a_esd ? _cell.length_b 40.320 _cell.length_b_esd ? _cell.length_c 40.577 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Z9P _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7Z9P _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 42.52 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 287 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.01 M Zinc sulphate heptahydrate 0.1 M MES 6.5 25 % v/v PEG 500 MME' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER2 XE 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-11-26 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9795 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I04 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7Z9P _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.20 _reflns.d_resolution_low 30.08 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 8926 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 96.4 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 1.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 5.3 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.990 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.2 _reflns_shell.d_res_low 2.27 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.1 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 725 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.548 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] -0.00 _refine.aniso_B[1][2] -0.01 _refine.aniso_B[1][3] 0.09 _refine.aniso_B[2][2] -0.08 _refine.aniso_B[2][3] -0.09 _refine.aniso_B[3][3] -0.05 _refine.B_iso_max ? _refine.B_iso_mean 38.280 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.944 _refine.correlation_coeff_Fo_to_Fc_free 0.923 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7Z9P _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.20 _refine.ls_d_res_low 30.10 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 8514 _refine.ls_number_reflns_R_free 410 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 96.40 _refine.ls_percent_reflns_R_free 4.6 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.22485 _refine.ls_R_factor_R_free 0.24137 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.22373 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 3U2N _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.404 _refine.pdbx_overall_ESU_R_Free 0.231 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 8.006 _refine.overall_SU_ML 0.207 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.details ? _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 30.10 _refine_hist.number_atoms_solvent 48 _refine_hist.number_atoms_total 1529 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1362 _refine_hist.pdbx_number_atoms_ligand 119 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 0.012 1649 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.017 786 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 2.266 1.722 2520 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.401 1.551 1848 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.168 0.200 258 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.014 0.020 918 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 288 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 3.396 3.972 1649 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 3.220 3.956 1629 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 3.926 5.916 2491 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 5.440 36.780 2424 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 5.231 36.597 2405 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.200 _refine_ls_shell.d_res_low 2.257 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 9 _refine_ls_shell.number_reflns_R_work 608 _refine_ls_shell.percent_reflns_obs 86.78 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.325 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.252 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 7Z9P _struct.title 'The novel DNA binding mechanism of ridinilazole, a precision Clostridiodes difficile antibiotic' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7Z9P _struct_keywords.text 'Clostridiodes difficile, antibiotic, DNA-binding, drug discovery, target identification, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 2 ? H N N 3 ? I N N 4 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 5 ? N N N 5 ? O N N 2 ? P N N 2 ? Q N N 3 ? R N N 5 ? S N N 6 ? T N N 6 ? U N N 6 ? V N N 6 ? W N N 6 ? X N N 6 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 7Z9P _struct_ref.pdbx_db_accession 7Z9P _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7Z9P A 1 ? 12 ? 7Z9P 1 ? 12 ? 1 12 2 1 7Z9P B 1 ? 12 ? 7Z9P 13 ? 24 ? 13 24 3 1 7Z9P C 1 ? 12 ? 7Z9P 1 ? 12 ? 1 12 4 1 7Z9P D 1 ? 12 ? 7Z9P 13 ? 24 ? 13 24 5 1 7Z9P E 1 ? 12 ? 7Z9P 1 ? 12 ? 1 12 6 1 7Z9P F 1 ? 12 ? 7Z9P 13 ? 24 ? 13 24 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 3 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1530 ? 1 MORE -36 ? 1 'SSA (A^2)' 4200 ? 2 'ABSA (A^2)' 1630 ? 2 MORE -47 ? 2 'SSA (A^2)' 4280 ? 3 'ABSA (A^2)' 1620 ? 3 MORE -46 ? 3 'SSA (A^2)' 4320 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,G,H,I,S,T 2 1 C,D,J,K,L,M,N,O,U,V 3 1 E,F,P,Q,R,W,X # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DA 5 OP1 ? ? ? 1_555 I NA . NA ? ? A DA 5 A NA 103 1_555 ? ? ? ? ? ? ? 2.009 ? ? metalc2 metalc ? ? A DC 11 OP1 ? ? ? 1_555 M ZN . ZN ? ? A DC 11 C ZN 104 1_455 ? ? ? ? ? ? ? 2.404 ? ? metalc3 metalc ? ? A DG 12 O6 ? ? ? 1_555 M ZN . ZN ? ? A DG 12 C ZN 104 1_455 ? ? ? ? ? ? ? 2.629 ? ? metalc4 metalc ? ? A DG 12 OP1 ? ? ? 1_555 R ZN . ZN ? ? A DG 12 F ZN 101 1_465 ? ? ? ? ? ? ? 2.098 ? ? metalc5 metalc ? ? I NA . NA ? ? ? 1_555 S HOH . O ? ? A NA 103 A HOH 204 1_555 ? ? ? ? ? ? ? 2.286 ? ? metalc6 metalc ? ? I NA . NA ? ? ? 1_564 C DA 5 OP1 ? ? A NA 103 C DA 5 1_555 ? ? ? ? ? ? ? 2.179 ? ? metalc7 metalc ? ? I NA . NA ? ? ? 1_555 U HOH . O ? ? A NA 103 C HOH 207 1_546 ? ? ? ? ? ? ? 2.095 ? ? metalc8 metalc ? ? I NA . NA ? ? ? 1_555 E DA 5 OP1 ? ? A NA 103 E DA 5 1_555 ? ? ? ? ? ? ? 2.203 ? ? metalc9 metalc ? ? I NA . NA ? ? ? 1_555 W HOH . O ? ? A NA 103 E HOH 207 1_555 ? ? ? ? ? ? ? 2.310 ? ? metalc10 metalc ? ? S HOH . O ? ? ? 1_655 M ZN . ZN ? ? A HOH 205 C ZN 104 1_555 ? ? ? ? ? ? ? 2.452 ? ? metalc11 metalc ? ? B DG 12 OP1 ? ? ? 1_555 M ZN . ZN ? ? B DG 24 C ZN 104 1_545 ? ? ? ? ? ? ? 2.208 ? ? metalc12 metalc ? ? C DC 11 OP1 ? ? ? 1_555 N ZN . ZN ? ? C DC 11 C ZN 105 1_555 ? ? ? ? ? ? ? 2.278 ? ? metalc13 metalc ? ? C DG 12 OP1 ? ? ? 1_555 M ZN . ZN ? ? C DG 12 C ZN 104 1_555 ? ? ? ? ? ? ? 2.333 ? ? metalc14 metalc ? ? C DG 12 O6 ? ? ? 1_555 N ZN . ZN ? ? C DG 12 C ZN 105 1_555 ? ? ? ? ? ? ? 2.416 ? ? metalc15 metalc ? ? M ZN . ZN ? ? ? 1_555 U HOH . O ? ? C ZN 104 C HOH 205 1_555 ? ? ? ? ? ? ? 2.513 ? ? metalc16 metalc ? ? N ZN . ZN ? ? ? 1_555 U HOH . O ? ? C ZN 105 C HOH 204 1_555 ? ? ? ? ? ? ? 2.427 ? ? metalc17 metalc ? ? N ZN . ZN ? ? ? 1_555 U HOH . O ? ? C ZN 105 C HOH 209 1_555 ? ? ? ? ? ? ? 2.555 ? ? metalc18 metalc ? ? N ZN . ZN ? ? ? 1_554 D DG 12 OP1 ? ? C ZN 105 D DG 24 1_555 ? ? ? ? ? ? ? 2.271 ? ? metalc19 metalc ? ? N ZN . ZN ? ? ? 1_555 E DG 12 OP1 ? ? C ZN 105 E DG 12 1_555 ? ? ? ? ? ? ? 2.369 ? ? metalc20 metalc ? ? U HOH . O ? ? ? 1_545 R ZN . ZN ? ? C HOH 202 F ZN 101 1_555 ? ? ? ? ? ? ? 2.497 ? ? metalc21 metalc ? ? E DC 11 OP1 ? ? ? 1_555 R ZN . ZN ? ? E DC 11 F ZN 101 1_565 ? ? ? ? ? ? ? 2.389 ? ? metalc22 metalc ? ? E DG 12 O6 ? ? ? 1_555 R ZN . ZN ? ? E DG 12 F ZN 101 1_565 ? ? ? ? ? ? ? 2.611 ? ? metalc23 metalc ? ? W HOH . O ? ? ? 1_545 R ZN . ZN ? ? E HOH 202 F ZN 101 1_555 ? ? ? ? ? ? ? 2.516 ? ? metalc24 metalc ? ? F DG 12 OP1 ? ? ? 1_555 R ZN . ZN ? ? F DG 24 F ZN 101 1_555 ? ? ? ? ? ? ? 2.329 ? ? hydrog1 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 11 N3 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 11 O2 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 11 N4 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 9 N3 ? ? A DG 4 B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 9 O2 ? ? A DG 4 B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 9 N4 ? ? A DG 4 B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 8 N3 ? ? A DA 5 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 8 O4 ? ? A DA 5 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 7 N3 ? ? A DA 6 B DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 7 O4 ? ? A DA 6 B DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 6 N1 ? ? A DT 7 B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 6 N6 ? ? A DT 7 B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 5 N1 ? ? A DT 8 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 5 N6 ? ? A DT 8 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 9 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 9 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 9 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 10 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 10 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 10 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DG 2 N1 ? ? ? 1_555 D DC 11 N3 ? ? C DG 2 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DG 2 N2 ? ? ? 1_555 D DC 11 O2 ? ? C DG 2 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DG 2 O6 ? ? ? 1_555 D DC 11 N4 ? ? C DG 2 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DC 3 N3 ? ? ? 1_555 D DG 10 N1 ? ? C DC 3 D DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DC 3 N4 ? ? ? 1_555 D DG 10 O6 ? ? C DC 3 D DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DC 3 O2 ? ? ? 1_555 D DG 10 N2 ? ? C DC 3 D DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DG 4 N1 ? ? ? 1_555 D DC 9 N3 ? ? C DG 4 D DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DG 4 N2 ? ? ? 1_555 D DC 9 O2 ? ? C DG 4 D DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DG 4 O6 ? ? ? 1_555 D DC 9 N4 ? ? C DG 4 D DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 8 N3 ? ? C DA 5 D DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 8 O4 ? ? C DA 5 D DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DA 6 N1 ? ? ? 1_555 D DT 7 N3 ? ? C DA 6 D DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DA 6 N6 ? ? ? 1_555 D DT 7 O4 ? ? C DA 6 D DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DT 7 N3 ? ? ? 1_555 D DA 6 N1 ? ? C DT 7 D DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DT 7 O4 ? ? ? 1_555 D DA 6 N6 ? ? C DT 7 D DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DT 8 N3 ? ? ? 1_555 D DA 5 N1 ? ? C DT 8 D DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DT 8 O4 ? ? ? 1_555 D DA 5 N6 ? ? C DT 8 D DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C DC 9 N3 ? ? ? 1_555 D DG 4 N1 ? ? C DC 9 D DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C DC 9 N4 ? ? ? 1_555 D DG 4 O6 ? ? C DC 9 D DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C DC 9 O2 ? ? ? 1_555 D DG 4 N2 ? ? C DC 9 D DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C DG 10 N1 ? ? ? 1_555 D DC 3 N3 ? ? C DG 10 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? C DG 10 N2 ? ? ? 1_555 D DC 3 O2 ? ? C DG 10 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? C DG 10 O6 ? ? ? 1_555 D DC 3 N4 ? ? C DG 10 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? C DC 11 N3 ? ? ? 1_555 D DG 2 N1 ? ? C DC 11 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? C DC 11 N4 ? ? ? 1_555 D DG 2 O6 ? ? C DC 11 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? C DC 11 O2 ? ? ? 1_555 D DG 2 N2 ? ? C DC 11 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? E DG 2 N1 ? ? ? 1_555 F DC 11 N3 ? ? E DG 2 F DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? E DG 2 N2 ? ? ? 1_555 F DC 11 O2 ? ? E DG 2 F DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? E DG 2 O6 ? ? ? 1_555 F DC 11 N4 ? ? E DG 2 F DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? E DC 3 N3 ? ? ? 1_555 F DG 10 N1 ? ? E DC 3 F DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? E DC 3 N4 ? ? ? 1_555 F DG 10 O6 ? ? E DC 3 F DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? E DC 3 O2 ? ? ? 1_555 F DG 10 N2 ? ? E DC 3 F DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? E DG 4 N1 ? ? ? 1_555 F DC 9 N3 ? ? E DG 4 F DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? E DG 4 N2 ? ? ? 1_555 F DC 9 O2 ? ? E DG 4 F DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? E DG 4 O6 ? ? ? 1_555 F DC 9 N4 ? ? E DG 4 F DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? E DA 5 N1 ? ? ? 1_555 F DT 8 N3 ? ? E DA 5 F DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? E DA 5 N6 ? ? ? 1_555 F DT 8 O4 ? ? E DA 5 F DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? E DA 6 N1 ? ? ? 1_555 F DT 7 N3 ? ? E DA 6 F DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? E DA 6 N6 ? ? ? 1_555 F DT 7 O4 ? ? E DA 6 F DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? E DT 7 N3 ? ? ? 1_555 F DA 6 N1 ? ? E DT 7 F DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? E DT 7 O4 ? ? ? 1_555 F DA 6 N6 ? ? E DT 7 F DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? E DT 8 N3 ? ? ? 1_555 F DA 5 N1 ? ? E DT 8 F DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? E DT 8 O4 ? ? ? 1_555 F DA 5 N6 ? ? E DT 8 F DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? E DC 9 N3 ? ? ? 1_555 F DG 4 N1 ? ? E DC 9 F DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? E DC 9 N4 ? ? ? 1_555 F DG 4 O6 ? ? E DC 9 F DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? E DC 9 O2 ? ? ? 1_555 F DG 4 N2 ? ? E DC 9 F DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? E DG 10 N1 ? ? ? 1_555 F DC 3 N3 ? ? E DG 10 F DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? E DG 10 N2 ? ? ? 1_555 F DC 3 O2 ? ? E DG 10 F DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? E DG 10 O6 ? ? ? 1_555 F DC 3 N4 ? ? E DG 10 F DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? E DC 11 N3 ? ? ? 1_555 F DG 2 N1 ? ? E DC 11 F DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? E DC 11 N4 ? ? ? 1_555 F DG 2 O6 ? ? E DC 11 F DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? E DC 11 O2 ? ? ? 1_555 F DG 2 N2 ? ? E DC 11 F DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? A DA 5 ? A DA 5 ? 1_555 NA ? I NA . ? A NA 103 ? 1_555 O ? S HOH . ? A HOH 204 ? 1_555 76.9 ? 2 OP1 ? A DA 5 ? A DA 5 ? 1_555 NA ? I NA . ? A NA 103 ? 1_555 OP1 ? C DA 5 ? C DA 5 ? 1_555 80.2 ? 3 O ? S HOH . ? A HOH 204 ? 1_555 NA ? I NA . ? A NA 103 ? 1_555 OP1 ? C DA 5 ? C DA 5 ? 1_555 109.8 ? 4 OP1 ? A DA 5 ? A DA 5 ? 1_555 NA ? I NA . ? A NA 103 ? 1_555 O ? U HOH . ? C HOH 207 ? 1_546 151.4 ? 5 O ? S HOH . ? A HOH 204 ? 1_555 NA ? I NA . ? A NA 103 ? 1_555 O ? U HOH . ? C HOH 207 ? 1_546 76.0 ? 6 OP1 ? C DA 5 ? C DA 5 ? 1_555 NA ? I NA . ? A NA 103 ? 1_555 O ? U HOH . ? C HOH 207 ? 1_546 118.0 ? 7 OP1 ? A DA 5 ? A DA 5 ? 1_555 NA ? I NA . ? A NA 103 ? 1_555 OP1 ? E DA 5 ? E DA 5 ? 1_555 105.1 ? 8 O ? S HOH . ? A HOH 204 ? 1_555 NA ? I NA . ? A NA 103 ? 1_555 OP1 ? E DA 5 ? E DA 5 ? 1_555 164.8 ? 9 OP1 ? C DA 5 ? C DA 5 ? 1_555 NA ? I NA . ? A NA 103 ? 1_555 OP1 ? E DA 5 ? E DA 5 ? 1_555 56.6 ? 10 O ? U HOH . ? C HOH 207 ? 1_546 NA ? I NA . ? A NA 103 ? 1_555 OP1 ? E DA 5 ? E DA 5 ? 1_555 103.4 ? 11 OP1 ? A DA 5 ? A DA 5 ? 1_555 NA ? I NA . ? A NA 103 ? 1_555 O ? W HOH . ? E HOH 207 ? 1_555 95.7 ? 12 O ? S HOH . ? A HOH 204 ? 1_555 NA ? I NA . ? A NA 103 ? 1_555 O ? W HOH . ? E HOH 207 ? 1_555 75.7 ? 13 OP1 ? C DA 5 ? C DA 5 ? 1_555 NA ? I NA . ? A NA 103 ? 1_555 O ? W HOH . ? E HOH 207 ? 1_555 42.1 ? 14 O ? U HOH . ? C HOH 207 ? 1_546 NA ? I NA . ? A NA 103 ? 1_555 O ? W HOH . ? E HOH 207 ? 1_555 86.6 ? 15 OP1 ? E DA 5 ? E DA 5 ? 1_555 NA ? I NA . ? A NA 103 ? 1_555 O ? W HOH . ? E HOH 207 ? 1_555 89.1 ? 16 OP1 ? A DC 11 ? A DC 11 ? 1_555 ZN ? M ZN . ? C ZN 104 ? 1_455 O6 ? A DG 12 ? A DG 12 ? 1_555 85.4 ? 17 OP1 ? A DC 11 ? A DC 11 ? 1_555 ZN ? M ZN . ? C ZN 104 ? 1_455 O ? S HOH . ? A HOH 205 ? 1_655 43.3 ? 18 O6 ? A DG 12 ? A DG 12 ? 1_555 ZN ? M ZN . ? C ZN 104 ? 1_455 O ? S HOH . ? A HOH 205 ? 1_655 42.1 ? 19 OP1 ? A DC 11 ? A DC 11 ? 1_555 ZN ? M ZN . ? C ZN 104 ? 1_455 OP1 ? B DG 12 ? B DG 24 ? 1_555 19.2 ? 20 O6 ? A DG 12 ? A DG 12 ? 1_555 ZN ? M ZN . ? C ZN 104 ? 1_455 OP1 ? B DG 12 ? B DG 24 ? 1_555 100.8 ? 21 O ? S HOH . ? A HOH 205 ? 1_655 ZN ? M ZN . ? C ZN 104 ? 1_455 OP1 ? B DG 12 ? B DG 24 ? 1_555 60.0 ? 22 OP1 ? A DC 11 ? A DC 11 ? 1_555 ZN ? M ZN . ? C ZN 104 ? 1_455 OP1 ? C DG 12 ? C DG 12 ? 1_555 46.2 ? 23 O6 ? A DG 12 ? A DG 12 ? 1_555 ZN ? M ZN . ? C ZN 104 ? 1_455 OP1 ? C DG 12 ? C DG 12 ? 1_555 39.8 ? 24 O ? S HOH . ? A HOH 205 ? 1_655 ZN ? M ZN . ? C ZN 104 ? 1_455 OP1 ? C DG 12 ? C DG 12 ? 1_555 4.8 ? 25 OP1 ? B DG 12 ? B DG 24 ? 1_555 ZN ? M ZN . ? C ZN 104 ? 1_455 OP1 ? C DG 12 ? C DG 12 ? 1_555 63.6 ? 26 OP1 ? A DC 11 ? A DC 11 ? 1_555 ZN ? M ZN . ? C ZN 104 ? 1_455 O ? U HOH . ? C HOH 205 ? 1_555 40.6 ? 27 O6 ? A DG 12 ? A DG 12 ? 1_555 ZN ? M ZN . ? C ZN 104 ? 1_455 O ? U HOH . ? C HOH 205 ? 1_555 45.2 ? 28 O ? S HOH . ? A HOH 205 ? 1_655 ZN ? M ZN . ? C ZN 104 ? 1_455 O ? U HOH . ? C HOH 205 ? 1_555 4.1 ? 29 OP1 ? B DG 12 ? B DG 24 ? 1_555 ZN ? M ZN . ? C ZN 104 ? 1_455 O ? U HOH . ? C HOH 205 ? 1_555 57.9 ? 30 OP1 ? C DG 12 ? C DG 12 ? 1_555 ZN ? M ZN . ? C ZN 104 ? 1_455 O ? U HOH . ? C HOH 205 ? 1_555 5.6 ? 31 OP1 ? A DG 12 ? A DG 12 ? 1_555 ZN ? R ZN . ? F ZN 101 ? 1_465 O ? U HOH . ? C HOH 202 ? 1_545 125.5 ? 32 OP1 ? A DG 12 ? A DG 12 ? 1_555 ZN ? R ZN . ? F ZN 101 ? 1_465 OP1 ? E DC 11 ? E DC 11 ? 1_555 71.1 ? 33 O ? U HOH . ? C HOH 202 ? 1_545 ZN ? R ZN . ? F ZN 101 ? 1_465 OP1 ? E DC 11 ? E DC 11 ? 1_555 58.5 ? 34 OP1 ? A DG 12 ? A DG 12 ? 1_555 ZN ? R ZN . ? F ZN 101 ? 1_465 O6 ? E DG 12 ? E DG 12 ? 1_555 67.4 ? 35 O ? U HOH . ? C HOH 202 ? 1_545 ZN ? R ZN . ? F ZN 101 ? 1_465 O6 ? E DG 12 ? E DG 12 ? 1_555 63.4 ? 36 OP1 ? E DC 11 ? E DC 11 ? 1_555 ZN ? R ZN . ? F ZN 101 ? 1_465 O6 ? E DG 12 ? E DG 12 ? 1_555 5.3 ? 37 OP1 ? A DG 12 ? A DG 12 ? 1_555 ZN ? R ZN . ? F ZN 101 ? 1_465 O ? W HOH . ? E HOH 202 ? 1_545 127.8 ? 38 O ? U HOH . ? C HOH 202 ? 1_545 ZN ? R ZN . ? F ZN 101 ? 1_465 O ? W HOH . ? E HOH 202 ? 1_545 2.6 ? 39 OP1 ? E DC 11 ? E DC 11 ? 1_555 ZN ? R ZN . ? F ZN 101 ? 1_465 O ? W HOH . ? E HOH 202 ? 1_545 60.2 ? 40 O6 ? E DG 12 ? E DG 12 ? 1_555 ZN ? R ZN . ? F ZN 101 ? 1_465 O ? W HOH . ? E HOH 202 ? 1_545 64.9 ? 41 OP1 ? A DG 12 ? A DG 12 ? 1_555 ZN ? R ZN . ? F ZN 101 ? 1_465 OP1 ? F DG 12 ? F DG 24 ? 1_555 125.6 ? 42 O ? U HOH . ? C HOH 202 ? 1_545 ZN ? R ZN . ? F ZN 101 ? 1_465 OP1 ? F DG 12 ? F DG 24 ? 1_555 5.0 ? 43 OP1 ? E DC 11 ? E DC 11 ? 1_555 ZN ? R ZN . ? F ZN 101 ? 1_465 OP1 ? F DG 12 ? F DG 24 ? 1_555 56.7 ? 44 O6 ? E DG 12 ? E DG 12 ? 1_555 ZN ? R ZN . ? F ZN 101 ? 1_465 OP1 ? F DG 12 ? F DG 24 ? 1_555 61.4 ? 45 O ? W HOH . ? E HOH 202 ? 1_545 ZN ? R ZN . ? F ZN 101 ? 1_465 OP1 ? F DG 12 ? F DG 24 ? 1_555 4.4 ? 46 OP1 ? C DC 11 ? C DC 11 ? 1_555 ZN ? N ZN . ? C ZN 105 ? 1_555 O6 ? C DG 12 ? C DG 12 ? 1_555 85.1 ? 47 OP1 ? C DC 11 ? C DC 11 ? 1_555 ZN ? N ZN . ? C ZN 105 ? 1_555 O ? U HOH . ? C HOH 204 ? 1_555 86.9 ? 48 O6 ? C DG 12 ? C DG 12 ? 1_555 ZN ? N ZN . ? C ZN 105 ? 1_555 O ? U HOH . ? C HOH 204 ? 1_555 85.5 ? 49 OP1 ? C DC 11 ? C DC 11 ? 1_555 ZN ? N ZN . ? C ZN 105 ? 1_555 O ? U HOH . ? C HOH 209 ? 1_555 89.4 ? 50 O6 ? C DG 12 ? C DG 12 ? 1_555 ZN ? N ZN . ? C ZN 105 ? 1_555 O ? U HOH . ? C HOH 209 ? 1_555 170.8 ? 51 O ? U HOH . ? C HOH 204 ? 1_555 ZN ? N ZN . ? C ZN 105 ? 1_555 O ? U HOH . ? C HOH 209 ? 1_555 86.9 ? 52 OP1 ? C DC 11 ? C DC 11 ? 1_555 ZN ? N ZN . ? C ZN 105 ? 1_555 OP1 ? D DG 12 ? D DG 24 ? 1_555 12.1 ? 53 O6 ? C DG 12 ? C DG 12 ? 1_555 ZN ? N ZN . ? C ZN 105 ? 1_555 OP1 ? D DG 12 ? D DG 24 ? 1_555 95.7 ? 54 O ? U HOH . ? C HOH 204 ? 1_555 ZN ? N ZN . ? C ZN 105 ? 1_555 OP1 ? D DG 12 ? D DG 24 ? 1_555 81.9 ? 55 O ? U HOH . ? C HOH 209 ? 1_555 ZN ? N ZN . ? C ZN 105 ? 1_555 OP1 ? D DG 12 ? D DG 24 ? 1_555 78.2 ? 56 OP1 ? C DC 11 ? C DC 11 ? 1_555 ZN ? N ZN . ? C ZN 105 ? 1_555 OP1 ? E DG 12 ? E DG 12 ? 1_555 173.5 ? 57 O6 ? C DG 12 ? C DG 12 ? 1_555 ZN ? N ZN . ? C ZN 105 ? 1_555 OP1 ? E DG 12 ? E DG 12 ? 1_555 88.6 ? 58 O ? U HOH . ? C HOH 204 ? 1_555 ZN ? N ZN . ? C ZN 105 ? 1_555 OP1 ? E DG 12 ? E DG 12 ? 1_555 93.9 ? 59 O ? U HOH . ? C HOH 209 ? 1_555 ZN ? N ZN . ? C ZN 105 ? 1_555 OP1 ? E DG 12 ? E DG 12 ? 1_555 97.0 ? 60 OP1 ? D DG 12 ? D DG 24 ? 1_555 ZN ? N ZN . ? C ZN 105 ? 1_555 OP1 ? E DG 12 ? E DG 12 ? 1_555 173.7 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OP1 _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 DT _pdbx_validate_close_contact.auth_seq_id_1 19 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 101 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.11 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P A DG 2 ? ? "O5'" A DG 2 ? ? 1.656 1.593 0.063 0.010 N 2 1 P A DG 12 ? ? "O5'" A DG 12 ? ? 1.657 1.593 0.064 0.010 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" A DC 3 ? ? "O3'" A DC 3 ? ? P A DG 4 ? ? 111.58 119.70 -8.12 1.20 Y 2 1 "C3'" B DC 15 ? ? "O3'" B DC 15 ? ? P B DG 16 ? ? 110.25 119.70 -9.45 1.20 Y 3 1 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? N9 B DG 16 ? ? 111.04 108.30 2.74 0.30 N 4 1 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 110.79 108.30 2.49 0.30 N 5 1 "O4'" D DG 22 ? ? "C1'" D DG 22 ? ? N9 D DG 22 ? ? 110.49 108.30 2.19 0.30 N 6 1 "O4'" E DG 2 ? ? "C1'" E DG 2 ? ? N9 E DG 2 ? ? 103.59 108.00 -4.41 0.70 N 7 1 "C3'" E DC 3 ? ? "O3'" E DC 3 ? ? P E DG 4 ? ? 112.48 119.70 -7.22 1.20 Y 8 1 "C3'" F DA 17 ? ? "O3'" F DA 17 ? ? P F DA 18 ? ? 111.06 119.70 -8.64 1.20 Y # _pdbx_entry_details.entry_id 7Z9P _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A DC 1 ? A DC 1 2 1 Y 1 B DC 13 ? B DC 1 3 1 Y 1 C DC 1 ? C DC 1 4 1 Y 1 D DC 13 ? D DC 1 5 1 Y 1 E DC 1 ? E DC 1 6 1 Y 1 F DC 13 ? F DC 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 IK7 N1 N Y N 147 IK7 N3 N Y N 148 IK7 C5 C Y N 149 IK7 C6 C Y N 150 IK7 C7 C Y N 151 IK7 C8 C Y N 152 IK7 C10 C Y N 153 IK7 C13 C Y N 154 IK7 C15 C Y N 155 IK7 C17 C Y N 156 IK7 C20 C Y N 157 IK7 C21 C Y N 158 IK7 C22 C Y N 159 IK7 C24 C Y N 160 IK7 C23 C Y N 161 IK7 C2 C Y N 162 IK7 C1 C Y N 163 IK7 C19 C Y N 164 IK7 C16 C Y N 165 IK7 C12 C Y N 166 IK7 C14 C Y N 167 IK7 C18 C Y N 168 IK7 C9 C Y N 169 IK7 C11 C Y N 170 IK7 C3 C Y N 171 IK7 C4 C Y N 172 IK7 N2 N Y N 173 IK7 N4 N Y N 174 IK7 N5 N Y N 175 IK7 N6 N Y N 176 IK7 H1 H N N 177 IK7 H2 H N N 178 IK7 H3 H N N 179 IK7 H4 H N N 180 IK7 H5 H N N 181 IK7 H6 H N N 182 IK7 H7 H N N 183 IK7 H8 H N N 184 IK7 H9 H N N 185 IK7 H10 H N N 186 IK7 H11 H N N 187 IK7 H12 H N N 188 IK7 H13 H N N 189 IK7 H14 H N N 190 IK7 H15 H N N 191 IK7 H16 H N N 192 NA NA NA N N 193 SO4 S S N N 194 SO4 O1 O N N 195 SO4 O2 O N N 196 SO4 O3 O N N 197 SO4 O4 O N N 198 ZN ZN ZN N N 199 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 IK7 C11 C10 doub Y N 152 IK7 C11 C12 sing Y N 153 IK7 C10 C9 sing Y N 154 IK7 C6 C7 doub Y N 155 IK7 C6 C5 sing Y N 156 IK7 C7 C8 sing Y N 157 IK7 C5 N1 sing Y N 158 IK7 C5 C22 doub Y N 159 IK7 C12 N2 sing Y N 160 IK7 C12 C19 doub Y N 161 IK7 C8 C9 sing N N 162 IK7 C8 C21 doub Y N 163 IK7 C9 C20 doub Y N 164 IK7 N1 C4 sing Y N 165 IK7 N2 C13 sing Y N 166 IK7 C22 C21 sing Y N 167 IK7 C22 N5 sing Y N 168 IK7 C4 N5 doub Y N 169 IK7 C4 C3 sing N N 170 IK7 C19 C20 sing Y N 171 IK7 C19 N4 sing Y N 172 IK7 C15 C16 doub Y N 173 IK7 C15 C14 sing Y N 174 IK7 C13 N4 doub Y N 175 IK7 C13 C14 sing N N 176 IK7 C2 C3 doub Y N 177 IK7 C2 C1 sing Y N 178 IK7 C3 C23 sing Y N 179 IK7 C1 N6 doub Y N 180 IK7 C23 C24 doub Y N 181 IK7 C16 N3 sing Y N 182 IK7 C14 C18 doub Y N 183 IK7 N6 C24 sing Y N 184 IK7 N3 C17 doub Y N 185 IK7 C18 C17 sing Y N 186 IK7 N1 H1 sing N N 187 IK7 C6 H2 sing N N 188 IK7 C7 H3 sing N N 189 IK7 C10 H4 sing N N 190 IK7 C15 H5 sing N N 191 IK7 C17 H6 sing N N 192 IK7 C20 H7 sing N N 193 IK7 C21 H8 sing N N 194 IK7 C24 H9 sing N N 195 IK7 C23 H10 sing N N 196 IK7 C2 H11 sing N N 197 IK7 C1 H12 sing N N 198 IK7 C16 H13 sing N N 199 IK7 C18 H14 sing N N 200 IK7 C11 H15 sing N N 201 IK7 N2 H16 sing N N 202 SO4 S O1 doub N N 203 SO4 S O2 doub N N 204 SO4 S O3 sing N N 205 SO4 S O4 sing N N 206 # _ndb_struct_conf_na.entry_id 7Z9P _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 2 1_555 B DC 11 1_555 0.057 -0.116 -0.230 -13.245 -4.545 -7.117 1 A_DG2:DC23_B A 2 ? B 23 ? 19 1 1 A DC 3 1_555 B DG 10 1_555 0.190 -0.165 0.566 -6.655 -1.428 -0.636 2 A_DC3:DG22_B A 3 ? B 22 ? 19 1 1 A DG 4 1_555 B DC 9 1_555 -0.324 0.021 -0.389 6.490 -16.436 3.134 3 A_DG4:DC21_B A 4 ? B 21 ? 19 1 1 A DA 5 1_555 B DT 8 1_555 -0.229 -0.153 -0.094 7.747 -16.347 5.786 4 A_DA5:DT20_B A 5 ? B 20 ? 20 1 1 A DA 6 1_555 B DT 7 1_555 0.277 -0.117 -0.156 -0.863 -15.362 0.534 5 A_DA6:DT19_B A 6 ? B 19 ? 20 1 1 A DT 7 1_555 B DA 6 1_555 -0.289 0.089 0.054 -2.882 -12.177 5.111 6 A_DT7:DA18_B A 7 ? B 18 ? 20 1 1 A DT 8 1_555 B DA 5 1_555 0.003 -0.135 -0.267 -1.272 -10.282 3.418 7 A_DT8:DA17_B A 8 ? B 17 ? 20 1 1 A DC 9 1_555 B DG 4 1_555 -0.248 -0.130 0.022 -13.446 -12.601 -3.267 8 A_DC9:DG16_B A 9 ? B 16 ? 19 1 1 A DG 10 1_555 B DC 3 1_555 -0.271 -0.114 0.287 2.386 0.835 -0.217 9 A_DG10:DC15_B A 10 ? B 15 ? 19 1 1 A DC 11 1_555 B DG 2 1_555 0.243 -0.157 0.063 7.695 7.804 0.831 10 A_DC11:DG14_B A 11 ? B 14 ? 19 1 1 C DG 2 1_555 D DC 11 1_555 -0.538 -0.057 0.575 -9.886 -3.738 -5.679 11 C_DG2:DC23_D C 2 ? D 23 ? 19 1 1 C DC 3 1_555 D DG 10 1_555 0.459 -0.197 0.642 -1.663 -0.938 2.823 12 C_DC3:DG22_D C 3 ? D 22 ? 19 1 1 C DG 4 1_555 D DC 9 1_555 0.144 0.208 0.377 16.778 -22.693 7.117 13 C_DG4:DC21_D C 4 ? D 21 ? 19 1 1 C DA 5 1_555 D DT 8 1_555 -0.350 -0.104 -0.405 1.118 -16.451 3.070 14 C_DA5:DT20_D C 5 ? D 20 ? 20 1 1 C DA 6 1_555 D DT 7 1_555 -0.012 -0.148 -0.115 -2.614 -22.132 6.817 15 C_DA6:DT19_D C 6 ? D 19 ? 20 1 1 C DT 7 1_555 D DA 6 1_555 0.334 0.264 0.131 -5.954 -15.169 8.259 16 C_DT7:DA18_D C 7 ? D 18 ? 20 1 1 C DT 8 1_555 D DA 5 1_555 0.092 0.036 -0.063 -11.351 -11.270 0.759 17 C_DT8:DA17_D C 8 ? D 17 ? 20 1 1 C DC 9 1_555 D DG 4 1_555 0.637 -0.198 -0.221 -10.044 -7.884 -0.445 18 C_DC9:DG16_D C 9 ? D 16 ? 19 1 1 C DG 10 1_555 D DC 3 1_555 -0.372 -0.080 0.399 5.042 -2.928 -2.414 19 C_DG10:DC15_D C 10 ? D 15 ? 19 1 1 C DC 11 1_555 D DG 2 1_555 0.182 -0.218 -0.084 5.955 3.918 -1.384 20 C_DC11:DG14_D C 11 ? D 14 ? 19 1 1 E DG 2 1_555 F DC 11 1_555 -0.337 -0.266 -0.010 -9.392 -3.228 -4.258 21 E_DG2:DC23_F E 2 ? F 23 ? 19 1 1 E DC 3 1_555 F DG 10 1_555 0.179 0.017 0.125 -2.303 -6.979 0.212 22 E_DC3:DG22_F E 3 ? F 22 ? 19 1 1 E DG 4 1_555 F DC 9 1_555 -0.181 0.068 -0.427 6.539 -15.859 5.326 23 E_DG4:DC21_F E 4 ? F 21 ? 19 1 1 E DA 5 1_555 F DT 8 1_555 0.337 -0.114 -0.323 11.604 -18.023 1.660 24 E_DA5:DT20_F E 5 ? F 20 ? 20 1 1 E DA 6 1_555 F DT 7 1_555 -0.460 -0.202 -0.083 -1.947 -20.586 6.363 25 E_DA6:DT19_F E 6 ? F 19 ? 20 1 1 E DT 7 1_555 F DA 6 1_555 -0.491 -0.123 -0.048 0.386 -19.023 1.566 26 E_DT7:DA18_F E 7 ? F 18 ? 20 1 1 E DT 8 1_555 F DA 5 1_555 -0.026 -0.135 -0.260 -4.249 -14.859 3.619 27 E_DT8:DA17_F E 8 ? F 17 ? 20 1 1 E DC 9 1_555 F DG 4 1_555 -0.251 -0.009 0.146 -4.981 -10.867 -0.423 28 E_DC9:DG16_F E 9 ? F 16 ? 19 1 1 E DG 10 1_555 F DC 3 1_555 -0.430 0.089 0.476 1.870 -6.132 1.513 29 E_DG10:DC15_F E 10 ? F 15 ? 19 1 1 E DC 11 1_555 F DG 2 1_555 0.318 -0.249 0.243 5.808 4.559 1.186 30 E_DC11:DG14_F E 11 ? F 14 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 2 1_555 B DC 11 1_555 A DC 3 1_555 B DG 10 1_555 1.047 0.558 3.281 -3.116 -7.694 37.510 1.784 -1.971 3.019 -11.788 4.774 38.385 1 AA_DG2DC3:DG22DC23_BB A 2 ? B 23 ? A 3 ? B 22 ? 1 A DC 3 1_555 B DG 10 1_555 A DG 4 1_555 B DC 9 1_555 -0.426 0.732 3.062 5.973 10.280 24.238 -0.975 2.393 2.940 22.810 -13.253 26.958 2 AA_DC3DG4:DC21DG22_BB A 3 ? B 22 ? A 4 ? B 21 ? 1 A DG 4 1_555 B DC 9 1_555 A DA 5 1_555 B DT 8 1_555 0.049 0.087 3.166 -2.443 -0.119 39.258 0.143 -0.354 3.157 -0.177 3.632 39.331 3 AA_DG4DA5:DT20DC21_BB A 4 ? B 21 ? A 5 ? B 20 ? 1 A DA 5 1_555 B DT 8 1_555 A DA 6 1_555 B DT 7 1_555 -0.271 -0.269 3.370 -0.636 2.004 40.054 -0.627 0.321 3.357 2.924 0.928 40.107 4 AA_DA5DA6:DT19DT20_BB A 5 ? B 20 ? A 6 ? B 19 ? 1 A DA 6 1_555 B DT 7 1_555 A DT 7 1_555 B DA 6 1_555 0.128 -0.638 3.259 0.078 3.625 29.637 -1.981 -0.233 3.161 7.053 -0.153 29.853 5 AA_DA6DT7:DA18DT19_BB A 6 ? B 19 ? A 7 ? B 18 ? 1 A DT 7 1_555 B DA 6 1_555 A DT 8 1_555 B DA 5 1_555 0.138 0.043 3.113 2.908 -1.516 41.244 0.215 0.102 3.112 -2.149 -4.121 41.369 6 AA_DT7DT8:DA17DA18_BB A 7 ? B 18 ? A 8 ? B 17 ? 1 A DT 8 1_555 B DA 5 1_555 A DC 9 1_555 B DG 4 1_555 -0.183 -0.042 3.530 -2.446 3.994 37.269 -0.628 -0.061 3.511 6.220 3.809 37.552 7 AA_DT8DC9:DG16DA17_BB A 8 ? B 17 ? A 9 ? B 16 ? 1 A DC 9 1_555 B DG 4 1_555 A DG 10 1_555 B DC 3 1_555 0.411 0.676 3.087 -2.758 1.741 33.836 0.894 -1.118 3.075 2.982 4.725 33.989 8 AA_DC9DG10:DC15DG16_BB A 9 ? B 16 ? A 10 ? B 15 ? 1 A DG 10 1_555 B DC 3 1_555 A DC 11 1_555 B DG 2 1_555 -0.417 -0.313 3.344 -0.482 -0.598 31.304 -0.465 0.679 3.355 -1.109 0.893 31.313 9 AA_DG10DC11:DG14DC15_BB A 10 ? B 15 ? A 11 ? B 14 ? 1 C DG 2 1_555 D DC 11 1_555 C DC 3 1_555 D DG 10 1_555 0.964 0.607 3.325 -0.742 -8.184 41.054 1.705 -1.427 3.136 -11.530 1.046 41.834 10 CC_DG2DC3:DG22DC23_DD C 2 ? D 23 ? C 3 ? D 22 ? 1 C DC 3 1_555 D DG 10 1_555 C DG 4 1_555 D DC 9 1_555 -0.435 0.918 2.893 4.726 5.844 28.875 0.685 1.734 2.912 11.476 -9.281 29.817 11 CC_DC3DG4:DC21DG22_DD C 3 ? D 22 ? C 4 ? D 21 ? 1 C DG 4 1_555 D DC 9 1_555 C DA 5 1_555 D DT 8 1_555 -0.200 0.022 3.487 2.480 7.419 36.069 -1.036 0.674 3.404 11.811 -3.949 36.880 12 CC_DG4DA5:DT20DC21_DD C 4 ? D 21 ? C 5 ? D 20 ? 1 C DA 5 1_555 D DT 8 1_555 C DA 6 1_555 D DT 7 1_555 -0.177 -0.036 3.116 -3.309 3.096 36.866 -0.451 -0.144 3.107 4.872 5.209 37.134 13 CC_DA5DA6:DT19DT20_DD C 5 ? D 20 ? C 6 ? D 19 ? 1 C DA 6 1_555 D DT 7 1_555 C DT 7 1_555 D DA 6 1_555 0.214 -0.609 3.358 -0.857 2.292 35.800 -1.323 -0.472 3.308 3.723 1.392 35.881 14 CC_DA6DT7:DA18DT19_DD C 6 ? D 19 ? C 7 ? D 18 ? 1 C DT 7 1_555 D DA 6 1_555 C DT 8 1_555 D DA 5 1_555 0.145 -0.239 3.176 1.561 0.806 38.069 -0.466 -0.030 3.174 1.235 -2.392 38.108 15 CC_DT7DT8:DA17DA18_DD C 7 ? D 18 ? C 8 ? D 17 ? 1 C DT 8 1_555 D DA 5 1_555 C DC 9 1_555 D DG 4 1_555 0.058 0.023 3.258 2.265 -0.316 38.945 0.072 0.186 3.256 -0.473 -3.394 39.009 16 CC_DT8DC9:DG16DA17_DD C 8 ? D 17 ? C 9 ? D 16 ? 1 C DC 9 1_555 D DG 4 1_555 C DG 10 1_555 D DC 3 1_555 0.087 0.397 2.877 -2.475 9.278 26.106 -1.182 -0.717 2.829 19.711 5.259 27.787 17 CC_DC9DG10:DC15DG16_DD C 9 ? D 16 ? C 10 ? D 15 ? 1 C DG 10 1_555 D DC 3 1_555 C DC 11 1_555 D DG 2 1_555 -0.103 -0.466 3.430 3.141 2.752 33.259 -1.279 0.717 3.359 4.785 -5.460 33.513 18 CC_DG10DC11:DG14DC15_DD C 10 ? D 15 ? C 11 ? D 14 ? 1 E DG 2 1_555 F DC 11 1_555 E DC 3 1_555 F DG 10 1_555 0.790 0.605 3.281 0.731 -10.220 39.567 1.975 -1.054 3.052 -14.799 -1.058 40.821 19 EE_DG2DC3:DG22DC23_FF E 2 ? F 23 ? E 3 ? F 22 ? 1 E DC 3 1_555 F DG 10 1_555 E DG 4 1_555 F DC 9 1_555 -0.082 1.030 3.229 4.568 11.676 26.214 -0.656 1.224 3.318 24.069 -9.416 29.010 20 EE_DC3DG4:DC21DG22_FF E 3 ? F 22 ? E 4 ? F 21 ? 1 E DG 4 1_555 F DC 9 1_555 E DA 5 1_555 F DT 8 1_555 -0.493 0.212 3.008 -2.655 3.865 39.562 -0.103 0.439 3.040 5.686 3.905 39.828 21 EE_DG4DA5:DT20DC21_FF E 4 ? F 21 ? E 5 ? F 20 ? 1 E DA 5 1_555 F DT 8 1_555 E DA 6 1_555 F DT 7 1_555 -0.062 -0.227 3.463 -4.494 6.070 35.695 -1.251 -0.558 3.364 9.767 7.232 36.460 22 EE_DA5DA6:DT19DT20_FF E 5 ? F 20 ? E 6 ? F 19 ? 1 E DA 6 1_555 F DT 7 1_555 E DT 7 1_555 F DA 6 1_555 -0.037 -0.535 3.170 -0.731 -2.666 33.122 -0.500 -0.055 3.202 -4.667 1.280 33.234 23 EE_DA6DT7:DA18DT19_FF E 6 ? F 19 ? E 7 ? F 18 ? 1 E DT 7 1_555 F DA 6 1_555 E DT 8 1_555 F DA 5 1_555 0.724 -0.015 3.258 6.839 -1.622 42.696 0.140 -0.305 3.329 -2.209 -9.318 43.244 24 EE_DT7DT8:DA17DA18_FF E 7 ? F 18 ? E 8 ? F 17 ? 1 E DT 8 1_555 F DA 5 1_555 E DC 9 1_555 F DG 4 1_555 -0.185 -0.363 3.254 -2.604 4.887 29.959 -1.657 -0.162 3.161 9.353 4.984 30.455 25 EE_DT8DC9:DG16DA17_FF E 8 ? F 17 ? E 9 ? F 16 ? 1 E DC 9 1_555 F DG 4 1_555 E DG 10 1_555 F DC 3 1_555 0.098 0.595 3.201 -4.000 5.598 32.960 0.121 -0.817 3.222 9.734 6.956 33.650 26 EE_DC9DG10:DC15DG16_FF E 9 ? F 16 ? E 10 ? F 15 ? 1 E DG 10 1_555 F DC 3 1_555 E DC 11 1_555 F DG 2 1_555 -0.227 -0.567 3.344 -0.547 1.957 31.700 -1.401 0.313 3.307 3.578 1.001 31.763 27 EE_DG10DC11:DG14DC15_FF E 10 ? F 15 ? E 11 ? F 14 ? # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id IK7 _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id IK7 _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3U2N _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 7Z9P _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.025923 _atom_sites.fract_transf_matrix[1][2] -0.014006 _atom_sites.fract_transf_matrix[1][3] 0.007318 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.028190 _atom_sites.fract_transf_matrix[2][3] -0.017624 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.029097 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N NA O P S ZN # loop_