HEADER HYDROLASE 31-MAR-22 7ZEG TITLE HUMAN CYTOSOLIC 5' NUCLEOTIDASE IIIB IN COMPLEX WITH 3,4-DIF-BN7GMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: 7-METHYLGUANOSINE PHOSPHATE-SPECIFIC 5'-NUCLEOTIDASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 7-METHYLGUANOSINE NUCLEOTIDASE,CYTOSOLIC 5'-NUCLEOTIDASE 3B, COMPND 5 CYTOSOLIC 5'-NUCLEOTIDASE III-LIKE PROTEIN,CN-III-LIKE PROTEIN,N(7)- COMPND 6 METHYLGUANYLATE 5'-PHOSPHATASE; COMPND 7 EC: 3.1.3.91,3.1.3.5; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NT5C3B, NT5C3L; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CYTOSOLIC 5' NUCLEOTIDASE, N7 METHYLGUANOSINE MONOPHOSPHATE KEYWDS 2 DEPHOSPHORYLATION, MRNA CAP DEGRADATION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR D.KUBACKA,M.KOZARSKI,M.R.BARANOWSKI,R.WOJCIK,J.JEMIELITY,J.KOWALSKA, AUTHOR 2 J.BASQUIN REVDAT 4 31-JAN-24 7ZEG 1 REMARK REVDAT 3 08-JUN-22 7ZEG 1 JRNL REVDAT 2 25-MAY-22 7ZEG 1 JRNL REVDAT 1 13-APR-22 7ZEG 0 JRNL AUTH D.KUBACKA,M.KOZARSKI,M.R.BARANOWSKI,R.WOJCIK, JRNL AUTH 2 J.PANECKA-HOFMAN,D.STRZELECKA,J.BASQUIN,J.JEMIELITY, JRNL AUTH 3 J.KOWALSKA JRNL TITL SUBSTRATE-BASED DESIGN OF CYTOSOLIC NUCLEOTIDASE IIIB JRNL TITL 2 INHIBITORS AND STRUCTURAL INSIGHTS INTO INHIBITION JRNL TITL 3 MECHANISM. JRNL REF PHARMACEUTICALS V. 15 2022 JRNL REFN ESSN 1424-8247 JRNL PMID 35631380 JRNL DOI 10.3390/PH15050554 REMARK 2 REMARK 2 RESOLUTION. 1.56 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.56 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 84906 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.241 REMARK 3 R VALUE (WORKING SET) : 0.240 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.690 REMARK 3 FREE R VALUE TEST SET COUNT : 3129 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.6900 - 4.3600 1.00 3846 148 0.2198 0.2381 REMARK 3 2 4.3600 - 3.4600 1.00 3760 144 0.1923 0.2058 REMARK 3 3 3.4600 - 3.0200 1.00 3767 144 0.2213 0.2615 REMARK 3 4 3.0200 - 2.7500 1.00 3748 143 0.2342 0.2639 REMARK 3 5 2.7500 - 2.5500 1.00 3706 142 0.2385 0.2717 REMARK 3 6 2.5500 - 2.4000 1.00 3764 143 0.2399 0.2521 REMARK 3 7 2.4000 - 2.2800 1.00 3746 144 0.2348 0.2907 REMARK 3 8 2.2800 - 2.1800 1.00 3755 143 0.2431 0.3203 REMARK 3 9 2.1800 - 2.1000 1.00 3731 143 0.2446 0.2756 REMARK 3 10 2.1000 - 2.0200 1.00 3719 143 0.2487 0.3173 REMARK 3 11 2.0200 - 1.9600 1.00 3760 144 0.2509 0.2970 REMARK 3 12 1.9600 - 1.9000 1.00 3725 143 0.2708 0.3046 REMARK 3 13 1.9000 - 1.8500 1.00 3699 141 0.2779 0.3676 REMARK 3 14 1.8500 - 1.8100 1.00 3751 144 0.2759 0.3240 REMARK 3 15 1.8100 - 1.7700 0.99 3690 142 0.2948 0.3498 REMARK 3 16 1.7700 - 1.7300 0.99 3737 141 0.3073 0.3606 REMARK 3 17 1.7300 - 1.7000 0.99 3668 140 0.3333 0.3942 REMARK 3 18 1.7000 - 1.6600 0.99 3720 142 0.3440 0.3993 REMARK 3 19 1.6600 - 1.6300 0.99 3700 142 0.3727 0.4459 REMARK 3 20 1.6300 - 1.6100 0.99 3735 144 0.3952 0.4177 REMARK 3 21 1.6100 - 1.5800 0.99 3667 140 0.4158 0.4485 REMARK 3 22 1.5800 - 1.5600 0.91 3383 129 0.4636 0.4999 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.285 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 36.571 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.02 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 4543 REMARK 3 ANGLE : 0.636 6149 REMARK 3 CHIRALITY : 0.047 688 REMARK 3 PLANARITY : 0.004 787 REMARK 3 DIHEDRAL : 10.747 2688 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN 'A' AND ((RESID 7 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 8 THROUGH 9 OR (RESID 10 THROUGH REMARK 3 11 AND (NAME N OR NAME CA OR NAME C OR REMARK 3 NAME O OR NAME CB )) OR RESID 12 THROUGH REMARK 3 16 OR (RESID 17 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 18 THROUGH 22 OR (RESID 23 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 24 THROUGH 29 OR (RESID 30 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 31 THROUGH 34 OR REMARK 3 (RESID 35 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 36 REMARK 3 THROUGH 71 OR (RESID 72 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 73 THROUGH 95 OR (RESID 96 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 97 THROUGH 138 OR REMARK 3 (RESID 139 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 140 REMARK 3 THROUGH 170 OR (RESID 171 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 172 THROUGH 210 OR RESID 221 REMARK 3 THROUGH 243 OR (RESID 244 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 245 THROUGH 252 OR (RESID 253 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 254 THROUGH 259 REMARK 3 OR (RESID 260 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 261 THROUGH 279 OR (RESID 280 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 281 THROUGH 289 OR (RESID 290 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 401 THROUGH 501)) REMARK 3 SELECTION : (CHAIN 'B' AND (RESID 7 THROUGH 70 OR REMARK 3 (RESID 71 THROUGH 72 AND (NAME N OR NAME REMARK 3 CA OR NAME C OR NAME O OR NAME CB )) OR REMARK 3 RESID 73 THROUGH 128 OR (RESID 129 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 130 THROUGH 210 OR REMARK 3 RESID 221 THROUGH 290 OR RESID 501 REMARK 3 THROUGH 601)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ZEG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-APR-22. REMARK 100 THE DEPOSITION ID IS D_1292122064. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-FEB-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 85124 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.556 REMARK 200 RESOLUTION RANGE LOW (A) : 40.690 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.09054 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.6600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.56 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.61 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.680 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2BDU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG 3350, 0.1M MES PH 6.2, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 39.56750 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLU A 3 REMARK 465 GLU A 211 REMARK 465 ASN A 212 REMARK 465 SER A 213 REMARK 465 GLY A 214 REMARK 465 TYR A 215 REMARK 465 PHE A 216 REMARK 465 GLN A 217 REMARK 465 GLN A 218 REMARK 465 VAL A 293 REMARK 465 GLN A 294 REMARK 465 LEU A 295 REMARK 465 GLU A 296 REMARK 465 MET A 297 REMARK 465 GLN A 298 REMARK 465 GLY A 299 REMARK 465 PRO A 300 REMARK 465 ARG B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 GLU B 3 REMARK 465 GLU B 4 REMARK 465 VAL B 5 REMARK 465 SER B 6 REMARK 465 GLY B 214 REMARK 465 TYR B 215 REMARK 465 PHE B 216 REMARK 465 GLN B 217 REMARK 465 GLN B 218 REMARK 465 LEU B 219 REMARK 465 GLU B 220 REMARK 465 GLN B 291 REMARK 465 GLY B 292 REMARK 465 VAL B 293 REMARK 465 GLN B 294 REMARK 465 LEU B 295 REMARK 465 GLU B 296 REMARK 465 MET B 297 REMARK 465 GLN B 298 REMARK 465 GLY B 299 REMARK 465 PRO B 300 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 54 CG CD CE NZ REMARK 470 LYS A 67 CG CD CE NZ REMARK 470 GLU A 71 CG CD OE1 OE2 REMARK 470 LYS A 75 CG CD CE NZ REMARK 470 LYS A 120 CG CD CE NZ REMARK 470 GLU A 129 CG CD OE1 OE2 REMARK 470 GLU A 188 CG CD OE1 OE2 REMARK 470 GLN A 198 CG CD OE1 NE2 REMARK 470 LEU A 219 CG CD1 CD2 REMARK 470 GLU A 220 CG CD OE1 OE2 REMARK 470 THR B 7 OG1 CG2 REMARK 470 LYS B 10 CG CD CE NZ REMARK 470 GLN B 17 CG CD OE1 NE2 REMARK 470 GLU B 23 CG CD OE1 OE2 REMARK 470 LYS B 30 CG CD CE NZ REMARK 470 ARG B 35 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 54 CG CD CE NZ REMARK 470 LYS B 67 CG CD CE NZ REMARK 470 GLU B 72 CG CD OE1 OE2 REMARK 470 LYS B 75 CG CD CE NZ REMARK 470 LYS B 96 CG CD CE NZ REMARK 470 LYS B 120 CG CD CE NZ REMARK 470 LYS B 139 CG CD CE NZ REMARK 470 LYS B 171 CG CD CE NZ REMARK 470 GLU B 188 CG CD OE1 OE2 REMARK 470 GLN B 198 CG CD OE1 NE2 REMARK 470 GLU B 211 CG CD OE1 OE2 REMARK 470 ASN B 212 CG OD1 ND2 REMARK 470 SER B 213 OG REMARK 470 VAL B 244 CG1 CG2 REMARK 470 LEU B 253 CG CD1 CD2 REMARK 470 ARG B 260 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 280 CG1 CG2 REMARK 470 CYS B 290 SG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 42 -68.15 -96.54 REMARK 500 SER A 181 -169.78 -162.91 REMARK 500 HIS A 201 -167.80 -113.54 REMARK 500 PHE B 42 -68.71 -98.55 REMARK 500 HIS B 201 -166.94 -112.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 749 DISTANCE = 6.54 ANGSTROMS REMARK 525 HOH B 636 DISTANCE = 6.15 ANGSTROMS REMARK 525 HOH B 637 DISTANCE = 6.21 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 404 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 41 OD2 REMARK 620 2 ASP A 43 O 85.2 REMARK 620 3 ASP A 230 OD1 87.2 84.9 REMARK 620 4 HOH A 530 O 93.0 169.5 84.7 REMARK 620 5 HOH A 553 O 90.3 101.4 173.0 88.9 REMARK 620 6 HOH A 615 O 175.1 89.9 91.8 91.7 91.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 405 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 41 OD2 REMARK 620 2 ASP B 43 O 88.7 REMARK 620 3 ASP B 230 OD1 83.4 92.3 REMARK 620 4 HOH B 520 O 86.0 168.4 76.8 REMARK 620 5 HOH B 552 O 171.8 83.4 94.9 101.5 REMARK 620 6 HOH B 556 O 90.3 91.7 172.4 98.6 92.0 REMARK 620 N 1 2 3 4 5 DBREF 7ZEG A 1 300 UNP Q969T7 5NT3B_HUMAN 1 300 DBREF 7ZEG B 1 300 UNP Q969T7 5NT3B_HUMAN 1 300 SEQADV 7ZEG ARG A -1 UNP Q969T7 EXPRESSION TAG SEQADV 7ZEG SER A 0 UNP Q969T7 EXPRESSION TAG SEQADV 7ZEG ARG B -1 UNP Q969T7 EXPRESSION TAG SEQADV 7ZEG SER B 0 UNP Q969T7 EXPRESSION TAG SEQRES 1 A 302 ARG SER MET ALA GLU GLU VAL SER THR LEU MET LYS ALA SEQRES 2 A 302 THR VAL LEU MET ARG GLN PRO GLY ARG VAL GLN GLU ILE SEQRES 3 A 302 VAL GLY ALA LEU ARG LYS GLY GLY GLY ASP ARG LEU GLN SEQRES 4 A 302 VAL ILE SER ASP PHE ASP MET THR LEU SER ARG PHE ALA SEQRES 5 A 302 TYR ASN GLY LYS ARG CYS PRO SER SER TYR ASN ILE LEU SEQRES 6 A 302 ASP ASN SER LYS ILE ILE SER GLU GLU CYS ARG LYS GLU SEQRES 7 A 302 LEU THR ALA LEU LEU HIS HIS TYR TYR PRO ILE GLU ILE SEQRES 8 A 302 ASP PRO HIS ARG THR VAL LYS GLU LYS LEU PRO HIS MET SEQRES 9 A 302 VAL GLU TRP TRP THR LYS ALA HIS ASN LEU LEU CYS GLN SEQRES 10 A 302 GLN LYS ILE GLN LYS PHE GLN ILE ALA GLN VAL VAL ARG SEQRES 11 A 302 GLU SER ASN ALA MET LEU ARG GLU GLY TYR LYS THR PHE SEQRES 12 A 302 PHE ASN THR LEU TYR HIS ASN ASN ILE PRO LEU PHE ILE SEQRES 13 A 302 PHE SER ALA GLY ILE GLY ASP ILE LEU GLU GLU ILE ILE SEQRES 14 A 302 ARG GLN MET LYS VAL PHE HIS PRO ASN ILE HIS ILE VAL SEQRES 15 A 302 SER ASN TYR MET ASP PHE ASN GLU ASP GLY PHE LEU GLN SEQRES 16 A 302 GLY PHE LYS GLY GLN LEU ILE HIS THR TYR ASN LYS ASN SEQRES 17 A 302 SER SER ALA CYS GLU ASN SER GLY TYR PHE GLN GLN LEU SEQRES 18 A 302 GLU GLY LYS THR ASN VAL ILE LEU LEU GLY ASP SER ILE SEQRES 19 A 302 GLY ASP LEU THR MET ALA ASP GLY VAL PRO GLY VAL GLN SEQRES 20 A 302 ASN ILE LEU LYS ILE GLY PHE LEU ASN ASP LYS VAL GLU SEQRES 21 A 302 GLU ARG ARG GLU ARG TYR MET ASP SER TYR ASP ILE VAL SEQRES 22 A 302 LEU GLU LYS ASP GLU THR LEU ASP VAL VAL ASN GLY LEU SEQRES 23 A 302 LEU GLN HIS ILE LEU CYS GLN GLY VAL GLN LEU GLU MET SEQRES 24 A 302 GLN GLY PRO SEQRES 1 B 302 ARG SER MET ALA GLU GLU VAL SER THR LEU MET LYS ALA SEQRES 2 B 302 THR VAL LEU MET ARG GLN PRO GLY ARG VAL GLN GLU ILE SEQRES 3 B 302 VAL GLY ALA LEU ARG LYS GLY GLY GLY ASP ARG LEU GLN SEQRES 4 B 302 VAL ILE SER ASP PHE ASP MET THR LEU SER ARG PHE ALA SEQRES 5 B 302 TYR ASN GLY LYS ARG CYS PRO SER SER TYR ASN ILE LEU SEQRES 6 B 302 ASP ASN SER LYS ILE ILE SER GLU GLU CYS ARG LYS GLU SEQRES 7 B 302 LEU THR ALA LEU LEU HIS HIS TYR TYR PRO ILE GLU ILE SEQRES 8 B 302 ASP PRO HIS ARG THR VAL LYS GLU LYS LEU PRO HIS MET SEQRES 9 B 302 VAL GLU TRP TRP THR LYS ALA HIS ASN LEU LEU CYS GLN SEQRES 10 B 302 GLN LYS ILE GLN LYS PHE GLN ILE ALA GLN VAL VAL ARG SEQRES 11 B 302 GLU SER ASN ALA MET LEU ARG GLU GLY TYR LYS THR PHE SEQRES 12 B 302 PHE ASN THR LEU TYR HIS ASN ASN ILE PRO LEU PHE ILE SEQRES 13 B 302 PHE SER ALA GLY ILE GLY ASP ILE LEU GLU GLU ILE ILE SEQRES 14 B 302 ARG GLN MET LYS VAL PHE HIS PRO ASN ILE HIS ILE VAL SEQRES 15 B 302 SER ASN TYR MET ASP PHE ASN GLU ASP GLY PHE LEU GLN SEQRES 16 B 302 GLY PHE LYS GLY GLN LEU ILE HIS THR TYR ASN LYS ASN SEQRES 17 B 302 SER SER ALA CYS GLU ASN SER GLY TYR PHE GLN GLN LEU SEQRES 18 B 302 GLU GLY LYS THR ASN VAL ILE LEU LEU GLY ASP SER ILE SEQRES 19 B 302 GLY ASP LEU THR MET ALA ASP GLY VAL PRO GLY VAL GLN SEQRES 20 B 302 ASN ILE LEU LYS ILE GLY PHE LEU ASN ASP LYS VAL GLU SEQRES 21 B 302 GLU ARG ARG GLU ARG TYR MET ASP SER TYR ASP ILE VAL SEQRES 22 B 302 LEU GLU LYS ASP GLU THR LEU ASP VAL VAL ASN GLY LEU SEQRES 23 B 302 LEU GLN HIS ILE LEU CYS GLN GLY VAL GLN LEU GLU MET SEQRES 24 B 302 GLN GLY PRO HET IOO A 401 33 HET EDO A 402 4 HET EDO A 403 4 HET MG A 404 1 HET IOO B 401 33 HET EDO B 402 4 HET EDO B 403 4 HET EDO B 404 4 HET MG B 405 1 HETNAM IOO N7-(3,4-DIFLUOROBENZYL) GUANOSINE 5'-MONOPHOSPHATE HETNAM EDO 1,2-ETHANEDIOL HETNAM MG MAGNESIUM ION HETSYN IOO [(2R,3S,4R,5R)-5-[2-AZANYL-7-[[3,4-BIS(FLUORANYL) HETSYN 2 IOO PHENYL]METHYL]-6-OXIDANYLIDENE-1H-PURIN-7-IUM-9-YL]-3, HETSYN 3 IOO 4-BIS(OXIDANYL)OXOLAN-2-YL]METHYL DIHYDROGEN PHOSPHATE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 IOO 2(C17 H19 F2 N5 O8 P 1+) FORMUL 4 EDO 5(C2 H6 O2) FORMUL 6 MG 2(MG 2+) FORMUL 12 HOH *386(H2 O) HELIX 1 AA1 VAL A 5 LYS A 10 5 6 HELIX 2 AA2 GLN A 17 GLY A 32 1 16 HELIX 3 AA3 SER A 58 ASN A 65 1 8 HELIX 4 AA4 SER A 70 ILE A 89 1 20 HELIX 5 AA5 LYS A 98 GLN A 115 1 18 HELIX 6 AA6 PHE A 121 SER A 130 1 10 HELIX 7 AA7 GLY A 137 ASN A 148 1 12 HELIX 8 AA8 GLY A 160 MET A 170 1 11 HELIX 9 AA9 ASN A 206 CYS A 210 5 5 HELIX 10 AB1 ILE A 232 MET A 237 5 6 HELIX 11 AB2 LYS A 256 TYR A 268 1 13 HELIX 12 AB3 LEU A 278 CYS A 290 1 13 HELIX 13 AB4 GLN B 17 GLY B 32 1 16 HELIX 14 AB5 SER B 58 ASN B 65 1 8 HELIX 15 AB6 SER B 70 ILE B 89 1 20 HELIX 16 AB7 LYS B 98 GLN B 115 1 18 HELIX 17 AB8 PHE B 121 SER B 130 1 10 HELIX 18 AB9 GLY B 137 ASN B 148 1 12 HELIX 19 AC1 GLY B 160 MET B 170 1 11 HELIX 20 AC2 ASN B 206 CYS B 210 5 5 HELIX 21 AC3 ILE B 232 MET B 237 5 6 HELIX 22 AC4 LYS B 256 TYR B 268 1 13 HELIX 23 AC5 LEU B 278 CYS B 290 1 13 SHEET 1 AA1 7 VAL A 13 LEU A 14 0 SHEET 2 AA1 7 ILE A 270 GLU A 273 -1 O VAL A 271 N LEU A 14 SHEET 3 AA1 7 ASN A 246 LEU A 253 1 N GLY A 251 O ILE A 270 SHEET 4 AA1 7 ASN A 224 GLY A 229 1 N LEU A 227 O ILE A 250 SHEET 5 AA1 7 LEU A 36 ASP A 41 1 N ILE A 39 O ILE A 226 SHEET 6 AA1 7 LEU A 152 ILE A 159 1 O PHE A 153 N SER A 40 SHEET 7 AA1 7 ILE A 177 ASN A 182 1 O VAL A 180 N ILE A 154 SHEET 1 AA2 2 ALA A 50 TYR A 51 0 SHEET 2 AA2 2 LYS A 54 ARG A 55 -1 O LYS A 54 N TYR A 51 SHEET 1 AA3 2 MET A 184 PHE A 186 0 SHEET 2 AA3 2 LEU A 192 PHE A 195 -1 O GLN A 193 N ASP A 185 SHEET 1 AA4 8 VAL B 13 LEU B 14 0 SHEET 2 AA4 8 ILE B 270 GLU B 273 -1 O VAL B 271 N LEU B 14 SHEET 3 AA4 8 ASN B 246 LEU B 253 1 N LEU B 253 O LEU B 272 SHEET 4 AA4 8 ASN B 224 GLY B 229 1 N LEU B 227 O LEU B 248 SHEET 5 AA4 8 LEU B 36 ASP B 41 1 N ILE B 39 O ILE B 226 SHEET 6 AA4 8 LEU B 152 ILE B 159 1 O PHE B 153 N SER B 40 SHEET 7 AA4 8 ILE B 177 PHE B 186 1 O VAL B 180 N ILE B 154 SHEET 8 AA4 8 LEU B 192 LYS B 196 -1 O GLN B 193 N ASP B 185 SHEET 1 AA5 2 ALA B 50 TYR B 51 0 SHEET 2 AA5 2 LYS B 54 ARG B 55 -1 O LYS B 54 N TYR B 51 LINK OD2 ASP A 41 MG MG A 404 1555 1555 2.03 LINK O ASP A 43 MG MG A 404 1555 1555 2.09 LINK OD1 ASP A 230 MG MG A 404 1555 1555 2.12 LINK MG MG A 404 O HOH A 530 1555 1555 2.22 LINK MG MG A 404 O HOH A 553 1555 1555 1.99 LINK MG MG A 404 O HOH A 615 1555 1555 2.24 LINK OD2 ASP B 41 MG MG B 405 1555 1555 2.00 LINK O ASP B 43 MG MG B 405 1555 1555 2.09 LINK OD1 ASP B 230 MG MG B 405 1555 1555 2.15 LINK MG MG B 405 O HOH B 520 1555 1555 1.96 LINK MG MG B 405 O HOH B 552 1555 1555 2.00 LINK MG MG B 405 O HOH B 556 1555 1555 1.98 CRYST1 40.755 79.135 94.388 90.00 93.23 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024537 0.000000 0.001383 0.00000 SCALE2 0.000000 0.012637 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010611 0.00000