HEADER RNA BINDING PROTEIN 04-APR-22 7ZGV TITLE SERRATIA NUCC BOUND TO CA3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERRATIA NUCC; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: RNA (5'-R(P*AP*AP*A)-3'); COMPND 7 CHAIN: D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SERRATIA; SOURCE 3 ORGANISM_TAXID: 613; SOURCE 4 GENE: CWC46_19930, SER39006_019925; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: SERRATIA; SOURCE 10 ORGANISM_TAXID: 613 KEYWDS NUCLEASE, RNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.GARCIA-DOVAL,D.MAYO-MUNOZ,L.M.SMITH,P.C.FINERAN REVDAT 3 07-FEB-24 7ZGV 1 REMARK REVDAT 2 10-MAY-23 7ZGV 1 JRNL REVDAT 1 26-OCT-22 7ZGV 0 JRNL AUTH D.MAYO-MUNOZ,L.M.SMITH,C.GARCIA-DOVAL,L.M.MALONE, JRNL AUTH 2 K.R.HARDING,S.A.JACKSON,H.G.HAMPTON,R.D.FAGERLUND,L.F.GUMY, JRNL AUTH 3 P.C.FINERAN JRNL TITL TYPE III CRISPR-CAS PROVIDES RESISTANCE AGAINST JRNL TITL 2 NUCLEUS-FORMING JUMBO PHAGES VIA ABORTIVE INFECTION. JRNL REF MOL.CELL V. 82 4471 2022 JRNL REFN ISSN 1097-2765 JRNL PMID 36395770 JRNL DOI 10.1016/J.MOLCEL.2022.10.028 REMARK 2 REMARK 2 RESOLUTION. 1.48 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.48 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 40112 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.181 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.890 REMARK 3 FREE R VALUE TEST SET COUNT : 1962 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.8500 - 3.5700 1.00 2843 143 0.1488 0.1466 REMARK 3 2 3.5700 - 2.8300 1.00 2754 150 0.1503 0.1973 REMARK 3 3 2.8300 - 2.4700 1.00 2737 140 0.1552 0.1753 REMARK 3 4 2.4700 - 2.2500 1.00 2732 143 0.1451 0.1817 REMARK 3 5 2.2500 - 2.0900 1.00 2727 121 0.1409 0.1615 REMARK 3 6 2.0900 - 1.9600 1.00 2729 138 0.1542 0.1641 REMARK 3 7 1.9600 - 1.8700 1.00 2706 135 0.1565 0.1767 REMARK 3 8 1.8600 - 1.7800 1.00 2720 140 0.1625 0.1947 REMARK 3 9 1.7800 - 1.7200 1.00 2709 141 0.1771 0.2133 REMARK 3 10 1.7200 - 1.6600 1.00 2695 143 0.1851 0.2272 REMARK 3 11 1.6600 - 1.6000 1.00 2719 140 0.1837 0.2160 REMARK 3 12 1.6000 - 1.5600 1.00 2657 153 0.2023 0.2239 REMARK 3 13 1.5600 - 1.5200 1.00 2738 142 0.2104 0.2370 REMARK 3 14 1.5200 - 1.4800 1.00 2684 133 0.2266 0.2319 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.143 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.916 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.13 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 2070 REMARK 3 ANGLE : 1.133 2815 REMARK 3 CHIRALITY : 0.080 321 REMARK 3 PLANARITY : 0.011 354 REMARK 3 DIHEDRAL : 13.879 767 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 186 THROUGH 250 ) REMARK 3 ORIGIN FOR THE GROUP (A): 53.0139 78.8508 27.5259 REMARK 3 T TENSOR REMARK 3 T11: 0.1414 T22: 0.1237 REMARK 3 T33: 0.1351 T12: -0.0128 REMARK 3 T13: -0.0078 T23: -0.0367 REMARK 3 L TENSOR REMARK 3 L11: 1.8991 L22: 1.4808 REMARK 3 L33: 0.5750 L12: -1.0464 REMARK 3 L13: 0.6393 L23: -0.4965 REMARK 3 S TENSOR REMARK 3 S11: 0.0524 S12: 0.0817 S13: -0.1207 REMARK 3 S21: -0.1375 S22: -0.0257 S23: 0.0555 REMARK 3 S31: 0.0666 S32: 0.0021 S33: -0.0348 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 3 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.1096 98.9476 20.8580 REMARK 3 T TENSOR REMARK 3 T11: 0.1111 T22: 0.0423 REMARK 3 T33: 0.0371 T12: 0.0043 REMARK 3 T13: 0.0022 T23: -0.0153 REMARK 3 L TENSOR REMARK 3 L11: 0.3413 L22: 0.3029 REMARK 3 L33: 0.0509 L12: 0.0265 REMARK 3 L13: -0.0524 L23: 0.1095 REMARK 3 S TENSOR REMARK 3 S11: 0.0198 S12: -0.0479 S13: 0.0503 REMARK 3 S21: 0.0115 S22: -0.0047 S23: 0.0036 REMARK 3 S31: -0.0632 S32: -0.0034 S33: 0.1227 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 5 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): 70.5137 75.7204 44.9282 REMARK 3 T TENSOR REMARK 3 T11: 0.1016 T22: 0.1239 REMARK 3 T33: 0.1488 T12: 0.0046 REMARK 3 T13: -0.0106 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 0.3826 L22: 1.4348 REMARK 3 L33: 1.2201 L12: 0.5877 REMARK 3 L13: -0.5887 L23: -0.4968 REMARK 3 S TENSOR REMARK 3 S11: 0.0158 S12: -0.1842 S13: -0.1209 REMARK 3 S21: -0.0043 S22: -0.0278 S23: -0.2025 REMARK 3 S31: 0.0070 S32: 0.1844 S33: -0.0490 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 39 THROUGH 165 ) REMARK 3 ORIGIN FOR THE GROUP (A): 47.3735 83.2301 33.3014 REMARK 3 T TENSOR REMARK 3 T11: 0.1067 T22: 0.1093 REMARK 3 T33: 0.1345 T12: -0.0033 REMARK 3 T13: -0.0128 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 0.6060 L22: 1.1320 REMARK 3 L33: 0.6806 L12: -0.1138 REMARK 3 L13: 0.0855 L23: -0.5056 REMARK 3 S TENSOR REMARK 3 S11: 0.0019 S12: -0.0079 S13: -0.0907 REMARK 3 S21: -0.0160 S22: 0.0415 S23: 0.0586 REMARK 3 S31: 0.0408 S32: -0.0500 S33: -0.0449 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 166 THROUGH 185 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.9208 60.3022 32.2731 REMARK 3 T TENSOR REMARK 3 T11: 0.4434 T22: 0.2399 REMARK 3 T33: 0.4760 T12: -0.0119 REMARK 3 T13: 0.0055 T23: -0.0824 REMARK 3 L TENSOR REMARK 3 L11: 5.8264 L22: 5.5802 REMARK 3 L33: 3.8019 L12: 0.1911 REMARK 3 L13: 0.4110 L23: 0.9334 REMARK 3 S TENSOR REMARK 3 S11: -0.0349 S12: 0.5729 S13: -1.0192 REMARK 3 S21: -0.6093 S22: -0.0718 S23: 0.3114 REMARK 3 S31: 1.2531 S32: -0.0812 S33: -0.1024 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ZGV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-APR-22. REMARK 100 THE DEPOSITION ID IS D_1292121303. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-FEB-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS BUILT=20190806 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40117 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.480 REMARK 200 RESOLUTION RANGE LOW (A) : 43.210 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 19.90 REMARK 200 R MERGE (I) : 0.11700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.48 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.51 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.51700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: 6Q1H REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 7.5 0.2 M CALCIUM REMARK 280 ACETATE 25% PEG MME 2000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 57.13250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 32.98546 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 32.02300 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 57.13250 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 32.98546 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 32.02300 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 57.13250 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 32.98546 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 32.02300 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 57.13250 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 32.98546 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 32.02300 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 57.13250 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 32.98546 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 32.02300 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 57.13250 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 32.98546 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 32.02300 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 65.97093 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 64.04600 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 65.97093 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 64.04600 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 65.97093 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 64.04600 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 65.97093 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 64.04600 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 65.97093 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 64.04600 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 65.97093 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 64.04600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 171.39750 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 98.95639 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 197.91279 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 96.06900 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 -1.000000 0.000000 197.91279 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 96.06900 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 6 -0.500000 -0.866025 0.000000 171.39750 REMARK 350 BIOMT2 6 -0.866025 0.500000 0.000000 98.95639 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 96.06900 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 614 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 625 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 632 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 634 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 635 LIES ON A SPECIAL POSITION. REMARK 375 HOH D 106 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A -5 REMARK 465 GLU A -4 REMARK 465 GLU A -3 REMARK 465 LYS A -2 REMARK 465 LEU A -1 REMARK 465 THR A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ASN A 3 REMARK 465 GLN A 4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 9 -97.29 -100.07 REMARK 500 LEU A 95 45.06 -84.80 REMARK 500 SER A 186 39.92 -79.63 REMARK 500 ASP A 188 119.61 -163.42 REMARK 500 GLU A 209 -54.30 75.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 635 DISTANCE = 7.60 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 46 OE2 REMARK 620 2 ASP A 83 OD2 95.7 REMARK 620 3 GLU A 114 OE2 104.2 76.0 REMARK 620 4 VAL A 115 O 175.6 85.8 80.1 REMARK 620 5 ACT A 304 O 86.0 153.4 77.8 94.4 REMARK 620 6 ACT A 304 OXT 90.6 151.0 129.6 86.1 55.2 REMARK 620 7 HOH A 417 O 81.1 75.9 151.8 95.3 130.4 77.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 74 O REMARK 620 2 VAL A 244 O 94.3 REMARK 620 3 ASP A 247 OD1 153.0 80.6 REMARK 620 4 ACT A 303 O 129.8 98.5 77.2 REMARK 620 5 ACT A 303 OXT 80.6 82.5 124.4 53.6 REMARK 620 6 HOH A 458 O 79.0 89.5 74.4 148.9 157.5 REMARK 620 7 HOH A 576 O 86.2 178.5 98.3 82.3 99.0 89.2 REMARK 620 N 1 2 3 4 5 6 DBREF1 7ZGV A 1 250 UNP A0A2I5TBB8_SERS3 DBREF2 7ZGV A A0A2I5TBB8 1 250 DBREF 7ZGV D 1 3 PDB 7ZGV 7ZGV 1 3 SEQADV 7ZGV LYS A -5 UNP A0A2I5TBB EXPRESSION TAG SEQADV 7ZGV GLU A -4 UNP A0A2I5TBB EXPRESSION TAG SEQADV 7ZGV GLU A -3 UNP A0A2I5TBB EXPRESSION TAG SEQADV 7ZGV LYS A -2 UNP A0A2I5TBB EXPRESSION TAG SEQADV 7ZGV LEU A -1 UNP A0A2I5TBB EXPRESSION TAG SEQADV 7ZGV THR A 0 UNP A0A2I5TBB EXPRESSION TAG SEQRES 1 A 256 LYS GLU GLU LYS LEU THR MET THR ASN GLN ALA LYS LYS SEQRES 2 A 256 LEU SER ARG ILE ASN GLY ARG GLU PHE LEU LYS GLN SER SEQRES 3 A 256 PHE ASN LEU GLN GLN GLN LEU LEU ALA SER GLN LEU ASN SEQRES 4 A 256 LEU SER ARG THR ILE THR HIS ASP GLY THR MET GLY GLU SEQRES 5 A 256 VAL ASN GLU SER TYR PHE LEU SER ILE ILE ARG GLN TYR SEQRES 6 A 256 LEU PRO GLU ARG TYR SER VAL ASP ARG GLY VAL VAL VAL SEQRES 7 A 256 ASP SER GLU GLY GLN THR SER ASP GLN ILE ASP ALA VAL SEQRES 8 A 256 ILE PHE ASP ARG HIS TYR THR PRO THR LEU LEU ASP GLN SEQRES 9 A 256 GLN GLY HIS ARG PHE ILE PRO ALA GLU ALA VAL TYR ALA SEQRES 10 A 256 VAL LEU GLU VAL LYS PRO THR ILE ASN LYS THR TYR LEU SEQRES 11 A 256 GLU TYR ALA ALA ASP LYS ALA ALA SER VAL ARG LYS LEU SEQRES 12 A 256 TYR ARG THR SER THR VAL ILE LYS ASN ILE TYR GLY THR SEQRES 13 A 256 ALA LYS PRO VAL GLU HIS PHE PRO ILE VAL ALA GLY ILE SEQRES 14 A 256 VAL ALA ILE ASP VAL GLU TRP GLN ASP GLY LEU GLY LYS SEQRES 15 A 256 ALA PHE THR GLU ASN LEU GLN ALA VAL SER SER ASP GLU SEQRES 16 A 256 ASN ARG LYS LEU ASP CYS GLY LEU ALA VAL SER GLY ALA SEQRES 17 A 256 CYS PHE ASP SER TYR ASP GLU GLU ILE LYS ILE ARG SER SEQRES 18 A 256 GLY GLU ASN ALA LEU ILE PHE PHE LEU PHE ARG LEU LEU SEQRES 19 A 256 GLY LYS LEU GLN SER LEU GLY THR VAL PRO ALA ILE ASP SEQRES 20 A 256 TRP ARG VAL TYR ILE ASP SER LEU GLU SEQRES 1 D 3 A A A HET CA A 301 1 HET CA A 302 1 HET ACT A 303 7 HET ACT A 304 7 HETNAM CA CALCIUM ION HETNAM ACT ACETATE ION FORMUL 3 CA 2(CA 2+) FORMUL 5 ACT 2(C2 H3 O2 1-) FORMUL 7 HOH *241(H2 O) HELIX 1 AA1 ASN A 12 THR A 39 1 28 HELIX 2 AA2 GLU A 49 LEU A 60 1 12 HELIX 3 AA3 ASN A 120 LYS A 136 1 17 HELIX 4 AA4 GLY A 175 SER A 186 1 12 HELIX 5 AA5 ASP A 188 LYS A 192 5 5 HELIX 6 AA6 ASN A 218 GLY A 235 1 18 HELIX 7 AA7 ASP A 241 ILE A 246 5 6 SHEET 1 AA1 8 ARG A 102 PRO A 105 0 SHEET 2 AA1 8 SER A 65 VAL A 72 1 N VAL A 70 O ILE A 104 SHEET 3 AA1 8 ILE A 82 PHE A 87 -1 O ILE A 82 N GLY A 69 SHEET 4 AA1 8 VAL A 109 ILE A 119 -1 O TYR A 110 N ILE A 86 SHEET 5 AA1 8 VAL A 160 VAL A 168 1 O VAL A 164 N LYS A 116 SHEET 6 AA1 8 CYS A 195 ALA A 198 1 O LEU A 197 N ALA A 165 SHEET 7 AA1 8 ALA A 202 ASP A 205 -1 O ALA A 202 N ALA A 198 SHEET 8 AA1 8 LYS A 212 SER A 215 -1 O LYS A 212 N ASP A 205 SHEET 1 AA2 2 ILE A 144 ASN A 146 0 SHEET 2 AA2 2 GLY A 149 ALA A 151 -1 O ALA A 151 N ILE A 144 LINK OE2 GLU A 46 CA CA A 301 1555 1555 2.46 LINK O SER A 74 CA CA A 302 1555 1555 2.33 LINK OD2 ASP A 83 CA CA A 301 1555 1555 2.39 LINK OE2 GLU A 114 CA CA A 301 1555 1555 2.61 LINK O VAL A 115 CA CA A 301 1555 1555 2.34 LINK O VAL A 244 CA CA A 302 1555 1555 2.30 LINK OD1 ASP A 247 CA CA A 302 1555 1555 2.35 LINK CA CA A 301 O ACT A 304 1555 1555 2.46 LINK CA CA A 301 OXT ACT A 304 1555 1555 2.48 LINK CA CA A 301 O HOH A 417 1555 1555 2.40 LINK CA CA A 302 O ACT A 303 1555 1555 2.54 LINK CA CA A 302 OXT ACT A 303 1555 1555 2.40 LINK CA CA A 302 O HOH A 458 1555 1555 2.39 LINK CA CA A 302 O HOH A 576 1555 1555 2.33 CRYST1 114.265 114.265 96.069 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008752 0.005053 0.000000 0.00000 SCALE2 0.000000 0.010105 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010409 0.00000