HEADER TRANSCRIPTION 11-APR-22 7ZJQ TITLE HUMAN TEAD3 IN COMPLEX WITH 1-CYCLOPENTYL-1H-PYRAZOLO[3,4-B]PYRIDINE- TITLE 2 5-CARBOXYLIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL ENHANCER FACTOR TEF-5; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DTEF-1,TEA DOMAIN FAMILY MEMBER 3,TEAD-3; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: TRANSCRIPTIONAL ENHANCER FACTOR TEF-5; COMPND 8 CHAIN: B, C, D; COMPND 9 SYNONYM: DTEF-1,TEA DOMAIN FAMILY MEMBER 3,TEAD-3; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TEAD3, TEAD5, TEF5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: TEAD3, TEAD5, TEF5; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS IMMUNOGLOBULIN-LIKE FOLD, ACTIVATOR, DISEASE MUTATION, DNA-BINDING, KEYWDS 2 NUCLEUS, PHOSPHOPROTEIN, TRANSCRIPTION, TRANSCRIPTION REGULATION, KEYWDS 3 TRANSCRIPTION-PROTEIN BINDING COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.MUSIL,C.M.SOUSA REVDAT 3 31-JAN-24 7ZJQ 1 REMARK REVDAT 2 27-JUL-22 7ZJQ 1 JRNL REVDAT 1 13-JUL-22 7ZJQ 0 JRNL AUTH T.HEINRICH,C.PETERSON,R.SCHNEIDER,S.GARG,D.SCHWARZ,J.GUNERA, JRNL AUTH 2 A.SESHIRE,L.KOTZNER,S.SCHLESIGER,D.MUSIL,H.SCHILKE, JRNL AUTH 3 B.DOERFEL,P.DIEHL,P.BOPPLE,A.R.LEMOS,P.M.F.SOUSA,F.FREIRE, JRNL AUTH 4 T.M.BANDEIRAS,E.CARSWELL,N.PEARSON,S.SIROHI,M.HOOKER, JRNL AUTH 5 E.TRIVIER,R.BROOME,A.BALSIGER,A.CROWDEN,C.DILLON,D.WIENKE JRNL TITL OPTIMIZATION OF TEAD P-SITE BINDING FRAGMENT HIT INTO IN JRNL TITL 2 VIVO ACTIVE LEAD MSC-4106 . JRNL REF J.MED.CHEM. V. 65 9206 2022 JRNL REFN ISSN 0022-2623 JRNL PMID 35763499 JRNL DOI 10.1021/ACS.JMEDCHEM.2C00403 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.8 (3-FEB-2022) REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.77 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 71971 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.258 REMARK 3 R VALUE (WORKING SET) : 0.257 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3597 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 51 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.12 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 72.00 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 1440 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.5467 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1369 REMARK 3 BIN R VALUE (WORKING SET) : 0.5481 REMARK 3 BIN FREE R VALUE : 0.5201 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.93 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 71 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6770 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 68 REMARK 3 SOLVENT ATOMS : 84 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 92.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 26.61890 REMARK 3 B22 (A**2) : -26.47950 REMARK 3 B33 (A**2) : -0.13940 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.890 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.220 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.185 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.226 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.190 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.923 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.917 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 7084 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 9575 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2459 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 1185 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 7084 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 881 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4600 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.96 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.05 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.10 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -10.9298 -1.0890 10.9303 REMARK 3 T TENSOR REMARK 3 T11: -0.0854 T22: -0.0024 REMARK 3 T33: -0.0489 T12: 0.0280 REMARK 3 T13: 0.0532 T23: -0.1520 REMARK 3 L TENSOR REMARK 3 L11: 0.8518 L22: 1.5460 REMARK 3 L33: 2.4738 L12: 0.3594 REMARK 3 L13: 0.5961 L23: -1.2708 REMARK 3 S TENSOR REMARK 3 S11: -0.0173 S12: -0.0400 S13: -0.0357 REMARK 3 S21: 0.0077 S22: -0.0933 S23: 0.0347 REMARK 3 S31: 0.0750 S32: -0.0696 S33: 0.1105 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): -1.0435 4.1909 -23.2220 REMARK 3 T TENSOR REMARK 3 T11: -0.2159 T22: 0.0901 REMARK 3 T33: -0.0803 T12: 0.0011 REMARK 3 T13: 0.0374 T23: -0.0396 REMARK 3 L TENSOR REMARK 3 L11: 2.1020 L22: 0.0169 REMARK 3 L33: 2.9261 L12: -1.1424 REMARK 3 L13: -1.1893 L23: 0.1126 REMARK 3 S TENSOR REMARK 3 S11: 0.0108 S12: 0.0921 S13: 0.0643 REMARK 3 S21: 0.0665 S22: -0.0740 S23: -0.2149 REMARK 3 S31: 0.1353 S32: -0.0607 S33: 0.0632 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): -26.6677 15.1415 -29.4240 REMARK 3 T TENSOR REMARK 3 T11: -0.1309 T22: 0.0632 REMARK 3 T33: -0.0442 T12: -0.0159 REMARK 3 T13: -0.0551 T23: -0.1520 REMARK 3 L TENSOR REMARK 3 L11: 2.4099 L22: 0.5745 REMARK 3 L33: 0.5927 L12: -0.7137 REMARK 3 L13: -0.4199 L23: -0.7158 REMARK 3 S TENSOR REMARK 3 S11: -0.0138 S12: -0.1143 S13: 0.0130 REMARK 3 S21: -0.2358 S22: 0.0322 S23: 0.2344 REMARK 3 S31: -0.0252 S32: -0.0037 S33: -0.0185 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { D|* } REMARK 3 ORIGIN FOR THE GROUP (A): 14.8449 6.8416 20.0374 REMARK 3 T TENSOR REMARK 3 T11: -0.0365 T22: -0.1177 REMARK 3 T33: 0.0269 T12: 0.1093 REMARK 3 T13: -0.0520 T23: 0.1422 REMARK 3 L TENSOR REMARK 3 L11: 5.8882 L22: 0.0000 REMARK 3 L33: 1.1127 L12: 0.8606 REMARK 3 L13: -0.9278 L23: 2.8126 REMARK 3 S TENSOR REMARK 3 S11: 0.0046 S12: 0.0785 S13: -0.0139 REMARK 3 S21: 0.2508 S22: 0.0647 S23: -0.0226 REMARK 3 S31: 0.2266 S32: 0.1087 S33: -0.0693 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ZJQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-APR-22. REMARK 100 THE DEPOSITION ID IS D_1292122384. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99980 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 72638 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.095 REMARK 200 RESOLUTION RANGE LOW (A) : 47.771 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5EMW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM SODIUM ACETATE, 100 MM CALCIUM REMARK 280 ACETATE,, 10% PEG 4000, PH 4.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.73500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.16500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 60.83000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 77.16500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.73500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 60.83000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 216 REMARK 465 ASP A 217 REMARK 465 ARG A 218 REMARK 465 THR A 254 REMARK 465 ASN A 255 REMARK 465 PRO A 256 REMARK 465 ALA A 257 REMARK 465 PHE A 258 REMARK 465 SER A 259 REMARK 465 ASP A 435 REMARK 465 GLN B 216 REMARK 465 ASP B 217 REMARK 465 ARG B 218 REMARK 465 GLN B 253 REMARK 465 THR B 254 REMARK 465 ASN B 255 REMARK 465 PRO B 256 REMARK 465 ALA B 257 REMARK 465 PHE B 258 REMARK 465 SER B 259 REMARK 465 ASP B 435 REMARK 465 GLN C 216 REMARK 465 ASP C 217 REMARK 465 ARG C 218 REMARK 465 THR C 254 REMARK 465 ASN C 255 REMARK 465 PRO C 256 REMARK 465 ALA C 257 REMARK 465 PHE C 258 REMARK 465 SER C 259 REMARK 465 ASP C 260 REMARK 465 PRO C 261 REMARK 465 ASP C 435 REMARK 465 GLN D 216 REMARK 465 ASP D 217 REMARK 465 ARG D 218 REMARK 465 THR D 254 REMARK 465 ASN D 255 REMARK 465 PRO D 256 REMARK 465 ALA D 257 REMARK 465 PHE D 258 REMARK 465 SER D 259 REMARK 465 ASP D 260 REMARK 465 PRO D 261 REMARK 465 ASP D 435 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG A 238 CD NE CZ NH1 NH2 REMARK 480 LYS A 274 CE NZ REMARK 480 LYS A 278 CG CD CE NZ REMARK 480 LYS A 279 CG CD CE NZ REMARK 480 LYS A 298 NZ REMARK 480 GLN A 308 CG CD OE1 NE2 REMARK 480 GLU A 422 CG CD OE1 OE2 REMARK 480 LYS A 434 CE NZ REMARK 480 ARG B 238 CD NE CZ NH1 NH2 REMARK 480 LYS B 274 CE NZ REMARK 480 LYS B 278 CG CD CE NZ REMARK 480 LYS B 279 CG CD CE NZ REMARK 480 LYS B 298 NZ REMARK 480 GLN B 308 CG CD OE1 NE2 REMARK 480 LYS B 340 CE NZ REMARK 480 LYS C 278 CG CD CE NZ REMARK 480 LYS C 279 CG CD CE NZ REMARK 480 GLN C 308 CG CD OE1 NE2 REMARK 480 GLU C 422 CG CD OE1 OE2 REMARK 480 LYS C 434 CE NZ REMARK 480 ARG D 238 CD NE CZ NH1 NH2 REMARK 480 LYS D 278 CG CD CE NZ REMARK 480 LYS D 279 CG CD CE NZ REMARK 480 LYS D 298 NZ REMARK 480 GLN D 308 CG CD OE1 NE2 REMARK 480 GLU D 392 CB CG CD OE1 OE2 REMARK 480 LYS D 434 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 278 -87.60 -53.25 REMARK 500 LYS B 278 -126.93 -64.65 REMARK 500 GLN C 237 78.72 -100.16 REMARK 500 LYS C 278 -127.82 -119.86 REMARK 500 GLU D 277 -157.79 -114.44 REMARK 500 LYS D 278 -137.39 60.75 REMARK 500 SER D 337 117.49 -161.85 REMARK 500 REMARK 500 REMARK: NULL DBREF 7ZJQ A 216 435 UNP Q99594 TEAD3_HUMAN 216 435 DBREF 7ZJQ B 216 435 UNP Q99594 TEAD3_HUMAN 216 435 DBREF 7ZJQ C 216 435 UNP Q99594 TEAD3_HUMAN 216 435 DBREF 7ZJQ D 216 435 UNP Q99594 TEAD3_HUMAN 216 435 SEQRES 1 A 220 GLN ASP ARG THR ILE ALA SER SER ARG LEU ARG LEU LEU SEQRES 2 A 220 GLU TYR SER ALA PHE MET GLU VAL GLN ARG ASP PRO ASP SEQRES 3 A 220 THR TYR SER LYS HIS LEU PHE VAL HIS ILE GLY GLN THR SEQRES 4 A 220 ASN PRO ALA PHE SER ASP PRO PRO LEU GLU ALA VAL ASP SEQRES 5 A 220 VAL ARG GLN ILE TYR ASP LYS PHE PRO GLU LYS LYS GLY SEQRES 6 A 220 GLY LEU LYS GLU LEU TYR GLU LYS GLY PRO PRO ASN ALA SEQRES 7 A 220 PHE PHE LEU VAL LYS PHE TRP ALA ASP LEU ASN SER THR SEQRES 8 A 220 ILE GLN GLU GLY PRO GLY ALA PHE TYR GLY VAL SER SER SEQRES 9 A 220 GLN TYR SER SER ALA ASP SER MET THR ILE SER VAL SER SEQRES 10 A 220 THR LYS VAL CSX SER PHE GLY LYS GLN VAL VAL GLU LYS SEQRES 11 A 220 VAL GLU THR GLU TYR ALA ARG LEU GLU ASN GLY ARG PHE SEQRES 12 A 220 VAL TYR ARG ILE HIS ARG SER PRO MET CYS GLU TYR MET SEQRES 13 A 220 ILE ASN PHE ILE HIS LYS LEU LYS HIS LEU PRO GLU LYS SEQRES 14 A 220 TYR MET MET ASN SER VAL LEU GLU ASN PHE THR ILE LEU SEQRES 15 A 220 GLN VAL VAL THR SER ARG ASP SER GLN GLU THR LEU LEU SEQRES 16 A 220 VAL ILE ALA PHE VAL PHE GLU VAL SER THR SER GLU HIS SEQRES 17 A 220 GLY ALA GLN HIS HIS VAL TYR LYS LEU VAL LYS ASP SEQRES 1 B 220 GLN ASP ARG THR ILE ALA SER SER ARG LEU ARG LEU LEU SEQRES 2 B 220 GLU TYR SER ALA PHE MET GLU VAL GLN ARG ASP PRO ASP SEQRES 3 B 220 THR TYR SER LYS HIS LEU PHE VAL HIS ILE GLY GLN THR SEQRES 4 B 220 ASN PRO ALA PHE SER ASP PRO PRO LEU GLU ALA VAL ASP SEQRES 5 B 220 VAL ARG GLN ILE TYR ASP LYS PHE PRO GLU LYS LYS GLY SEQRES 6 B 220 GLY LEU LYS GLU LEU TYR GLU LYS GLY PRO PRO ASN ALA SEQRES 7 B 220 PHE PHE LEU VAL LYS PHE TRP ALA ASP LEU ASN SER THR SEQRES 8 B 220 ILE GLN GLU GLY PRO GLY ALA PHE TYR GLY VAL SER SER SEQRES 9 B 220 GLN TYR SER SER ALA ASP SER MET THR ILE SER VAL SER SEQRES 10 B 220 THR LYS VAL CYS SER PHE GLY LYS GLN VAL VAL GLU LYS SEQRES 11 B 220 VAL GLU THR GLU TYR ALA ARG LEU GLU ASN GLY ARG PHE SEQRES 12 B 220 VAL TYR ARG ILE HIS ARG SER PRO MET CYS GLU TYR MET SEQRES 13 B 220 ILE ASN PHE ILE HIS LYS LEU LYS HIS LEU PRO GLU LYS SEQRES 14 B 220 TYR MET MET ASN SER VAL LEU GLU ASN PHE THR ILE LEU SEQRES 15 B 220 GLN VAL VAL THR SER ARG ASP SER GLN GLU THR LEU LEU SEQRES 16 B 220 VAL ILE ALA PHE VAL PHE GLU VAL SER THR SER GLU HIS SEQRES 17 B 220 GLY ALA GLN HIS HIS VAL TYR LYS LEU VAL LYS ASP SEQRES 1 C 220 GLN ASP ARG THR ILE ALA SER SER ARG LEU ARG LEU LEU SEQRES 2 C 220 GLU TYR SER ALA PHE MET GLU VAL GLN ARG ASP PRO ASP SEQRES 3 C 220 THR TYR SER LYS HIS LEU PHE VAL HIS ILE GLY GLN THR SEQRES 4 C 220 ASN PRO ALA PHE SER ASP PRO PRO LEU GLU ALA VAL ASP SEQRES 5 C 220 VAL ARG GLN ILE TYR ASP LYS PHE PRO GLU LYS LYS GLY SEQRES 6 C 220 GLY LEU LYS GLU LEU TYR GLU LYS GLY PRO PRO ASN ALA SEQRES 7 C 220 PHE PHE LEU VAL LYS PHE TRP ALA ASP LEU ASN SER THR SEQRES 8 C 220 ILE GLN GLU GLY PRO GLY ALA PHE TYR GLY VAL SER SER SEQRES 9 C 220 GLN TYR SER SER ALA ASP SER MET THR ILE SER VAL SER SEQRES 10 C 220 THR LYS VAL CYS SER PHE GLY LYS GLN VAL VAL GLU LYS SEQRES 11 C 220 VAL GLU THR GLU TYR ALA ARG LEU GLU ASN GLY ARG PHE SEQRES 12 C 220 VAL TYR ARG ILE HIS ARG SER PRO MET CYS GLU TYR MET SEQRES 13 C 220 ILE ASN PHE ILE HIS LYS LEU LYS HIS LEU PRO GLU LYS SEQRES 14 C 220 TYR MET MET ASN SER VAL LEU GLU ASN PHE THR ILE LEU SEQRES 15 C 220 GLN VAL VAL THR SER ARG ASP SER GLN GLU THR LEU LEU SEQRES 16 C 220 VAL ILE ALA PHE VAL PHE GLU VAL SER THR SER GLU HIS SEQRES 17 C 220 GLY ALA GLN HIS HIS VAL TYR LYS LEU VAL LYS ASP SEQRES 1 D 220 GLN ASP ARG THR ILE ALA SER SER ARG LEU ARG LEU LEU SEQRES 2 D 220 GLU TYR SER ALA PHE MET GLU VAL GLN ARG ASP PRO ASP SEQRES 3 D 220 THR TYR SER LYS HIS LEU PHE VAL HIS ILE GLY GLN THR SEQRES 4 D 220 ASN PRO ALA PHE SER ASP PRO PRO LEU GLU ALA VAL ASP SEQRES 5 D 220 VAL ARG GLN ILE TYR ASP LYS PHE PRO GLU LYS LYS GLY SEQRES 6 D 220 GLY LEU LYS GLU LEU TYR GLU LYS GLY PRO PRO ASN ALA SEQRES 7 D 220 PHE PHE LEU VAL LYS PHE TRP ALA ASP LEU ASN SER THR SEQRES 8 D 220 ILE GLN GLU GLY PRO GLY ALA PHE TYR GLY VAL SER SER SEQRES 9 D 220 GLN TYR SER SER ALA ASP SER MET THR ILE SER VAL SER SEQRES 10 D 220 THR LYS VAL CYS SER PHE GLY LYS GLN VAL VAL GLU LYS SEQRES 11 D 220 VAL GLU THR GLU TYR ALA ARG LEU GLU ASN GLY ARG PHE SEQRES 12 D 220 VAL TYR ARG ILE HIS ARG SER PRO MET CYS GLU TYR MET SEQRES 13 D 220 ILE ASN PHE ILE HIS LYS LEU LYS HIS LEU PRO GLU LYS SEQRES 14 D 220 TYR MET MET ASN SER VAL LEU GLU ASN PHE THR ILE LEU SEQRES 15 D 220 GLN VAL VAL THR SER ARG ASP SER GLN GLU THR LEU LEU SEQRES 16 D 220 VAL ILE ALA PHE VAL PHE GLU VAL SER THR SER GLU HIS SEQRES 17 D 220 GLY ALA GLN HIS HIS VAL TYR LYS LEU VAL LYS ASP MODRES 7ZJQ CSX A 336 CYS MODIFIED RESIDUE HET CSX A 336 7 HET JIK A 501 17 HET JIK B 501 17 HET JIK C 501 17 HET JIK D 501 17 HETNAM CSX S-OXY CYSTEINE HETNAM JIK 1-CYCLOPENTYLPYRAZOLO[3,4-B]PYRIDINE-5-CARBOXYLIC ACID FORMUL 1 CSX C3 H7 N O3 S FORMUL 5 JIK 4(C12 H13 N3 O2) FORMUL 9 HOH *84(H2 O) HELIX 1 AA1 ARG A 269 ILE A 271 5 3 HELIX 2 AA2 GLY A 281 GLY A 289 1 9 HELIX 3 AA3 PRO A 290 ASN A 292 5 3 HELIX 4 AA4 CYS A 368 HIS A 380 1 13 HELIX 5 AA5 GLU A 383 GLU A 392 1 10 HELIX 6 AA6 ARG B 269 PHE B 275 5 7 HELIX 7 AA7 GLY B 281 GLY B 289 1 9 HELIX 8 AA8 PRO B 290 ASN B 292 5 3 HELIX 9 AA9 CYS B 368 HIS B 380 1 13 HELIX 10 AB1 GLU B 383 GLU B 392 1 10 HELIX 11 AB2 ARG C 269 PHE C 275 5 7 HELIX 12 AB3 GLY C 281 GLY C 289 1 9 HELIX 13 AB4 PRO C 290 ASN C 292 5 3 HELIX 14 AB5 CYS C 368 HIS C 380 1 13 HELIX 15 AB6 GLU C 383 GLU C 392 1 10 HELIX 16 AB7 ARG D 269 PHE D 275 5 7 HELIX 17 AB8 GLY D 281 GLY D 289 1 9 HELIX 18 AB9 PRO D 290 ASN D 292 5 3 HELIX 19 AC1 CYS D 368 HIS D 380 1 13 HELIX 20 AC2 GLU D 383 GLU D 392 1 10 SHEET 1 AA110 ARG A 352 GLU A 354 0 SHEET 2 AA110 ARG A 357 PRO A 366 -1 O ARG A 357 N GLU A 354 SHEET 3 AA110 PHE A 314 SER A 323 -1 N SER A 323 O PHE A 358 SHEET 4 AA110 ARG A 226 ASP A 239 -1 N ARG A 226 O SER A 322 SHEET 5 AA110 THR A 242 ILE A 251 -1 O HIS A 246 N MET A 234 SHEET 6 AA110 THR B 242 ILE B 251 -1 O LYS B 245 N TYR A 243 SHEET 7 AA110 ARG B 226 ASP B 239 -1 N MET B 234 O HIS B 246 SHEET 8 AA110 PHE B 314 SER B 323 -1 O PHE B 314 N GLU B 235 SHEET 9 AA110 ARG B 357 PRO B 366 -1 O PHE B 358 N SER B 323 SHEET 10 AA110 ARG B 352 GLU B 354 -1 N GLU B 354 O ARG B 357 SHEET 1 AA214 GLU A 264 ASP A 267 0 SHEET 2 AA214 GLN A 426 VAL A 433 1 O LYS A 431 N VAL A 266 SHEET 3 AA214 PHE A 294 ALA A 301 -1 N TRP A 300 O GLN A 426 SHEET 4 AA214 THR A 408 VAL A 418 1 O ALA A 413 N VAL A 297 SHEET 5 AA214 PHE A 394 SER A 402 -1 N VAL A 400 O LEU A 410 SHEET 6 AA214 ILE A 329 SER A 337 -1 N CSX A 336 O THR A 395 SHEET 7 AA214 LYS A 340 GLU A 349 -1 O GLU A 347 N VAL A 331 SHEET 8 AA214 LYS D 340 TYR D 350 1 O VAL D 346 N GLU A 344 SHEET 9 AA214 THR D 328 SER D 337 -1 N VAL D 335 O VAL D 342 SHEET 10 AA214 PHE D 394 SER D 402 -1 O THR D 395 N CYS D 336 SHEET 11 AA214 THR D 408 VAL D 418 -1 O PHE D 414 N ILE D 396 SHEET 12 AA214 PHE D 294 ALA D 301 1 N VAL D 297 O ALA D 413 SHEET 13 AA214 GLN D 426 VAL D 433 -1 O GLN D 426 N TRP D 300 SHEET 14 AA214 GLU D 264 ASP D 267 1 N VAL D 266 O LYS D 431 SHEET 1 AA314 ALA B 265 ASP B 267 0 SHEET 2 AA314 GLN B 426 VAL B 433 1 O LYS B 431 N VAL B 266 SHEET 3 AA314 PHE B 294 ALA B 301 -1 N TRP B 300 O GLN B 426 SHEET 4 AA314 THR B 408 VAL B 418 1 O ALA B 413 N VAL B 297 SHEET 5 AA314 PHE B 394 SER B 402 -1 N VAL B 400 O LEU B 410 SHEET 6 AA314 THR B 328 SER B 337 -1 N LYS B 334 O LEU B 397 SHEET 7 AA314 LYS B 340 TYR B 350 -1 O VAL B 342 N VAL B 335 SHEET 8 AA314 LYS C 340 TYR C 350 1 O VAL C 346 N GLU B 344 SHEET 9 AA314 THR C 328 SER C 337 -1 N VAL C 331 O GLU C 347 SHEET 10 AA314 PHE C 394 SER C 402 -1 O THR C 395 N CYS C 336 SHEET 11 AA314 THR C 408 VAL C 418 -1 O LEU C 410 N VAL C 400 SHEET 12 AA314 PHE C 294 ALA C 301 1 N VAL C 297 O ALA C 413 SHEET 13 AA314 GLN C 426 VAL C 433 -1 O GLN C 426 N TRP C 300 SHEET 14 AA314 GLU C 264 ASP C 267 1 N VAL C 266 O LYS C 431 SHEET 1 AA4 5 THR C 242 ILE C 251 0 SHEET 2 AA4 5 ARG C 226 ASP C 239 -1 N MET C 234 O HIS C 246 SHEET 3 AA4 5 ALA C 313 SER C 323 -1 O PHE C 314 N GLU C 235 SHEET 4 AA4 5 ARG C 357 PRO C 366 -1 O ILE C 362 N SER C 319 SHEET 5 AA4 5 ARG C 352 GLU C 354 -1 N GLU C 354 O ARG C 357 SHEET 1 AA5 5 THR D 242 ILE D 251 0 SHEET 2 AA5 5 ARG D 226 ASP D 239 -1 N MET D 234 O HIS D 246 SHEET 3 AA5 5 ALA D 313 SER D 323 -1 O PHE D 314 N GLU D 235 SHEET 4 AA5 5 ARG D 357 PRO D 366 -1 O ILE D 362 N SER D 319 SHEET 5 AA5 5 ARG D 352 GLU D 354 -1 N GLU D 354 O ARG D 357 LINK C VAL A 335 N CSX A 336 1555 1555 1.35 LINK C CSX A 336 N SER A 337 1555 1555 1.33 CISPEP 1 GLY A 289 PRO A 290 0 -0.72 CISPEP 2 GLY B 289 PRO B 290 0 -0.29 CISPEP 3 GLY C 289 PRO C 290 0 0.06 CISPEP 4 GLY D 289 PRO D 290 0 -0.04 CRYST1 65.470 121.660 154.330 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015274 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008220 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006480 0.00000