HEADER NUCLEAR PROTEIN 20-APR-22 7ZMX TITLE CRYSTAL STRUCTURE OF THE PLANT HOMEODOMAIN (PHD) OF HUMAN ING3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: INHIBITOR OF GROWTH PROTEIN 3; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: P47ING3; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: N-TERMINAL RESIDUES GAMG ARE NON-NATIVE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ING3, HSPC301; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PET KEYWDS ING3, PHD, HISTONE BINDING, HUMAN, NUCLEAR, NUCLEAR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.O.FERRERAS,F.J.MEDRANO,F.J.BLANCO REVDAT 4 07-FEB-24 7ZMX 1 REMARK REVDAT 3 24-MAY-23 7ZMX 1 JRNL REVDAT 2 17-MAY-23 7ZMX 1 JRNL REVDAT 1 10-MAY-23 7ZMX 0 JRNL AUTH M.FERRERAS-GUTIERREZ,B.CHAVES-ARQUERO,A.GONZALEZ-MAGANA, JRNL AUTH 2 N.MERINO,I.AMUSATEGUI-MATEU,S.HUECAS,F.J.MEDRANO,F.J.BLANCO JRNL TITL STRUCTURAL ANALYSIS OF ING3 PROTEIN AND HISTONE H3 BINDING. JRNL REF INT.J.BIOL.MACROMOL. V. 242 24724 2023 JRNL REFN ISSN 0141-8130 JRNL PMID 37148949 JRNL DOI 10.1016/J.IJBIOMAC.2023.124724 REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 82.1 REMARK 3 NUMBER OF REFLECTIONS : 47743 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.080 REMARK 3 FREE R VALUE TEST SET COUNT : 3381 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.2400 - 3.4600 1.00 2259 179 0.1565 0.2198 REMARK 3 2 3.4600 - 2.7500 1.00 2229 184 0.1594 0.1805 REMARK 3 3 2.7500 - 2.4000 1.00 2237 155 0.1739 0.1747 REMARK 3 4 2.4000 - 2.1800 1.00 2308 162 0.1662 0.2042 REMARK 3 5 2.1800 - 2.0300 1.00 2228 166 0.1567 0.1981 REMARK 3 6 2.0300 - 1.9100 1.00 2252 172 0.1646 0.1591 REMARK 3 7 1.9100 - 1.8100 1.00 2250 182 0.1760 0.1968 REMARK 3 8 1.8100 - 1.7300 1.00 2254 170 0.1504 0.1911 REMARK 3 9 1.7300 - 1.6700 1.00 2263 157 0.1578 0.1700 REMARK 3 10 1.6700 - 1.6100 1.00 2242 178 0.1604 0.1738 REMARK 3 11 1.6100 - 1.5600 1.00 2237 174 0.1658 0.2584 REMARK 3 12 1.5600 - 1.5100 1.00 2262 170 0.1932 0.2617 REMARK 3 13 1.5100 - 1.4700 1.00 2262 172 0.1993 0.2261 REMARK 3 14 1.4700 - 1.4400 1.00 2236 166 0.2157 0.2163 REMARK 3 15 1.4400 - 1.4100 1.00 2230 167 0.2274 0.2926 REMARK 3 16 1.4000 - 1.3800 1.00 2255 168 0.2492 0.2691 REMARK 3 17 1.3700 - 1.3500 0.98 2228 166 0.2854 0.3169 REMARK 3 18 1.3500 - 1.3200 0.88 1996 147 0.3016 0.3066 REMARK 3 19 1.3200 - 1.3000 0.75 1704 145 0.3104 0.3251 REMARK 3 20 1.3000 - 1.2800 0.53 1140 94 0.3579 0.3207 REMARK 3 21 1.2800 - 1.2600 0.30 689 61 0.3769 0.4168 REMARK 3 22 1.2600 - 1.2400 0.18 398 30 0.4038 0.4337 REMARK 3 23 1.2400 - 1.2200 0.07 157 9 0.4608 0.3296 REMARK 3 24 1.2200 - 1.2000 0.02 46 7 0.4404 0.8023 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.155 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.28 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 854 REMARK 3 ANGLE : 0.999 1158 REMARK 3 CHIRALITY : 0.079 112 REMARK 3 PLANARITY : 0.009 151 REMARK 3 DIHEDRAL : 9.579 113 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ZMX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-APR-22. REMARK 100 THE DEPOSITION ID IS D_1292122493. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-APR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47743 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 35.240 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.4 REMARK 200 DATA REDUNDANCY : 14.80 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.5900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 45.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.61300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.180 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2VNF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION: ING3 PHD AT 20 MG/ML REMARK 280 IN TRIS 20 MM PH = 6.5, 150 MM NACL, 1 MM DTT. RESERVOIR REMARK 280 SOLUTION: 0.1 M TRIS PH = 8.4, 30% PEG 4000, 0.2 M CALCIUM REMARK 280 CHLORIDE MIXTURE OF 1 UL OF PROTEIN SOLUTION WITH 1 UL OF REMARK 280 RESERVOIR SOLUTION., PH 8.4, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.53167 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 67.06333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 67.06333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 33.53167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 628 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 354 REMARK 465 ALA A 355 REMARK 465 MET A 356 REMARK 465 GLY A 357 REMARK 465 ASN A 358 REMARK 465 GLY B 354 REMARK 465 ALA B 355 REMARK 465 MET B 356 REMARK 465 GLY B 357 REMARK 465 ASN B 358 REMARK 465 GLY B 371 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH22 ARG A 361 O HOH A 601 1.45 REMARK 500 NH2 ARG A 361 O HOH A 601 1.77 REMARK 500 O HOH A 603 O HOH A 630 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OH TYR B 370 OH TYR B 370 5554 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 363 174.77 74.81 REMARK 500 GLU A 384 -53.48 78.91 REMARK 500 CYS B 363 167.81 69.96 REMARK 500 GLU B 384 -53.15 83.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 363 SG REMARK 620 2 CYS A 365 SG 114.6 REMARK 620 3 HIS A 387 ND1 102.4 94.9 REMARK 620 4 CYS A 390 SG 111.1 115.8 116.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 502 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 366 OD1 REMARK 620 2 ASN A 366 OD1 0.0 REMARK 620 3 HOH A 628 O 90.3 90.3 REMARK 620 4 HOH A 628 O 90.7 90.7 0.3 REMARK 620 5 HOH A 632 O 77.8 77.8 132.7 132.8 REMARK 620 6 HOH A 632 O 89.9 89.9 159.3 159.2 67.4 REMARK 620 7 HOH A 634 O 81.9 81.9 68.2 68.3 64.9 132.3 REMARK 620 8 HOH A 634 O 94.8 94.8 78.6 78.5 147.1 80.7 146.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 503 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 376 SG REMARK 620 2 CYS A 381 SG 109.4 REMARK 620 3 CYS A 403 SG 114.9 113.9 REMARK 620 4 CYS A 406 SG 107.7 108.2 102.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 504 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 398 O REMARK 620 2 GLU B 384 OE1 32.3 REMARK 620 3 GLU B 384 OE2 31.8 3.3 REMARK 620 4 HOH B 612 O 30.0 2.7 2.5 REMARK 620 5 HOH B 616 O 34.8 3.2 6.0 5.8 REMARK 620 6 HOH B 619 O 32.1 3.9 7.1 5.6 3.4 REMARK 620 7 HOH B 624 O 35.8 3.8 6.2 6.4 1.3 4.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 363 SG REMARK 620 2 CYS B 365 SG 112.6 REMARK 620 3 HIS B 387 ND1 98.0 97.9 REMARK 620 4 CYS B 390 SG 110.6 118.2 117.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 376 SG REMARK 620 2 CYS B 381 SG 106.4 REMARK 620 3 CYS B 403 SG 115.2 113.1 REMARK 620 4 CYS B 406 SG 109.3 112.5 100.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 503 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 377 OD1 REMARK 620 2 ASP B 377 OD2 50.1 REMARK 620 3 HOH B 604 O 88.5 74.6 REMARK 620 4 HOH B 606 O 132.6 83.8 66.4 REMARK 620 5 HOH B 610 O 60.0 105.5 128.2 164.1 REMARK 620 6 HOH B 610 O 88.5 128.4 75.2 119.7 64.8 REMARK 620 7 HOH B 642 O 89.4 91.0 162.8 103.3 64.2 121.8 REMARK 620 8 HOH B 642 O 155.8 153.0 93.8 69.3 100.8 69.0 95.1 REMARK 620 N 1 2 3 4 5 6 7 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 51196 RELATED DB: BMRB REMARK 900 NMR BACKBONE ASSIGNMENT DBREF 7ZMX A 358 411 UNP Q9NXR8 ING3_HUMAN 358 411 DBREF 7ZMX B 358 411 UNP Q9NXR8 ING3_HUMAN 358 411 SEQADV 7ZMX GLY A 354 UNP Q9NXR8 EXPRESSION TAG SEQADV 7ZMX ALA A 355 UNP Q9NXR8 EXPRESSION TAG SEQADV 7ZMX MET A 356 UNP Q9NXR8 EXPRESSION TAG SEQADV 7ZMX GLY A 357 UNP Q9NXR8 EXPRESSION TAG SEQADV 7ZMX GLY B 354 UNP Q9NXR8 EXPRESSION TAG SEQADV 7ZMX ALA B 355 UNP Q9NXR8 EXPRESSION TAG SEQADV 7ZMX MET B 356 UNP Q9NXR8 EXPRESSION TAG SEQADV 7ZMX GLY B 357 UNP Q9NXR8 EXPRESSION TAG SEQRES 1 A 58 GLY ALA MET GLY ASN GLU PRO ARG TYR CYS ILE CYS ASN SEQRES 2 A 58 GLN VAL SER TYR GLY GLU MET VAL GLY CYS ASP ASN GLN SEQRES 3 A 58 ASP CYS PRO ILE GLU TRP PHE HIS TYR GLY CYS VAL GLY SEQRES 4 A 58 LEU THR GLU ALA PRO LYS GLY LYS TRP TYR CYS PRO GLN SEQRES 5 A 58 CYS THR ALA ALA MET LYS SEQRES 1 B 58 GLY ALA MET GLY ASN GLU PRO ARG TYR CYS ILE CYS ASN SEQRES 2 B 58 GLN VAL SER TYR GLY GLU MET VAL GLY CYS ASP ASN GLN SEQRES 3 B 58 ASP CYS PRO ILE GLU TRP PHE HIS TYR GLY CYS VAL GLY SEQRES 4 B 58 LEU THR GLU ALA PRO LYS GLY LYS TRP TYR CYS PRO GLN SEQRES 5 B 58 CYS THR ALA ALA MET LYS HET ZN A 501 1 HET CA A 502 1 HET ZN A 503 1 HET ZN B 501 1 HET ZN B 502 1 HET CA B 503 1 HET CA B 504 1 HETNAM ZN ZINC ION HETNAM CA CALCIUM ION FORMUL 3 ZN 4(ZN 2+) FORMUL 4 CA 3(CA 2+) FORMUL 10 HOH *98(H2 O) HELIX 1 AA1 GLY A 389 GLY A 392 5 4 HELIX 2 AA2 CYS A 403 LYS A 411 1 9 HELIX 3 AA3 GLY B 389 GLY B 392 5 4 HELIX 4 AA4 CYS B 403 LYS B 411 1 9 SHEET 1 AA1 2 ARG A 361 TYR A 362 0 SHEET 2 AA1 2 GLN A 367 VAL A 368 -1 O GLN A 367 N TYR A 362 SHEET 1 AA2 2 MET A 373 GLY A 375 0 SHEET 2 AA2 2 TRP A 385 HIS A 387 -1 O PHE A 386 N VAL A 374 SHEET 1 AA3 2 ARG B 361 TYR B 362 0 SHEET 2 AA3 2 GLN B 367 VAL B 368 -1 O GLN B 367 N TYR B 362 SHEET 1 AA4 2 MET B 373 GLY B 375 0 SHEET 2 AA4 2 TRP B 385 HIS B 387 -1 O PHE B 386 N VAL B 374 LINK SG CYS A 363 ZN ZN A 501 1555 1555 2.30 LINK SG CYS A 365 ZN ZN A 501 1555 1555 2.32 LINK OD1 ASN A 366 CA CA A 502 1555 1555 2.39 LINK OD1 ASN A 366 CA CA A 502 1555 5554 2.18 LINK SG CYS A 376 ZN ZN A 503 1555 1555 2.35 LINK SG CYS A 381 ZN ZN A 503 1555 1555 2.32 LINK ND1 HIS A 387 ZN ZN A 501 1555 1555 2.12 LINK SG CYS A 390 ZN ZN A 501 1555 1555 2.30 LINK O LYS A 398 CA CA B 504 1555 1545 2.40 LINK SG CYS A 403 ZN ZN A 503 1555 1555 2.31 LINK SG CYS A 406 ZN ZN A 503 1555 1555 2.34 LINK CA CA A 502 O HOH A 628 1555 1555 2.46 LINK CA CA A 502 O HOH A 628 1555 5554 2.46 LINK CA CA A 502 O HOH A 632 1555 1555 2.80 LINK CA CA A 502 O HOH A 632 1555 5554 2.44 LINK CA CA A 502 O HOH A 634 1555 1555 2.68 LINK CA CA A 502 O HOH A 634 1555 5554 2.08 LINK SG CYS B 363 ZN ZN B 501 1555 1555 2.32 LINK SG CYS B 365 ZN ZN B 501 1555 1555 2.33 LINK SG CYS B 376 ZN ZN B 502 1555 1555 2.36 LINK OD1 ASP B 377 CA CA B 503 1555 1555 2.50 LINK OD2 ASP B 377 CA CA B 503 1555 1555 2.65 LINK SG CYS B 381 ZN ZN B 502 1555 1555 2.35 LINK OE1 GLU B 384 CA CA B 504 1555 1555 2.49 LINK OE2 GLU B 384 CA CA B 504 1555 4555 2.35 LINK ND1 HIS B 387 ZN ZN B 501 1555 1555 2.05 LINK SG CYS B 390 ZN ZN B 501 1555 1555 2.29 LINK SG CYS B 403 ZN ZN B 502 1555 1555 2.34 LINK SG CYS B 406 ZN ZN B 502 1555 1555 2.31 LINK CA CA B 503 O HOH B 604 1555 1555 2.35 LINK CA CA B 503 O HOH B 606 1555 1555 2.60 LINK CA CA B 503 O HOH B 610 1555 1555 2.89 LINK CA CA B 503 O HOH B 610 1555 4555 2.47 LINK CA CA B 503 O HOH B 642 1555 1555 2.21 LINK CA CA B 503 O HOH B 642 1555 4555 2.42 LINK CA CA B 504 O HOH B 612 1555 1555 2.46 LINK CA CA B 504 O HOH B 616 1555 4555 2.46 LINK CA CA B 504 O HOH B 619 1555 4555 2.41 LINK CA CA B 504 O HOH B 624 1555 1555 2.42 CRYST1 40.695 40.695 100.595 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024573 0.014187 0.000000 0.00000 SCALE2 0.000000 0.028375 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009941 0.00000