HEADER VIRAL PROTEIN 21-APR-22 7ZNO TITLE CRYSTAL STRUCTURE OF UNLINKED NS2B_NS3 PROTEASE FROM ZIKA VIRUS IN TITLE 2 COMPLEX WITH BORONATE INHIBITOR MI-2270 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE PROTEASE SUBUNIT NS2B; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FLAVIVIRIN PROTEASE NS2B REGULATORY SUBUNIT,NON-STRUCTURAL COMPND 5 PROTEIN 2B; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: SERINE PROTEASE NS3; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: FLAVIVIRIN PROTEASE NS3 CATALYTIC SUBUNIT,NON-STRUCTURAL COMPND 11 PROTEIN 3; COMPND 12 EC: 3.4.21.91,3.6.1.15,3.6.4.13; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZIKA VIRUS; SOURCE 3 ORGANISM_TAXID: 64320; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: BZIPRO; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: ZIKA VIRUS; SOURCE 9 ORGANISM_TAXID: 64320; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 11 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: BZIPRO KEYWDS FLAVIVIRIN, SERINE PROTEASE, VIRAL PROTEIN, NS2B-NS3, ZIKA VIRUS, KEYWDS 2 BORONIC ACID, BORONATE EXPDTA X-RAY DIFFRACTION AUTHOR S.HUBER,A.HEINE,T.STEINMETZER REVDAT 4 07-FEB-24 7ZNO 1 REMARK REVDAT 3 15-FEB-23 7ZNO 1 JRNL REVDAT 2 28-DEC-22 7ZNO 1 JRNL REVDAT 1 22-JUN-22 7ZNO 0 JRNL AUTH N.J.BRAUN,S.HUBER,L.C.SCHMACKE,A.HEINE,T.STEINMETZER JRNL TITL BOROLEUCINE-DERIVED COVALENT INHIBITORS OF THE ZIKV JRNL TITL 2 PROTEASE. JRNL REF CHEMMEDCHEM V. 18 00336 2023 JRNL REFN ESSN 1860-7187 JRNL PMID 36325810 JRNL DOI 10.1002/CMDC.202200336 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20_4459 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 22768 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1140 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.5100 - 3.4000 1.00 2965 156 0.1655 0.1890 REMARK 3 2 3.4000 - 2.7000 1.00 2762 145 0.2031 0.2153 REMARK 3 3 2.7000 - 2.3600 1.00 2691 142 0.2204 0.2971 REMARK 3 4 2.3600 - 2.1400 1.00 2684 141 0.2005 0.2613 REMARK 3 5 2.1400 - 1.9900 1.00 2676 141 0.2206 0.2813 REMARK 3 6 1.9900 - 1.8700 0.99 2627 140 0.2125 0.2826 REMARK 3 7 1.8700 - 1.7800 0.99 2622 137 0.2198 0.2590 REMARK 3 8 1.7800 - 1.7000 0.99 2601 138 0.2691 0.2901 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.201 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.964 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.46 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1466 REMARK 3 ANGLE : 1.009 1995 REMARK 3 CHIRALITY : 0.059 224 REMARK 3 PLANARITY : 0.009 265 REMARK 3 DIHEDRAL : 12.257 515 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 50 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.3702 15.1097 -13.0804 REMARK 3 T TENSOR REMARK 3 T11: 0.5509 T22: 0.3003 REMARK 3 T33: 0.4863 T12: 0.0871 REMARK 3 T13: -0.0301 T23: 0.0201 REMARK 3 L TENSOR REMARK 3 L11: 0.0861 L22: 0.2596 REMARK 3 L33: 0.0590 L12: -0.0156 REMARK 3 L13: -0.0636 L23: 0.0153 REMARK 3 S TENSOR REMARK 3 S11: -0.0717 S12: -0.0300 S13: 0.6473 REMARK 3 S21: -0.2860 S22: -0.2339 S23: -0.1292 REMARK 3 S31: -0.3040 S32: -0.5293 S33: 0.0003 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 55 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.4634 4.6657 -23.8718 REMARK 3 T TENSOR REMARK 3 T11: 0.4876 T22: 0.4696 REMARK 3 T33: 0.3757 T12: 0.1922 REMARK 3 T13: -0.0729 T23: 0.0038 REMARK 3 L TENSOR REMARK 3 L11: 0.0997 L22: 0.0646 REMARK 3 L33: 0.0286 L12: -0.0386 REMARK 3 L13: -0.0259 L23: 0.0407 REMARK 3 S TENSOR REMARK 3 S11: 0.1885 S12: -0.0491 S13: 0.2046 REMARK 3 S21: 0.2049 S22: -0.0201 S23: 0.1985 REMARK 3 S31: -0.0396 S32: -0.4486 S33: -0.0008 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 60 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.7331 -4.0458 -32.5846 REMARK 3 T TENSOR REMARK 3 T11: 0.9019 T22: 0.8674 REMARK 3 T33: 0.3400 T12: 0.3608 REMARK 3 T13: -0.0319 T23: 0.0471 REMARK 3 L TENSOR REMARK 3 L11: 2.3121 L22: 0.3828 REMARK 3 L33: 0.1565 L12: 0.8394 REMARK 3 L13: 0.5266 L23: 0.2527 REMARK 3 S TENSOR REMARK 3 S11: 0.1507 S12: 2.1022 S13: 0.2374 REMARK 3 S21: -1.2674 S22: -0.5212 S23: -0.1654 REMARK 3 S31: -0.2589 S32: 0.8153 S33: -0.7445 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 70 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.5706 -6.5298 -11.8970 REMARK 3 T TENSOR REMARK 3 T11: 0.3420 T22: 0.4719 REMARK 3 T33: 0.4130 T12: 0.1577 REMARK 3 T13: 0.0058 T23: 0.0161 REMARK 3 L TENSOR REMARK 3 L11: 0.5242 L22: 0.6617 REMARK 3 L33: 0.3345 L12: 0.2542 REMARK 3 L13: -0.1776 L23: -0.1789 REMARK 3 S TENSOR REMARK 3 S11: 0.2115 S12: -0.1202 S13: -0.0124 REMARK 3 S21: -0.1755 S22: -0.1287 S23: -0.2587 REMARK 3 S31: 0.0577 S32: 0.4889 S33: -0.0004 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 84 THROUGH 88 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.0865 -6.2990 -11.2060 REMARK 3 T TENSOR REMARK 3 T11: 0.2345 T22: 0.4890 REMARK 3 T33: 0.4839 T12: -0.0012 REMARK 3 T13: 0.0380 T23: -0.0277 REMARK 3 L TENSOR REMARK 3 L11: 0.0077 L22: 0.0215 REMARK 3 L33: 0.0354 L12: 0.0132 REMARK 3 L13: -0.0208 L23: -0.0274 REMARK 3 S TENSOR REMARK 3 S11: -0.8072 S12: -0.0312 S13: -0.3483 REMARK 3 S21: 0.2258 S22: 0.5886 S23: -0.1947 REMARK 3 S31: -0.2683 S32: 0.5028 S33: -0.0034 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 17 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.0208 8.9701 -17.8058 REMARK 3 T TENSOR REMARK 3 T11: 0.4063 T22: 0.3727 REMARK 3 T33: 0.3751 T12: 0.0520 REMARK 3 T13: -0.0045 T23: 0.0669 REMARK 3 L TENSOR REMARK 3 L11: 0.1437 L22: 0.6321 REMARK 3 L33: 0.3466 L12: -0.1133 REMARK 3 L13: -0.1161 L23: -0.2762 REMARK 3 S TENSOR REMARK 3 S11: 0.1520 S12: 0.3648 S13: 0.4598 REMARK 3 S21: 0.2287 S22: 0.0484 S23: 0.4180 REMARK 3 S31: -0.1999 S32: -0.4672 S33: 0.0010 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 28 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.3495 13.2602 -15.6001 REMARK 3 T TENSOR REMARK 3 T11: 0.3712 T22: 0.2404 REMARK 3 T33: 0.3762 T12: 0.0244 REMARK 3 T13: -0.0201 T23: 0.0283 REMARK 3 L TENSOR REMARK 3 L11: 0.8035 L22: 0.0415 REMARK 3 L33: 0.9151 L12: -0.1525 REMARK 3 L13: 0.1606 L23: -0.0714 REMARK 3 S TENSOR REMARK 3 S11: 0.0628 S12: 0.1112 S13: 0.3857 REMARK 3 S21: -0.1035 S22: -0.2043 S23: 0.0474 REMARK 3 S31: -0.1198 S32: -0.0494 S33: -0.0013 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 43 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.0502 3.2768 -10.1086 REMARK 3 T TENSOR REMARK 3 T11: 0.2512 T22: 0.2368 REMARK 3 T33: 0.2988 T12: 0.0083 REMARK 3 T13: -0.0103 T23: 0.0115 REMARK 3 L TENSOR REMARK 3 L11: 0.1931 L22: 0.6085 REMARK 3 L33: 0.4602 L12: 0.0360 REMARK 3 L13: 0.1459 L23: -0.1930 REMARK 3 S TENSOR REMARK 3 S11: 0.3549 S12: 0.0389 S13: -0.1983 REMARK 3 S21: -0.0097 S22: -0.2011 S23: -0.1152 REMARK 3 S31: 0.0870 S32: -0.1303 S33: -0.0003 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 54 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.6485 12.8354 -7.9832 REMARK 3 T TENSOR REMARK 3 T11: 0.6109 T22: 0.2402 REMARK 3 T33: 0.4408 T12: 0.0249 REMARK 3 T13: 0.1276 T23: -0.0664 REMARK 3 L TENSOR REMARK 3 L11: 1.1194 L22: 0.6042 REMARK 3 L33: 2.1801 L12: -0.7366 REMARK 3 L13: 0.1733 L23: 0.2136 REMARK 3 S TENSOR REMARK 3 S11: 0.7990 S12: 0.4898 S13: 0.6539 REMARK 3 S21: -0.3684 S22: -0.1632 S23: 0.1727 REMARK 3 S31: -0.5866 S32: 0.2098 S33: 0.1741 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 63 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.5718 2.4914 -4.6500 REMARK 3 T TENSOR REMARK 3 T11: 0.3029 T22: 0.2632 REMARK 3 T33: 0.3176 T12: 0.0337 REMARK 3 T13: 0.0076 T23: -0.0007 REMARK 3 L TENSOR REMARK 3 L11: 0.4881 L22: 0.5603 REMARK 3 L33: 0.9179 L12: 0.5269 REMARK 3 L13: -0.4778 L23: -0.5093 REMARK 3 S TENSOR REMARK 3 S11: 0.1219 S12: -0.4061 S13: 0.1666 REMARK 3 S21: 0.1499 S22: 0.0727 S23: 0.0980 REMARK 3 S31: 0.0868 S32: -0.0283 S33: 0.0000 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 80 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.0136 -9.2503 -16.4143 REMARK 3 T TENSOR REMARK 3 T11: 0.4247 T22: 0.2576 REMARK 3 T33: 0.3184 T12: 0.0480 REMARK 3 T13: -0.0628 T23: -0.0396 REMARK 3 L TENSOR REMARK 3 L11: 0.9955 L22: 0.8457 REMARK 3 L33: 1.1134 L12: -0.8612 REMARK 3 L13: 0.8410 L23: -0.1203 REMARK 3 S TENSOR REMARK 3 S11: 0.3662 S12: 0.3992 S13: -0.1249 REMARK 3 S21: -0.2069 S22: -0.2523 S23: 0.1956 REMARK 3 S31: 0.6024 S32: -0.1878 S33: 0.0289 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 95 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.2323 5.0977 -26.4527 REMARK 3 T TENSOR REMARK 3 T11: 0.5147 T22: 0.5457 REMARK 3 T33: 0.3386 T12: 0.1943 REMARK 3 T13: 0.0200 T23: 0.0875 REMARK 3 L TENSOR REMARK 3 L11: 1.3634 L22: 0.2056 REMARK 3 L33: 0.0821 L12: -0.0475 REMARK 3 L13: 0.0654 L23: -0.0357 REMARK 3 S TENSOR REMARK 3 S11: 0.4079 S12: 0.6831 S13: 0.3084 REMARK 3 S21: -1.1593 S22: -0.5710 S23: -0.2534 REMARK 3 S31: 0.0514 S32: 0.4790 S33: -0.0003 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 107 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.0086 -4.5024 -20.3484 REMARK 3 T TENSOR REMARK 3 T11: 0.4561 T22: 0.4307 REMARK 3 T33: 0.2992 T12: 0.1725 REMARK 3 T13: 0.0546 T23: 0.0354 REMARK 3 L TENSOR REMARK 3 L11: 1.5782 L22: 0.8852 REMARK 3 L33: 0.1613 L12: 0.2363 REMARK 3 L13: 0.2088 L23: 0.3819 REMARK 3 S TENSOR REMARK 3 S11: 0.2507 S12: 0.4880 S13: -0.0813 REMARK 3 S21: -0.4329 S22: -0.3141 S23: -0.1781 REMARK 3 S31: 0.3478 S32: 0.2580 S33: -0.0010 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 138 THROUGH 145 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.3606 -7.5798 -23.2141 REMARK 3 T TENSOR REMARK 3 T11: 0.4913 T22: 0.2951 REMARK 3 T33: 0.2727 T12: 0.1867 REMARK 3 T13: -0.0823 T23: -0.1053 REMARK 3 L TENSOR REMARK 3 L11: 2.5955 L22: 1.2158 REMARK 3 L33: 0.2218 L12: -0.9959 REMARK 3 L13: 0.7353 L23: -0.3542 REMARK 3 S TENSOR REMARK 3 S11: 0.4140 S12: 0.7362 S13: 0.1209 REMARK 3 S21: -0.6536 S22: -0.5965 S23: -0.0630 REMARK 3 S31: 0.1562 S32: 0.1892 S33: -0.2202 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 146 THROUGH 170 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.5853 -3.3074 -16.4670 REMARK 3 T TENSOR REMARK 3 T11: 0.3355 T22: 0.3566 REMARK 3 T33: 0.2864 T12: 0.0931 REMARK 3 T13: 0.0697 T23: 0.0101 REMARK 3 L TENSOR REMARK 3 L11: 1.0256 L22: 1.2517 REMARK 3 L33: 0.6829 L12: -0.3312 REMARK 3 L13: 0.5699 L23: 0.5153 REMARK 3 S TENSOR REMARK 3 S11: 0.2299 S12: 0.2572 S13: 0.2860 REMARK 3 S21: -0.5092 S22: -0.1551 S23: 0.1654 REMARK 3 S31: 0.2328 S32: 0.3321 S33: -0.0080 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ZNO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1292121567. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-NOV-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22859 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 43.110 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 15.33 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04700 REMARK 200 FOR THE DATA SET : 27.9300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 16.12 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5GPI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE 0.2 M AMMONIUM REMARK 280 SULFATE 24 % PEG 2000, PH 4.6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+1/4 REMARK 290 8555 -Y,-X,-Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 107.78000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 161.67000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 53.89000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 107.78000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 53.89000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 161.67000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 356 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 44 REMARK 465 THR A 45 REMARK 465 GLY A 46 REMARK 465 LYS A 47 REMARK 465 SER A 48 REMARK 465 VAL A 49 REMARK 465 GLU A 89 REMARK 465 ASP A 90 REMARK 465 GLY A 91 REMARK 465 PRO A 92 REMARK 465 PRO A 93 REMARK 465 MET A 94 REMARK 465 ARG A 95 REMARK 465 GLU A 96 REMARK 465 GLY B 0 REMARK 465 SER B 1 REMARK 465 GLY B 2 REMARK 465 ALA B 3 REMARK 465 LEU B 4 REMARK 465 TRP B 5 REMARK 465 ASP B 6 REMARK 465 VAL B 7 REMARK 465 PRO B 8 REMARK 465 ALA B 9 REMARK 465 PRO B 10 REMARK 465 LYS B 11 REMARK 465 GLU B 12 REMARK 465 VAL B 13 REMARK 465 LYS B 14 REMARK 465 LYS B 15 REMARK 465 GLY B 16 REMARK 465 GLU B 171 REMARK 465 GLU B 172 REMARK 465 GLU B 173 REMARK 465 THR B 174 REMARK 465 PRO B 175 REMARK 465 VAL B 176 REMARK 465 GLU B 177 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 63 CG CD CE NZ REMARK 470 ASP A 64 CG OD1 OD2 REMARK 470 GLU A 66 CD OE1 OE2 REMARK 470 ARG A 73 CD NE CZ NH1 NH2 REMARK 470 LEU A 86 CD1 REMARK 470 GLU A 88 CG CD OE1 OE2 REMARK 470 THR B 18 OG1 CG2 REMARK 470 ARG B 29 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 62 CG CD OE1 OE2 REMARK 470 LYS B 107 CD CE NZ REMARK 470 ILE B 109 CD1 REMARK 470 LYS B 117 CD CE NZ REMARK 470 LYS B 119 CG CD CE NZ REMARK 470 LYS B 142 CG CD CE NZ REMARK 470 VAL B 155 CG1 CG2 REMARK 470 LYS B 157 CG CD CE NZ REMARK 470 ASN B 158 CG OD1 ND2 REMARK 470 LYS B 169 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP B 90 OG SER B 93 1.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU B 30 -167.47 -110.64 REMARK 500 CYS B 80 -4.53 76.91 REMARK 500 ASN B 158 -8.35 -54.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 JQI B 201 DBREF 7ZNO A 46 96 UNP Q32ZE1 POLG_ZIKV 1414 1464 DBREF 7ZNO B 1 177 UNP Q32ZE1 POLG_ZIKV 1499 1675 SEQADV 7ZNO MET A 44 UNP Q32ZE1 INITIATING METHIONINE SEQADV 7ZNO THR A 45 UNP Q32ZE1 EXPRESSION TAG SEQADV 7ZNO GLY B 0 UNP Q32ZE1 EXPRESSION TAG SEQADV 7ZNO LYS B 107 UNP Q32ZE1 ARG 1605 CONFLICT SEQRES 1 A 53 MET THR GLY LYS SER VAL ASP MET TYR ILE GLU ARG ALA SEQRES 2 A 53 GLY ASP ILE THR TRP GLU LYS ASP ALA GLU VAL THR GLY SEQRES 3 A 53 ASN SER PRO ARG LEU ASP VAL ALA LEU ASP GLU SER GLY SEQRES 4 A 53 ASP PHE SER LEU VAL GLU GLU ASP GLY PRO PRO MET ARG SEQRES 5 A 53 GLU SEQRES 1 B 178 GLY SER GLY ALA LEU TRP ASP VAL PRO ALA PRO LYS GLU SEQRES 2 B 178 VAL LYS LYS GLY GLU THR THR ASP GLY VAL TYR ARG VAL SEQRES 3 B 178 MET THR ARG ARG LEU LEU GLY SER THR GLN VAL GLY VAL SEQRES 4 B 178 GLY VAL MET GLN GLU GLY VAL PHE HIS THR MET TRP HIS SEQRES 5 B 178 VAL THR LYS GLY ALA ALA LEU ARG SER GLY GLU GLY ARG SEQRES 6 B 178 LEU ASP PRO TYR TRP GLY ASP VAL LYS GLN ASP LEU VAL SEQRES 7 B 178 SER TYR CYS GLY PRO TRP LYS LEU ASP ALA ALA TRP ASP SEQRES 8 B 178 GLY LEU SER GLU VAL GLN LEU LEU ALA VAL PRO PRO GLY SEQRES 9 B 178 GLU ARG ALA LYS ASN ILE GLN THR LEU PRO GLY ILE PHE SEQRES 10 B 178 LYS THR LYS ASP GLY ASP ILE GLY ALA VAL ALA LEU ASP SEQRES 11 B 178 TYR PRO ALA GLY THR SER GLY SER PRO ILE LEU ASP LYS SEQRES 12 B 178 CYS GLY ARG VAL ILE GLY LEU TYR GLY ASN GLY VAL VAL SEQRES 13 B 178 ILE LYS ASN GLY SER TYR VAL SER ALA ILE THR GLN GLY SEQRES 14 B 178 LYS ARG GLU GLU GLU THR PRO VAL GLU HET JQI B 201 34 HETNAM JQI [(1R)-1-[[(2S)-6-AZANYL-2-[[(2S)-6-AZANYL-2-[2-[3-(4- HETNAM 2 JQI CARBAMIMIDAMIDO-3-OXIDANYLIDENE-PENTYL) HETNAM 3 JQI PHENYL]ETHANOYLAMINO]HEXANOYL]AMINO]HEXANOYL]AMINO]-3- HETNAM 4 JQI METHYL-BUTYL]BORONIC ACID HETSYN JQI (2R,3S,4R,5R,6R)-6-((1R,2R,3S,4R,6S)-4,6-DIAMINO-2,3- HETSYN 2 JQI DIHYDROXYCYCLOHEXYLOXY)-5-AMINO-2-(AMINOMETHYL)- HETSYN 3 JQI TETRAHYDRO-2H-PYRA N-3,4-DIOL; NEOMYCIN A; NEAMINE; HETSYN 4 JQI (1R,2R,3S,4R,6S)-4,6-DIAMINO-2,3-DIHYDROXYCYCLOHEXYL HETSYN 5 JQI 2,6-DIAMINO-2,6-DIDEOXY-ALPHA-D-GLUCOSIDE; (1R,2R,3S, HETSYN 6 JQI 4R,6S)-4,6-DIAMINO-2,3-DIHYDROXYCYCLOHEXYL 2,6- HETSYN 7 JQI DIAMINO-2,6-DIDEOXY-D-GLUCOSIDE; (1R,2R,3S,4R,6S)-4,6- HETSYN 8 JQI DIAMINO-2,3-DIHYDROXYCYCLOHEXYL 2,6-DIAMINO-2,6- HETSYN 9 JQI DIDEOXY-GLUCOSIDE FORMUL 3 JQI C31 H55 B N8 O6 FORMUL 4 HOH *75(H2 O) HELIX 1 AA1 MET B 49 LYS B 54 1 6 SHEET 1 AA1 8 GLY B 63 LEU B 65 0 SHEET 2 AA1 8 LEU B 58 SER B 60 -1 N LEU B 58 O LEU B 65 SHEET 3 AA1 8 MET A 51 GLY A 57 1 N MET A 51 O ARG B 59 SHEET 4 AA1 8 GLY B 21 THR B 27 -1 O MET B 26 N TYR A 52 SHEET 5 AA1 8 THR B 34 GLN B 42 -1 O MET B 41 N GLY B 21 SHEET 6 AA1 8 VAL B 45 THR B 48 -1 O HIS B 47 N VAL B 40 SHEET 7 AA1 8 LEU B 76 TYR B 79 -1 O VAL B 77 N THR B 48 SHEET 8 AA1 8 PRO B 67 ASP B 71 -1 N TYR B 68 O SER B 78 SHEET 1 AA2 5 GLU A 66 VAL A 67 0 SHEET 2 AA2 5 LYS B 107 THR B 111 1 O GLN B 110 N GLU A 66 SHEET 3 AA2 5 VAL B 95 ALA B 99 -1 N VAL B 95 O THR B 111 SHEET 4 AA2 5 SER B 137 LEU B 140 -1 O LEU B 140 N GLN B 96 SHEET 5 AA2 5 VAL B 146 TYR B 150 -1 O GLY B 148 N ILE B 139 SHEET 1 AA3 6 PHE A 84 LEU A 86 0 SHEET 2 AA3 6 ARG A 73 LEU A 78 -1 N ALA A 77 O SER A 85 SHEET 3 AA3 6 GLY B 114 THR B 118 1 O LYS B 117 N LEU A 74 SHEET 4 AA3 6 GLY B 121 VAL B 126 -1 O ILE B 123 N PHE B 116 SHEET 5 AA3 6 TYR B 161 ALA B 164 -1 O SER B 163 N VAL B 126 SHEET 6 AA3 6 GLY B 153 VAL B 155 -1 N VAL B 154 O VAL B 162 LINK OG SER B 135 B JQI B 201 1555 1555 1.47 CRYST1 42.397 42.397 215.560 90.00 90.00 90.00 P 43 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023587 0.000000 0.000000 0.00000 SCALE2 0.000000 0.023587 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004639 0.00000