HEADER IMMUNE SYSTEM 26-APR-22 7ZOZ TITLE CRYSTAL STRUCTURE OF SIGLEC-15 IN COMPLEX WITH FAB COMPND MOL_ID: 1; COMPND 2 MOLECULE: SIALIC ACID-BINDING IG-LIKE LECTIN 15; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SIGLEC-15,CD33 ANTIGEN-LIKE 3; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: ANTI-SIGLEC 15 FAB HC; COMPND 8 CHAIN: H; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: ANTI-SIGLEC 15 FAB LC; COMPND 12 CHAIN: L; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SIGLEC15, CD33L3; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 14 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 16 MOL_ID: 3; SOURCE 17 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 18 ORGANISM_COMMON: HUMAN; SOURCE 19 ORGANISM_TAXID: 9606; SOURCE 20 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 21 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS SIALIC ACID, SIGLEC, IMMUNE SYSTEM, CANCER EXPDTA X-RAY DIFFRACTION AUTHOR M.P.LENZA,I.OYENARTE,J.JIMENEZ-BARBERO,J.ERENO-ORBEA REVDAT 2 07-FEB-24 7ZOZ 1 REMARK REVDAT 1 28-JUN-23 7ZOZ 0 JRNL AUTH M.P.LENZA,L.EGIA-MENDIKUTE,A.ANTONANA-VILDOSOLA,C.O.SOARES, JRNL AUTH 2 H.COELHO,F.CORZANA,A.BOSCH,P.MANISHA,J.I.QUINTANA, JRNL AUTH 3 I.OYENARTE,L.UNIONE,M.J.MOURE,M.AZKARGORTA,U.ATXABAL, JRNL AUTH 4 K.SOBCZAK,F.ELORTZA,J.D.SUTHERLAND,R.BARRIO,F.MARCELO, JRNL AUTH 5 J.JIMENEZ-BARBERO,A.PALAZON,J.ERENO-ORBEA JRNL TITL STRUCTURAL INSIGHTS INTO SIGLEC-15 REVEAL GLYCOSYLATION JRNL TITL 2 DEPENDENCY FOR ITS INTERACTION WITH T CELLS THROUGH INTEGRIN JRNL TITL 3 CD11B. JRNL REF NAT COMMUN V. 14 3496 2023 JRNL REFN ESSN 2041-1723 JRNL PMID 37311743 JRNL DOI 10.1038/S41467-023-39119-8 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 106.34 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.8 REMARK 3 NUMBER OF REFLECTIONS : 37149 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 1898 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1106.3400 - 5.0719 0.99 2766 144 0.1906 0.2229 REMARK 3 2 5.0719 - 4.0256 1.00 2685 166 0.1472 0.1720 REMARK 3 3 4.0256 - 3.5167 0.76 2054 111 0.1603 0.1958 REMARK 3 4 3.5167 - 3.1952 1.00 2692 143 0.1692 0.1919 REMARK 3 5 3.1952 - 2.9661 1.00 2678 139 0.1739 0.2248 REMARK 3 6 2.9661 - 2.7912 1.00 2694 139 0.1812 0.2277 REMARK 3 7 2.7912 - 2.6514 1.00 2666 142 0.1792 0.2804 REMARK 3 8 2.6514 - 2.5360 1.00 2661 147 0.1822 0.2723 REMARK 3 9 2.5360 - 2.4384 1.00 2659 133 0.1855 0.2410 REMARK 3 10 2.4384 - 2.3542 0.99 2656 149 0.1807 0.2487 REMARK 3 11 2.3542 - 2.2806 0.99 2650 153 0.1851 0.2143 REMARK 3 12 2.2806 - 2.2154 0.51 1357 67 0.2212 0.3392 REMARK 3 13 2.2154 - 2.1571 0.96 2579 137 0.2120 0.2817 REMARK 3 14 2.1571 - 2.1045 0.92 2454 128 0.2460 0.3141 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.340 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -37.9702 1.4837 14.5035 REMARK 3 T TENSOR REMARK 3 T11: 0.1981 T22: 0.1856 REMARK 3 T33: 0.2420 T12: 0.0026 REMARK 3 T13: 0.0241 T23: -0.0052 REMARK 3 L TENSOR REMARK 3 L11: 1.5148 L22: 0.3483 REMARK 3 L33: 1.0805 L12: -0.1391 REMARK 3 L13: 0.7814 L23: -0.1015 REMARK 3 S TENSOR REMARK 3 S11: 0.0029 S12: -0.1823 S13: -0.0365 REMARK 3 S21: 0.0199 S22: 0.0165 S23: -0.0447 REMARK 3 S31: 0.0078 S32: 0.0303 S33: -0.0365 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ZOZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-APR-22. REMARK 100 THE DEPOSITION ID IS D_1292122624. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-SEP-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97925 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37172 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.104 REMARK 200 RESOLUTION RANGE LOW (A) : 106.342 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.63300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5VKK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 % PEG 3350 0.2 M CALCIUM CHLORIDE, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 108.26700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.26250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 108.26700 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.26250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE A 20 REMARK 465 VAL A 21 REMARK 465 ARG A 22 REMARK 465 THR A 23 REMARK 465 LYS A 24 REMARK 465 ILE A 25 REMARK 465 ASP A 26 REMARK 465 THR A 27 REMARK 465 THR A 28 REMARK 465 GLU A 29 REMARK 465 ASN A 30 REMARK 465 LEU A 31 REMARK 465 LEU A 32 REMARK 465 ASN A 33 REMARK 465 THR A 34 REMARK 465 GLU A 35 REMARK 465 VAL A 36 REMARK 465 HIS A 37 REMARK 465 SER A 38 REMARK 465 SER A 39 REMARK 465 PRO A 40 REMARK 465 ALA A 41 REMARK 465 ALA A 167 REMARK 465 PRO A 168 REMARK 465 ARG A 169 REMARK 465 ILE A 170 REMARK 465 VAL A 171 REMARK 465 ASN A 172 REMARK 465 ILE A 173 REMARK 465 SER A 174 REMARK 465 VAL A 175 REMARK 465 LEU A 176 REMARK 465 PRO A 177 REMARK 465 SER A 178 REMARK 465 PRO A 179 REMARK 465 ALA A 180 REMARK 465 HIS A 181 REMARK 465 ALA A 182 REMARK 465 PHE A 183 REMARK 465 ARG A 184 REMARK 465 ALA A 185 REMARK 465 LEU A 186 REMARK 465 CYS A 187 REMARK 465 THR A 188 REMARK 465 ALA A 189 REMARK 465 GLU A 190 REMARK 465 GLY A 191 REMARK 465 GLU A 192 REMARK 465 PRO A 193 REMARK 465 PRO A 194 REMARK 465 PRO A 195 REMARK 465 ALA A 196 REMARK 465 LEU A 197 REMARK 465 ALA A 198 REMARK 465 TRP A 199 REMARK 465 SER A 200 REMARK 465 GLY A 201 REMARK 465 PRO A 202 REMARK 465 ALA A 203 REMARK 465 LEU A 204 REMARK 465 GLY A 205 REMARK 465 ASN A 206 REMARK 465 SER A 207 REMARK 465 LEU A 208 REMARK 465 ALA A 209 REMARK 465 ALA A 210 REMARK 465 VAL A 211 REMARK 465 ARG A 212 REMARK 465 SER A 213 REMARK 465 PRO A 214 REMARK 465 ARG A 215 REMARK 465 GLU A 216 REMARK 465 GLY A 217 REMARK 465 HIS A 218 REMARK 465 GLY A 219 REMARK 465 HIS A 220 REMARK 465 LEU A 221 REMARK 465 VAL A 222 REMARK 465 THR A 223 REMARK 465 ALA A 224 REMARK 465 GLU A 225 REMARK 465 LEU A 226 REMARK 465 PRO A 227 REMARK 465 ALA A 228 REMARK 465 LEU A 229 REMARK 465 THR A 230 REMARK 465 HIS A 231 REMARK 465 ASP A 232 REMARK 465 GLY A 233 REMARK 465 ARG A 234 REMARK 465 TYR A 235 REMARK 465 THR A 236 REMARK 465 CYS A 237 REMARK 465 THR A 238 REMARK 465 ALA A 239 REMARK 465 ALA A 240 REMARK 465 ASN A 241 REMARK 465 SER A 242 REMARK 465 LEU A 243 REMARK 465 GLY A 244 REMARK 465 ARG A 245 REMARK 465 SER A 246 REMARK 465 GLU A 247 REMARK 465 ALA A 248 REMARK 465 SER A 249 REMARK 465 VAL A 250 REMARK 465 TYR A 251 REMARK 465 LEU A 252 REMARK 465 PHE A 253 REMARK 465 ARG A 254 REMARK 465 PHE A 255 REMARK 465 HIS A 256 REMARK 465 GLY A 257 REMARK 465 ALA A 258 REMARK 465 SER A 259 REMARK 465 GLY A 260 REMARK 465 ALA A 261 REMARK 465 SER A 262 REMARK 465 THR A 263 REMARK 465 VAL A 264 REMARK 465 ALA A 265 REMARK 465 LEU A 266 REMARK 465 LEU A 267 REMARK 465 LEU A 268 REMARK 465 GLY A 269 REMARK 465 ALA A 270 REMARK 465 LEU A 271 REMARK 465 GLY A 272 REMARK 465 PHE A 273 REMARK 465 LYS A 274 REMARK 465 ALA A 275 REMARK 465 LEU A 276 REMARK 465 LEU A 277 REMARK 465 LEU A 278 REMARK 465 LEU A 279 REMARK 465 GLY A 280 REMARK 465 VAL A 281 REMARK 465 LEU A 282 REMARK 465 ALA A 283 REMARK 465 ALA A 284 REMARK 465 ARG A 285 REMARK 465 ALA A 286 REMARK 465 ALA A 287 REMARK 465 ARG A 288 REMARK 465 ARG A 289 REMARK 465 ARG A 290 REMARK 465 PRO A 291 REMARK 465 GLU A 292 REMARK 465 HIS A 293 REMARK 465 LEU A 294 REMARK 465 ASP A 295 REMARK 465 THR A 296 REMARK 465 PRO A 297 REMARK 465 ASP A 298 REMARK 465 THR A 299 REMARK 465 PRO A 300 REMARK 465 PRO A 301 REMARK 465 ARG A 302 REMARK 465 SER A 303 REMARK 465 GLN A 304 REMARK 465 ALA A 305 REMARK 465 GLN A 306 REMARK 465 GLU A 307 REMARK 465 SER A 308 REMARK 465 ASN A 309 REMARK 465 TYR A 310 REMARK 465 GLU A 311 REMARK 465 ASN A 312 REMARK 465 LEU A 313 REMARK 465 SER A 314 REMARK 465 GLN A 315 REMARK 465 MET A 316 REMARK 465 ASN A 317 REMARK 465 PRO A 318 REMARK 465 ARG A 319 REMARK 465 SER A 320 REMARK 465 PRO A 321 REMARK 465 PRO A 322 REMARK 465 ALA A 323 REMARK 465 THR A 324 REMARK 465 MET A 325 REMARK 465 CYS A 326 REMARK 465 SER A 327 REMARK 465 PRO A 328 REMARK 465 SER H 218 REMARK 465 CYS H 219 REMARK 465 CYS L 214 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH H 346 O HOH H 421 2.14 REMARK 500 O HOH L 304 O HOH L 418 2.15 REMARK 500 O HOH H 302 O HOH H 318 2.16 REMARK 500 O HOH H 326 O HOH H 406 2.17 REMARK 500 O HOH H 338 O HOH H 427 2.18 REMARK 500 O HOH H 348 O HOH H 384 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 87 -22.00 69.23 REMARK 500 HIS A 111 13.55 57.59 REMARK 500 ASP A 137 97.37 -67.47 REMARK 500 SER H 55 -4.22 -140.34 REMARK 500 ALA L 51 -24.33 71.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7ZOR RELATED DB: PDB DBREF 7ZOZ A 20 328 UNP Q6ZMC9 SIG15_HUMAN 20 328 DBREF 7ZOZ H 1 219 PDB 7ZOZ 7ZOZ 1 219 DBREF 7ZOZ L 1 214 PDB 7ZOZ 7ZOZ 1 214 SEQRES 1 A 309 PHE VAL ARG THR LYS ILE ASP THR THR GLU ASN LEU LEU SEQRES 2 A 309 ASN THR GLU VAL HIS SER SER PRO ALA GLN ARG TRP SER SEQRES 3 A 309 MET GLN VAL PRO PRO GLU VAL SER ALA GLU ALA GLY ASP SEQRES 4 A 309 ALA ALA VAL LEU PRO CYS THR PHE THR HIS PRO HIS ARG SEQRES 5 A 309 HIS TYR ASP GLY PRO LEU THR ALA ILE TRP ARG ALA GLY SEQRES 6 A 309 GLU PRO TYR ALA GLY PRO GLN VAL PHE ARG CYS ALA ALA SEQRES 7 A 309 ALA ARG GLY SER GLU LEU CYS GLN THR ALA LEU SER LEU SEQRES 8 A 309 HIS GLY ARG PHE ARG LEU LEU GLY ASN PRO ARG ARG ASN SEQRES 9 A 309 ASP LEU SER LEU ARG VAL GLU ARG LEU ALA LEU ALA ASP SEQRES 10 A 309 ASP ARG ARG TYR PHE CYS ARG VAL GLU PHE ALA GLY ASP SEQRES 11 A 309 VAL HIS ASP ARG TYR GLU SER ARG HIS GLY VAL ARG LEU SEQRES 12 A 309 HIS VAL THR ALA ALA PRO ARG ILE VAL ASN ILE SER VAL SEQRES 13 A 309 LEU PRO SER PRO ALA HIS ALA PHE ARG ALA LEU CYS THR SEQRES 14 A 309 ALA GLU GLY GLU PRO PRO PRO ALA LEU ALA TRP SER GLY SEQRES 15 A 309 PRO ALA LEU GLY ASN SER LEU ALA ALA VAL ARG SER PRO SEQRES 16 A 309 ARG GLU GLY HIS GLY HIS LEU VAL THR ALA GLU LEU PRO SEQRES 17 A 309 ALA LEU THR HIS ASP GLY ARG TYR THR CYS THR ALA ALA SEQRES 18 A 309 ASN SER LEU GLY ARG SER GLU ALA SER VAL TYR LEU PHE SEQRES 19 A 309 ARG PHE HIS GLY ALA SER GLY ALA SER THR VAL ALA LEU SEQRES 20 A 309 LEU LEU GLY ALA LEU GLY PHE LYS ALA LEU LEU LEU LEU SEQRES 21 A 309 GLY VAL LEU ALA ALA ARG ALA ALA ARG ARG ARG PRO GLU SEQRES 22 A 309 HIS LEU ASP THR PRO ASP THR PRO PRO ARG SER GLN ALA SEQRES 23 A 309 GLN GLU SER ASN TYR GLU ASN LEU SER GLN MET ASN PRO SEQRES 24 A 309 ARG SER PRO PRO ALA THR MET CYS SER PRO SEQRES 1 H 225 GLN VAL GLN LEU GLN GLN PRO GLY ALA GLU LEU VAL LYS SEQRES 2 H 225 PRO GLY ALA SER VAL LYS MET SER CYS LYS ALA SER GLY SEQRES 3 H 225 TYR THR PHE THR SER TYR TRP ILE THR TRP VAL ILE GLN SEQRES 4 H 225 ARG PRO GLY GLN GLY LEU GLU TRP ILE GLY ASP ILE TYR SEQRES 5 H 225 CYS GLY SER ASP THR MET HIS TYR ASN GLU LYS PHE LYS SEQRES 6 H 225 ASN LYS ALA THR LEU THR VAL ASP THR SER SER SER THR SEQRES 7 H 225 ALA TYR MET GLN LEU SER SER LEU THR SER GLU ASP SER SEQRES 8 H 225 ALA VAL TYR TYR CYS ALA ARG TRP TRP ASP TYR GLY SER SEQRES 9 H 225 SER TYR ASP TYR PHE ASP TYR TRP GLY GLN GLY THR THR SEQRES 10 H 225 LEU THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL SEQRES 11 H 225 PHE PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY SEQRES 12 H 225 THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO SEQRES 13 H 225 GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SEQRES 14 H 225 SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER SEQRES 15 H 225 GLY LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SEQRES 16 H 225 SER SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN SEQRES 17 H 225 HIS LYS PRO SER ASN THR LYS VAL ASP LYS ARG VAL GLU SEQRES 18 H 225 PRO LYS SER CYS SEQRES 1 L 214 ASP ILE LYS MET THR GLN SER PRO SER SER MET TYR ALA SEQRES 2 L 214 SER LEU GLY GLU ARG VAL THR ILE THR CYS LYS ALA SER SEQRES 3 L 214 GLN ASP ILE ASN SER TYR LEU SER TRP PHE GLN GLN LYS SEQRES 4 L 214 PRO GLY LYS SER PRO LYS THR LEU ILE TYR ARG ALA ASN SEQRES 5 L 214 ARG LEU VAL ASP GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 214 GLY SER GLY GLN ASP TYR SER LEU THR ILE SER SER LEU SEQRES 7 L 214 GLU TYR GLU ASP MET GLY ILE TYR TYR CYS LEU GLN TYR SEQRES 8 L 214 ASP GLU PHE PRO TYR THR PHE GLY GLY GLY THR LYS LEU SEQRES 9 L 214 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 L 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 L 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 L 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 L 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 L 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 L 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 L 214 PHE ASN ARG GLY GLU CYS FORMUL 4 HOH *305(H2 O) HELIX 1 AA1 ASN A 119 ASN A 123 5 5 HELIX 2 AA2 ALA A 133 ASP A 137 5 5 HELIX 3 AA3 THR H 28 SER H 31 5 4 HELIX 4 AA4 GLU H 63 LYS H 66 5 4 HELIX 5 AA5 THR H 86 SER H 90 5 5 HELIX 6 AA6 SER H 130 LYS H 132 5 3 HELIX 7 AA7 SER H 159 ALA H 161 5 3 HELIX 8 AA8 SER H 190 THR H 194 5 5 HELIX 9 AA9 LYS H 204 ASN H 207 5 4 HELIX 10 AB1 GLU L 79 MET L 83 5 5 HELIX 11 AB2 SER L 121 LYS L 126 1 6 HELIX 12 AB3 LYS L 183 LYS L 188 1 6 SHEET 1 AA1 2 SER A 45 GLN A 47 0 SHEET 2 AA1 2 THR A 65 THR A 67 -1 O THR A 65 N GLN A 47 SHEET 1 AA2 6 GLU A 51 GLU A 55 0 SHEET 2 AA2 6 VAL A 160 THR A 165 1 O HIS A 163 N VAL A 52 SHEET 3 AA2 6 ARG A 139 PHE A 146 -1 N TYR A 140 O VAL A 160 SHEET 4 AA2 6 LEU A 77 ALA A 83 -1 N ILE A 80 O ARG A 143 SHEET 5 AA2 6 GLN A 91 ALA A 97 -1 O ALA A 97 N LEU A 77 SHEET 6 AA2 6 CYS A 104 SER A 109 -1 O ALA A 107 N ARG A 94 SHEET 1 AA3 4 GLU A 51 GLU A 55 0 SHEET 2 AA3 4 VAL A 160 THR A 165 1 O HIS A 163 N VAL A 52 SHEET 3 AA3 4 ARG A 139 PHE A 146 -1 N TYR A 140 O VAL A 160 SHEET 4 AA3 4 ARG A 153 GLU A 155 -1 O TYR A 154 N VAL A 144 SHEET 1 AA4 3 ALA A 60 LEU A 62 0 SHEET 2 AA4 3 LEU A 127 VAL A 129 -1 O LEU A 127 N LEU A 62 SHEET 3 AA4 3 PHE A 114 LEU A 116 -1 N ARG A 115 O ARG A 128 SHEET 1 AA5 4 GLN H 3 GLN H 5 0 SHEET 2 AA5 4 VAL H 18 SER H 25 -1 O LYS H 23 N GLN H 5 SHEET 3 AA5 4 THR H 80 LEU H 82C-1 O MET H 82A N MET H 20 SHEET 4 AA5 4 ALA H 69 ASP H 74 -1 N THR H 72 O TYR H 82 SHEET 1 AA6 6 ALA H 9 VAL H 12 0 SHEET 2 AA6 6 THR H 110 VAL H 114 1 O THR H 113 N GLU H 10 SHEET 3 AA6 6 ALA H 91 TRP H 99 -1 N ALA H 91 O LEU H 112 SHEET 4 AA6 6 TRP H 33 GLN H 39 -1 N GLN H 39 O VAL H 92 SHEET 5 AA6 6 LEU H 45 TYR H 52 -1 O ILE H 51 N ILE H 34 SHEET 6 AA6 6 MET H 59 TYR H 61 -1 O HIS H 60 N ASP H 50 SHEET 1 AA7 4 ALA H 9 VAL H 12 0 SHEET 2 AA7 4 THR H 110 VAL H 114 1 O THR H 113 N GLU H 10 SHEET 3 AA7 4 ALA H 91 TRP H 99 -1 N ALA H 91 O LEU H 112 SHEET 4 AA7 4 TYR H 102 TRP H 106 -1 O TYR H 102 N TRP H 99 SHEET 1 AA8 4 SER H 123 LEU H 127 0 SHEET 2 AA8 4 THR H 138 TYR H 148 -1 O LEU H 144 N PHE H 125 SHEET 3 AA8 4 TYR H 179 PRO H 188 -1 O LEU H 181 N VAL H 145 SHEET 4 AA8 4 VAL H 166 THR H 168 -1 N HIS H 167 O VAL H 184 SHEET 1 AA9 4 THR H 134 SER H 135 0 SHEET 2 AA9 4 THR H 138 TYR H 148 -1 O THR H 138 N SER H 135 SHEET 3 AA9 4 TYR H 179 PRO H 188 -1 O LEU H 181 N VAL H 145 SHEET 4 AA9 4 VAL H 172 LEU H 173 -1 N VAL H 172 O SER H 180 SHEET 1 AB1 3 THR H 154 TRP H 157 0 SHEET 2 AB1 3 TYR H 197 HIS H 203 -1 O ASN H 200 N SER H 156 SHEET 3 AB1 3 THR H 208 VAL H 214 -1 O VAL H 210 N VAL H 201 SHEET 1 AB2 4 MET L 4 SER L 7 0 SHEET 2 AB2 4 VAL L 19 ALA L 25 -1 O THR L 22 N SER L 7 SHEET 3 AB2 4 ASP L 70 ILE L 75 -1 O ILE L 75 N VAL L 19 SHEET 4 AB2 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AB3 6 SER L 10 SER L 14 0 SHEET 2 AB3 6 THR L 102 LYS L 107 1 O LYS L 107 N ALA L 13 SHEET 3 AB3 6 GLY L 84 GLN L 90 -1 N GLY L 84 O LEU L 104 SHEET 4 AB3 6 LEU L 33 GLN L 38 -1 N GLN L 38 O ILE L 85 SHEET 5 AB3 6 LYS L 45 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 AB3 6 ARG L 53 LEU L 54 -1 O ARG L 53 N TYR L 49 SHEET 1 AB4 4 SER L 10 SER L 14 0 SHEET 2 AB4 4 THR L 102 LYS L 107 1 O LYS L 107 N ALA L 13 SHEET 3 AB4 4 GLY L 84 GLN L 90 -1 N GLY L 84 O LEU L 104 SHEET 4 AB4 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 AB5 4 SER L 114 PHE L 118 0 SHEET 2 AB5 4 THR L 129 PHE L 139 -1 O ASN L 137 N SER L 114 SHEET 3 AB5 4 TYR L 173 SER L 182 -1 O LEU L 179 N VAL L 132 SHEET 4 AB5 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 AB6 4 ALA L 153 LEU L 154 0 SHEET 2 AB6 4 LYS L 145 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 AB6 4 VAL L 191 THR L 197 -1 O ALA L 193 N LYS L 149 SHEET 4 AB6 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SSBOND 1 CYS A 64 CYS A 142 1555 1555 2.04 SSBOND 2 CYS A 95 CYS A 104 1555 1555 2.03 SSBOND 3 CYS H 22 CYS H 95 1555 1555 2.03 SSBOND 4 CYS H 143 CYS H 199 1555 1555 2.07 SSBOND 5 CYS L 23 CYS L 88 1555 1555 2.06 SSBOND 6 CYS L 134 CYS L 194 1555 1555 2.07 CISPEP 1 PHE H 149 PRO H 150 0 -2.42 CISPEP 2 GLU H 151 PRO H 152 0 -4.23 CISPEP 3 SER L 7 PRO L 8 0 -7.29 CISPEP 4 PHE L 94 PRO L 95 0 -6.03 CISPEP 5 TYR L 140 PRO L 141 0 5.74 CRYST1 216.534 60.525 53.373 90.00 100.82 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004618 0.000000 0.000883 0.00000 SCALE2 0.000000 0.016522 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019075 0.00000