HEADER VIRAL PROTEIN 13-MAY-22 7ZV1 TITLE CRYSTAL STRUCTURE OF AICHIVIRUS A 2A PROTEIN L64M, L109M MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN 2A; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: P2A; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: L64M, L109M MUTANT SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AICHI VIRUS A846/88; SOURCE 3 ORGANISM_TAXID: 650132; SOURCE 4 STRAIN: HUMAN/A846/88/1989; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS VIRAL PROTEIN, UNKNOWN FUNCTION, 2A PROTEIN, NLPC/P60 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.VON CASTELMUR,A.PERRAKIS REVDAT 2 19-JUN-24 7ZV1 1 REMARK REVDAT 1 31-MAY-23 7ZV1 0 JRNL AUTH E.VON CASTELMUR,A.PERRAKIS JRNL TITL STRUCTURAL AND FUNCTIONAL REPURPOSING OF PICORNAVIRUS JRNL TITL 2 H/NC-MOTIF 2A PROTEINS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0349 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.74 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 41578 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.082 REMARK 3 FREE R VALUE TEST SET COUNT : 2113 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.74 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.79 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2883 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.77 REMARK 3 BIN R VALUE (WORKING SET) : 0.3060 REMARK 3 BIN FREE R VALUE SET COUNT : 153 REMARK 3 BIN FREE R VALUE : 0.3070 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2476 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 106 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.12200 REMARK 3 B22 (A**2) : -0.75300 REMARK 3 B33 (A**2) : 0.63100 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.105 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.100 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.073 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.831 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2571 ; 0.007 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 2324 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3520 ; 1.329 ; 1.633 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5435 ; 0.441 ; 1.572 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 329 ; 7.085 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 25 ;14.903 ;13.600 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 403 ;11.649 ;10.112 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 397 ; 0.068 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2923 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 493 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 380 ; 0.201 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 61 ; 0.219 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1257 ; 0.175 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 118 ; 0.118 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1292 ; 1.934 ; 2.290 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1292 ; 1.934 ; 2.290 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1611 ; 2.988 ; 3.411 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1612 ; 2.987 ; 3.414 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1279 ; 2.370 ; 2.493 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1280 ; 2.370 ; 2.495 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1903 ; 3.557 ; 3.664 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1904 ; 3.556 ; 3.666 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 3 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 11 A 119 NULL REMARK 3 1 A 11 A 119 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 2 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 2 A 11 A 119 NULL REMARK 3 2 A 11 A 119 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : A REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 3 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 3 A 11 A 119 NULL REMARK 3 3 A 11 A 119 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 11 A 119 REMARK 3 ORIGIN FOR THE GROUP (A): 10.0609 6.6732 103.8906 REMARK 3 T TENSOR REMARK 3 T11: 0.0951 T22: 0.0055 REMARK 3 T33: 0.0668 T12: -0.0127 REMARK 3 T13: -0.0134 T23: -0.0057 REMARK 3 L TENSOR REMARK 3 L11: 0.3087 L22: 2.2952 REMARK 3 L33: 0.9009 L12: -0.0339 REMARK 3 L13: 0.2196 L23: 0.9407 REMARK 3 S TENSOR REMARK 3 S11: 0.0593 S12: 0.0072 S13: -0.0247 REMARK 3 S21: 0.0812 S22: -0.0071 S23: -0.1471 REMARK 3 S31: -0.0839 S32: 0.0222 S33: -0.0522 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 0 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 ORIGIN FOR THE GROUP (A): -7.6250 -16.1135 105.5730 REMARK 3 T TENSOR REMARK 3 T11: 0.0378 T22: 0.0292 REMARK 3 T33: 0.0687 T12: -0.0032 REMARK 3 T13: -0.0102 T23: -0.0016 REMARK 3 L TENSOR REMARK 3 L11: 1.5528 L22: 1.0085 REMARK 3 L33: 0.2947 L12: 0.8682 REMARK 3 L13: -0.4542 L23: -0.1850 REMARK 3 S TENSOR REMARK 3 S11: 0.0405 S12: -0.0658 S13: 0.0080 REMARK 3 S21: 0.0608 S22: -0.0979 S23: -0.0042 REMARK 3 S31: -0.0036 S32: -0.0066 S33: 0.0574 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 0 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 ORIGIN FOR THE GROUP (A): 46.6352 9.0890 84.8159 REMARK 3 T TENSOR REMARK 3 T11: 0.0786 T22: 0.0097 REMARK 3 T33: 0.0755 T12: 0.0127 REMARK 3 T13: -0.0361 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 0.7493 L22: 1.3655 REMARK 3 L33: 2.0057 L12: -0.9171 REMARK 3 L13: 0.6318 L23: -1.0207 REMARK 3 S TENSOR REMARK 3 S11: 0.0674 S12: 0.0076 S13: 0.0507 REMARK 3 S21: -0.1056 S22: -0.0157 S23: 0.0446 REMARK 3 S31: 0.0425 S32: -0.0007 S33: -0.0518 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.00 REMARK 3 ION PROBE RADIUS : 0.70 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 7ZV1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1292123013. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-SEP-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41619 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.740 REMARK 200 RESOLUTION RANGE LOW (A) : 41.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.74 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.77 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.09300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES PH6.75 30% PEG 30000 10MM REMARK 280 TCEP, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.28450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.42900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.72250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.42900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.28450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.72250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 SER A 4 REMARK 465 ALA A 5 REMARK 465 THR A 6 REMARK 465 PRO A 7 REMARK 465 ASP A 8 REMARK 465 VAL A 9 REMARK 465 ASP A 10 REMARK 465 ALA A 120 REMARK 465 ALA A 121 REMARK 465 SER A 122 REMARK 465 ALA A 123 REMARK 465 ALA A 124 REMARK 465 VAL A 125 REMARK 465 ALA A 126 REMARK 465 VAL A 127 REMARK 465 LYS A 128 REMARK 465 ALA A 129 REMARK 465 LEU A 130 REMARK 465 PRO A 131 REMARK 465 GLY A 132 REMARK 465 ILE A 133 REMARK 465 ARG A 134 REMARK 465 ARG A 135 REMARK 465 GLN A 136 REMARK 465 GLY B 1 REMARK 465 ALA B 2 REMARK 465 ALA B 3 REMARK 465 SER B 4 REMARK 465 ALA B 5 REMARK 465 THR B 6 REMARK 465 PRO B 7 REMARK 465 ASP B 8 REMARK 465 VAL B 9 REMARK 465 ALA B 121 REMARK 465 SER B 122 REMARK 465 ALA B 123 REMARK 465 ALA B 124 REMARK 465 VAL B 125 REMARK 465 ALA B 126 REMARK 465 VAL B 127 REMARK 465 LYS B 128 REMARK 465 ALA B 129 REMARK 465 LEU B 130 REMARK 465 PRO B 131 REMARK 465 GLY B 132 REMARK 465 ILE B 133 REMARK 465 ARG B 134 REMARK 465 ARG B 135 REMARK 465 GLN B 136 REMARK 465 GLY C 1 REMARK 465 ALA C 2 REMARK 465 ALA C 3 REMARK 465 SER C 4 REMARK 465 ALA C 5 REMARK 465 THR C 6 REMARK 465 PRO C 7 REMARK 465 ASP C 8 REMARK 465 VAL C 9 REMARK 465 ASN C 104 REMARK 465 THR C 105 REMARK 465 GLY C 106 REMARK 465 PHE C 107 REMARK 465 SER C 108 REMARK 465 MET C 109 REMARK 465 ALA C 110 REMARK 465 LEU C 111 REMARK 465 GLY C 112 REMARK 465 ILE C 113 REMARK 465 GLY C 114 REMARK 465 ALA C 115 REMARK 465 ALA C 123 REMARK 465 ALA C 124 REMARK 465 VAL C 125 REMARK 465 ALA C 126 REMARK 465 VAL C 127 REMARK 465 LYS C 128 REMARK 465 ALA C 129 REMARK 465 LEU C 130 REMARK 465 PRO C 131 REMARK 465 GLY C 132 REMARK 465 ILE C 133 REMARK 465 ARG C 134 REMARK 465 ARG C 135 REMARK 465 GLN C 136 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASP B 12 NH2 ARG C 46 2555 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 43 -151.48 -159.96 REMARK 500 SER A 45 -169.60 -128.99 REMARK 500 ASN A 88 84.30 -153.26 REMARK 500 SER B 43 -149.12 -162.63 REMARK 500 ASN B 88 82.73 -154.02 REMARK 500 SER C 43 -151.94 -157.50 REMARK 500 ILE C 66 -157.39 -131.41 REMARK 500 ASN C 88 81.40 -152.55 REMARK 500 ALA C 121 168.59 80.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 46 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 7ZV1 A 1 136 UNP O91464 POLG_AIVA8 1017 1152 DBREF 7ZV1 B 1 136 UNP O91464 POLG_AIVA8 1017 1152 DBREF 7ZV1 C 1 136 UNP O91464 POLG_AIVA8 1017 1152 SEQADV 7ZV1 MET A 64 UNP O91464 LEU 1080 ENGINEERED MUTATION SEQADV 7ZV1 MET A 109 UNP O91464 LEU 1125 ENGINEERED MUTATION SEQADV 7ZV1 MET B 64 UNP O91464 LEU 1080 ENGINEERED MUTATION SEQADV 7ZV1 MET B 109 UNP O91464 LEU 1125 ENGINEERED MUTATION SEQADV 7ZV1 MET C 64 UNP O91464 LEU 1080 ENGINEERED MUTATION SEQADV 7ZV1 MET C 109 UNP O91464 LEU 1125 ENGINEERED MUTATION SEQRES 1 A 136 GLY ALA ALA SER ALA THR PRO ASP VAL ASP PRO ASP ASP SEQRES 2 A 136 ARG VAL TYR ILE VAL ARG ALA GLN ARG PRO THR TYR VAL SEQRES 3 A 136 HIS TRP ALA ILE ARG LYS VAL ALA PRO ASP GLY SER ALA SEQRES 4 A 136 LYS GLN ILE SER LEU SER ARG SER GLY ILE GLN ALA LEU SEQRES 5 A 136 VAL ALA LEU GLU PRO PRO GLU GLY GLU PRO TYR MET GLU SEQRES 6 A 136 ILE LEU PRO SER HIS TRP THR LEU ALA GLU LEU GLN LEU SEQRES 7 A 136 GLY ASN LYS TRP GLU TYR SER ALA THR ASN ASN CYS THR SEQRES 8 A 136 HIS PHE VAL SER SER ILE THR GLY GLU SER LEU PRO ASN SEQRES 9 A 136 THR GLY PHE SER MET ALA LEU GLY ILE GLY ALA LEU THR SEQRES 10 A 136 ALA ILE ALA ALA SER ALA ALA VAL ALA VAL LYS ALA LEU SEQRES 11 A 136 PRO GLY ILE ARG ARG GLN SEQRES 1 B 136 GLY ALA ALA SER ALA THR PRO ASP VAL ASP PRO ASP ASP SEQRES 2 B 136 ARG VAL TYR ILE VAL ARG ALA GLN ARG PRO THR TYR VAL SEQRES 3 B 136 HIS TRP ALA ILE ARG LYS VAL ALA PRO ASP GLY SER ALA SEQRES 4 B 136 LYS GLN ILE SER LEU SER ARG SER GLY ILE GLN ALA LEU SEQRES 5 B 136 VAL ALA LEU GLU PRO PRO GLU GLY GLU PRO TYR MET GLU SEQRES 6 B 136 ILE LEU PRO SER HIS TRP THR LEU ALA GLU LEU GLN LEU SEQRES 7 B 136 GLY ASN LYS TRP GLU TYR SER ALA THR ASN ASN CYS THR SEQRES 8 B 136 HIS PHE VAL SER SER ILE THR GLY GLU SER LEU PRO ASN SEQRES 9 B 136 THR GLY PHE SER MET ALA LEU GLY ILE GLY ALA LEU THR SEQRES 10 B 136 ALA ILE ALA ALA SER ALA ALA VAL ALA VAL LYS ALA LEU SEQRES 11 B 136 PRO GLY ILE ARG ARG GLN SEQRES 1 C 136 GLY ALA ALA SER ALA THR PRO ASP VAL ASP PRO ASP ASP SEQRES 2 C 136 ARG VAL TYR ILE VAL ARG ALA GLN ARG PRO THR TYR VAL SEQRES 3 C 136 HIS TRP ALA ILE ARG LYS VAL ALA PRO ASP GLY SER ALA SEQRES 4 C 136 LYS GLN ILE SER LEU SER ARG SER GLY ILE GLN ALA LEU SEQRES 5 C 136 VAL ALA LEU GLU PRO PRO GLU GLY GLU PRO TYR MET GLU SEQRES 6 C 136 ILE LEU PRO SER HIS TRP THR LEU ALA GLU LEU GLN LEU SEQRES 7 C 136 GLY ASN LYS TRP GLU TYR SER ALA THR ASN ASN CYS THR SEQRES 8 C 136 HIS PHE VAL SER SER ILE THR GLY GLU SER LEU PRO ASN SEQRES 9 C 136 THR GLY PHE SER MET ALA LEU GLY ILE GLY ALA LEU THR SEQRES 10 C 136 ALA ILE ALA ALA SER ALA ALA VAL ALA VAL LYS ALA LEU SEQRES 11 C 136 PRO GLY ILE ARG ARG GLN FORMUL 4 HOH *106(H2 O) HELIX 1 AA1 LEU A 67 LEU A 76 1 10 HELIX 2 AA2 ASN A 89 GLY A 99 1 11 HELIX 3 AA3 LEU A 111 LEU A 116 5 6 HELIX 4 AA4 PRO B 68 LEU B 76 1 9 HELIX 5 AA5 ASN B 89 GLY B 99 1 11 HELIX 6 AA6 LEU B 111 LEU B 116 5 6 HELIX 7 AA7 LEU C 67 LEU C 76 1 10 HELIX 8 AA8 ASN C 89 GLY C 99 1 11 SHEET 1 AA1 6 GLU A 61 ILE A 66 0 SHEET 2 AA1 6 ARG A 14 GLN A 21 -1 N ILE A 17 O TYR A 63 SHEET 3 AA1 6 VAL A 26 VAL A 33 -1 O VAL A 33 N ARG A 14 SHEET 4 AA1 6 ALA A 39 SER A 47 -1 O ILE A 42 N ILE A 30 SHEET 5 AA1 6 GLN A 50 GLU A 56 -1 O ALA A 54 N SER A 43 SHEET 6 AA1 6 LYS A 81 TRP A 82 -1 O TRP A 82 N ALA A 51 SHEET 1 AA2 6 GLU B 61 ILE B 66 0 SHEET 2 AA2 6 ARG B 14 GLN B 21 -1 N ILE B 17 O TYR B 63 SHEET 3 AA2 6 VAL B 26 VAL B 33 -1 O VAL B 33 N ARG B 14 SHEET 4 AA2 6 ALA B 39 SER B 47 -1 O LYS B 40 N LYS B 32 SHEET 5 AA2 6 GLN B 50 GLU B 56 -1 O ALA B 54 N SER B 43 SHEET 6 AA2 6 LYS B 81 TRP B 82 -1 O TRP B 82 N ALA B 51 SHEET 1 AA3 6 GLU C 61 ILE C 66 0 SHEET 2 AA3 6 ARG C 14 GLN C 21 -1 N ILE C 17 O TYR C 63 SHEET 3 AA3 6 VAL C 26 VAL C 33 -1 O HIS C 27 N ALA C 20 SHEET 4 AA3 6 ALA C 39 SER C 47 -1 O ILE C 42 N ILE C 30 SHEET 5 AA3 6 GLN C 50 GLU C 56 -1 O LEU C 52 N SER C 45 SHEET 6 AA3 6 LYS C 81 TRP C 82 -1 O TRP C 82 N ALA C 51 CRYST1 52.569 77.445 98.858 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019023 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012912 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010116 0.00000