HEADER TRANSCRIPTION 19-MAY-22 7ZWX TITLE CRYSTAL STRUCTURE OF HUMAN BCL6 BTB DOMAIN IN COMPLEX WITH COMPOUND 19 COMPND MOL_ID: 1; COMPND 2 MOLECULE: B-CELL LYMPHOMA 6 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BCL-6,B-CELL LYMPHOMA 5 PROTEIN,BCL-5,PROTEIN LAZ-3,ZINC COMPND 5 FINGER AND BTB DOMAIN-CONTAINING PROTEIN 27,ZINC FINGER PROTEIN 51; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ALA-TRP-VAL-ILE-PRO-ALA; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BCL6, BCL5, LAZ3, ZBTB27, ZNF51; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: AI; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET48B; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630 KEYWDS INHIBITOR, CANCER, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR G.W.COLLIE,Y.-V.LE BIHAN,R.L.M.VAN MONTFORT REVDAT 2 31-JAN-24 7ZWX 1 REMARK REVDAT 1 16-NOV-22 7ZWX 0 JRNL AUTH O.A.PIERRAT,M.LIU,G.W.COLLIE,K.SHETTY,M.J.RODRIGUES, JRNL AUTH 2 Y.V.LE BIHAN,E.A.GUNNELL,P.C.MCANDREW,M.STUBBS,M.G.ROWLANDS, JRNL AUTH 3 N.YAHYA,E.SHEHU,R.TALBOT,L.PICKARD,B.R.BELLENIE,K.J.CHEUNG, JRNL AUTH 4 L.DROUIN,P.INNOCENTI,H.WOODWARD,O.A.DAVIS,M.G.LLOYD, JRNL AUTH 5 A.VARELA,R.HUCKVALE,F.BROCCATELLI,M.CARTER,D.GALIWANGO, JRNL AUTH 6 A.HAYES,F.I.RAYNAUD,C.BRYANT,S.WHITTAKER,O.W.ROSSANESE, JRNL AUTH 7 S.HOELDER,R.BURKE,R.L.M.VAN MONTFORT JRNL TITL DISCOVERING CELL-ACTIVE BCL6 INHIBITORS: EFFECTIVELY JRNL TITL 2 COMBINING BIOCHEMICAL HTS WITH MULTIPLE BIOPHYSICAL JRNL TITL 3 TECHNIQUES, X-RAY CRYSTALLOGRAPHY AND CELL-BASED ASSAYS. JRNL REF SCI REP V. 12 18633 2022 JRNL REFN ESSN 2045-2322 JRNL PMID 36329085 JRNL DOI 10.1038/S41598-022-23264-Z REMARK 2 REMARK 2 RESOLUTION. 1.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 46286 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870 REMARK 3 FREE R VALUE TEST SET COUNT : 2254 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 50 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.38 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.39 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.49 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 926 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2595 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 859 REMARK 3 BIN R VALUE (WORKING SET) : 0.2579 REMARK 3 BIN FREE R VALUE : 0.2807 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 7.24 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 67 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1019 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 47 REMARK 3 SOLVENT ATOMS : 167 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.13 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.10510 REMARK 3 B22 (A**2) : -1.10510 REMARK 3 B33 (A**2) : 2.21020 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.180 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.047 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.048 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.043 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.044 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.961 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1204 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 1644 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 427 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 249 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1204 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 158 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : 14 ; 1.000 ; HARMONIC REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 1620 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 0.98 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.57 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 13.45 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|5 - 27} REMARK 3 ORIGIN FOR THE GROUP (A): 62.5366 30.6808 12.3725 REMARK 3 T TENSOR REMARK 3 T11: -0.0193 T22: 0.0001 REMARK 3 T33: -0.0617 T12: -0.0210 REMARK 3 T13: 0.0020 T23: -0.0110 REMARK 3 L TENSOR REMARK 3 L11: 3.0866 L22: 1.0681 REMARK 3 L33: 4.6246 L12: 0.6553 REMARK 3 L13: 2.7112 L23: 1.1248 REMARK 3 S TENSOR REMARK 3 S11: 0.0396 S12: -0.0727 S13: -0.0497 REMARK 3 S21: 0.0970 S22: -0.0321 S23: 0.0310 REMARK 3 S31: 0.1682 S32: -0.2750 S33: -0.0074 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {A|28 - 40} REMARK 3 ORIGIN FOR THE GROUP (A): 74.8514 43.4412 27.7827 REMARK 3 T TENSOR REMARK 3 T11: 0.0609 T22: 0.0620 REMARK 3 T33: 0.0117 T12: -0.0092 REMARK 3 T13: -0.0145 T23: -0.0326 REMARK 3 L TENSOR REMARK 3 L11: 0.1205 L22: 1.3727 REMARK 3 L33: 0.3826 L12: 0.0734 REMARK 3 L13: 0.7716 L23: 0.0080 REMARK 3 S TENSOR REMARK 3 S11: 0.0510 S12: -0.0632 S13: 0.0152 REMARK 3 S21: 0.1461 S22: 0.1032 S23: -0.2719 REMARK 3 S31: -0.0480 S32: 0.2127 S33: -0.1541 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: {A|41 - 46} REMARK 3 ORIGIN FOR THE GROUP (A): 73.2964 42.5527 28.6384 REMARK 3 T TENSOR REMARK 3 T11: -0.0055 T22: -0.0366 REMARK 3 T33: -0.0954 T12: -0.0203 REMARK 3 T13: -0.0141 T23: -0.0278 REMARK 3 L TENSOR REMARK 3 L11: 1.6409 L22: 1.7230 REMARK 3 L33: 1.6935 L12: -0.6348 REMARK 3 L13: 2.2496 L23: 0.8282 REMARK 3 S TENSOR REMARK 3 S11: -0.0125 S12: -0.1622 S13: 0.0239 REMARK 3 S21: 0.3398 S22: 0.0691 S23: -0.1492 REMARK 3 S31: 0.0275 S32: 0.2259 S33: -0.0566 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: {A|47 - 68} REMARK 3 ORIGIN FOR THE GROUP (A): 67.8067 51.2489 17.9166 REMARK 3 T TENSOR REMARK 3 T11: 0.0664 T22: 0.0007 REMARK 3 T33: -0.0237 T12: -0.0180 REMARK 3 T13: 0.0180 T23: -0.0030 REMARK 3 L TENSOR REMARK 3 L11: 2.5515 L22: 2.9979 REMARK 3 L33: 2.4015 L12: 1.7727 REMARK 3 L13: -0.3733 L23: 1.1427 REMARK 3 S TENSOR REMARK 3 S11: 0.0195 S12: 0.0969 S13: 0.1028 REMARK 3 S21: -0.2416 S22: 0.0661 S23: -0.0035 REMARK 3 S31: -0.2604 S32: 0.0505 S33: -0.0856 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: {A|69 - 92} REMARK 3 ORIGIN FOR THE GROUP (A): 66.2533 45.3516 29.3008 REMARK 3 T TENSOR REMARK 3 T11: 0.0169 T22: -0.0276 REMARK 3 T33: -0.0669 T12: -0.0307 REMARK 3 T13: 0.0070 T23: -0.0148 REMARK 3 L TENSOR REMARK 3 L11: 0.7224 L22: 2.0613 REMARK 3 L33: 1.1177 L12: 0.4277 REMARK 3 L13: -0.3606 L23: 0.4321 REMARK 3 S TENSOR REMARK 3 S11: 0.1186 S12: -0.0865 S13: 0.0207 REMARK 3 S21: 0.2190 S22: -0.0517 S23: -0.0622 REMARK 3 S31: -0.0755 S32: -0.0172 S33: -0.0669 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: {A|93 - 101} REMARK 3 ORIGIN FOR THE GROUP (A): 55.7514 35.9506 32.7728 REMARK 3 T TENSOR REMARK 3 T11: 0.0228 T22: -0.0119 REMARK 3 T33: -0.0833 T12: -0.0641 REMARK 3 T13: 0.0303 T23: -0.0096 REMARK 3 L TENSOR REMARK 3 L11: 1.7432 L22: 1.8610 REMARK 3 L33: 1.5940 L12: 1.1924 REMARK 3 L13: -0.2776 L23: -1.7246 REMARK 3 S TENSOR REMARK 3 S11: 0.0645 S12: -0.1787 S13: -0.0851 REMARK 3 S21: 0.3573 S22: -0.1758 S23: 0.0812 REMARK 3 S31: 0.1548 S32: 0.1600 S33: 0.1113 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: {A|102 - 114} REMARK 3 ORIGIN FOR THE GROUP (A): 57.0491 48.1504 30.6236 REMARK 3 T TENSOR REMARK 3 T11: 0.0034 T22: -0.0228 REMARK 3 T33: -0.0301 T12: -0.0268 REMARK 3 T13: 0.0400 T23: -0.0327 REMARK 3 L TENSOR REMARK 3 L11: 2.4476 L22: 4.8919 REMARK 3 L33: 4.3686 L12: 2.3074 REMARK 3 L13: -1.4356 L23: -1.4596 REMARK 3 S TENSOR REMARK 3 S11: 0.1909 S12: -0.1555 S13: 0.1977 REMARK 3 S21: 0.2942 S22: -0.1718 S23: 0.1779 REMARK 3 S31: -0.1477 S32: -0.2092 S33: -0.0191 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: {A|115 - 129} REMARK 3 ORIGIN FOR THE GROUP (A): 47.2752 43.8030 30.5050 REMARK 3 T TENSOR REMARK 3 T11: -0.0014 T22: 0.0447 REMARK 3 T33: 0.0406 T12: -0.0470 REMARK 3 T13: 0.0505 T23: -0.0517 REMARK 3 L TENSOR REMARK 3 L11: 5.6158 L22: 6.8568 REMARK 3 L33: 0.1209 L12: 0.7286 REMARK 3 L13: -1.3842 L23: -0.2305 REMARK 3 S TENSOR REMARK 3 S11: -0.0980 S12: 0.1191 S13: 0.2461 REMARK 3 S21: 0.2778 S22: -0.0448 S23: 0.6622 REMARK 3 S31: 0.1636 S32: -0.3095 S33: 0.1428 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: {B|0 - 5} REMARK 3 ORIGIN FOR THE GROUP (A): 52.9461 26.8214 2.3856 REMARK 3 T TENSOR REMARK 3 T11: -0.0375 T22: 0.0734 REMARK 3 T33: -0.0340 T12: -0.0286 REMARK 3 T13: -0.0041 T23: -0.0328 REMARK 3 L TENSOR REMARK 3 L11: 7.0458 L22: -0.0906 REMARK 3 L33: 0.4916 L12: 1.9555 REMARK 3 L13: 0.8368 L23: 1.7181 REMARK 3 S TENSOR REMARK 3 S11: 0.1233 S12: -0.1035 S13: -0.1021 REMARK 3 S21: -0.0118 S22: -0.0637 S23: 0.1112 REMARK 3 S31: 0.0820 S32: -0.0063 S33: -0.0595 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ZWX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1292123022. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9660 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.27 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46419 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.380 REMARK 200 RESOLUTION RANGE LOW (A) : 47.590 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 18.90 REMARK 200 R MERGE (I) : 0.14800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 19.30 REMARK 200 R MERGE FOR SHELL (I) : 3.39000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3BIM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 MICROLITER OF THE BCL6-BTB/WVIP REMARK 280 COMPLEX AT 4 MG/ML PLUS 1 MICROLITER OF A CRYSTALLISATION REMARK 280 SOLUTION CONSISTING OF 1 M K2HPO4, 0.7 M NAH2PO4, 75 MM SODIUM REMARK 280 ACETATE BUFFER PH 4.5 AND 2 % DMSO, AGAINST 350 MICROLITER OF REMARK 280 CRYSTALLISATION SOLUTION., PH 7, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.04867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 110.09733 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 82.57300 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 137.62167 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 27.52433 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 55.04867 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 110.09733 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 137.62167 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 82.57300 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 27.52433 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 27.52433 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 2 REMARK 465 PRO A 3 REMARK 465 GLY A 4 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 6 CG OD1 OD2 REMARK 470 ARG A 28 NH2 REMARK 470 GLU A 41 OE2 REMARK 470 GLN A 64 CD OE1 NE2 REMARK 470 GLU A 115 CD OE1 OE2 REMARK 470 LYS A 123 CD CE NZ REMARK 470 LYS A 126 CD CE NZ REMARK 470 GLU A 129 O REMARK 470 ALA B 0 N CB REMARK 470 ALA B 5 CA C O CB REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 39 -121.23 62.63 REMARK 500 GLN A 113 60.43 60.28 REMARK 500 REMARK 500 REMARK: NULL DBREF 7ZWX A 5 129 UNP P41182 BCL6_HUMAN 5 129 DBREF 7ZWX B 0 5 PDB 7ZWX 7ZWX 0 5 SEQADV 7ZWX GLY A 2 UNP P41182 EXPRESSION TAG SEQADV 7ZWX PRO A 3 UNP P41182 EXPRESSION TAG SEQADV 7ZWX GLY A 4 UNP P41182 EXPRESSION TAG SEQRES 1 A 128 GLY PRO GLY ALA ASP SER CYS ILE GLN PHE THR ARG HIS SEQRES 2 A 128 ALA SER ASP VAL LEU LEU ASN LEU ASN ARG LEU ARG SER SEQRES 3 A 128 ARG ASP ILE LEU THR ASP VAL VAL ILE VAL VAL SER ARG SEQRES 4 A 128 GLU GLN PHE ARG ALA HIS LYS THR VAL LEU MET ALA CYS SEQRES 5 A 128 SER GLY LEU PHE TYR SER ILE PHE THR ASP GLN LEU LYS SEQRES 6 A 128 CYS ASN LEU SER VAL ILE ASN LEU ASP PRO GLU ILE ASN SEQRES 7 A 128 PRO GLU GLY PHE CYS ILE LEU LEU ASP PHE MET TYR THR SEQRES 8 A 128 SER ARG LEU ASN LEU ARG GLU GLY ASN ILE MET ALA VAL SEQRES 9 A 128 MET ALA THR ALA MET TYR LEU GLN MET GLU HIS VAL VAL SEQRES 10 A 128 ASP THR CYS ARG LYS PHE ILE LYS ALA SER GLU SEQRES 1 B 6 ALA TRP VAL ILE PRO ALA HET KA0 A 201 52 HET EDO A 202 4 HET EDO A 203 4 HET EDO A 204 4 HET EDO A 205 4 HET CL A 206 1 HET DMS A 207 4 HETNAM KA0 6-[1,3-BENZODIOXOL-5-YLMETHYL(METHYL)AMINO]-1-~{TERT}- HETNAM 2 KA0 BUTYL-5~{H}-PYRAZOLO[3,4-D]PYRIMIDIN-4-ONE HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETNAM DMS DIMETHYL SULFOXIDE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 KA0 C18 H21 N5 O3 FORMUL 4 EDO 4(C2 H6 O2) FORMUL 8 CL CL 1- FORMUL 9 DMS C2 H6 O S FORMUL 10 HOH *167(H2 O) HELIX 1 AA1 ARG A 13 ARG A 28 1 16 HELIX 2 AA2 HIS A 46 SER A 54 1 9 HELIX 3 AA3 SER A 54 THR A 62 1 9 HELIX 4 AA4 LEU A 65 LEU A 69 5 5 HELIX 5 AA5 ASN A 79 SER A 93 1 15 HELIX 6 AA6 ASN A 101 GLN A 113 1 13 HELIX 7 AA7 MET A 114 GLU A 129 1 16 SHEET 1 AA1 2 GLN A 10 PHE A 11 0 SHEET 2 AA1 2 TRP B 1 VAL B 2 -1 O VAL B 2 N GLN A 10 SHEET 1 AA2 3 GLU A 41 ALA A 45 0 SHEET 2 AA2 3 VAL A 34 VAL A 38 -1 N ILE A 36 O PHE A 43 SHEET 3 AA2 3 VAL A 71 ASN A 73 1 O ILE A 72 N VAL A 37 CRYST1 67.252 67.252 165.146 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014869 0.008585 0.000000 0.00000 SCALE2 0.000000 0.017170 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006055 0.00000