HEADER PROTON TRANSPORT 23-MAY-22 7ZY3 TITLE ROOM TEMPERATURE STRUCTURE OF ARCHAERHODOPSIN-3 OBTAINED 110 NS AFTER TITLE 2 PHOTOEXCITATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARCHAERHODOPSIN-3; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AR 3; COMPND 5 OTHER_DETAILS: THE PCA RESIDUE NEEDS TO BE IN POSITION 7 IN THE COMPND 6 PROTEIN CHAIN AS THE PCA IS A MODIFIED GLUTAMINE RESIDUE, SO GLN7 HAS COMPND 7 BECOME PCA. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HALORUBRUM SODOMENSE; SOURCE 3 ORGANISM_TAXID: 35743; SOURCE 4 VARIANT: RD-26; SOURCE 5 ATCC: 33755; SOURCE 6 TISSUE: MEMBRANE KEYWDS MEMBRANE PROTEIN, PROTON TRANPORT, RHODOPSIN, LIPIDIC CUBIC PHASE, KEYWDS 2 SFX, PROTON TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR T.O.C.KWAN,P.J.JUDGE,I.MORAES,A.WATTS,D.AXFORD,J.F.BADA JUAREZ REVDAT 3 07-FEB-24 7ZY3 1 REMARK REVDAT 2 31-JAN-24 7ZY3 1 JRNL REVDAT 1 14-JUN-23 7ZY3 0 JRNL AUTH J.BIRCH,T.O.C.KWAN,P.J.JUDGE,D.AXFORD,P.ALLER,A.BUTRYN, JRNL AUTH 2 R.I.REIS,J.F.BADA JUAREZ,J.VINALS,R.L.OWEN,E.NANGO,R.TANAKA, JRNL AUTH 3 K.TONO,Y.JOTI,T.TANAKA,S.OWADA,M.SUGAHARA,S.IWATA, JRNL AUTH 4 A.M.ORVILLE,A.WATTS,I.MORAES JRNL TITL A VERSATILE APPROACH TO HIGH-DENSITY MICROCRYSTALS IN JRNL TITL 2 LIPIDIC CUBIC PHASE FOR ROOM-TEMPERATURE SERIAL JRNL TITL 3 CRYSTALLOGRAPHY. JRNL REF J.APPL.CRYSTALLOGR. V. 56 1361 2023 JRNL REFN ISSN 0021-8898 JRNL PMID 37791355 JRNL DOI 10.1107/S1600576723006428 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 22397 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.182 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.820 REMARK 3 FREE R VALUE TEST SET COUNT : 1080 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.1400 - 3.5978 1.00 2823 144 0.1944 0.1691 REMARK 3 2 3.5978 - 2.8566 1.00 2704 126 0.1431 0.1709 REMARK 3 3 2.8566 - 2.4957 1.00 2654 140 0.1218 0.1661 REMARK 3 4 2.4957 - 2.2677 1.00 2667 116 0.1301 0.1545 REMARK 3 5 2.2677 - 2.1052 1.00 2585 175 0.1407 0.1858 REMARK 3 6 2.1052 - 1.9811 1.00 2647 129 0.1814 0.2463 REMARK 3 7 1.9811 - 1.8819 1.00 2635 110 0.2413 0.3188 REMARK 3 8 1.8819 - 1.8000 1.00 2602 140 0.2681 0.2922 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.970 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ZY3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-JUL-22. REMARK 100 THE DEPOSITION ID IS D_1292123190. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JAN-19 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : FREE ELECTRON LASER REMARK 200 BEAMLINE : BL2 REMARK 200 X-RAY GENERATOR MODEL : SACLA BEAMLINE BL2 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.23 REMARK 200 MONOCHROMATOR : M REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MPCCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : DIALS 1.10.1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26515 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 28.290 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 101.5 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.7900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 65.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.590 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER V3.24 REMARK 200 STARTING MODEL: 1AUZ REMARK 200 REMARK 200 REMARK: PLATES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 33% V/V POLYETHYLENE GLYCOL 600, 100 REMARK 280 MM MES BUFFER PH 5.5, 150 MM NACL AND 150 MM CACL2, LIPIDIC REMARK 280 CUBIC PHASE, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.10000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.35000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.15000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.35000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.10000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 24.15000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -47.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 245 REMARK 465 PRO A 246 REMARK 465 GLU A 247 REMARK 465 PRO A 248 REMARK 465 SER A 249 REMARK 465 ALA A 250 REMARK 465 GLY A 251 REMARK 465 ALA A 252 REMARK 465 ASP A 253 REMARK 465 VAL A 254 REMARK 465 SER A 255 REMARK 465 ALA A 256 REMARK 465 ALA A 257 REMARK 465 ASP A 258 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 40 CG CD NE CZ NH1 NH2 REMARK 470 TRP A 42 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 42 CZ3 CH2 REMARK 470 LYS A 47 CD CE NZ REMARK 470 GLU A 78 CD OE1 OE2 REMARK 470 GLU A 84 CG CD OE1 OE2 REMARK 470 ARG A 237 NE CZ NH1 NH2 REMARK 470 GLU A 244 CG CD OE1 OE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ILE A 88 CG1 CG2 CD1 REMARK 480 PHE A 161 CD1 CD2 CE1 CE2 CZ REMARK 480 LYS A 171 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ1 LYS A 226 C15 RET A 300 1.55 REMARK 500 NZ LYS A 226 C14 RET A 300 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 164 -76.95 -114.02 REMARK 500 LYS A 226 -63.60 -107.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 713 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 11 OD2 REMARK 620 2 ASP A 46 OD1 27.2 REMARK 620 3 ASP A 46 OD2 28.4 1.4 REMARK 620 4 ASP A 48 OD2 24.6 3.3 4.7 REMARK 620 5 LEU A 240 O 28.1 3.5 4.1 3.7 REMARK 620 6 HOH A 586 O 25.5 1.9 3.0 2.7 4.8 REMARK 620 7 HOH A 589 O 26.0 2.9 4.1 1.4 2.2 3.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 714 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 11 OD1 REMARK 620 2 ASP A 15 OD1 80.0 REMARK 620 3 ARG A 17 O 80.4 101.4 REMARK 620 4 THR A 20 OG1 122.7 141.8 59.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 715 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 242 OD1 REMARK 620 2 THR A 243 O 90.7 REMARK 620 3 HOH A 545 O 74.6 165.1 REMARK 620 4 HOH A 547 O 74.5 87.9 90.5 REMARK 620 5 HOH A 664 O 82.8 80.3 95.0 154.3 REMARK 620 6 HOH A 666 O 156.5 86.1 108.4 82.0 119.4 REMARK 620 N 1 2 3 4 5 DBREF 7ZY3 A 7 258 UNP P96787 BACR3_HALSD 7 258 SEQRES 1 A 252 PCA ALA GLY TYR ASP LEU LEU GLY ASP GLY ARG PRO GLU SEQRES 2 A 252 THR LEU TRP LEU GLY ILE GLY THR LEU LEU MET LEU ILE SEQRES 3 A 252 GLY THR PHE TYR PHE LEU VAL ARG GLY TRP GLY VAL THR SEQRES 4 A 252 ASP LYS ASP ALA ARG GLU TYR TYR ALA VAL THR ILE LEU SEQRES 5 A 252 VAL PRO GLY ILE ALA SER ALA ALA TYR LEU SER MET PHE SEQRES 6 A 252 PHE GLY ILE GLY LEU THR GLU VAL THR VAL GLY GLY GLU SEQRES 7 A 252 MET LEU ASP ILE TYR TYR ALA ARG TYR ALA ASP TRP LEU SEQRES 8 A 252 PHE THR THR PRO LEU LEU LEU LEU ASP LEU ALA LEU LEU SEQRES 9 A 252 ALA LYS VAL ASP ARG VAL THR ILE GLY THR LEU VAL GLY SEQRES 10 A 252 VAL ASP ALA LEU MET ILE VAL THR GLY LEU ILE GLY ALA SEQRES 11 A 252 LEU SER HIS THR ALA ILE ALA ARG TYR SER TRP TRP LEU SEQRES 12 A 252 PHE SER THR ILE CYS MET ILE VAL VAL LEU TYR PHE LEU SEQRES 13 A 252 ALA THR SER LEU ARG SER ALA ALA LYS GLU ARG GLY PRO SEQRES 14 A 252 GLU VAL ALA SER THR PHE ASN THR LEU THR ALA LEU VAL SEQRES 15 A 252 LEU VAL LEU TRP THR ALA TYR PRO ILE LEU TRP ILE ILE SEQRES 16 A 252 GLY THR GLU GLY ALA GLY VAL VAL GLY LEU GLY ILE GLU SEQRES 17 A 252 THR LEU LEU PHE MET VAL LEU ASP VAL THR ALA LYS VAL SEQRES 18 A 252 GLY PHE GLY PHE ILE LEU LEU ARG SER ARG ALA ILE LEU SEQRES 19 A 252 GLY ASP THR GLU ALA PRO GLU PRO SER ALA GLY ALA ASP SEQRES 20 A 252 VAL SER ALA ALA ASP MODRES 7ZY3 PCA A 7 GLN MODIFIED RESIDUE HET PCA A 7 13 HET RET A 300 96 HET DD9 A 301 29 HET R16 A 302 50 HET PLM A 303 49 HET PLM A 304 49 HET CA A 713 1 HET NA A 714 1 HET MG A 715 1 HET CL A 716 1 HET CL A 718 1 HET CL A 717 1 HETNAM PCA PYROGLUTAMIC ACID HETNAM RET RETINAL HETNAM DD9 NONANE HETNAM R16 HEXADECANE HETNAM PLM PALMITIC ACID HETNAM CA CALCIUM ION HETNAM NA SODIUM ION HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION FORMUL 1 PCA C5 H7 N O3 FORMUL 2 RET C20 H28 O FORMUL 3 DD9 C9 H20 FORMUL 4 R16 C16 H34 FORMUL 5 PLM 2(C16 H32 O2) FORMUL 7 CA CA 2+ FORMUL 8 NA NA 1+ FORMUL 9 MG MG 2+ FORMUL 10 CL 3(CL 1-) FORMUL 13 HOH *63(H2 O) HELIX 1 AA1 GLU A 19 GLY A 43 1 25 HELIX 2 AA2 ASP A 46 GLY A 73 1 28 HELIX 3 AA3 TYR A 90 LYS A 112 1 23 HELIX 4 AA4 ASP A 114 SER A 138 1 25 HELIX 5 AA5 THR A 140 THR A 164 1 25 HELIX 6 AA6 THR A 164 GLU A 172 1 9 HELIX 7 AA7 GLY A 174 GLY A 202 1 29 HELIX 8 AA8 GLY A 210 ARG A 235 1 26 HELIX 9 AA9 SER A 236 GLY A 241 5 6 SHEET 1 AA1 2 LEU A 76 VAL A 81 0 SHEET 2 AA1 2 GLU A 84 TYR A 89 -1 O ILE A 88 N THR A 77 LINK C PCA A 7 N ALA A 8 1555 1555 1.29 LINK NZ LYS A 226 C15ARET A 300 1555 1555 1.22 LINK NZ LYS A 226 C15BRET A 300 1555 1555 1.23 LINK OD2 ASP A 11 CA CA A 713 1555 2555 2.40 LINK OD1 ASP A 11 NA NA A 714 1555 1555 2.60 LINK OD1 ASP A 15 NA NA A 714 1555 1555 2.63 LINK O ARG A 17 NA NA A 714 1555 1555 3.19 LINK OG1 THR A 20 NA NA A 714 1555 1555 2.72 LINK OD1 ASP A 46 CA CA A 713 1555 1555 2.74 LINK OD2 ASP A 46 CA CA A 713 1555 1555 2.38 LINK OD2 ASP A 48 CA CA A 713 1555 1555 2.37 LINK O LEU A 240 CA CA A 713 1555 1555 2.34 LINK OD1 ASP A 242 MG MG A 715 1555 1555 2.28 LINK O THR A 243 MG MG A 715 1555 1555 2.33 LINK O HOH A 545 MG MG A 715 2554 1555 2.54 LINK O HOH A 547 MG MG A 715 1555 1555 2.72 LINK O HOH A 586 CA CA A 713 1555 1555 2.38 LINK O HOH A 589 CA CA A 713 2554 1555 2.47 LINK O HOH A 664 MG MG A 715 1555 1555 2.17 LINK O HOH A 666 MG MG A 715 1555 1555 1.91 CRYST1 46.200 48.300 104.700 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021645 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020704 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009551 0.00000 HETATM 1 N PCA A 7 5.073 -7.701 -6.590 1.00 44.95 N HETATM 2 CA PCA A 7 4.844 -8.023 -8.002 1.00 39.23 C HETATM 3 CB PCA A 7 4.707 -6.777 -8.862 1.00 34.70 C HETATM 4 CG PCA A 7 4.860 -5.582 -7.943 1.00 38.82 C HETATM 5 CD PCA A 7 5.076 -6.246 -6.583 1.00 49.42 C HETATM 6 OE PCA A 7 5.229 -5.580 -5.558 1.00 56.98 O HETATM 7 C PCA A 7 5.992 -8.892 -8.506 1.00 30.04 C HETATM 8 O PCA A 7 7.136 -8.799 -8.010 1.00 34.21 O HETATM 9 HA PCA A 7 3.987 -8.491 -8.088 1.00 47.08 H HETATM 10 HB2 PCA A 7 3.832 -6.773 -9.305 1.00 41.65 H HETATM 11 HB3 PCA A 7 5.397 -6.777 -9.559 1.00 41.65 H HETATM 12 HG2 PCA A 7 4.058 -5.019 -7.955 1.00 46.59 H HETATM 13 HG3 PCA A 7 5.622 -5.025 -8.206 1.00 46.59 H