HEADER TRANSFERASE 25-MAY-22 7ZYM TITLE CRYSTAL STRUCTURE OF EGFR-T790M/C797S IN COMPLEX WITH BRIGATINIB COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPIDERMAL GROWTH FACTOR RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTO-ONCOGENE C-ERBB-1,RECEPTOR TYROSINE-PROTEIN KINASE COMPND 5 ERBB-1; COMPND 6 EC: 2.7.10.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EGFR, ERBB, ERBB1, HER1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS EGFR, T790M/C797S, INHIBITOR, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.NIGGENABER,S.KLEINBOELTING,M.P.MUELLER,D.RAUH REVDAT 4 07-FEB-24 7ZYM 1 REMARK REVDAT 3 31-MAY-23 7ZYM 1 JRNL REVDAT 2 24-MAY-23 7ZYM 1 AUTHOR REVDAT 1 03-MAY-23 7ZYM 0 JRNL AUTH T.GRABE,K.JEYAKUMAR,J.NIGGENABER,T.SCHULZ,S.KOSKA, JRNL AUTH 2 S.KLEINBOLTING,M.E.BECK,M.P.MULLER,D.RAUH JRNL TITL ADDRESSING THE OSIMERTINIB RESISTANCE MUTATION JRNL TITL 2 EGFR-L858R/C797S WITH REVERSIBLE AMINOPYRIMIDINES. JRNL REF ACS MED.CHEM.LETT. V. 14 591 2023 JRNL REFN ISSN 1948-5875 JRNL PMID 37197473 JRNL DOI 10.1021/ACSMEDCHEMLETT.2C00514 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.18 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 18096 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 906 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.1800 - 4.5400 1.00 2959 156 0.1536 0.1921 REMARK 3 2 4.5400 - 3.6100 1.00 2864 151 0.1704 0.1935 REMARK 3 3 3.6100 - 3.1500 1.00 2857 151 0.2296 0.2450 REMARK 3 4 3.1500 - 2.8600 1.00 2820 148 0.2450 0.2779 REMARK 3 5 2.8600 - 2.6600 1.00 2841 150 0.2876 0.3288 REMARK 3 6 2.6600 - 2.5000 1.00 2849 150 0.2738 0.3062 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.308 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.222 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 62.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 70.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2587 REMARK 3 ANGLE : 0.561 3520 REMARK 3 CHIRALITY : 0.044 394 REMARK 3 PLANARITY : 0.005 442 REMARK 3 DIHEDRAL : 15.947 949 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 696 THROUGH 717 ) REMARK 3 ORIGIN FOR THE GROUP (A): -56.0262 9.4944 -34.0549 REMARK 3 T TENSOR REMARK 3 T11: 0.5636 T22: 0.5784 REMARK 3 T33: 0.5190 T12: -0.0482 REMARK 3 T13: 0.0528 T23: 0.0518 REMARK 3 L TENSOR REMARK 3 L11: 5.4175 L22: 1.2755 REMARK 3 L33: 5.6913 L12: 1.4106 REMARK 3 L13: 3.4747 L23: 1.1022 REMARK 3 S TENSOR REMARK 3 S11: 0.0891 S12: -0.0659 S13: -0.0298 REMARK 3 S21: -0.2065 S22: -0.0184 S23: -0.3011 REMARK 3 S31: -0.6788 S32: -0.3605 S33: -0.1042 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 718 THROUGH 752 ) REMARK 3 ORIGIN FOR THE GROUP (A): -51.6960 8.8065 -24.9160 REMARK 3 T TENSOR REMARK 3 T11: 0.5809 T22: 0.5873 REMARK 3 T33: 0.4983 T12: -0.1373 REMARK 3 T13: -0.0203 T23: 0.0410 REMARK 3 L TENSOR REMARK 3 L11: 7.8699 L22: 5.2546 REMARK 3 L33: 5.5164 L12: -0.6318 REMARK 3 L13: -0.7475 L23: 2.3244 REMARK 3 S TENSOR REMARK 3 S11: 0.1775 S12: -0.0255 S13: 0.4310 REMARK 3 S21: 0.2704 S22: 0.1549 S23: -0.9547 REMARK 3 S31: -0.1905 S32: 0.7300 S33: -0.3222 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 753 THROUGH 786 ) REMARK 3 ORIGIN FOR THE GROUP (A): -54.9378 1.7802 -34.7395 REMARK 3 T TENSOR REMARK 3 T11: 0.6124 T22: 0.6475 REMARK 3 T33: 0.5489 T12: -0.0277 REMARK 3 T13: 0.0017 T23: 0.0838 REMARK 3 L TENSOR REMARK 3 L11: 3.8292 L22: 5.9054 REMARK 3 L33: 4.3731 L12: 2.5391 REMARK 3 L13: -1.1934 L23: -0.9313 REMARK 3 S TENSOR REMARK 3 S11: 0.2598 S12: -0.0291 S13: -0.3887 REMARK 3 S21: 0.1279 S22: -0.1946 S23: -0.6021 REMARK 3 S31: -0.2006 S32: 0.5737 S33: -0.1969 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 787 THROUGH 810 ) REMARK 3 ORIGIN FOR THE GROUP (A): -56.4474 -3.4925 -14.9746 REMARK 3 T TENSOR REMARK 3 T11: 0.7418 T22: 0.6088 REMARK 3 T33: 0.4255 T12: -0.1719 REMARK 3 T13: -0.1273 T23: 0.0447 REMARK 3 L TENSOR REMARK 3 L11: 2.8747 L22: 6.2666 REMARK 3 L33: 2.1210 L12: 1.3036 REMARK 3 L13: -1.4779 L23: -2.2362 REMARK 3 S TENSOR REMARK 3 S11: 0.3881 S12: -0.3459 S13: -0.0509 REMARK 3 S21: 1.1424 S22: -0.4784 S23: -0.4456 REMARK 3 S31: -0.3756 S32: 0.3839 S33: 0.1056 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 811 THROUGH 853 ) REMARK 3 ORIGIN FOR THE GROUP (A): -64.1864 -8.7151 -23.4320 REMARK 3 T TENSOR REMARK 3 T11: 0.4429 T22: 0.3732 REMARK 3 T33: 0.3249 T12: -0.0136 REMARK 3 T13: -0.0301 T23: 0.0228 REMARK 3 L TENSOR REMARK 3 L11: 3.6394 L22: 4.9578 REMARK 3 L33: 2.4042 L12: 1.2016 REMARK 3 L13: -1.0613 L23: -1.3557 REMARK 3 S TENSOR REMARK 3 S11: 0.0589 S12: 0.0678 S13: 0.0076 REMARK 3 S21: 0.1016 S22: -0.1799 S23: -0.1812 REMARK 3 S31: -0.1166 S32: 0.1673 S33: 0.0167 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 854 THROUGH 873 ) REMARK 3 ORIGIN FOR THE GROUP (A): -57.0298 -12.9892 -39.1484 REMARK 3 T TENSOR REMARK 3 T11: 0.7866 T22: 0.7841 REMARK 3 T33: 0.6409 T12: -0.0068 REMARK 3 T13: 0.0494 T23: 0.0764 REMARK 3 L TENSOR REMARK 3 L11: 7.6099 L22: 3.6352 REMARK 3 L33: 8.9218 L12: 3.1596 REMARK 3 L13: 4.1504 L23: 5.3319 REMARK 3 S TENSOR REMARK 3 S11: -0.3497 S12: 0.3959 S13: -0.3973 REMARK 3 S21: -0.5702 S22: 0.1687 S23: -0.3242 REMARK 3 S31: -0.3119 S32: 0.4021 S33: 0.3442 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 874 THROUGH 960 ) REMARK 3 ORIGIN FOR THE GROUP (A): -57.8119 -23.8559 -23.8393 REMARK 3 T TENSOR REMARK 3 T11: 0.4612 T22: 0.4296 REMARK 3 T33: 0.4771 T12: 0.0122 REMARK 3 T13: 0.0536 T23: 0.0927 REMARK 3 L TENSOR REMARK 3 L11: 2.9655 L22: 4.8456 REMARK 3 L33: 5.3925 L12: -0.1178 REMARK 3 L13: -1.5139 L23: -0.8842 REMARK 3 S TENSOR REMARK 3 S11: -0.1562 S12: 0.1003 S13: -0.2544 REMARK 3 S21: -0.4048 S22: -0.2798 S23: -0.6825 REMARK 3 S31: 0.3265 S32: 0.5295 S33: 0.3543 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 961 THROUGH 986 ) REMARK 3 ORIGIN FOR THE GROUP (A): -72.7896 -17.1080 -13.6847 REMARK 3 T TENSOR REMARK 3 T11: 0.6157 T22: 0.3003 REMARK 3 T33: 0.3187 T12: -0.0645 REMARK 3 T13: 0.0235 T23: -0.0476 REMARK 3 L TENSOR REMARK 3 L11: 8.7494 L22: 5.8903 REMARK 3 L33: 0.5341 L12: 0.2127 REMARK 3 L13: 0.6141 L23: -1.7619 REMARK 3 S TENSOR REMARK 3 S11: -0.2033 S12: -0.4976 S13: 0.1829 REMARK 3 S21: 0.6347 S22: 0.0741 S23: 0.3380 REMARK 3 S31: -0.8481 S32: -0.9168 S33: 0.2294 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 987 THROUGH 1002 ) REMARK 3 ORIGIN FOR THE GROUP (A): -60.5132 5.8764 -8.5918 REMARK 3 T TENSOR REMARK 3 T11: 1.2966 T22: 1.2978 REMARK 3 T33: 0.8914 T12: -0.0829 REMARK 3 T13: -0.1421 T23: 0.1026 REMARK 3 L TENSOR REMARK 3 L11: 3.7452 L22: 9.3749 REMARK 3 L33: 0.7170 L12: -1.1421 REMARK 3 L13: 0.6715 L23: 2.2052 REMARK 3 S TENSOR REMARK 3 S11: -0.3684 S12: -0.6255 S13: 0.2150 REMARK 3 S21: 1.9199 S22: 0.3453 S23: 0.8393 REMARK 3 S31: -1.0886 S32: 0.0438 S33: 0.3501 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1003 THROUGH 1020 ) REMARK 3 ORIGIN FOR THE GROUP (A): -61.8207 14.8909 -20.8268 REMARK 3 T TENSOR REMARK 3 T11: 0.8581 T22: 0.6605 REMARK 3 T33: 0.6614 T12: -0.1294 REMARK 3 T13: -0.0504 T23: 0.0372 REMARK 3 L TENSOR REMARK 3 L11: 9.3582 L22: 5.9581 REMARK 3 L33: 4.4288 L12: -0.1337 REMARK 3 L13: -4.2310 L23: 0.9762 REMARK 3 S TENSOR REMARK 3 S11: 0.5158 S12: -0.4346 S13: 0.1431 REMARK 3 S21: 0.6034 S22: -0.0198 S23: -0.8321 REMARK 3 S31: -0.3777 S32: 0.2474 S33: -0.2812 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ZYM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1292123322. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9150 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18104 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 42.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 19.66 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 19.47 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6S89 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.4 K-NA-TARTRATE, 100 MM NA-MES (PH REMARK 280 6.5), 3.5 MG/ML EGFR-WT (IN 100 MM NACL, 25 MM TRIS-HCL, 10 % REMARK 280 GLYCEROL, 1 MM TCEP) PH 8.0) 1 UL RESERVOIR + 1 UL SOLUTION, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 73.05000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 73.05000 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 73.05000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 73.05000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 73.05000 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 73.05000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 73.05000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 73.05000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 73.05000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 73.05000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 73.05000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 73.05000 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 73.05000 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 73.05000 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 73.05000 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 73.05000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 73.05000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 73.05000 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 73.05000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 73.05000 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 73.05000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 73.05000 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 73.05000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 73.05000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 73.05000 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 73.05000 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 73.05000 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 73.05000 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 73.05000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 73.05000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 73.05000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 73.05000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 73.05000 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 73.05000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 73.05000 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 73.05000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 690 REMARK 465 SER A 691 REMARK 465 HIS A 692 REMARK 465 MET A 693 REMARK 465 ALA A 694 REMARK 465 SER A 695 REMARK 465 ARG A 748 REMARK 465 GLU A 749 REMARK 465 ALA A 750 REMARK 465 THR A 751 REMARK 465 GLN A 1021 REMARK 465 GLY A 1022 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 697 CG CD OE1 OE2 REMARK 470 LYS A 713 CG CD CE NZ REMARK 470 LYS A 716 CG CD CE NZ REMARK 470 GLU A 734 CG CD OE1 OE2 REMARK 470 LYS A 754 CG CD CE NZ REMARK 470 LYS A 806 CG CD CE NZ REMARK 470 GLU A 872 CG CD OE1 OE2 REMARK 470 LYS A 875 CG CD CE NZ REMARK 470 LYS A 929 CG CD CE NZ REMARK 470 GLN A 982 CG CD OE1 NE2 REMARK 470 GLU A 985 CG CD OE1 OE2 REMARK 470 ARG A 986 CG CD NE CZ NH1 NH2 REMARK 470 SER A 991 OG REMARK 470 THR A 993 OG1 CG2 REMARK 470 ASP A 994 CG OD1 OD2 REMARK 470 ASN A 996 CG OD1 ND2 REMARK 470 ARG A 999 CG CD NE CZ NH1 NH2 REMARK 470 GLU A1005 CG CD OE1 OE2 REMARK 470 GLN A1020 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 837 34.75 -149.00 REMARK 500 ASP A 855 83.12 53.24 REMARK 500 REMARK 500 REMARK: NULL DBREF 7ZYM A 695 1022 UNP P00533 EGFR_HUMAN 695 1022 SEQADV 7ZYM GLY A 690 UNP P00533 EXPRESSION TAG SEQADV 7ZYM SER A 691 UNP P00533 EXPRESSION TAG SEQADV 7ZYM HIS A 692 UNP P00533 EXPRESSION TAG SEQADV 7ZYM MET A 693 UNP P00533 EXPRESSION TAG SEQADV 7ZYM ALA A 694 UNP P00533 EXPRESSION TAG SEQADV 7ZYM MET A 790 UNP P00533 THR 790 ENGINEERED MUTATION SEQADV 7ZYM SER A 797 UNP P00533 CYS 797 ENGINEERED MUTATION SEQADV 7ZYM ALA A 865 UNP P00533 GLU 865 ENGINEERED MUTATION SEQADV 7ZYM ALA A 866 UNP P00533 GLU 866 ENGINEERED MUTATION SEQADV 7ZYM ALA A 867 UNP P00533 LYS 867 ENGINEERED MUTATION SEQRES 1 A 333 GLY SER HIS MET ALA SER GLY GLU ALA PRO ASN GLN ALA SEQRES 2 A 333 LEU LEU ARG ILE LEU LYS GLU THR GLU PHE LYS LYS ILE SEQRES 3 A 333 LYS VAL LEU GLY SER GLY ALA PHE GLY THR VAL TYR LYS SEQRES 4 A 333 GLY LEU TRP ILE PRO GLU GLY GLU LYS VAL LYS ILE PRO SEQRES 5 A 333 VAL ALA ILE LYS GLU LEU ARG GLU ALA THR SER PRO LYS SEQRES 6 A 333 ALA ASN LYS GLU ILE LEU ASP GLU ALA TYR VAL MET ALA SEQRES 7 A 333 SER VAL ASP ASN PRO HIS VAL CYS ARG LEU LEU GLY ILE SEQRES 8 A 333 CYS LEU THR SER THR VAL GLN LEU ILE MET GLN LEU MET SEQRES 9 A 333 PRO PHE GLY SER LEU LEU ASP TYR VAL ARG GLU HIS LYS SEQRES 10 A 333 ASP ASN ILE GLY SER GLN TYR LEU LEU ASN TRP CYS VAL SEQRES 11 A 333 GLN ILE ALA LYS GLY MET ASN TYR LEU GLU ASP ARG ARG SEQRES 12 A 333 LEU VAL HIS ARG ASP LEU ALA ALA ARG ASN VAL LEU VAL SEQRES 13 A 333 LYS THR PRO GLN HIS VAL LYS ILE THR ASP PHE GLY LEU SEQRES 14 A 333 ALA LYS LEU LEU GLY ALA ALA ALA ALA GLU TYR HIS ALA SEQRES 15 A 333 GLU GLY GLY LYS VAL PRO ILE LYS TRP MET ALA LEU GLU SEQRES 16 A 333 SER ILE LEU HIS ARG ILE TYR THR HIS GLN SER ASP VAL SEQRES 17 A 333 TRP SER TYR GLY VAL THR VAL TRP GLU LEU MET THR PHE SEQRES 18 A 333 GLY SER LYS PRO TYR ASP GLY ILE PRO ALA SER GLU ILE SEQRES 19 A 333 SER SER ILE LEU GLU LYS GLY GLU ARG LEU PRO GLN PRO SEQRES 20 A 333 PRO ILE CYS THR ILE ASP VAL TYR MET ILE MET VAL LYS SEQRES 21 A 333 CYS TRP MET ILE ASP ALA ASP SER ARG PRO LYS PHE ARG SEQRES 22 A 333 GLU LEU ILE ILE GLU PHE SER LYS MET ALA ARG ASP PRO SEQRES 23 A 333 GLN ARG TYR LEU VAL ILE GLN GLY ASP GLU ARG MET HIS SEQRES 24 A 333 LEU PRO SER PRO THR ASP SER ASN PHE TYR ARG ALA LEU SEQRES 25 A 333 MET ASP GLU GLU ASP MET ASP ASP VAL VAL ASP ALA ASP SEQRES 26 A 333 GLU TYR LEU ILE PRO GLN GLN GLY HET 6GY A1101 40 HETNAM 6GY 5-CHLORO-N~4~-[2-(DIMETHYLPHOSPHORYL)PHENYL]-N~2~-{2- HETNAM 2 6GY METHOXY-4-[4-(4-METHYLPIPERAZIN-1-YL)PIPERIDIN-1- HETNAM 3 6GY YL]PHENYL}PYRIMIDINE-2,4-DIAMINE HETSYN 6GY BRIGATINIB FORMUL 2 6GY C29 H39 CL N7 O2 P FORMUL 3 HOH *22(H2 O) HELIX 1 AA1 LYS A 708 THR A 710 5 3 HELIX 2 AA2 PRO A 753 SER A 768 1 16 HELIX 3 AA3 SER A 797 HIS A 805 1 9 HELIX 4 AA4 LYS A 806 ILE A 809 5 4 HELIX 5 AA5 GLY A 810 ARG A 831 1 22 HELIX 6 AA6 ALA A 839 ARG A 841 5 3 HELIX 7 AA7 PRO A 877 MET A 881 5 5 HELIX 8 AA8 ALA A 882 ARG A 889 1 8 HELIX 9 AA9 THR A 892 THR A 909 1 18 HELIX 10 AB1 PRO A 919 SER A 921 5 3 HELIX 11 AB2 GLU A 922 LYS A 929 1 8 HELIX 12 AB3 THR A 940 TRP A 951 1 12 HELIX 13 AB4 ASP A 954 ARG A 958 5 5 HELIX 14 AB5 LYS A 960 ALA A 972 1 13 HELIX 15 AB6 ARG A 973 TYR A 978 5 6 HELIX 16 AB7 GLY A 983 MET A 987 5 5 HELIX 17 AB8 ASP A 994 ASP A 1003 1 10 HELIX 18 AB9 ASP A 1012 TYR A 1016 5 5 SHEET 1 AA1 5 PHE A 712 GLY A 721 0 SHEET 2 AA1 5 GLY A 724 TRP A 731 -1 O VAL A 726 N LEU A 718 SHEET 3 AA1 5 ILE A 740 GLU A 746 -1 O ILE A 740 N TRP A 731 SHEET 4 AA1 5 GLN A 787 GLN A 791 -1 O MET A 790 N ALA A 743 SHEET 5 AA1 5 LEU A 777 CYS A 781 -1 N GLY A 779 O ILE A 789 SHEET 1 AA2 2 LEU A 833 VAL A 834 0 SHEET 2 AA2 2 LYS A 860 LEU A 861 -1 O LYS A 860 N VAL A 834 SHEET 1 AA3 2 VAL A 843 THR A 847 0 SHEET 2 AA3 2 HIS A 850 ILE A 853 -1 O LYS A 852 N LEU A 844 SHEET 1 AA4 2 TYR A 869 HIS A 870 0 SHEET 2 AA4 2 ILE A 890 TYR A 891 -1 O TYR A 891 N TYR A 869 CRYST1 146.100 146.100 146.100 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006845 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006845 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006845 0.00000