HEADER TRANSFERASE 25-MAY-22 7ZYQ TITLE CRYSTAL STRUCTURE OF EGFR-T790M/V948R IN COMPLEX WITH REVERSIBLE TITLE 2 AMINOPYRIMIDINE 13 COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPIDERMAL GROWTH FACTOR RECEPTOR; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PROTO-ONCOGENE C-ERBB-1,RECEPTOR TYROSINE-PROTEIN KINASE COMPND 5 ERBB-1; COMPND 6 EC: 2.7.10.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EGFR, ERBB, ERBB1, HER1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS EGFR, T790M/V948R, INHIBITOR, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.NIGGENABER,M.P.MUELLER,D.RAUH REVDAT 3 07-FEB-24 7ZYQ 1 REMARK REVDAT 2 31-MAY-23 7ZYQ 1 JRNL REVDAT 1 03-MAY-23 7ZYQ 0 JRNL AUTH T.GRABE,K.JEYAKUMAR,J.NIGGENABER,T.SCHULZ,S.KOSKA, JRNL AUTH 2 S.KLEINBOLTING,M.E.BECK,M.P.MULLER,D.RAUH JRNL TITL ADDRESSING THE OSIMERTINIB RESISTANCE MUTATION JRNL TITL 2 EGFR-L858R/C797S WITH REVERSIBLE AMINOPYRIMIDINES. JRNL REF ACS MED.CHEM.LETT. V. 14 591 2023 JRNL REFN ISSN 1948-5875 JRNL PMID 37197473 JRNL DOI 10.1021/ACSMEDCHEMLETT.2C00514 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 32294 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1615 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.8200 - 4.8100 1.00 2735 144 0.1947 0.2160 REMARK 3 2 4.8100 - 3.8200 1.00 2595 137 0.1577 0.1736 REMARK 3 3 3.8200 - 3.3300 1.00 2576 136 0.1800 0.2100 REMARK 3 4 3.3300 - 3.0300 1.00 2570 135 0.2063 0.2179 REMARK 3 5 3.0300 - 2.8100 1.00 2538 133 0.2332 0.2499 REMARK 3 6 2.8100 - 2.6500 1.00 2543 134 0.2224 0.2601 REMARK 3 7 2.6500 - 2.5100 1.00 2535 134 0.2222 0.3213 REMARK 3 8 2.5100 - 2.4000 1.00 2523 133 0.2328 0.2661 REMARK 3 9 2.4000 - 2.3100 1.00 2522 132 0.2228 0.2756 REMARK 3 10 2.3100 - 2.2300 1.00 2506 132 0.2347 0.2128 REMARK 3 11 2.2300 - 2.1600 1.00 2536 134 0.2395 0.2573 REMARK 3 12 2.1600 - 2.1000 1.00 2500 131 0.2657 0.3184 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.270 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 700 THROUGH 853 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.8430 -5.8555 -3.7992 REMARK 3 T TENSOR REMARK 3 T11: 0.2659 T22: 0.2963 REMARK 3 T33: 0.3434 T12: -0.0035 REMARK 3 T13: -0.0129 T23: 0.0116 REMARK 3 L TENSOR REMARK 3 L11: 1.9815 L22: 1.5213 REMARK 3 L33: 2.9858 L12: -0.0755 REMARK 3 L13: -0.3087 L23: 0.1690 REMARK 3 S TENSOR REMARK 3 S11: 0.0065 S12: -0.2522 S13: 0.0410 REMARK 3 S21: 0.1382 S22: -0.0090 S23: -0.0695 REMARK 3 S31: -0.0083 S32: -0.0040 S33: 0.0183 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 854 THROUGH 984 ) REMARK 3 ORIGIN FOR THE GROUP (A): 53.5048 -6.1703 -22.8076 REMARK 3 T TENSOR REMARK 3 T11: 0.3120 T22: 0.2893 REMARK 3 T33: 0.3177 T12: 0.0103 REMARK 3 T13: 0.0604 T23: 0.0409 REMARK 3 L TENSOR REMARK 3 L11: 3.7699 L22: 3.6265 REMARK 3 L33: 2.5750 L12: 0.2665 REMARK 3 L13: 0.3371 L23: 0.4816 REMARK 3 S TENSOR REMARK 3 S11: -0.0488 S12: 0.1315 S13: -0.0710 REMARK 3 S21: -0.2582 S22: 0.0335 S23: -0.3245 REMARK 3 S31: -0.0962 S32: 0.2097 S33: 0.0225 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 700 THROUGH 853 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.7351 -9.9786 -10.1794 REMARK 3 T TENSOR REMARK 3 T11: 0.3600 T22: 0.3515 REMARK 3 T33: 0.3341 T12: -0.0449 REMARK 3 T13: -0.0263 T23: 0.0289 REMARK 3 L TENSOR REMARK 3 L11: 2.6887 L22: 4.2385 REMARK 3 L33: 1.5231 L12: 0.2513 REMARK 3 L13: -0.4076 L23: -0.2950 REMARK 3 S TENSOR REMARK 3 S11: -0.1288 S12: 0.0888 S13: -0.4261 REMARK 3 S21: -0.4629 S22: 0.1865 S23: -0.0503 REMARK 3 S31: 0.2404 S32: -0.1124 S33: -0.0230 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 854 THROUGH 984 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.2090 9.9792 -8.5332 REMARK 3 T TENSOR REMARK 3 T11: 0.3328 T22: 0.4314 REMARK 3 T33: 0.4112 T12: 0.0245 REMARK 3 T13: -0.0654 T23: 0.0944 REMARK 3 L TENSOR REMARK 3 L11: 5.2386 L22: 2.7458 REMARK 3 L33: 2.9192 L12: 1.2819 REMARK 3 L13: 0.8580 L23: -0.4595 REMARK 3 S TENSOR REMARK 3 S11: -0.3571 S12: -0.0202 S13: 0.4489 REMARK 3 S21: -0.3470 S22: 0.3452 S23: 0.5655 REMARK 3 S31: -0.1503 S32: -0.5948 S33: 0.0416 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 700 OR (RESID 701 REMARK 3 THROUGH 702 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 703 THROUGH 707 OR (RESID 708 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 709 THROUGH 715 OR (RESID 716 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 717 THROUGH 722 REMARK 3 OR (RESID 723 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 724 THROUGH 734 OR RESID 737 THROUGH 747 REMARK 3 OR (RESID 748 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 753 THROUGH 758 OR (RESID 759 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 760 THROUGH 768 OR RESID 770 REMARK 3 THROUGH 777 OR RESID 779 THROUGH 783 OR REMARK 3 (RESID 784 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 785 REMARK 3 THROUGH 807 OR (RESID 808 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 809 THROUGH 835 OR (RESID 836 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 837 THROUGH 856 REMARK 3 OR RESID 876 THROUGH 925 OR (RESID 926 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 927 THROUGH 984 REMARK 3 OR RESID 1001)) REMARK 3 SELECTION : (CHAIN B AND (RESID 700 THROUGH 761 OR REMARK 3 (RESID 762 THROUGH 763 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 764 THROUGH 768 OR RESID 770 REMARK 3 THROUGH 777 OR RESID 779 THROUGH 831 OR REMARK 3 (RESID 832 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 833 REMARK 3 THROUGH 921 OR (RESID 922 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 923 THROUGH 961 OR (RESID 962 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 963 THROUGH 969 REMARK 3 OR (RESID 970 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 971 THROUGH 981 OR (RESID 982 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 983 THROUGH 984 OR RESID 1001) REMARK 3 ) REMARK 3 ATOM PAIRS NUMBER : 2396 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ZYQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1292123328. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-FEB-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32296 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 46.820 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.730 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.9200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.66 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.750 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6S89 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 27.5 % PEG3350, 100 MM MGSO4, 2 % REMARK 280 ETHYLEN GLYCOLE, 6.4 MG/ML EGFR-T790M/V948R (IN 100 MM NACL, 25 REMARK 280 MM TRIS-HCL, 10 % GLYCEROL, 1 MM TCEP, PH 8.0) 1 UL RESERVOIR + REMARK 280 1 UL PROTEIN SOLUTION), VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.94500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.78500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.79500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.78500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.94500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.79500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 690 REMARK 465 SER A 691 REMARK 465 HIS A 692 REMARK 465 MET A 693 REMARK 465 ALA A 694 REMARK 465 SER A 695 REMARK 465 GLY A 696 REMARK 465 GLU A 697 REMARK 465 ALA A 698 REMARK 465 PRO A 699 REMARK 465 LEU A 861 REMARK 465 LEU A 862 REMARK 465 GLY A 863 REMARK 465 ALA A 864 REMARK 465 GLU A 865 REMARK 465 GLU A 866 REMARK 465 LYS A 867 REMARK 465 GLU A 868 REMARK 465 TYR A 869 REMARK 465 HIS A 870 REMARK 465 ALA A 871 REMARK 465 GLU A 872 REMARK 465 GLY A 873 REMARK 465 GLY A 874 REMARK 465 LYS A 875 REMARK 465 GLU A 985 REMARK 465 ARG A 986 REMARK 465 MET A 987 REMARK 465 HIS A 988 REMARK 465 LEU A 989 REMARK 465 PRO A 990 REMARK 465 SER A 991 REMARK 465 PRO A 992 REMARK 465 THR A 993 REMARK 465 ASP A 994 REMARK 465 SER A 995 REMARK 465 ASN A 996 REMARK 465 PHE A 997 REMARK 465 TYR A 998 REMARK 465 ARG A 999 REMARK 465 ALA A 1000 REMARK 465 LEU A 1001 REMARK 465 MET A 1002 REMARK 465 ASP A 1003 REMARK 465 GLU A 1004 REMARK 465 GLU A 1005 REMARK 465 ASP A 1006 REMARK 465 MET A 1007 REMARK 465 ASP A 1008 REMARK 465 ASP A 1009 REMARK 465 VAL A 1010 REMARK 465 VAL A 1011 REMARK 465 ASP A 1012 REMARK 465 ALA A 1013 REMARK 465 ASP A 1014 REMARK 465 GLU A 1015 REMARK 465 TYR A 1016 REMARK 465 LEU A 1017 REMARK 465 ILE A 1018 REMARK 465 PRO A 1019 REMARK 465 GLN A 1020 REMARK 465 GLN A 1021 REMARK 465 GLY A 1022 REMARK 465 GLY B 690 REMARK 465 SER B 691 REMARK 465 HIS B 692 REMARK 465 MET B 693 REMARK 465 ALA B 694 REMARK 465 SER B 695 REMARK 465 GLY B 696 REMARK 465 GLU B 697 REMARK 465 ALA B 698 REMARK 465 PRO B 699 REMARK 465 GLU B 734 REMARK 465 GLY B 735 REMARK 465 GLU B 749 REMARK 465 ALA B 750 REMARK 465 THR B 751 REMARK 465 SER B 752 REMARK 465 GLY B 857 REMARK 465 LEU B 858 REMARK 465 ALA B 859 REMARK 465 LYS B 860 REMARK 465 LEU B 861 REMARK 465 LEU B 862 REMARK 465 GLY B 863 REMARK 465 ALA B 864 REMARK 465 GLU B 865 REMARK 465 GLU B 866 REMARK 465 LYS B 867 REMARK 465 GLU B 868 REMARK 465 TYR B 869 REMARK 465 HIS B 870 REMARK 465 ALA B 871 REMARK 465 GLU B 872 REMARK 465 GLY B 873 REMARK 465 GLY B 874 REMARK 465 LYS B 875 REMARK 465 GLU B 985 REMARK 465 ARG B 986 REMARK 465 MET B 987 REMARK 465 HIS B 988 REMARK 465 LEU B 989 REMARK 465 PRO B 990 REMARK 465 SER B 991 REMARK 465 PRO B 992 REMARK 465 THR B 993 REMARK 465 ASP B 994 REMARK 465 SER B 995 REMARK 465 ASN B 996 REMARK 465 PHE B 997 REMARK 465 TYR B 998 REMARK 465 ARG B 999 REMARK 465 ALA B 1000 REMARK 465 LEU B 1001 REMARK 465 MET B 1002 REMARK 465 ASP B 1003 REMARK 465 GLU B 1004 REMARK 465 GLU B 1005 REMARK 465 ASP B 1006 REMARK 465 MET B 1007 REMARK 465 ASP B 1008 REMARK 465 ASP B 1009 REMARK 465 VAL B 1010 REMARK 465 VAL B 1011 REMARK 465 ASP B 1012 REMARK 465 ALA B 1013 REMARK 465 ASP B 1014 REMARK 465 GLU B 1015 REMARK 465 TYR B 1016 REMARK 465 LEU B 1017 REMARK 465 ILE B 1018 REMARK 465 PRO B 1019 REMARK 465 GLN B 1020 REMARK 465 GLN B 1021 REMARK 465 GLY B 1022 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 713 CG CD CE NZ REMARK 470 GLU A 734 CG CD OE1 OE2 REMARK 470 LYS A 737 CG CD CE NZ REMARK 470 LYS A 739 CG CD CE NZ REMARK 470 SER A 752 OG REMARK 470 LYS A 754 CG CD CE NZ REMARK 470 LYS A 757 CG CD CE NZ REMARK 470 GLU A 758 CG CD OE1 OE2 REMARK 470 GLU A 762 CG CD OE1 OE2 REMARK 470 GLU A 804 CG CD OE1 OE2 REMARK 470 ARG A 832 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 858 CG CD1 CD2 REMARK 470 LYS A 860 CG CD CE NZ REMARK 470 GLU A 922 CG CD OE1 OE2 REMARK 470 LYS A 929 CG CD CE NZ REMARK 470 ARG A 962 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 970 CG CD CE NZ REMARK 470 GLN A 982 CG CD OE1 NE2 REMARK 470 GLN B 701 CG CD OE1 NE2 REMARK 470 LYS B 708 CG CD CE NZ REMARK 470 LYS B 713 CG CD CE NZ REMARK 470 LYS B 716 CG CD CE NZ REMARK 470 PHE B 723 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 736 CG CD OE1 OE2 REMARK 470 LYS B 737 CG CD CE NZ REMARK 470 LYS B 739 CG CD CE NZ REMARK 470 ARG B 748 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 754 CG CD CE NZ REMARK 470 LYS B 757 CG CD CE NZ REMARK 470 GLU B 758 CG CD OE1 OE2 REMARK 470 ILE B 759 CG1 CG2 CD1 REMARK 470 SER B 784 OG REMARK 470 GLU B 804 CG CD OE1 OE2 REMARK 470 ASN B 808 CG OD1 ND2 REMARK 470 ARG B 836 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 926 CG1 CG2 CD1 REMARK 470 LYS B 929 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 783 -152.42 -110.85 REMARK 500 ARG A 836 -14.09 81.44 REMARK 500 ASP A 837 46.95 -141.54 REMARK 500 THR B 783 -156.51 -110.93 REMARK 500 ARG B 836 -12.90 80.29 REMARK 500 ASP B 837 46.94 -140.52 REMARK 500 REMARK 500 REMARK: NULL DBREF 7ZYQ A 695 1022 UNP P00533 EGFR_HUMAN 695 1022 DBREF 7ZYQ B 695 1022 UNP P00533 EGFR_HUMAN 695 1022 SEQADV 7ZYQ GLY A 690 UNP P00533 EXPRESSION TAG SEQADV 7ZYQ SER A 691 UNP P00533 EXPRESSION TAG SEQADV 7ZYQ HIS A 692 UNP P00533 EXPRESSION TAG SEQADV 7ZYQ MET A 693 UNP P00533 EXPRESSION TAG SEQADV 7ZYQ ALA A 694 UNP P00533 EXPRESSION TAG SEQADV 7ZYQ MET A 790 UNP P00533 THR 790 ENGINEERED MUTATION SEQADV 7ZYQ ARG A 948 UNP P00533 VAL 948 ENGINEERED MUTATION SEQADV 7ZYQ GLY B 690 UNP P00533 EXPRESSION TAG SEQADV 7ZYQ SER B 691 UNP P00533 EXPRESSION TAG SEQADV 7ZYQ HIS B 692 UNP P00533 EXPRESSION TAG SEQADV 7ZYQ MET B 693 UNP P00533 EXPRESSION TAG SEQADV 7ZYQ ALA B 694 UNP P00533 EXPRESSION TAG SEQADV 7ZYQ MET B 790 UNP P00533 THR 790 ENGINEERED MUTATION SEQADV 7ZYQ ARG B 948 UNP P00533 VAL 948 ENGINEERED MUTATION SEQRES 1 A 333 GLY SER HIS MET ALA SER GLY GLU ALA PRO ASN GLN ALA SEQRES 2 A 333 LEU LEU ARG ILE LEU LYS GLU THR GLU PHE LYS LYS ILE SEQRES 3 A 333 LYS VAL LEU GLY SER GLY ALA PHE GLY THR VAL TYR LYS SEQRES 4 A 333 GLY LEU TRP ILE PRO GLU GLY GLU LYS VAL LYS ILE PRO SEQRES 5 A 333 VAL ALA ILE LYS GLU LEU ARG GLU ALA THR SER PRO LYS SEQRES 6 A 333 ALA ASN LYS GLU ILE LEU ASP GLU ALA TYR VAL MET ALA SEQRES 7 A 333 SER VAL ASP ASN PRO HIS VAL CYS ARG LEU LEU GLY ILE SEQRES 8 A 333 CYS LEU THR SER THR VAL GLN LEU ILE MET GLN LEU MET SEQRES 9 A 333 PRO PHE GLY CYS LEU LEU ASP TYR VAL ARG GLU HIS LYS SEQRES 10 A 333 ASP ASN ILE GLY SER GLN TYR LEU LEU ASN TRP CYS VAL SEQRES 11 A 333 GLN ILE ALA LYS GLY MET ASN TYR LEU GLU ASP ARG ARG SEQRES 12 A 333 LEU VAL HIS ARG ASP LEU ALA ALA ARG ASN VAL LEU VAL SEQRES 13 A 333 LYS THR PRO GLN HIS VAL LYS ILE THR ASP PHE GLY LEU SEQRES 14 A 333 ALA LYS LEU LEU GLY ALA GLU GLU LYS GLU TYR HIS ALA SEQRES 15 A 333 GLU GLY GLY LYS VAL PRO ILE LYS TRP MET ALA LEU GLU SEQRES 16 A 333 SER ILE LEU HIS ARG ILE TYR THR HIS GLN SER ASP VAL SEQRES 17 A 333 TRP SER TYR GLY VAL THR VAL TRP GLU LEU MET THR PHE SEQRES 18 A 333 GLY SER LYS PRO TYR ASP GLY ILE PRO ALA SER GLU ILE SEQRES 19 A 333 SER SER ILE LEU GLU LYS GLY GLU ARG LEU PRO GLN PRO SEQRES 20 A 333 PRO ILE CYS THR ILE ASP VAL TYR MET ILE MET ARG LYS SEQRES 21 A 333 CYS TRP MET ILE ASP ALA ASP SER ARG PRO LYS PHE ARG SEQRES 22 A 333 GLU LEU ILE ILE GLU PHE SER LYS MET ALA ARG ASP PRO SEQRES 23 A 333 GLN ARG TYR LEU VAL ILE GLN GLY ASP GLU ARG MET HIS SEQRES 24 A 333 LEU PRO SER PRO THR ASP SER ASN PHE TYR ARG ALA LEU SEQRES 25 A 333 MET ASP GLU GLU ASP MET ASP ASP VAL VAL ASP ALA ASP SEQRES 26 A 333 GLU TYR LEU ILE PRO GLN GLN GLY SEQRES 1 B 333 GLY SER HIS MET ALA SER GLY GLU ALA PRO ASN GLN ALA SEQRES 2 B 333 LEU LEU ARG ILE LEU LYS GLU THR GLU PHE LYS LYS ILE SEQRES 3 B 333 LYS VAL LEU GLY SER GLY ALA PHE GLY THR VAL TYR LYS SEQRES 4 B 333 GLY LEU TRP ILE PRO GLU GLY GLU LYS VAL LYS ILE PRO SEQRES 5 B 333 VAL ALA ILE LYS GLU LEU ARG GLU ALA THR SER PRO LYS SEQRES 6 B 333 ALA ASN LYS GLU ILE LEU ASP GLU ALA TYR VAL MET ALA SEQRES 7 B 333 SER VAL ASP ASN PRO HIS VAL CYS ARG LEU LEU GLY ILE SEQRES 8 B 333 CYS LEU THR SER THR VAL GLN LEU ILE MET GLN LEU MET SEQRES 9 B 333 PRO PHE GLY CYS LEU LEU ASP TYR VAL ARG GLU HIS LYS SEQRES 10 B 333 ASP ASN ILE GLY SER GLN TYR LEU LEU ASN TRP CYS VAL SEQRES 11 B 333 GLN ILE ALA LYS GLY MET ASN TYR LEU GLU ASP ARG ARG SEQRES 12 B 333 LEU VAL HIS ARG ASP LEU ALA ALA ARG ASN VAL LEU VAL SEQRES 13 B 333 LYS THR PRO GLN HIS VAL LYS ILE THR ASP PHE GLY LEU SEQRES 14 B 333 ALA LYS LEU LEU GLY ALA GLU GLU LYS GLU TYR HIS ALA SEQRES 15 B 333 GLU GLY GLY LYS VAL PRO ILE LYS TRP MET ALA LEU GLU SEQRES 16 B 333 SER ILE LEU HIS ARG ILE TYR THR HIS GLN SER ASP VAL SEQRES 17 B 333 TRP SER TYR GLY VAL THR VAL TRP GLU LEU MET THR PHE SEQRES 18 B 333 GLY SER LYS PRO TYR ASP GLY ILE PRO ALA SER GLU ILE SEQRES 19 B 333 SER SER ILE LEU GLU LYS GLY GLU ARG LEU PRO GLN PRO SEQRES 20 B 333 PRO ILE CYS THR ILE ASP VAL TYR MET ILE MET ARG LYS SEQRES 21 B 333 CYS TRP MET ILE ASP ALA ASP SER ARG PRO LYS PHE ARG SEQRES 22 B 333 GLU LEU ILE ILE GLU PHE SER LYS MET ALA ARG ASP PRO SEQRES 23 B 333 GLN ARG TYR LEU VAL ILE GLN GLY ASP GLU ARG MET HIS SEQRES 24 B 333 LEU PRO SER PRO THR ASP SER ASN PHE TYR ARG ALA LEU SEQRES 25 B 333 MET ASP GLU GLU ASP MET ASP ASP VAL VAL ASP ALA ASP SEQRES 26 B 333 GLU TYR LEU ILE PRO GLN GLN GLY HET V58 A1101 42 HET SO4 A1102 5 HET SO4 A1103 5 HET CL A1104 1 HET CL A1105 1 HET V58 B1101 42 HET SO4 B1102 5 HET SO4 B1103 5 HET NA B1104 1 HETNAM V58 PHENYL 2-[[4-[4-(DIMETHYLAMINO)PIPERIDIN-1-YL]-2- HETNAM 2 V58 METHOXY-PHENYL]AMINO]-4-(1H-INDOL-3-YL)PYRIMIDINE-5- HETNAM 3 V58 CARBOXYLATE HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION FORMUL 3 V58 2(C33 H34 N6 O3) FORMUL 4 SO4 4(O4 S 2-) FORMUL 6 CL 2(CL 1-) FORMUL 11 NA NA 1+ FORMUL 12 HOH *129(H2 O) HELIX 1 AA1 ASN A 700 LEU A 704 5 5 HELIX 2 AA2 LYS A 708 THR A 710 5 3 HELIX 3 AA3 ALA A 755 SER A 768 1 14 HELIX 4 AA4 CYS A 797 HIS A 805 1 9 HELIX 5 AA5 GLY A 810 ARG A 831 1 22 HELIX 6 AA6 ALA A 839 ARG A 841 5 3 HELIX 7 AA7 PRO A 877 MET A 881 5 5 HELIX 8 AA8 ALA A 882 ARG A 889 1 8 HELIX 9 AA9 THR A 892 THR A 909 1 18 HELIX 10 AB1 PRO A 919 SER A 921 5 3 HELIX 11 AB2 GLU A 922 LYS A 929 1 8 HELIX 12 AB3 THR A 940 CYS A 950 1 11 HELIX 13 AB4 ASP A 954 ARG A 958 5 5 HELIX 14 AB5 LYS A 960 ARG A 973 1 14 HELIX 15 AB6 ASP A 974 LEU A 979 1 6 HELIX 16 AB7 ASN B 700 LEU B 704 5 5 HELIX 17 AB8 LYS B 708 THR B 710 5 3 HELIX 18 AB9 LYS B 754 SER B 768 1 15 HELIX 19 AC1 CYS B 797 HIS B 805 1 9 HELIX 20 AC2 GLY B 810 ARG B 831 1 22 HELIX 21 AC3 ALA B 839 ARG B 841 5 3 HELIX 22 AC4 PRO B 877 MET B 881 5 5 HELIX 23 AC5 ALA B 882 ARG B 889 1 8 HELIX 24 AC6 THR B 892 THR B 909 1 18 HELIX 25 AC7 PRO B 919 SER B 921 5 3 HELIX 26 AC8 GLU B 922 LYS B 929 1 8 HELIX 27 AC9 THR B 940 TRP B 951 1 12 HELIX 28 AD1 ASP B 954 ARG B 958 5 5 HELIX 29 AD2 LYS B 960 ARG B 973 1 14 HELIX 30 AD3 ASP B 974 LEU B 979 1 6 SHEET 1 AA1 6 ARG A 705 ILE A 706 0 SHEET 2 AA1 6 GLY A 779 LEU A 782 1 O ILE A 780 N ARG A 705 SHEET 3 AA1 6 VAL A 786 GLN A 791 -1 O ILE A 789 N GLY A 779 SHEET 4 AA1 6 ILE A 740 LEU A 747 -1 N LEU A 747 O VAL A 786 SHEET 5 AA1 6 GLY A 724 TRP A 731 -1 N TYR A 727 O ILE A 744 SHEET 6 AA1 6 PHE A 712 SER A 720 -1 N LYS A 716 O LYS A 728 SHEET 1 AA2 2 VAL A 843 THR A 847 0 SHEET 2 AA2 2 HIS A 850 ILE A 853 -1 O LYS A 852 N LEU A 844 SHEET 1 AA3 6 ARG B 705 ILE B 706 0 SHEET 2 AA3 6 GLY B 779 LEU B 782 1 O ILE B 780 N ARG B 705 SHEET 3 AA3 6 VAL B 786 GLN B 791 -1 O GLN B 787 N CYS B 781 SHEET 4 AA3 6 ILE B 740 LEU B 747 -1 N LYS B 745 O LEU B 788 SHEET 5 AA3 6 GLY B 724 TRP B 731 -1 N THR B 725 O GLU B 746 SHEET 6 AA3 6 PHE B 712 SER B 720 -1 N LYS B 716 O LYS B 728 SHEET 1 AA4 2 VAL B 843 THR B 847 0 SHEET 2 AA4 2 HIS B 850 ILE B 853 -1 O LYS B 852 N LEU B 844 CRYST1 75.890 79.590 89.570 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013177 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012564 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011164 0.00000