HEADER OXIDOREDUCTASE 25-MAY-22 7ZYT TITLE CRYSTAL STRUCTURE OF THE I318T PATHOGENIC VARIANT OF THE HUMAN TITLE 2 DIHYDROLIPOAMIDE DEHYDROGENASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROLIPOYL DEHYDROGENASE, MITOCHONDRIAL; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DIHYDROLIPOAMIDE DEHYDROGENASE,GLYCINE CLEAVAGE SYSTEM L COMPND 5 PROTEIN; COMPND 6 EC: 1.8.1.4; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 OTHER_DETAILS: SEQUENCE OF THE STREP-TAG WITH THE LINKER AMINO ACIDS: COMPND 10 MASWSHPQFEKGALEVLFQGPG SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DLD, GCSL, LAD, PHE3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET52B+ KEYWDS LIPOAMIDE DEHYDROGENASE, PATHOGENIC MUTATION, E3 DEFICIENCY, ALPHA- KEYWDS 2 KETOGLUTARATE DEHYDROGENASE COMPLEX, 2-OXOGLUTARATE DEHYDROGENASE KEYWDS 3 COMPLEX, PYRUVATE DEHYDROGENASE COMPLEX, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR E.NEMES-NIKODEM,E.SZABO,K.R.VASS,F.LENNARTZ,B.NAGY,B.TOROCSIK, AUTHOR 2 M.S.WEISS,V.ADAM-VIZI,A.AMBRUS REVDAT 3 07-FEB-24 7ZYT 1 REMARK REVDAT 2 26-JUL-23 7ZYT 1 JRNL REVDAT 1 14-JUN-23 7ZYT 0 JRNL AUTH E.SZABO,E.NEMES-NIKODEM,K.R.VASS,Z.ZAMBO,E.ZRUPKO, JRNL AUTH 2 B.TOROCSIK,O.OZOHANICS,B.NAGY,A.AMBRUS JRNL TITL STRUCTURAL AND BIOCHEMICAL INVESTIGATION OF SELECTED JRNL TITL 2 PATHOGENIC MUTANTS OF THE HUMAN DIHYDROLIPOAMIDE JRNL TITL 3 DEHYDROGENASE. JRNL REF INT J MOL SCI V. 24 2023 JRNL REFN ESSN 1422-0067 JRNL PMID 37446004 JRNL DOI 10.3390/IJMS241310826 REMARK 2 REMARK 2 RESOLUTION. 2.89 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.89 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.14 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 20213 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.252 REMARK 3 R VALUE (WORKING SET) : 0.250 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1010 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.1400 - 5.5291 0.98 2807 148 0.1947 0.2122 REMARK 3 2 5.5291 - 4.3899 1.00 2774 146 0.2078 0.2427 REMARK 3 3 4.3899 - 3.8354 1.00 2758 144 0.2259 0.2906 REMARK 3 4 3.8354 - 3.4848 0.99 2728 144 0.2959 0.3634 REMARK 3 5 3.4848 - 3.2351 1.00 2739 144 0.3698 0.3925 REMARK 3 6 3.2351 - 3.0445 0.99 2712 143 0.4577 0.5416 REMARK 3 7 3.0445 - 2.8920 0.99 2685 141 0.5493 0.5329 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.660 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 41.830 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 87.28 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 119.3 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT WAS CARRIED OUT USING NCS REMARK 3 TORSION-ANGLE RESTRAINTS REMARK 4 REMARK 4 7ZYT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1292122900. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-OCT-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20384 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.880 REMARK 200 RESOLUTION RANGE LOW (A) : 44.140 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 6.439 REMARK 200 R MERGE (I) : 0.18200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.3700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.88 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.1 REMARK 200 DATA REDUNDANCY IN SHELL : 6.18 REMARK 200 R MERGE FOR SHELL (I) : 2.98400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.570 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 11.7.03; 13.07.2020 REMARK 200 STARTING MODEL: 6I4Q REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM CHLORIDE, 0.1 M BIS REMARK 280 -TRIS (PH 6.7), 29 (V/V)% PEG 3350, CRYO-PROTECTION: 15 AND THEN REMARK 280 30 (V/V)% ETHYLENE GLYCOL IN THE RESERVOIR, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 94.32500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.50000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 94.32500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 29.50000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 C2 BTB B 503 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 ALA A -20 REMARK 465 SER A -19 REMARK 465 TRP A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 PRO A -15 REMARK 465 GLN A -14 REMARK 465 PHE A -13 REMARK 465 GLU A -12 REMARK 465 LYS A -11 REMARK 465 GLY A -10 REMARK 465 ALA A -9 REMARK 465 LEU A -8 REMARK 465 GLU A -7 REMARK 465 VAL A -6 REMARK 465 LEU A -5 REMARK 465 PHE A -4 REMARK 465 GLN A -3 REMARK 465 GLY A -2 REMARK 465 PRO A -1 REMARK 465 GLY A 0 REMARK 465 ALA A 1 REMARK 465 ASP A 2 REMARK 465 MET B -21 REMARK 465 ALA B -20 REMARK 465 SER B -19 REMARK 465 TRP B -18 REMARK 465 SER B -17 REMARK 465 HIS B -16 REMARK 465 PRO B -15 REMARK 465 GLN B -14 REMARK 465 PHE B -13 REMARK 465 GLU B -12 REMARK 465 LYS B -11 REMARK 465 GLY B -10 REMARK 465 ALA B -9 REMARK 465 LEU B -8 REMARK 465 GLU B -7 REMARK 465 VAL B -6 REMARK 465 LEU B -5 REMARK 465 PHE B -4 REMARK 465 GLN B -3 REMARK 465 GLY B -2 REMARK 465 PRO B -1 REMARK 465 GLY B 0 REMARK 465 ALA B 1 REMARK 465 ASP B 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 48 38.01 -141.73 REMARK 500 ALA A 186 35.41 -86.49 REMARK 500 LYS A 248 91.50 -69.23 REMARK 500 ASP A 251 -2.01 -57.40 REMARK 500 ASN A 305 -163.54 -110.61 REMARK 500 TYR A 359 31.55 -87.63 REMARK 500 THR A 400 48.48 -109.24 REMARK 500 ASP A 413 14.89 55.57 REMARK 500 HIS B 67 4.85 -69.28 REMARK 500 SER B 167 -155.32 -120.30 REMARK 500 ALA B 186 36.70 -88.46 REMARK 500 LYS B 238 69.08 -109.63 REMARK 500 ASP B 399 55.82 -119.06 REMARK 500 REMARK 500 REMARK: NULL DBREF 7ZYT A 1 474 UNP P09622 DLDH_HUMAN 36 509 DBREF 7ZYT B 1 474 UNP P09622 DLDH_HUMAN 36 509 SEQADV 7ZYT MET A -21 UNP P09622 INITIATING METHIONINE SEQADV 7ZYT ALA A -20 UNP P09622 EXPRESSION TAG SEQADV 7ZYT SER A -19 UNP P09622 EXPRESSION TAG SEQADV 7ZYT TRP A -18 UNP P09622 EXPRESSION TAG SEQADV 7ZYT SER A -17 UNP P09622 EXPRESSION TAG SEQADV 7ZYT HIS A -16 UNP P09622 EXPRESSION TAG SEQADV 7ZYT PRO A -15 UNP P09622 EXPRESSION TAG SEQADV 7ZYT GLN A -14 UNP P09622 EXPRESSION TAG SEQADV 7ZYT PHE A -13 UNP P09622 EXPRESSION TAG SEQADV 7ZYT GLU A -12 UNP P09622 EXPRESSION TAG SEQADV 7ZYT LYS A -11 UNP P09622 EXPRESSION TAG SEQADV 7ZYT GLY A -10 UNP P09622 EXPRESSION TAG SEQADV 7ZYT ALA A -9 UNP P09622 EXPRESSION TAG SEQADV 7ZYT LEU A -8 UNP P09622 EXPRESSION TAG SEQADV 7ZYT GLU A -7 UNP P09622 EXPRESSION TAG SEQADV 7ZYT VAL A -6 UNP P09622 EXPRESSION TAG SEQADV 7ZYT LEU A -5 UNP P09622 EXPRESSION TAG SEQADV 7ZYT PHE A -4 UNP P09622 EXPRESSION TAG SEQADV 7ZYT GLN A -3 UNP P09622 EXPRESSION TAG SEQADV 7ZYT GLY A -2 UNP P09622 EXPRESSION TAG SEQADV 7ZYT PRO A -1 UNP P09622 EXPRESSION TAG SEQADV 7ZYT GLY A 0 UNP P09622 EXPRESSION TAG SEQADV 7ZYT THR A 318 UNP P09622 ILE 353 ENGINEERED MUTATION SEQADV 7ZYT MET B -21 UNP P09622 INITIATING METHIONINE SEQADV 7ZYT ALA B -20 UNP P09622 EXPRESSION TAG SEQADV 7ZYT SER B -19 UNP P09622 EXPRESSION TAG SEQADV 7ZYT TRP B -18 UNP P09622 EXPRESSION TAG SEQADV 7ZYT SER B -17 UNP P09622 EXPRESSION TAG SEQADV 7ZYT HIS B -16 UNP P09622 EXPRESSION TAG SEQADV 7ZYT PRO B -15 UNP P09622 EXPRESSION TAG SEQADV 7ZYT GLN B -14 UNP P09622 EXPRESSION TAG SEQADV 7ZYT PHE B -13 UNP P09622 EXPRESSION TAG SEQADV 7ZYT GLU B -12 UNP P09622 EXPRESSION TAG SEQADV 7ZYT LYS B -11 UNP P09622 EXPRESSION TAG SEQADV 7ZYT GLY B -10 UNP P09622 EXPRESSION TAG SEQADV 7ZYT ALA B -9 UNP P09622 EXPRESSION TAG SEQADV 7ZYT LEU B -8 UNP P09622 EXPRESSION TAG SEQADV 7ZYT GLU B -7 UNP P09622 EXPRESSION TAG SEQADV 7ZYT VAL B -6 UNP P09622 EXPRESSION TAG SEQADV 7ZYT LEU B -5 UNP P09622 EXPRESSION TAG SEQADV 7ZYT PHE B -4 UNP P09622 EXPRESSION TAG SEQADV 7ZYT GLN B -3 UNP P09622 EXPRESSION TAG SEQADV 7ZYT GLY B -2 UNP P09622 EXPRESSION TAG SEQADV 7ZYT PRO B -1 UNP P09622 EXPRESSION TAG SEQADV 7ZYT GLY B 0 UNP P09622 EXPRESSION TAG SEQADV 7ZYT THR B 318 UNP P09622 ILE 353 ENGINEERED MUTATION SEQRES 1 A 496 MET ALA SER TRP SER HIS PRO GLN PHE GLU LYS GLY ALA SEQRES 2 A 496 LEU GLU VAL LEU PHE GLN GLY PRO GLY ALA ASP GLN PRO SEQRES 3 A 496 ILE ASP ALA ASP VAL THR VAL ILE GLY SER GLY PRO GLY SEQRES 4 A 496 GLY TYR VAL ALA ALA ILE LYS ALA ALA GLN LEU GLY PHE SEQRES 5 A 496 LYS THR VAL CYS ILE GLU LYS ASN GLU THR LEU GLY GLY SEQRES 6 A 496 THR CYS LEU ASN VAL GLY CYS ILE PRO SER LYS ALA LEU SEQRES 7 A 496 LEU ASN ASN SER HIS TYR TYR HIS MET ALA HIS GLY LYS SEQRES 8 A 496 ASP PHE ALA SER ARG GLY ILE GLU MET SER GLU VAL ARG SEQRES 9 A 496 LEU ASN LEU ASP LYS MET MET GLU GLN LYS SER THR ALA SEQRES 10 A 496 VAL LYS ALA LEU THR GLY GLY ILE ALA HIS LEU PHE LYS SEQRES 11 A 496 GLN ASN LYS VAL VAL HIS VAL ASN GLY TYR GLY LYS ILE SEQRES 12 A 496 THR GLY LYS ASN GLN VAL THR ALA THR LYS ALA ASP GLY SEQRES 13 A 496 GLY THR GLN VAL ILE ASP THR LYS ASN ILE LEU ILE ALA SEQRES 14 A 496 THR GLY SER GLU VAL THR PRO PHE PRO GLY ILE THR ILE SEQRES 15 A 496 ASP GLU ASP THR ILE VAL SER SER THR GLY ALA LEU SER SEQRES 16 A 496 LEU LYS LYS VAL PRO GLU LYS MET VAL VAL ILE GLY ALA SEQRES 17 A 496 GLY VAL ILE GLY VAL GLU LEU GLY SER VAL TRP GLN ARG SEQRES 18 A 496 LEU GLY ALA ASP VAL THR ALA VAL GLU PHE LEU GLY HIS SEQRES 19 A 496 VAL GLY GLY VAL GLY ILE ASP MET GLU ILE SER LYS ASN SEQRES 20 A 496 PHE GLN ARG ILE LEU GLN LYS GLN GLY PHE LYS PHE LYS SEQRES 21 A 496 LEU ASN THR LYS VAL THR GLY ALA THR LYS LYS SER ASP SEQRES 22 A 496 GLY LYS ILE ASP VAL SER ILE GLU ALA ALA SER GLY GLY SEQRES 23 A 496 LYS ALA GLU VAL ILE THR CYS ASP VAL LEU LEU VAL CYS SEQRES 24 A 496 ILE GLY ARG ARG PRO PHE THR LYS ASN LEU GLY LEU GLU SEQRES 25 A 496 GLU LEU GLY ILE GLU LEU ASP PRO ARG GLY ARG ILE PRO SEQRES 26 A 496 VAL ASN THR ARG PHE GLN THR LYS ILE PRO ASN ILE TYR SEQRES 27 A 496 ALA THR GLY ASP VAL VAL ALA GLY PRO MET LEU ALA HIS SEQRES 28 A 496 LYS ALA GLU ASP GLU GLY ILE ILE CYS VAL GLU GLY MET SEQRES 29 A 496 ALA GLY GLY ALA VAL HIS ILE ASP TYR ASN CYS VAL PRO SEQRES 30 A 496 SER VAL ILE TYR THR HIS PRO GLU VAL ALA TRP VAL GLY SEQRES 31 A 496 LYS SER GLU GLU GLN LEU LYS GLU GLU GLY ILE GLU TYR SEQRES 32 A 496 LYS VAL GLY LYS PHE PRO PHE ALA ALA ASN SER ARG ALA SEQRES 33 A 496 LYS THR ASN ALA ASP THR ASP GLY MET VAL LYS ILE LEU SEQRES 34 A 496 GLY GLN LYS SER THR ASP ARG VAL LEU GLY ALA HIS ILE SEQRES 35 A 496 LEU GLY PRO GLY ALA GLY GLU MET VAL ASN GLU ALA ALA SEQRES 36 A 496 LEU ALA LEU GLU TYR GLY ALA SER CYS GLU ASP ILE ALA SEQRES 37 A 496 ARG VAL CYS HIS ALA HIS PRO THR LEU SER GLU ALA PHE SEQRES 38 A 496 ARG GLU ALA ASN LEU ALA ALA SER PHE GLY LYS SER ILE SEQRES 39 A 496 ASN PHE SEQRES 1 B 496 MET ALA SER TRP SER HIS PRO GLN PHE GLU LYS GLY ALA SEQRES 2 B 496 LEU GLU VAL LEU PHE GLN GLY PRO GLY ALA ASP GLN PRO SEQRES 3 B 496 ILE ASP ALA ASP VAL THR VAL ILE GLY SER GLY PRO GLY SEQRES 4 B 496 GLY TYR VAL ALA ALA ILE LYS ALA ALA GLN LEU GLY PHE SEQRES 5 B 496 LYS THR VAL CYS ILE GLU LYS ASN GLU THR LEU GLY GLY SEQRES 6 B 496 THR CYS LEU ASN VAL GLY CYS ILE PRO SER LYS ALA LEU SEQRES 7 B 496 LEU ASN ASN SER HIS TYR TYR HIS MET ALA HIS GLY LYS SEQRES 8 B 496 ASP PHE ALA SER ARG GLY ILE GLU MET SER GLU VAL ARG SEQRES 9 B 496 LEU ASN LEU ASP LYS MET MET GLU GLN LYS SER THR ALA SEQRES 10 B 496 VAL LYS ALA LEU THR GLY GLY ILE ALA HIS LEU PHE LYS SEQRES 11 B 496 GLN ASN LYS VAL VAL HIS VAL ASN GLY TYR GLY LYS ILE SEQRES 12 B 496 THR GLY LYS ASN GLN VAL THR ALA THR LYS ALA ASP GLY SEQRES 13 B 496 GLY THR GLN VAL ILE ASP THR LYS ASN ILE LEU ILE ALA SEQRES 14 B 496 THR GLY SER GLU VAL THR PRO PHE PRO GLY ILE THR ILE SEQRES 15 B 496 ASP GLU ASP THR ILE VAL SER SER THR GLY ALA LEU SER SEQRES 16 B 496 LEU LYS LYS VAL PRO GLU LYS MET VAL VAL ILE GLY ALA SEQRES 17 B 496 GLY VAL ILE GLY VAL GLU LEU GLY SER VAL TRP GLN ARG SEQRES 18 B 496 LEU GLY ALA ASP VAL THR ALA VAL GLU PHE LEU GLY HIS SEQRES 19 B 496 VAL GLY GLY VAL GLY ILE ASP MET GLU ILE SER LYS ASN SEQRES 20 B 496 PHE GLN ARG ILE LEU GLN LYS GLN GLY PHE LYS PHE LYS SEQRES 21 B 496 LEU ASN THR LYS VAL THR GLY ALA THR LYS LYS SER ASP SEQRES 22 B 496 GLY LYS ILE ASP VAL SER ILE GLU ALA ALA SER GLY GLY SEQRES 23 B 496 LYS ALA GLU VAL ILE THR CYS ASP VAL LEU LEU VAL CYS SEQRES 24 B 496 ILE GLY ARG ARG PRO PHE THR LYS ASN LEU GLY LEU GLU SEQRES 25 B 496 GLU LEU GLY ILE GLU LEU ASP PRO ARG GLY ARG ILE PRO SEQRES 26 B 496 VAL ASN THR ARG PHE GLN THR LYS ILE PRO ASN ILE TYR SEQRES 27 B 496 ALA THR GLY ASP VAL VAL ALA GLY PRO MET LEU ALA HIS SEQRES 28 B 496 LYS ALA GLU ASP GLU GLY ILE ILE CYS VAL GLU GLY MET SEQRES 29 B 496 ALA GLY GLY ALA VAL HIS ILE ASP TYR ASN CYS VAL PRO SEQRES 30 B 496 SER VAL ILE TYR THR HIS PRO GLU VAL ALA TRP VAL GLY SEQRES 31 B 496 LYS SER GLU GLU GLN LEU LYS GLU GLU GLY ILE GLU TYR SEQRES 32 B 496 LYS VAL GLY LYS PHE PRO PHE ALA ALA ASN SER ARG ALA SEQRES 33 B 496 LYS THR ASN ALA ASP THR ASP GLY MET VAL LYS ILE LEU SEQRES 34 B 496 GLY GLN LYS SER THR ASP ARG VAL LEU GLY ALA HIS ILE SEQRES 35 B 496 LEU GLY PRO GLY ALA GLY GLU MET VAL ASN GLU ALA ALA SEQRES 36 B 496 LEU ALA LEU GLU TYR GLY ALA SER CYS GLU ASP ILE ALA SEQRES 37 B 496 ARG VAL CYS HIS ALA HIS PRO THR LEU SER GLU ALA PHE SEQRES 38 B 496 ARG GLU ALA ASN LEU ALA ALA SER PHE GLY LYS SER ILE SEQRES 39 B 496 ASN PHE HET FAD A 501 53 HET BTB A 502 14 HET FAD B 501 53 HET EDO B 502 4 HET BTB B 503 14 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM BTB 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL- HETNAM 2 BTB PROPANE-1,3-DIOL HETNAM EDO 1,2-ETHANEDIOL HETSYN BTB BIS-TRIS BUFFER HETSYN EDO ETHYLENE GLYCOL FORMUL 3 FAD 2(C27 H33 N9 O15 P2) FORMUL 4 BTB 2(C8 H19 N O5) FORMUL 6 EDO C2 H6 O2 HELIX 1 AA1 GLY A 15 LEU A 28 1 14 HELIX 2 AA2 GLY A 42 VAL A 48 1 7 HELIX 3 AA3 GLY A 49 GLY A 68 1 20 HELIX 4 AA4 GLY A 68 ARG A 74 1 7 HELIX 5 AA5 ASN A 84 ASN A 110 1 27 HELIX 6 AA6 SER A 167 LEU A 172 1 6 HELIX 7 AA7 GLY A 187 LEU A 200 1 14 HELIX 8 AA8 ASP A 219 GLN A 233 1 15 HELIX 9 AA9 LEU A 327 ALA A 343 1 17 HELIX 10 AB1 ASP A 350 VAL A 354 5 5 HELIX 11 AB2 SER A 370 GLU A 377 1 8 HELIX 12 AB3 ASN A 391 ALA A 398 1 8 HELIX 13 AB4 GLY A 424 TYR A 438 1 15 HELIX 14 AB5 SER A 441 ARG A 447 1 7 HELIX 15 AB6 LEU A 455 PHE A 468 1 14 HELIX 16 AB7 GLY B 15 LEU B 28 1 14 HELIX 17 AB8 GLY B 42 GLY B 49 1 8 HELIX 18 AB9 GLY B 49 HIS B 67 1 19 HELIX 19 AC1 LYS B 69 ARG B 74 1 6 HELIX 20 AC2 ASN B 84 ASN B 110 1 27 HELIX 21 AC3 SER B 167 LEU B 172 1 6 HELIX 22 AC4 GLY B 187 LEU B 200 1 14 HELIX 23 AC5 ASP B 219 GLN B 233 1 15 HELIX 24 AC6 GLY B 288 GLY B 293 1 6 HELIX 25 AC7 LEU B 327 ALA B 343 1 17 HELIX 26 AC8 SER B 370 GLU B 377 1 8 HELIX 27 AC9 ASN B 391 ALA B 398 1 8 HELIX 28 AD1 GLY B 424 TYR B 438 1 15 HELIX 29 AD2 SER B 441 ARG B 447 1 7 HELIX 30 AD3 LEU B 455 PHE B 468 1 14 SHEET 1 AA1 6 VAL A 113 ASN A 116 0 SHEET 2 AA1 6 THR A 32 GLU A 36 1 N CYS A 34 O VAL A 113 SHEET 3 AA1 6 ILE A 5 ILE A 12 1 N VAL A 11 O VAL A 33 SHEET 4 AA1 6 THR A 136 ILE A 146 1 O ASP A 140 N ILE A 5 SHEET 5 AA1 6 GLN A 126 THR A 130 -1 N VAL A 127 O ILE A 139 SHEET 6 AA1 6 TYR A 118 GLY A 123 -1 N GLY A 123 O GLN A 126 SHEET 1 AA2 5 VAL A 113 ASN A 116 0 SHEET 2 AA2 5 THR A 32 GLU A 36 1 N CYS A 34 O VAL A 113 SHEET 3 AA2 5 ILE A 5 ILE A 12 1 N VAL A 11 O VAL A 33 SHEET 4 AA2 5 THR A 136 ILE A 146 1 O ASP A 140 N ILE A 5 SHEET 5 AA2 5 ILE A 315 ALA A 317 1 O TYR A 316 N ILE A 144 SHEET 1 AA3 2 ILE A 76 SER A 79 0 SHEET 2 AA3 2 GLU B 80 LEU B 83 -1 O ARG B 82 N GLU A 77 SHEET 1 AA4 2 ARG A 82 LEU A 83 0 SHEET 2 AA4 2 ILE B 76 GLU B 77 -1 O GLU B 77 N ARG A 82 SHEET 1 AA5 2 SER A 150 VAL A 152 0 SHEET 2 AA5 2 ARG A 280 PRO A 282 -1 O ARG A 281 N GLU A 151 SHEET 1 AA6 5 ILE A 165 VAL A 166 0 SHEET 2 AA6 5 VAL A 273 VAL A 276 1 O LEU A 274 N VAL A 166 SHEET 3 AA6 5 MET A 181 ILE A 184 1 N ILE A 184 O LEU A 275 SHEET 4 AA6 5 VAL A 204 VAL A 207 1 O VAL A 207 N VAL A 183 SHEET 5 AA6 5 LYS A 236 LYS A 238 1 O LYS A 238 N ALA A 206 SHEET 1 AA7 3 THR A 241 LYS A 248 0 SHEET 2 AA7 3 ILE A 254 ALA A 260 -1 O GLU A 259 N LYS A 242 SHEET 3 AA7 3 ALA A 266 CYS A 271 -1 O ILE A 269 N VAL A 256 SHEET 1 AA8 5 SER A 356 ILE A 358 0 SHEET 2 AA8 5 GLU A 363 GLY A 368 -1 O VAL A 364 N ILE A 358 SHEET 3 AA8 5 VAL A 415 GLY A 422 -1 O GLY A 422 N GLU A 363 SHEET 4 AA8 5 MET A 403 GLN A 409 -1 N LYS A 405 O HIS A 419 SHEET 5 AA8 5 TYR A 381 PRO A 387 -1 N GLY A 384 O ILE A 406 SHEET 1 AA9 6 VAL B 113 ASN B 116 0 SHEET 2 AA9 6 THR B 32 GLU B 36 1 N CYS B 34 O VAL B 113 SHEET 3 AA9 6 PRO B 4 ILE B 12 1 N VAL B 11 O VAL B 33 SHEET 4 AA9 6 GLN B 137 ILE B 146 1 O LEU B 145 N ILE B 12 SHEET 5 AA9 6 GLN B 126 THR B 130 -1 N VAL B 127 O ILE B 139 SHEET 6 AA9 6 TYR B 118 GLY B 123 -1 N GLY B 123 O GLN B 126 SHEET 1 AB1 5 VAL B 113 ASN B 116 0 SHEET 2 AB1 5 THR B 32 GLU B 36 1 N CYS B 34 O VAL B 113 SHEET 3 AB1 5 PRO B 4 ILE B 12 1 N VAL B 11 O VAL B 33 SHEET 4 AB1 5 GLN B 137 ILE B 146 1 O LEU B 145 N ILE B 12 SHEET 5 AB1 5 ILE B 315 ALA B 317 1 O TYR B 316 N ILE B 144 SHEET 1 AB2 2 SER B 150 VAL B 152 0 SHEET 2 AB2 2 ARG B 280 PRO B 282 -1 O ARG B 281 N GLU B 151 SHEET 1 AB3 5 ILE B 165 VAL B 166 0 SHEET 2 AB3 5 VAL B 273 VAL B 276 1 O VAL B 276 N VAL B 166 SHEET 3 AB3 5 LYS B 180 ILE B 184 1 N ILE B 184 O LEU B 275 SHEET 4 AB3 5 ASP B 203 GLU B 208 1 O THR B 205 N VAL B 183 SHEET 5 AB3 5 LYS B 236 LEU B 239 1 O LYS B 238 N ALA B 206 SHEET 1 AB4 3 THR B 241 LYS B 248 0 SHEET 2 AB4 3 ILE B 254 ALA B 260 -1 O SER B 257 N THR B 244 SHEET 3 AB4 3 GLU B 267 CYS B 271 -1 O ILE B 269 N VAL B 256 SHEET 1 AB5 5 SER B 356 ILE B 358 0 SHEET 2 AB5 5 GLU B 363 GLY B 368 -1 O VAL B 364 N ILE B 358 SHEET 3 AB5 5 VAL B 415 GLY B 422 -1 O ALA B 418 N VAL B 367 SHEET 4 AB5 5 MET B 403 GLN B 409 -1 N LEU B 407 O LEU B 416 SHEET 5 AB5 5 TYR B 381 PRO B 387 -1 N LYS B 382 O GLY B 408 SSBOND 1 CYS A 45 CYS A 50 1555 1555 2.04 SSBOND 2 CYS B 45 CYS B 50 1555 1555 2.03 CISPEP 1 HIS A 361 PRO A 362 0 10.91 CISPEP 2 HIS A 452 PRO A 453 0 -3.72 CISPEP 3 HIS B 361 PRO B 362 0 2.72 CISPEP 4 HIS B 452 PRO B 453 0 -6.73 CRYST1 188.650 59.000 83.230 90.00 101.40 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005301 0.000000 0.001069 0.00000 SCALE2 0.000000 0.016949 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012257 0.00000