HEADER PROTEIN FIBRIL 26-MAY-22 7ZZV TITLE PROSTATIC ACID PHOSPHATASE (PAP) FRAGMENT (85-120) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROSTATIC ACID PHOSPHATASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PAP,5'-NUCLEOTIDASE,5'-NT,ACID PHOSPHATASE 3,ECTO-5'- COMPND 5 NUCLEOTIDASE,PROTEIN TYROSINE PHOSPHATASE ACP3,THIAMINE COMPND 6 MONOPHOSPHATASE,TMPASE; COMPND 7 EC: 3.1.3.2,3.1.3.5,3.1.3.48; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_COMMON: HUMAN; SOURCE 5 ORGANISM_TAXID: 9606 KEYWDS HIV INFECTION; NMR SPECTROSCOPY; PROSTATIC ACID PHOSPHATASE; SPATIAL KEYWDS 2 STRUCTURE, PROTEIN FIBRIL EXPDTA SOLUTION NMR NUMMDL 18 AUTHOR D.S.BLOKHIN,A.R.YULMETOV,A.M.KUSOVA,P.V.SKVORTSOVA REVDAT 3 19-JUN-24 7ZZV 1 REMARK REVDAT 2 14-JUN-23 7ZZV 1 REMARK REVDAT 1 15-JUN-22 7ZZV 0 JRNL AUTH D.S.BLOKHIN,A.R.YULMETOV,A.M.KUSOVA,P.V.SKVORTSOVA, JRNL AUTH 2 T.A.MUKHAMETZYANOV,V.V.KLOCHKOV JRNL TITL STRUCTURE OF AMYLOIDOGENIC PAP(85-120) PEPTIDE BY JRNL TITL 2 HIGH-RESOLUTION NMR SPECTROSCOPY JRNL REF JOURNAL OF MOLECULAR V.1253 2022 JRNL REF 2 STRUCTURE JRNL REFN ISSN 00222860 JRNL DOI 10.1016/J.MOLSTRUC.2021.132294 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ZZV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1292123359. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 3.0 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.8 MM PAP85_120, 90% H2O/10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H TOCSY; 2D 1H-13C HSQC; REMARK 210 2D 1H-15N HSQC; 2D 1H-13C HMBC; REMARK 210 2D 1H-1H NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN, CCPNMR ANALYSIS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 18 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH ACCEPTABLE REMARK 210 COVALENT GEOMETRY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 3120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 87 47.15 -94.35 REMARK 500 1 ALA A 116 117.74 -176.20 REMARK 500 1 ASN A 119 -32.26 -138.21 REMARK 500 2 LYS A 87 44.79 -99.65 REMARK 500 2 ALA A 116 147.87 -173.03 REMARK 500 2 MET A 117 -71.48 -69.25 REMARK 500 3 LYS A 87 56.71 -101.83 REMARK 500 3 GLN A 101 45.64 -105.64 REMARK 500 3 ALA A 116 143.22 -175.21 REMARK 500 3 ASN A 119 57.00 -151.53 REMARK 500 4 TYR A 89 99.94 -65.19 REMARK 500 4 LYS A 91 -77.90 -66.11 REMARK 500 4 ASN A 94 150.53 -44.83 REMARK 500 4 GLU A 100 -96.27 -141.50 REMARK 500 4 GLN A 101 24.32 -144.77 REMARK 500 4 SER A 115 104.20 -48.89 REMARK 500 5 LYS A 87 32.47 -92.99 REMARK 500 5 ARG A 88 67.17 76.34 REMARK 500 5 GLN A 101 56.16 -111.73 REMARK 500 5 MET A 114 -174.44 -63.64 REMARK 500 5 MET A 117 -62.86 -137.49 REMARK 500 6 MET A 117 -73.54 -65.08 REMARK 500 6 ASN A 119 85.19 -154.27 REMARK 500 7 ASN A 94 150.80 -47.86 REMARK 500 7 GLU A 100 -91.32 -128.95 REMARK 500 7 GLN A 101 31.85 -155.54 REMARK 500 7 SER A 115 104.50 -50.44 REMARK 500 7 ALA A 116 127.60 -177.54 REMARK 500 9 LYS A 87 45.04 -93.98 REMARK 500 9 SER A 96 -177.43 -175.72 REMARK 500 9 GLN A 101 58.58 -106.92 REMARK 500 9 ALA A 116 124.13 -175.85 REMARK 500 10 ASN A 94 161.17 -48.01 REMARK 500 10 SER A 96 -170.56 -175.41 REMARK 500 10 MET A 117 -74.12 -76.06 REMARK 500 11 GLN A 101 46.38 -80.17 REMARK 500 11 SER A 115 74.32 51.84 REMARK 500 11 MET A 117 -61.17 -145.82 REMARK 500 11 ASN A 119 107.40 -169.69 REMARK 500 12 LYS A 87 50.88 -106.58 REMARK 500 12 GLN A 101 51.81 -118.91 REMARK 500 12 ALA A 116 127.58 -176.36 REMARK 500 13 SER A 115 109.32 -47.76 REMARK 500 13 ALA A 116 125.21 -175.56 REMARK 500 13 ASN A 119 110.63 -167.62 REMARK 500 14 LYS A 87 59.61 -112.63 REMARK 500 14 LYS A 98 -95.34 -115.74 REMARK 500 14 HIS A 99 20.49 -148.92 REMARK 500 15 PHE A 92 -32.47 -131.76 REMARK 500 15 GLU A 100 -164.57 -104.41 REMARK 500 REMARK 500 THIS ENTRY HAS 64 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 51231 RELATED DB: BMRB DBREF 7ZZV A 85 120 UNP P15309 PPAP_HUMAN 85 120 SEQRES 1 A 36 ILE ARG LYS ARG TYR ARG LYS PHE LEU ASN GLU SER TYR SEQRES 2 A 36 LYS HIS GLU GLN VAL TYR ILE ARG SER THR ASP VAL ASP SEQRES 3 A 36 ARG THR LEU MET SER ALA MET THR ASN LEU HELIX 1 AA1 VAL A 102 ASP A 110 1 9 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1